Multiple sequence alignment - TraesCS4B01G066600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G066600 chr4B 100.000 3730 0 0 1 3730 59588335 59592064 0.000000e+00 6889.0
1 TraesCS4B01G066600 chr4B 84.549 233 32 3 524 755 593430659 593430430 1.040000e-55 228.0
2 TraesCS4B01G066600 chr4B 84.375 192 20 10 524 710 395611240 395611426 2.960000e-41 180.0
3 TraesCS4B01G066600 chr4D 93.936 2820 122 22 932 3730 40651567 40654358 0.000000e+00 4215.0
4 TraesCS4B01G066600 chr4D 80.798 401 44 19 126 522 40651170 40651541 2.190000e-72 283.0
5 TraesCS4B01G066600 chr4D 81.746 252 42 2 526 776 356524965 356524717 1.360000e-49 207.0
6 TraesCS4B01G066600 chr4D 83.938 193 26 5 526 715 7709673 7709483 2.960000e-41 180.0
7 TraesCS4B01G066600 chr4A 94.880 2656 117 12 1085 3730 559049887 559047241 0.000000e+00 4133.0
8 TraesCS4B01G066600 chr2D 81.712 257 41 5 526 781 284693806 284694057 3.780000e-50 209.0
9 TraesCS4B01G066600 chr7A 86.224 196 21 5 523 716 236321181 236320990 1.360000e-49 207.0
10 TraesCS4B01G066600 chr6D 81.226 261 40 7 524 781 37643493 37643239 6.320000e-48 202.0
11 TraesCS4B01G066600 chr3A 84.375 192 27 2 523 714 417934735 417934923 6.360000e-43 185.0
12 TraesCS4B01G066600 chr2A 84.699 183 24 4 524 704 430236 430416 2.960000e-41 180.0
13 TraesCS4B01G066600 chr2B 85.714 77 11 0 777 853 527294310 527294386 8.590000e-12 82.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G066600 chr4B 59588335 59592064 3729 False 6889 6889 100.000 1 3730 1 chr4B.!!$F1 3729
1 TraesCS4B01G066600 chr4D 40651170 40654358 3188 False 2249 4215 87.367 126 3730 2 chr4D.!!$F1 3604
2 TraesCS4B01G066600 chr4A 559047241 559049887 2646 True 4133 4133 94.880 1085 3730 1 chr4A.!!$R1 2645

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
832 842 0.033920 TGCGACTCACAGAGCATGTT 59.966 50.0 0.0 0.0 41.41 2.71 F
852 862 0.471211 TAGGATTACCAGGCTCGGGG 60.471 60.0 7.7 0.0 38.94 5.73 F
875 885 0.676151 GGTCTCACTACGTCGGGTCT 60.676 60.0 0.0 0.0 0.00 3.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2604 2632 1.047801 GGTGGTGTTTTGGGCTTCAT 58.952 50.000 0.00 0.0 0.0 2.57 R
2713 2742 3.181487 ACAGCAATTATTCCCGCATCAAC 60.181 43.478 0.00 0.0 0.0 3.18 R
2894 2923 0.249120 CCGAACATGTGTAGGCCTGA 59.751 55.000 17.99 0.0 0.0 3.86 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 3.847671 GCTAAGTCCCCATTTAGCTCT 57.152 47.619 8.54 0.00 45.15 4.09
24 25 4.157849 GCTAAGTCCCCATTTAGCTCTT 57.842 45.455 8.54 0.00 45.15 2.85
25 26 3.879892 GCTAAGTCCCCATTTAGCTCTTG 59.120 47.826 8.54 0.00 45.15 3.02
26 27 4.384208 GCTAAGTCCCCATTTAGCTCTTGA 60.384 45.833 8.54 0.00 45.15 3.02
27 28 4.870021 AAGTCCCCATTTAGCTCTTGAT 57.130 40.909 0.00 0.00 0.00 2.57
28 29 5.975988 AAGTCCCCATTTAGCTCTTGATA 57.024 39.130 0.00 0.00 0.00 2.15
29 30 6.521527 AAGTCCCCATTTAGCTCTTGATAT 57.478 37.500 0.00 0.00 0.00 1.63
30 31 6.521527 AGTCCCCATTTAGCTCTTGATATT 57.478 37.500 0.00 0.00 0.00 1.28
31 32 6.915786 AGTCCCCATTTAGCTCTTGATATTT 58.084 36.000 0.00 0.00 0.00 1.40
32 33 7.001073 AGTCCCCATTTAGCTCTTGATATTTC 58.999 38.462 0.00 0.00 0.00 2.17
33 34 7.001073 GTCCCCATTTAGCTCTTGATATTTCT 58.999 38.462 0.00 0.00 0.00 2.52
34 35 7.174080 GTCCCCATTTAGCTCTTGATATTTCTC 59.826 40.741 0.00 0.00 0.00 2.87
35 36 6.432472 CCCCATTTAGCTCTTGATATTTCTCC 59.568 42.308 0.00 0.00 0.00 3.71
36 37 7.230027 CCCATTTAGCTCTTGATATTTCTCCT 58.770 38.462 0.00 0.00 0.00 3.69
37 38 7.723172 CCCATTTAGCTCTTGATATTTCTCCTT 59.277 37.037 0.00 0.00 0.00 3.36
38 39 9.129532 CCATTTAGCTCTTGATATTTCTCCTTT 57.870 33.333 0.00 0.00 0.00 3.11
41 42 8.511604 TTAGCTCTTGATATTTCTCCTTTTGG 57.488 34.615 0.00 0.00 42.21 3.28
42 43 5.890419 AGCTCTTGATATTTCTCCTTTTGGG 59.110 40.000 0.00 0.00 40.87 4.12
43 44 5.888161 GCTCTTGATATTTCTCCTTTTGGGA 59.112 40.000 0.00 0.00 42.77 4.37
44 45 6.183360 GCTCTTGATATTTCTCCTTTTGGGAC 60.183 42.308 0.00 0.00 39.58 4.46
45 46 6.789268 TCTTGATATTTCTCCTTTTGGGACA 58.211 36.000 0.00 0.00 39.58 4.02
46 47 6.659242 TCTTGATATTTCTCCTTTTGGGACAC 59.341 38.462 0.00 0.00 39.29 3.67
47 48 6.139679 TGATATTTCTCCTTTTGGGACACT 57.860 37.500 0.00 0.00 39.29 3.55
48 49 7.265599 TGATATTTCTCCTTTTGGGACACTA 57.734 36.000 0.00 0.00 39.29 2.74
49 50 7.110155 TGATATTTCTCCTTTTGGGACACTAC 58.890 38.462 0.00 0.00 39.29 2.73
50 51 3.782656 TTCTCCTTTTGGGACACTACC 57.217 47.619 0.00 0.00 39.29 3.18
51 52 2.696775 TCTCCTTTTGGGACACTACCA 58.303 47.619 0.00 0.00 39.29 3.25
52 53 3.256704 TCTCCTTTTGGGACACTACCAT 58.743 45.455 0.00 0.00 39.29 3.55
53 54 3.263425 TCTCCTTTTGGGACACTACCATC 59.737 47.826 0.00 0.00 39.29 3.51
54 55 2.307686 TCCTTTTGGGACACTACCATCC 59.692 50.000 0.00 0.00 39.29 3.51
55 56 2.041081 CCTTTTGGGACACTACCATCCA 59.959 50.000 0.00 0.00 39.29 3.41
56 57 3.309121 CCTTTTGGGACACTACCATCCAT 60.309 47.826 0.00 0.00 39.29 3.41
57 58 4.080015 CCTTTTGGGACACTACCATCCATA 60.080 45.833 0.00 0.00 39.29 2.74
58 59 4.497291 TTTGGGACACTACCATCCATAC 57.503 45.455 0.00 0.00 39.29 2.39
59 60 3.414759 TGGGACACTACCATCCATACT 57.585 47.619 0.00 0.00 36.65 2.12
60 61 3.731431 TGGGACACTACCATCCATACTT 58.269 45.455 0.00 0.00 36.65 2.24
61 62 4.108570 TGGGACACTACCATCCATACTTT 58.891 43.478 0.00 0.00 36.65 2.66
62 63 5.282129 TGGGACACTACCATCCATACTTTA 58.718 41.667 0.00 0.00 36.65 1.85
63 64 5.908831 TGGGACACTACCATCCATACTTTAT 59.091 40.000 0.00 0.00 36.65 1.40
64 65 6.388689 TGGGACACTACCATCCATACTTTATT 59.611 38.462 0.00 0.00 36.65 1.40
65 66 7.092174 TGGGACACTACCATCCATACTTTATTT 60.092 37.037 0.00 0.00 36.65 1.40
66 67 7.444487 GGGACACTACCATCCATACTTTATTTC 59.556 40.741 0.00 0.00 36.65 2.17
67 68 7.990886 GGACACTACCATCCATACTTTATTTCA 59.009 37.037 0.00 0.00 34.87 2.69
68 69 8.732746 ACACTACCATCCATACTTTATTTCAC 57.267 34.615 0.00 0.00 0.00 3.18
69 70 7.773690 ACACTACCATCCATACTTTATTTCACC 59.226 37.037 0.00 0.00 0.00 4.02
70 71 7.993183 CACTACCATCCATACTTTATTTCACCT 59.007 37.037 0.00 0.00 0.00 4.00
71 72 8.557450 ACTACCATCCATACTTTATTTCACCTT 58.443 33.333 0.00 0.00 0.00 3.50
72 73 9.408648 CTACCATCCATACTTTATTTCACCTTT 57.591 33.333 0.00 0.00 0.00 3.11
73 74 8.066612 ACCATCCATACTTTATTTCACCTTTG 57.933 34.615 0.00 0.00 0.00 2.77
74 75 6.980397 CCATCCATACTTTATTTCACCTTTGC 59.020 38.462 0.00 0.00 0.00 3.68
75 76 7.147846 CCATCCATACTTTATTTCACCTTTGCT 60.148 37.037 0.00 0.00 0.00 3.91
76 77 7.775053 TCCATACTTTATTTCACCTTTGCTT 57.225 32.000 0.00 0.00 0.00 3.91
77 78 7.601856 TCCATACTTTATTTCACCTTTGCTTG 58.398 34.615 0.00 0.00 0.00 4.01
78 79 7.232534 TCCATACTTTATTTCACCTTTGCTTGT 59.767 33.333 0.00 0.00 0.00 3.16
79 80 7.542130 CCATACTTTATTTCACCTTTGCTTGTC 59.458 37.037 0.00 0.00 0.00 3.18
80 81 6.463995 ACTTTATTTCACCTTTGCTTGTCA 57.536 33.333 0.00 0.00 0.00 3.58
81 82 6.872920 ACTTTATTTCACCTTTGCTTGTCAA 58.127 32.000 0.00 0.00 0.00 3.18
82 83 7.500141 ACTTTATTTCACCTTTGCTTGTCAAT 58.500 30.769 0.00 0.00 34.12 2.57
83 84 7.439056 ACTTTATTTCACCTTTGCTTGTCAATG 59.561 33.333 0.00 0.00 34.12 2.82
84 85 4.998671 TTTCACCTTTGCTTGTCAATGA 57.001 36.364 0.00 0.00 34.12 2.57
85 86 5.534207 TTTCACCTTTGCTTGTCAATGAT 57.466 34.783 0.00 0.00 34.12 2.45
86 87 4.508461 TCACCTTTGCTTGTCAATGATG 57.492 40.909 0.00 0.00 34.12 3.07
87 88 3.890756 TCACCTTTGCTTGTCAATGATGT 59.109 39.130 0.00 0.00 34.12 3.06
88 89 4.022935 TCACCTTTGCTTGTCAATGATGTC 60.023 41.667 0.00 0.00 34.12 3.06
89 90 4.022589 CACCTTTGCTTGTCAATGATGTCT 60.023 41.667 0.00 0.00 34.12 3.41
90 91 4.217118 ACCTTTGCTTGTCAATGATGTCTC 59.783 41.667 0.00 0.00 34.12 3.36
91 92 4.400845 CTTTGCTTGTCAATGATGTCTCG 58.599 43.478 0.00 0.00 34.12 4.04
92 93 3.317603 TGCTTGTCAATGATGTCTCGA 57.682 42.857 0.00 0.00 0.00 4.04
93 94 3.865446 TGCTTGTCAATGATGTCTCGAT 58.135 40.909 0.00 0.00 0.00 3.59
94 95 3.867493 TGCTTGTCAATGATGTCTCGATC 59.133 43.478 0.00 0.00 0.00 3.69
95 96 4.118410 GCTTGTCAATGATGTCTCGATCT 58.882 43.478 0.00 0.00 0.00 2.75
96 97 4.569966 GCTTGTCAATGATGTCTCGATCTT 59.430 41.667 0.00 0.00 0.00 2.40
97 98 5.502058 GCTTGTCAATGATGTCTCGATCTTG 60.502 44.000 0.00 0.00 0.00 3.02
98 99 5.077134 TGTCAATGATGTCTCGATCTTGT 57.923 39.130 0.00 0.00 0.00 3.16
99 100 4.866486 TGTCAATGATGTCTCGATCTTGTG 59.134 41.667 0.00 0.00 0.00 3.33
100 101 5.105063 GTCAATGATGTCTCGATCTTGTGA 58.895 41.667 0.00 0.00 0.00 3.58
101 102 5.752472 GTCAATGATGTCTCGATCTTGTGAT 59.248 40.000 0.00 0.00 35.26 3.06
102 103 5.751990 TCAATGATGTCTCGATCTTGTGATG 59.248 40.000 0.00 0.00 32.19 3.07
103 104 4.989279 TGATGTCTCGATCTTGTGATGA 57.011 40.909 0.00 0.00 32.19 2.92
104 105 5.329035 TGATGTCTCGATCTTGTGATGAA 57.671 39.130 0.00 0.00 32.19 2.57
105 106 5.910614 TGATGTCTCGATCTTGTGATGAAT 58.089 37.500 0.00 0.00 32.19 2.57
106 107 7.042797 TGATGTCTCGATCTTGTGATGAATA 57.957 36.000 0.00 0.00 32.19 1.75
107 108 7.491682 TGATGTCTCGATCTTGTGATGAATAA 58.508 34.615 0.00 0.00 32.19 1.40
108 109 7.981225 TGATGTCTCGATCTTGTGATGAATAAA 59.019 33.333 0.00 0.00 32.19 1.40
109 110 7.761651 TGTCTCGATCTTGTGATGAATAAAG 57.238 36.000 0.00 0.00 32.19 1.85
110 111 7.323420 TGTCTCGATCTTGTGATGAATAAAGT 58.677 34.615 0.00 0.00 32.19 2.66
111 112 7.819415 TGTCTCGATCTTGTGATGAATAAAGTT 59.181 33.333 0.00 0.00 32.19 2.66
112 113 8.324567 GTCTCGATCTTGTGATGAATAAAGTTC 58.675 37.037 0.00 0.00 32.19 3.01
113 114 8.253810 TCTCGATCTTGTGATGAATAAAGTTCT 58.746 33.333 0.00 0.00 32.19 3.01
114 115 9.521503 CTCGATCTTGTGATGAATAAAGTTCTA 57.478 33.333 0.00 0.00 32.19 2.10
177 178 4.829064 TTGTAGACATGTGGTTTTCTGC 57.171 40.909 1.15 0.00 0.00 4.26
184 185 2.842208 TGTGGTTTTCTGCAAAGTCG 57.158 45.000 0.00 0.00 0.00 4.18
192 193 5.106317 GGTTTTCTGCAAAGTCGATTCCATA 60.106 40.000 0.00 0.00 0.00 2.74
193 194 5.545658 TTTCTGCAAAGTCGATTCCATAC 57.454 39.130 0.00 0.00 0.00 2.39
218 219 8.527810 ACGATGGTTTTATGTCAAATAATTGGT 58.472 29.630 0.00 0.00 37.15 3.67
219 220 9.019764 CGATGGTTTTATGTCAAATAATTGGTC 57.980 33.333 0.00 0.00 37.15 4.02
230 231 7.714377 TGTCAAATAATTGGTCTTGTGCAATTT 59.286 29.630 0.00 0.00 37.15 1.82
231 232 8.011106 GTCAAATAATTGGTCTTGTGCAATTTG 58.989 33.333 0.00 0.00 37.15 2.32
234 235 2.798976 TGGTCTTGTGCAATTTGAGC 57.201 45.000 0.00 0.00 0.00 4.26
237 238 2.028748 GGTCTTGTGCAATTTGAGCCAT 60.029 45.455 0.00 0.00 0.00 4.40
258 259 6.740401 GCCATTGGTTATGAATGCTCATGAAT 60.740 38.462 4.26 0.00 42.48 2.57
278 279 9.241317 CATGAATGTGCCTCAATTTTCTAATAC 57.759 33.333 0.00 0.00 0.00 1.89
283 284 8.121305 TGTGCCTCAATTTTCTAATACACAAT 57.879 30.769 0.00 0.00 31.92 2.71
284 285 8.028354 TGTGCCTCAATTTTCTAATACACAATG 58.972 33.333 0.00 0.00 31.92 2.82
285 286 8.028938 GTGCCTCAATTTTCTAATACACAATGT 58.971 33.333 0.00 0.00 0.00 2.71
286 287 8.584157 TGCCTCAATTTTCTAATACACAATGTT 58.416 29.630 0.00 0.00 0.00 2.71
313 314 5.485662 AAGAAGACTGGAAAACTGAAACG 57.514 39.130 0.00 0.00 0.00 3.60
314 315 4.514401 AGAAGACTGGAAAACTGAAACGT 58.486 39.130 0.00 0.00 0.00 3.99
351 352 9.790344 ACAATATAGTGAGTACTAACCGATAGT 57.210 33.333 7.27 2.42 46.62 2.12
395 404 4.740695 GTCTTAAACTATGCAGGCTAGTCG 59.259 45.833 0.00 0.00 0.00 4.18
402 411 1.520342 GCAGGCTAGTCGCTCCAAG 60.520 63.158 4.29 0.00 39.13 3.61
413 422 2.535984 GTCGCTCCAAGATACATCAACG 59.464 50.000 0.00 0.00 0.00 4.10
415 424 3.119280 TCGCTCCAAGATACATCAACGAA 60.119 43.478 0.00 0.00 0.00 3.85
423 432 6.037172 CCAAGATACATCAACGAACCTTTAGG 59.963 42.308 0.00 0.00 42.17 2.69
446 455 6.750039 AGGTACACAAAATCAAAACTTCAACG 59.250 34.615 0.00 0.00 0.00 4.10
469 479 1.160989 ATTACGTGCGCCACATTCAA 58.839 45.000 4.18 0.00 33.40 2.69
480 490 3.490761 CGCCACATTCAACTTCCAAGTTT 60.491 43.478 1.76 0.00 46.52 2.66
483 493 5.284079 CCACATTCAACTTCCAAGTTTCAG 58.716 41.667 1.76 0.00 46.52 3.02
484 494 5.163519 CCACATTCAACTTCCAAGTTTCAGT 60.164 40.000 1.76 0.00 46.52 3.41
487 497 7.645340 CACATTCAACTTCCAAGTTTCAGTAAG 59.355 37.037 1.76 0.00 46.52 2.34
490 500 7.553881 TCAACTTCCAAGTTTCAGTAAGAAG 57.446 36.000 1.76 0.00 46.52 2.85
497 507 6.037830 TCCAAGTTTCAGTAAGAAGTTTTCGG 59.962 38.462 0.00 0.00 37.57 4.30
500 510 4.693042 TTCAGTAAGAAGTTTTCGGGGA 57.307 40.909 0.00 0.00 34.02 4.81
501 511 4.903045 TCAGTAAGAAGTTTTCGGGGAT 57.097 40.909 0.00 0.00 34.02 3.85
504 514 5.001232 CAGTAAGAAGTTTTCGGGGATTCA 58.999 41.667 0.00 0.00 34.02 2.57
517 527 3.124636 CGGGGATTCAACTTTCAACTACG 59.875 47.826 0.00 0.00 0.00 3.51
522 532 7.282450 GGGGATTCAACTTTCAACTACGAATAT 59.718 37.037 0.00 0.00 0.00 1.28
523 533 8.674607 GGGATTCAACTTTCAACTACGAATATT 58.325 33.333 0.00 0.00 0.00 1.28
524 534 9.490663 GGATTCAACTTTCAACTACGAATATTG 57.509 33.333 0.00 0.00 0.00 1.90
527 537 7.726079 TCAACTTTCAACTACGAATATTGTCG 58.274 34.615 0.00 0.00 46.54 4.35
538 548 5.024768 CGAATATTGTCGTGGTTTTGTCA 57.975 39.130 0.00 0.00 36.26 3.58
539 549 4.843984 CGAATATTGTCGTGGTTTTGTCAC 59.156 41.667 0.00 0.00 36.26 3.67
549 559 5.204673 GTGGTTTTGTCACGACAGATATC 57.795 43.478 0.00 0.00 42.94 1.63
550 560 4.092968 GTGGTTTTGTCACGACAGATATCC 59.907 45.833 0.00 1.33 42.94 2.59
551 561 4.020573 TGGTTTTGTCACGACAGATATCCT 60.021 41.667 0.00 0.00 42.94 3.24
552 562 4.567159 GGTTTTGTCACGACAGATATCCTC 59.433 45.833 0.00 0.00 42.94 3.71
553 563 3.692791 TTGTCACGACAGATATCCTCG 57.307 47.619 15.53 15.53 42.94 4.63
554 564 2.640184 TGTCACGACAGATATCCTCGT 58.360 47.619 16.58 16.58 41.23 4.18
555 565 3.800531 TGTCACGACAGATATCCTCGTA 58.199 45.455 20.11 7.66 38.57 3.43
556 566 4.193865 TGTCACGACAGATATCCTCGTAA 58.806 43.478 20.11 8.49 38.57 3.18
557 567 4.637091 TGTCACGACAGATATCCTCGTAAA 59.363 41.667 20.11 12.03 38.57 2.01
558 568 5.124297 TGTCACGACAGATATCCTCGTAAAA 59.876 40.000 20.11 4.61 38.57 1.52
559 569 5.681982 GTCACGACAGATATCCTCGTAAAAG 59.318 44.000 20.11 11.59 38.57 2.27
560 570 4.976731 CACGACAGATATCCTCGTAAAAGG 59.023 45.833 20.11 8.67 38.57 3.11
561 571 4.037684 ACGACAGATATCCTCGTAAAAGGG 59.962 45.833 19.47 0.00 38.83 3.95
562 572 4.308265 GACAGATATCCTCGTAAAAGGGC 58.692 47.826 0.00 0.00 37.02 5.19
563 573 3.967987 ACAGATATCCTCGTAAAAGGGCT 59.032 43.478 0.00 0.00 37.02 5.19
564 574 5.145564 ACAGATATCCTCGTAAAAGGGCTA 58.854 41.667 0.00 0.00 37.02 3.93
565 575 5.601313 ACAGATATCCTCGTAAAAGGGCTAA 59.399 40.000 0.00 0.00 37.02 3.09
566 576 6.159988 CAGATATCCTCGTAAAAGGGCTAAG 58.840 44.000 0.00 0.00 37.02 2.18
567 577 5.839606 AGATATCCTCGTAAAAGGGCTAAGT 59.160 40.000 0.00 0.00 37.02 2.24
568 578 4.838904 ATCCTCGTAAAAGGGCTAAGTT 57.161 40.909 0.00 0.00 37.02 2.66
569 579 3.934068 TCCTCGTAAAAGGGCTAAGTTG 58.066 45.455 0.00 0.00 37.02 3.16
570 580 2.418976 CCTCGTAAAAGGGCTAAGTTGC 59.581 50.000 0.00 0.00 32.35 4.17
571 581 2.070783 TCGTAAAAGGGCTAAGTTGCG 58.929 47.619 0.00 0.00 0.00 4.85
572 582 2.070783 CGTAAAAGGGCTAAGTTGCGA 58.929 47.619 0.00 0.00 31.84 5.10
573 583 2.093783 CGTAAAAGGGCTAAGTTGCGAG 59.906 50.000 0.00 0.00 31.84 5.03
574 584 1.534729 AAAAGGGCTAAGTTGCGAGG 58.465 50.000 0.00 0.00 0.00 4.63
575 585 0.960861 AAAGGGCTAAGTTGCGAGGC 60.961 55.000 0.00 0.00 37.52 4.70
577 587 2.046314 GGCTAAGTTGCGAGGCCA 60.046 61.111 5.01 0.00 42.08 5.36
578 588 1.452108 GGCTAAGTTGCGAGGCCAT 60.452 57.895 5.01 0.00 42.08 4.40
579 589 1.440145 GGCTAAGTTGCGAGGCCATC 61.440 60.000 5.01 0.00 42.08 3.51
588 598 3.289128 CGAGGCCATCGCAAATAGA 57.711 52.632 5.01 0.00 45.98 1.98
589 599 1.800805 CGAGGCCATCGCAAATAGAT 58.199 50.000 5.01 0.00 45.98 1.98
590 600 1.462283 CGAGGCCATCGCAAATAGATG 59.538 52.381 5.01 0.00 45.98 2.90
599 609 6.603237 CATCGCAAATAGATGGTACTTTGA 57.397 37.500 7.08 0.00 41.16 2.69
600 610 7.015226 CATCGCAAATAGATGGTACTTTGAA 57.985 36.000 7.08 0.00 41.16 2.69
601 611 7.642669 CATCGCAAATAGATGGTACTTTGAAT 58.357 34.615 7.08 0.00 41.16 2.57
602 612 7.015226 TCGCAAATAGATGGTACTTTGAATG 57.985 36.000 7.08 0.00 31.76 2.67
603 613 6.038161 TCGCAAATAGATGGTACTTTGAATGG 59.962 38.462 7.08 0.00 31.76 3.16
604 614 6.507023 GCAAATAGATGGTACTTTGAATGGG 58.493 40.000 7.08 0.00 31.76 4.00
605 615 6.461509 GCAAATAGATGGTACTTTGAATGGGG 60.462 42.308 7.08 0.00 31.76 4.96
606 616 5.994416 ATAGATGGTACTTTGAATGGGGT 57.006 39.130 0.00 0.00 0.00 4.95
607 617 4.675063 AGATGGTACTTTGAATGGGGTT 57.325 40.909 0.00 0.00 0.00 4.11
608 618 4.344104 AGATGGTACTTTGAATGGGGTTG 58.656 43.478 0.00 0.00 0.00 3.77
609 619 3.885976 TGGTACTTTGAATGGGGTTGA 57.114 42.857 0.00 0.00 0.00 3.18
610 620 4.396357 TGGTACTTTGAATGGGGTTGAT 57.604 40.909 0.00 0.00 0.00 2.57
611 621 4.340617 TGGTACTTTGAATGGGGTTGATC 58.659 43.478 0.00 0.00 0.00 2.92
612 622 4.202620 TGGTACTTTGAATGGGGTTGATCA 60.203 41.667 0.00 0.00 0.00 2.92
613 623 4.399303 GGTACTTTGAATGGGGTTGATCAG 59.601 45.833 0.00 0.00 0.00 2.90
614 624 4.387026 ACTTTGAATGGGGTTGATCAGA 57.613 40.909 0.00 0.00 0.00 3.27
615 625 4.739793 ACTTTGAATGGGGTTGATCAGAA 58.260 39.130 0.00 0.00 0.00 3.02
616 626 5.147032 ACTTTGAATGGGGTTGATCAGAAA 58.853 37.500 0.00 0.00 0.00 2.52
617 627 5.011023 ACTTTGAATGGGGTTGATCAGAAAC 59.989 40.000 0.00 0.00 0.00 2.78
618 628 3.081061 TGAATGGGGTTGATCAGAAACG 58.919 45.455 0.00 0.00 0.00 3.60
619 629 3.244735 TGAATGGGGTTGATCAGAAACGA 60.245 43.478 0.00 0.00 0.00 3.85
620 630 2.940994 TGGGGTTGATCAGAAACGAA 57.059 45.000 0.00 0.00 0.00 3.85
621 631 2.778299 TGGGGTTGATCAGAAACGAAG 58.222 47.619 0.00 0.00 0.00 3.79
622 632 2.370519 TGGGGTTGATCAGAAACGAAGA 59.629 45.455 0.00 0.00 0.00 2.87
623 633 3.181449 TGGGGTTGATCAGAAACGAAGAA 60.181 43.478 0.00 0.00 0.00 2.52
624 634 3.188667 GGGGTTGATCAGAAACGAAGAAC 59.811 47.826 0.00 0.00 0.00 3.01
625 635 3.813166 GGGTTGATCAGAAACGAAGAACA 59.187 43.478 0.00 0.00 0.00 3.18
626 636 4.319549 GGGTTGATCAGAAACGAAGAACAC 60.320 45.833 0.00 0.00 0.00 3.32
627 637 4.272504 GGTTGATCAGAAACGAAGAACACA 59.727 41.667 0.00 0.00 0.00 3.72
628 638 5.220777 GGTTGATCAGAAACGAAGAACACAA 60.221 40.000 0.00 0.00 0.00 3.33
629 639 5.657470 TGATCAGAAACGAAGAACACAAG 57.343 39.130 0.00 0.00 0.00 3.16
630 640 5.116180 TGATCAGAAACGAAGAACACAAGT 58.884 37.500 0.00 0.00 0.00 3.16
631 641 5.584649 TGATCAGAAACGAAGAACACAAGTT 59.415 36.000 0.00 0.00 41.64 2.66
632 642 5.873179 TCAGAAACGAAGAACACAAGTTT 57.127 34.783 0.00 0.00 38.30 2.66
633 643 6.971527 TCAGAAACGAAGAACACAAGTTTA 57.028 33.333 0.00 0.00 38.30 2.01
634 644 6.768078 TCAGAAACGAAGAACACAAGTTTAC 58.232 36.000 0.00 0.00 38.30 2.01
635 645 5.963586 CAGAAACGAAGAACACAAGTTTACC 59.036 40.000 0.00 0.00 38.30 2.85
636 646 4.888038 AACGAAGAACACAAGTTTACCC 57.112 40.909 0.00 0.00 38.30 3.69
637 647 3.876341 ACGAAGAACACAAGTTTACCCA 58.124 40.909 0.00 0.00 38.30 4.51
638 648 3.875134 ACGAAGAACACAAGTTTACCCAG 59.125 43.478 0.00 0.00 38.30 4.45
639 649 3.250040 CGAAGAACACAAGTTTACCCAGG 59.750 47.826 0.00 0.00 38.30 4.45
640 650 3.945640 AGAACACAAGTTTACCCAGGT 57.054 42.857 0.00 0.00 38.30 4.00
641 651 4.245251 AGAACACAAGTTTACCCAGGTT 57.755 40.909 0.00 0.00 38.30 3.50
642 652 4.204799 AGAACACAAGTTTACCCAGGTTC 58.795 43.478 0.00 0.00 38.30 3.62
643 653 3.655615 ACACAAGTTTACCCAGGTTCA 57.344 42.857 0.00 0.00 0.00 3.18
644 654 3.970842 ACACAAGTTTACCCAGGTTCAA 58.029 40.909 0.00 0.00 0.00 2.69
645 655 3.697542 ACACAAGTTTACCCAGGTTCAAC 59.302 43.478 0.00 0.00 0.00 3.18
646 656 3.067601 CACAAGTTTACCCAGGTTCAACC 59.932 47.826 0.00 0.00 38.99 3.77
647 657 2.626266 CAAGTTTACCCAGGTTCAACCC 59.374 50.000 1.75 0.00 39.75 4.11
648 658 1.146359 AGTTTACCCAGGTTCAACCCC 59.854 52.381 1.75 0.00 39.75 4.95
649 659 1.146359 GTTTACCCAGGTTCAACCCCT 59.854 52.381 1.75 0.00 39.75 4.79
650 660 1.069775 TTACCCAGGTTCAACCCCTC 58.930 55.000 1.75 0.00 39.75 4.30
651 661 0.104356 TACCCAGGTTCAACCCCTCA 60.104 55.000 1.75 0.00 39.75 3.86
652 662 0.776080 ACCCAGGTTCAACCCCTCAT 60.776 55.000 1.75 0.00 39.75 2.90
653 663 0.323725 CCCAGGTTCAACCCCTCATG 60.324 60.000 1.75 0.00 39.75 3.07
654 664 0.323725 CCAGGTTCAACCCCTCATGG 60.324 60.000 1.75 0.00 39.75 3.66
655 665 0.405585 CAGGTTCAACCCCTCATGGT 59.594 55.000 1.75 0.00 39.75 3.55
656 666 0.405585 AGGTTCAACCCCTCATGGTG 59.594 55.000 1.75 0.00 39.75 4.17
657 667 0.611896 GGTTCAACCCCTCATGGTGG 60.612 60.000 0.00 0.00 39.05 4.61
658 668 0.404040 GTTCAACCCCTCATGGTGGA 59.596 55.000 7.15 0.00 39.05 4.02
659 669 0.698238 TTCAACCCCTCATGGTGGAG 59.302 55.000 7.15 0.00 39.52 3.86
668 678 2.369394 CTCATGGTGGAGGTAAAAGCC 58.631 52.381 0.00 0.00 0.00 4.35
669 679 1.992557 TCATGGTGGAGGTAAAAGCCT 59.007 47.619 0.00 0.00 42.53 4.58
670 680 3.186283 TCATGGTGGAGGTAAAAGCCTA 58.814 45.455 0.00 0.00 39.34 3.93
671 681 3.054655 TCATGGTGGAGGTAAAAGCCTAC 60.055 47.826 0.00 0.00 39.34 3.18
672 682 2.627933 TGGTGGAGGTAAAAGCCTACT 58.372 47.619 0.00 0.00 40.21 2.57
673 683 2.570302 TGGTGGAGGTAAAAGCCTACTC 59.430 50.000 0.00 0.00 40.21 2.59
674 684 2.093075 GGTGGAGGTAAAAGCCTACTCC 60.093 54.545 0.00 0.00 43.47 3.85
675 685 2.838813 GTGGAGGTAAAAGCCTACTCCT 59.161 50.000 10.05 0.00 40.21 3.69
676 686 2.838202 TGGAGGTAAAAGCCTACTCCTG 59.162 50.000 10.05 0.00 40.21 3.86
677 687 2.420269 GGAGGTAAAAGCCTACTCCTGC 60.420 54.545 0.00 0.00 39.34 4.85
678 688 2.502130 GAGGTAAAAGCCTACTCCTGCT 59.498 50.000 0.00 0.00 39.34 4.24
680 690 3.010420 GGTAAAAGCCTACTCCTGCTTG 58.990 50.000 0.00 0.00 46.58 4.01
681 691 3.307480 GGTAAAAGCCTACTCCTGCTTGA 60.307 47.826 0.00 0.00 46.58 3.02
682 692 3.728385 AAAAGCCTACTCCTGCTTGAT 57.272 42.857 0.00 0.00 46.58 2.57
683 693 3.728385 AAAGCCTACTCCTGCTTGATT 57.272 42.857 0.00 0.00 46.58 2.57
684 694 2.706339 AGCCTACTCCTGCTTGATTG 57.294 50.000 0.00 0.00 32.94 2.67
685 695 2.191400 AGCCTACTCCTGCTTGATTGA 58.809 47.619 0.00 0.00 32.94 2.57
686 696 2.776536 AGCCTACTCCTGCTTGATTGAT 59.223 45.455 0.00 0.00 32.94 2.57
687 697 3.969976 AGCCTACTCCTGCTTGATTGATA 59.030 43.478 0.00 0.00 32.94 2.15
688 698 4.596643 AGCCTACTCCTGCTTGATTGATAT 59.403 41.667 0.00 0.00 32.94 1.63
689 699 5.072872 AGCCTACTCCTGCTTGATTGATATT 59.927 40.000 0.00 0.00 32.94 1.28
690 700 5.180868 GCCTACTCCTGCTTGATTGATATTG 59.819 44.000 0.00 0.00 0.00 1.90
691 701 6.528321 CCTACTCCTGCTTGATTGATATTGA 58.472 40.000 0.00 0.00 0.00 2.57
692 702 7.166851 CCTACTCCTGCTTGATTGATATTGAT 58.833 38.462 0.00 0.00 0.00 2.57
693 703 7.664731 CCTACTCCTGCTTGATTGATATTGATT 59.335 37.037 0.00 0.00 0.00 2.57
694 704 7.273320 ACTCCTGCTTGATTGATATTGATTG 57.727 36.000 0.00 0.00 0.00 2.67
695 705 6.832384 ACTCCTGCTTGATTGATATTGATTGT 59.168 34.615 0.00 0.00 0.00 2.71
696 706 7.034685 TCCTGCTTGATTGATATTGATTGTG 57.965 36.000 0.00 0.00 0.00 3.33
697 707 6.040054 TCCTGCTTGATTGATATTGATTGTGG 59.960 38.462 0.00 0.00 0.00 4.17
698 708 6.183360 CCTGCTTGATTGATATTGATTGTGGT 60.183 38.462 0.00 0.00 0.00 4.16
699 709 6.566141 TGCTTGATTGATATTGATTGTGGTG 58.434 36.000 0.00 0.00 0.00 4.17
700 710 6.377712 TGCTTGATTGATATTGATTGTGGTGA 59.622 34.615 0.00 0.00 0.00 4.02
701 711 7.068962 TGCTTGATTGATATTGATTGTGGTGAT 59.931 33.333 0.00 0.00 0.00 3.06
702 712 7.594015 GCTTGATTGATATTGATTGTGGTGATC 59.406 37.037 0.00 0.00 0.00 2.92
703 713 8.756486 TTGATTGATATTGATTGTGGTGATCT 57.244 30.769 0.00 0.00 0.00 2.75
704 714 8.756486 TGATTGATATTGATTGTGGTGATCTT 57.244 30.769 0.00 0.00 0.00 2.40
705 715 8.626526 TGATTGATATTGATTGTGGTGATCTTG 58.373 33.333 0.00 0.00 0.00 3.02
706 716 8.756486 ATTGATATTGATTGTGGTGATCTTGA 57.244 30.769 0.00 0.00 0.00 3.02
707 717 8.756486 TTGATATTGATTGTGGTGATCTTGAT 57.244 30.769 0.00 0.00 0.00 2.57
708 718 8.756486 TGATATTGATTGTGGTGATCTTGATT 57.244 30.769 0.00 0.00 0.00 2.57
709 719 9.850198 TGATATTGATTGTGGTGATCTTGATTA 57.150 29.630 0.00 0.00 0.00 1.75
712 722 8.812513 ATTGATTGTGGTGATCTTGATTAGAA 57.187 30.769 0.00 0.00 36.22 2.10
713 723 7.854557 TGATTGTGGTGATCTTGATTAGAAG 57.145 36.000 0.00 0.00 36.22 2.85
714 724 6.825213 TGATTGTGGTGATCTTGATTAGAAGG 59.175 38.462 0.00 0.00 36.22 3.46
715 725 6.373005 TTGTGGTGATCTTGATTAGAAGGA 57.627 37.500 0.00 0.00 36.22 3.36
716 726 5.734720 TGTGGTGATCTTGATTAGAAGGAC 58.265 41.667 0.00 0.00 36.22 3.85
717 727 5.485353 TGTGGTGATCTTGATTAGAAGGACT 59.515 40.000 0.00 0.00 36.22 3.85
718 728 6.013379 TGTGGTGATCTTGATTAGAAGGACTT 60.013 38.462 0.00 0.00 36.22 3.01
719 729 7.180229 TGTGGTGATCTTGATTAGAAGGACTTA 59.820 37.037 0.00 0.00 36.22 2.24
720 730 7.492994 GTGGTGATCTTGATTAGAAGGACTTAC 59.507 40.741 0.00 0.00 36.22 2.34
721 731 7.400339 TGGTGATCTTGATTAGAAGGACTTACT 59.600 37.037 0.00 0.00 36.22 2.24
722 732 8.261522 GGTGATCTTGATTAGAAGGACTTACTT 58.738 37.037 0.00 0.00 36.22 2.24
723 733 9.660180 GTGATCTTGATTAGAAGGACTTACTTT 57.340 33.333 0.00 0.00 36.22 2.66
726 736 8.324163 TCTTGATTAGAAGGACTTACTTTTGC 57.676 34.615 0.00 0.00 0.00 3.68
727 737 8.157476 TCTTGATTAGAAGGACTTACTTTTGCT 58.843 33.333 0.00 0.00 0.00 3.91
728 738 7.672983 TGATTAGAAGGACTTACTTTTGCTG 57.327 36.000 0.00 0.00 0.00 4.41
729 739 5.941948 TTAGAAGGACTTACTTTTGCTGC 57.058 39.130 0.00 0.00 0.00 5.25
730 740 2.808543 AGAAGGACTTACTTTTGCTGCG 59.191 45.455 0.00 0.00 0.00 5.18
731 741 2.543777 AGGACTTACTTTTGCTGCGA 57.456 45.000 0.00 0.00 0.00 5.10
732 742 2.417719 AGGACTTACTTTTGCTGCGAG 58.582 47.619 0.00 0.00 0.00 5.03
733 743 1.135944 GGACTTACTTTTGCTGCGAGC 60.136 52.381 0.00 1.70 42.82 5.03
734 744 1.801178 GACTTACTTTTGCTGCGAGCT 59.199 47.619 9.12 0.00 42.97 4.09
735 745 2.222027 ACTTACTTTTGCTGCGAGCTT 58.778 42.857 9.12 0.00 42.97 3.74
736 746 2.618709 ACTTACTTTTGCTGCGAGCTTT 59.381 40.909 9.12 0.00 42.97 3.51
737 747 2.969443 TACTTTTGCTGCGAGCTTTC 57.031 45.000 9.12 0.00 42.97 2.62
738 748 0.040958 ACTTTTGCTGCGAGCTTTCG 60.041 50.000 9.12 0.00 42.97 3.46
739 749 0.235665 CTTTTGCTGCGAGCTTTCGA 59.764 50.000 0.00 0.00 42.97 3.71
740 750 0.235665 TTTTGCTGCGAGCTTTCGAG 59.764 50.000 0.00 0.00 42.97 4.04
741 751 0.599991 TTTGCTGCGAGCTTTCGAGA 60.600 50.000 0.00 0.00 42.97 4.04
742 752 1.010935 TTGCTGCGAGCTTTCGAGAG 61.011 55.000 0.00 0.00 42.97 3.20
743 753 1.445238 GCTGCGAGCTTTCGAGAGT 60.445 57.895 4.73 0.00 38.45 3.24
744 754 1.011451 GCTGCGAGCTTTCGAGAGTT 61.011 55.000 4.73 0.00 38.45 3.01
745 755 1.423395 CTGCGAGCTTTCGAGAGTTT 58.577 50.000 4.73 0.00 34.64 2.66
746 756 1.388431 CTGCGAGCTTTCGAGAGTTTC 59.612 52.381 4.73 2.71 34.64 2.78
747 757 1.000163 TGCGAGCTTTCGAGAGTTTCT 60.000 47.619 4.73 0.00 34.64 2.52
748 758 2.228103 TGCGAGCTTTCGAGAGTTTCTA 59.772 45.455 4.73 0.00 34.64 2.10
749 759 3.243336 GCGAGCTTTCGAGAGTTTCTAA 58.757 45.455 4.73 0.00 34.64 2.10
750 760 3.059702 GCGAGCTTTCGAGAGTTTCTAAC 59.940 47.826 4.73 0.00 34.64 2.34
751 761 4.477780 CGAGCTTTCGAGAGTTTCTAACT 58.522 43.478 4.73 0.00 38.93 2.24
752 762 4.918583 CGAGCTTTCGAGAGTTTCTAACTT 59.081 41.667 4.73 0.00 37.27 2.66
753 763 5.164138 CGAGCTTTCGAGAGTTTCTAACTTG 60.164 44.000 4.73 0.00 37.27 3.16
754 764 5.602628 AGCTTTCGAGAGTTTCTAACTTGT 58.397 37.500 4.73 0.00 43.03 3.16
755 765 6.049790 AGCTTTCGAGAGTTTCTAACTTGTT 58.950 36.000 4.73 0.00 43.03 2.83
756 766 7.208080 AGCTTTCGAGAGTTTCTAACTTGTTA 58.792 34.615 4.73 0.00 43.03 2.41
757 767 7.873505 AGCTTTCGAGAGTTTCTAACTTGTTAT 59.126 33.333 4.73 0.00 43.03 1.89
758 768 8.496751 GCTTTCGAGAGTTTCTAACTTGTTATT 58.503 33.333 4.73 0.00 43.03 1.40
763 773 9.302773 CGAGAGTTTCTAACTTGTTATTTTTCG 57.697 33.333 0.00 0.00 43.03 3.46
766 776 9.378597 GAGTTTCTAACTTGTTATTTTTCGTCC 57.621 33.333 0.00 0.00 43.03 4.79
767 777 8.347771 AGTTTCTAACTTGTTATTTTTCGTCCC 58.652 33.333 0.00 0.00 39.04 4.46
768 778 7.804843 TTCTAACTTGTTATTTTTCGTCCCA 57.195 32.000 0.00 0.00 0.00 4.37
769 779 7.429636 TCTAACTTGTTATTTTTCGTCCCAG 57.570 36.000 0.00 0.00 0.00 4.45
770 780 5.447624 AACTTGTTATTTTTCGTCCCAGG 57.552 39.130 0.00 0.00 0.00 4.45
771 781 4.721132 ACTTGTTATTTTTCGTCCCAGGA 58.279 39.130 0.00 0.00 0.00 3.86
772 782 5.134661 ACTTGTTATTTTTCGTCCCAGGAA 58.865 37.500 0.00 0.00 0.00 3.36
773 783 5.009310 ACTTGTTATTTTTCGTCCCAGGAAC 59.991 40.000 0.00 0.00 0.00 3.62
774 784 4.721132 TGTTATTTTTCGTCCCAGGAACT 58.279 39.130 0.00 0.00 43.88 3.01
775 785 4.758165 TGTTATTTTTCGTCCCAGGAACTC 59.242 41.667 0.00 0.00 34.60 3.01
776 786 3.790089 ATTTTTCGTCCCAGGAACTCT 57.210 42.857 0.00 0.00 34.60 3.24
777 787 2.833631 TTTTCGTCCCAGGAACTCTC 57.166 50.000 0.00 0.00 34.60 3.20
778 788 0.974383 TTTCGTCCCAGGAACTCTCC 59.026 55.000 0.00 0.00 42.81 3.71
788 798 2.106477 GGAACTCTCCTTCTGGCTTG 57.894 55.000 0.00 0.00 38.88 4.01
789 799 1.339535 GGAACTCTCCTTCTGGCTTGG 60.340 57.143 0.00 0.00 38.88 3.61
790 800 1.349357 GAACTCTCCTTCTGGCTTGGT 59.651 52.381 0.00 0.00 0.00 3.67
791 801 1.439543 ACTCTCCTTCTGGCTTGGTT 58.560 50.000 0.00 0.00 0.00 3.67
792 802 1.777272 ACTCTCCTTCTGGCTTGGTTT 59.223 47.619 0.00 0.00 0.00 3.27
793 803 2.224646 ACTCTCCTTCTGGCTTGGTTTC 60.225 50.000 0.00 0.00 0.00 2.78
794 804 1.073923 TCTCCTTCTGGCTTGGTTTCC 59.926 52.381 0.00 0.00 0.00 3.13
795 805 1.074566 CTCCTTCTGGCTTGGTTTCCT 59.925 52.381 0.00 0.00 0.00 3.36
796 806 1.499007 TCCTTCTGGCTTGGTTTCCTT 59.501 47.619 0.00 0.00 0.00 3.36
797 807 2.091333 TCCTTCTGGCTTGGTTTCCTTT 60.091 45.455 0.00 0.00 0.00 3.11
798 808 2.036346 CCTTCTGGCTTGGTTTCCTTTG 59.964 50.000 0.00 0.00 0.00 2.77
799 809 2.746279 TCTGGCTTGGTTTCCTTTGA 57.254 45.000 0.00 0.00 0.00 2.69
800 810 2.586425 TCTGGCTTGGTTTCCTTTGAG 58.414 47.619 0.00 0.00 0.00 3.02
801 811 1.615392 CTGGCTTGGTTTCCTTTGAGG 59.385 52.381 0.00 0.00 36.46 3.86
802 812 0.318441 GGCTTGGTTTCCTTTGAGGC 59.682 55.000 0.00 0.00 34.61 4.70
803 813 0.318441 GCTTGGTTTCCTTTGAGGCC 59.682 55.000 0.00 0.00 34.61 5.19
804 814 0.969149 CTTGGTTTCCTTTGAGGCCC 59.031 55.000 0.00 0.00 34.61 5.80
805 815 0.825840 TTGGTTTCCTTTGAGGCCCG 60.826 55.000 0.00 0.00 34.61 6.13
806 816 1.074248 GGTTTCCTTTGAGGCCCGA 59.926 57.895 0.00 0.00 34.61 5.14
807 817 0.538746 GGTTTCCTTTGAGGCCCGAA 60.539 55.000 0.00 0.00 34.61 4.30
808 818 1.324383 GTTTCCTTTGAGGCCCGAAA 58.676 50.000 0.00 0.00 34.61 3.46
809 819 1.269723 GTTTCCTTTGAGGCCCGAAAG 59.730 52.381 14.61 14.61 34.61 2.62
810 820 0.476771 TTCCTTTGAGGCCCGAAAGT 59.523 50.000 18.36 0.00 34.61 2.66
811 821 1.354101 TCCTTTGAGGCCCGAAAGTA 58.646 50.000 18.36 4.73 34.61 2.24
812 822 1.278127 TCCTTTGAGGCCCGAAAGTAG 59.722 52.381 18.36 8.08 34.61 2.57
813 823 1.003233 CCTTTGAGGCCCGAAAGTAGT 59.997 52.381 18.36 0.00 0.00 2.73
814 824 2.076863 CTTTGAGGCCCGAAAGTAGTG 58.923 52.381 13.68 0.00 0.00 2.74
815 825 0.321298 TTGAGGCCCGAAAGTAGTGC 60.321 55.000 0.00 0.00 0.00 4.40
816 826 1.810030 GAGGCCCGAAAGTAGTGCG 60.810 63.158 0.00 0.00 0.00 5.34
817 827 2.221906 GAGGCCCGAAAGTAGTGCGA 62.222 60.000 0.00 0.00 0.00 5.10
818 828 2.098831 GGCCCGAAAGTAGTGCGAC 61.099 63.158 0.00 0.00 0.00 5.19
819 829 1.080025 GCCCGAAAGTAGTGCGACT 60.080 57.895 0.00 0.00 0.00 4.18
820 830 1.077089 GCCCGAAAGTAGTGCGACTC 61.077 60.000 0.00 0.00 0.00 3.36
821 831 0.242825 CCCGAAAGTAGTGCGACTCA 59.757 55.000 0.00 0.00 0.00 3.41
822 832 1.337821 CCGAAAGTAGTGCGACTCAC 58.662 55.000 0.00 0.00 45.98 3.51
829 839 4.586618 GTGCGACTCACAGAGCAT 57.413 55.556 0.00 0.00 44.98 3.79
830 840 2.076582 GTGCGACTCACAGAGCATG 58.923 57.895 0.00 0.00 44.98 4.06
831 841 0.668706 GTGCGACTCACAGAGCATGT 60.669 55.000 0.00 0.00 44.98 3.21
832 842 0.033920 TGCGACTCACAGAGCATGTT 59.966 50.000 0.00 0.00 41.41 2.71
833 843 1.151668 GCGACTCACAGAGCATGTTT 58.848 50.000 0.00 0.00 41.41 2.83
834 844 2.288763 TGCGACTCACAGAGCATGTTTA 60.289 45.455 0.00 0.00 41.41 2.01
835 845 2.346847 GCGACTCACAGAGCATGTTTAG 59.653 50.000 0.00 0.00 41.41 1.85
836 846 2.926200 CGACTCACAGAGCATGTTTAGG 59.074 50.000 0.00 0.00 41.41 2.69
837 847 3.367395 CGACTCACAGAGCATGTTTAGGA 60.367 47.826 0.00 0.00 41.41 2.94
838 848 4.679106 CGACTCACAGAGCATGTTTAGGAT 60.679 45.833 0.00 0.00 41.41 3.24
839 849 5.171339 ACTCACAGAGCATGTTTAGGATT 57.829 39.130 0.00 0.00 41.41 3.01
840 850 6.299805 ACTCACAGAGCATGTTTAGGATTA 57.700 37.500 0.00 0.00 41.41 1.75
841 851 6.109359 ACTCACAGAGCATGTTTAGGATTAC 58.891 40.000 0.00 0.00 41.41 1.89
842 852 5.428253 TCACAGAGCATGTTTAGGATTACC 58.572 41.667 0.00 0.00 41.41 2.85
843 853 5.045942 TCACAGAGCATGTTTAGGATTACCA 60.046 40.000 0.00 0.00 41.41 3.25
844 854 5.295292 CACAGAGCATGTTTAGGATTACCAG 59.705 44.000 0.00 0.00 41.41 4.00
845 855 4.818546 CAGAGCATGTTTAGGATTACCAGG 59.181 45.833 0.00 0.00 38.94 4.45
846 856 3.555966 AGCATGTTTAGGATTACCAGGC 58.444 45.455 0.00 0.00 38.94 4.85
847 857 3.203040 AGCATGTTTAGGATTACCAGGCT 59.797 43.478 0.00 0.00 38.23 4.58
848 858 3.565902 GCATGTTTAGGATTACCAGGCTC 59.434 47.826 0.00 0.00 38.94 4.70
849 859 3.536956 TGTTTAGGATTACCAGGCTCG 57.463 47.619 0.00 0.00 38.94 5.03
850 860 2.169769 TGTTTAGGATTACCAGGCTCGG 59.830 50.000 2.01 2.01 38.94 4.63
851 861 1.420430 TTAGGATTACCAGGCTCGGG 58.580 55.000 7.70 0.00 38.94 5.14
852 862 0.471211 TAGGATTACCAGGCTCGGGG 60.471 60.000 7.70 0.00 38.94 5.73
853 863 2.111251 GATTACCAGGCTCGGGGC 59.889 66.667 0.00 0.00 40.90 5.80
866 876 3.468140 GGGGCCGGGTCTCACTAC 61.468 72.222 2.18 0.00 0.00 2.73
867 877 3.834799 GGGCCGGGTCTCACTACG 61.835 72.222 2.18 0.00 0.00 3.51
868 878 3.066814 GGCCGGGTCTCACTACGT 61.067 66.667 2.18 0.00 0.00 3.57
869 879 2.488820 GCCGGGTCTCACTACGTC 59.511 66.667 2.18 0.00 0.00 4.34
870 880 2.789917 CCGGGTCTCACTACGTCG 59.210 66.667 0.00 0.00 0.00 5.12
871 881 2.758089 CCGGGTCTCACTACGTCGG 61.758 68.421 0.00 0.00 33.06 4.79
872 882 2.758089 CGGGTCTCACTACGTCGGG 61.758 68.421 0.00 0.00 0.00 5.14
873 883 1.676967 GGGTCTCACTACGTCGGGT 60.677 63.158 0.00 0.00 0.00 5.28
874 884 1.652167 GGGTCTCACTACGTCGGGTC 61.652 65.000 0.00 0.00 0.00 4.46
875 885 0.676151 GGTCTCACTACGTCGGGTCT 60.676 60.000 0.00 0.00 0.00 3.85
876 886 0.726256 GTCTCACTACGTCGGGTCTC 59.274 60.000 0.00 0.00 0.00 3.36
877 887 0.738762 TCTCACTACGTCGGGTCTCG 60.739 60.000 0.00 0.00 40.90 4.04
878 888 2.099831 CACTACGTCGGGTCTCGC 59.900 66.667 0.00 0.00 39.05 5.03
879 889 3.130160 ACTACGTCGGGTCTCGCC 61.130 66.667 0.00 0.00 39.05 5.54
907 917 4.383173 GGAATATCCCGAACAAATACCGT 58.617 43.478 0.00 0.00 0.00 4.83
908 918 4.212636 GGAATATCCCGAACAAATACCGTG 59.787 45.833 0.00 0.00 0.00 4.94
909 919 2.773993 ATCCCGAACAAATACCGTGT 57.226 45.000 0.00 0.00 0.00 4.49
910 920 2.547299 TCCCGAACAAATACCGTGTT 57.453 45.000 0.00 0.00 41.84 3.32
1007 1017 1.079197 GCCAAAAGCCCATTTCCGG 60.079 57.895 0.00 0.00 34.35 5.14
1091 1102 7.010160 AGAAAATTATTTTGTGGACCTCTCCA 58.990 34.615 7.72 0.00 37.31 3.86
1127 1140 2.363018 TCTGCCGGAGTCCAGAGG 60.363 66.667 5.05 3.41 33.44 3.69
1378 1403 3.756783 CCCTCCCCGTCCTCCTCT 61.757 72.222 0.00 0.00 0.00 3.69
1813 1841 2.612972 CGTGCTCATTTCCTGGTACTGT 60.613 50.000 0.00 0.00 0.00 3.55
1992 2020 1.497278 CGCACGAGGTGTTTGATGG 59.503 57.895 0.00 0.00 35.75 3.51
2072 2100 3.688694 ACAGTGCGGTGAATAAGGTTA 57.311 42.857 0.00 0.00 0.00 2.85
2098 2126 2.641815 GGCTATTGAGTGGATGAGGGAT 59.358 50.000 0.00 0.00 0.00 3.85
2211 2239 1.539065 GCGGTTCATGATCGAGATGGT 60.539 52.381 18.98 0.00 0.00 3.55
2271 2299 1.271543 TGTGAAGGATGCAACTGAGGG 60.272 52.381 0.00 0.00 0.00 4.30
2344 2372 3.243839 GCATCAAGGAAAGGTTTCAGCAA 60.244 43.478 4.89 0.00 38.92 3.91
2380 2408 0.930310 CCATAATGCGACCAGTGACG 59.070 55.000 0.00 0.00 0.00 4.35
2400 2428 6.364706 GTGACGAGATAATCAGGATCAACATC 59.635 42.308 0.00 0.00 0.00 3.06
2576 2604 5.459536 TTTGAGAGTAGATGATGATCCCG 57.540 43.478 0.00 0.00 0.00 5.14
2604 2632 9.401058 GGGAAAATCTCTAGATGAAAATGAGAA 57.599 33.333 0.00 0.00 37.34 2.87
2848 2877 9.734620 CATGACCATCATAAATTTGTATTTCGT 57.265 29.630 0.00 0.00 34.28 3.85
2912 2941 1.066858 ACTCAGGCCTACACATGTTCG 60.067 52.381 3.98 0.00 0.00 3.95
2923 2952 3.399330 ACACATGTTCGGTTTACCAGAG 58.601 45.455 0.00 0.00 35.14 3.35
2930 2960 1.689813 TCGGTTTACCAGAGTTGCAGA 59.310 47.619 0.00 0.00 35.14 4.26
2933 2963 3.502211 CGGTTTACCAGAGTTGCAGAAAT 59.498 43.478 0.00 0.00 35.14 2.17
2936 2966 6.280643 GGTTTACCAGAGTTGCAGAAATTTT 58.719 36.000 0.00 0.00 35.64 1.82
3004 3034 3.488778 ACTTTTTGGCAATGGCATCAA 57.511 38.095 11.08 4.04 43.71 2.57
3007 3037 3.420300 TTTTGGCAATGGCATCAATGT 57.580 38.095 11.08 0.00 43.71 2.71
3008 3038 3.420300 TTTGGCAATGGCATCAATGTT 57.580 38.095 11.08 0.00 43.71 2.71
3012 3042 5.866159 TGGCAATGGCATCAATGTTATTA 57.134 34.783 5.05 0.00 43.71 0.98
3015 3045 5.693104 GGCAATGGCATCAATGTTATTACAG 59.307 40.000 0.00 0.00 43.71 2.74
3016 3046 6.461370 GGCAATGGCATCAATGTTATTACAGA 60.461 38.462 0.00 0.00 43.71 3.41
3031 3061 9.961265 TGTTATTACAGATATGTTAGAAGTCGG 57.039 33.333 0.00 0.00 0.00 4.79
3098 3131 5.402568 CGCATGAAGTGTATAGTGTATGTCC 59.597 44.000 0.00 0.00 0.00 4.02
3214 3247 7.165812 CCATTTCTACAAAAAGAACTTCACACG 59.834 37.037 0.00 0.00 35.25 4.49
3221 3254 5.622770 AAAAGAACTTCACACGTGAACTT 57.377 34.783 25.01 12.40 43.90 2.66
3227 3260 3.945285 ACTTCACACGTGAACTTGGAATT 59.055 39.130 25.01 7.11 43.90 2.17
3230 3263 3.942115 TCACACGTGAACTTGGAATTTGA 59.058 39.130 25.01 7.79 36.53 2.69
3232 3265 4.734854 CACACGTGAACTTGGAATTTGAAG 59.265 41.667 25.01 0.00 0.00 3.02
3246 3279 5.069119 GGAATTTGAAGAACAACAAGGACCT 59.931 40.000 0.00 0.00 38.29 3.85
3267 3300 8.978539 GGACCTCAAAAATTAGTTTCACAAATC 58.021 33.333 0.00 0.00 0.00 2.17
3472 3505 2.173519 CATGGTTTCCAAGCTGATGGT 58.826 47.619 4.36 0.00 41.46 3.55
3637 3670 7.589954 GTGTAATTGTAATTTGTGCGGATATCC 59.410 37.037 12.14 12.14 0.00 2.59
3721 3754 6.169094 TGCTTTCTTAGACTCTCTCCATTTG 58.831 40.000 0.00 0.00 0.00 2.32
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
3 4 3.847671 AGAGCTAAATGGGGACTTAGC 57.152 47.619 5.83 5.83 46.83 3.09
4 5 5.359194 TCAAGAGCTAAATGGGGACTTAG 57.641 43.478 0.00 0.00 0.00 2.18
5 6 5.975988 ATCAAGAGCTAAATGGGGACTTA 57.024 39.130 0.00 0.00 0.00 2.24
6 7 4.870021 ATCAAGAGCTAAATGGGGACTT 57.130 40.909 0.00 0.00 0.00 3.01
7 8 6.521527 AATATCAAGAGCTAAATGGGGACT 57.478 37.500 0.00 0.00 0.00 3.85
8 9 7.001073 AGAAATATCAAGAGCTAAATGGGGAC 58.999 38.462 0.00 0.00 0.00 4.46
9 10 7.154191 AGAAATATCAAGAGCTAAATGGGGA 57.846 36.000 0.00 0.00 0.00 4.81
10 11 6.432472 GGAGAAATATCAAGAGCTAAATGGGG 59.568 42.308 0.00 0.00 0.00 4.96
11 12 7.230027 AGGAGAAATATCAAGAGCTAAATGGG 58.770 38.462 0.00 0.00 0.00 4.00
12 13 8.688747 AAGGAGAAATATCAAGAGCTAAATGG 57.311 34.615 0.00 0.00 0.00 3.16
15 16 8.960591 CCAAAAGGAGAAATATCAAGAGCTAAA 58.039 33.333 0.00 0.00 0.00 1.85
16 17 7.557719 CCCAAAAGGAGAAATATCAAGAGCTAA 59.442 37.037 0.00 0.00 38.24 3.09
17 18 7.056635 CCCAAAAGGAGAAATATCAAGAGCTA 58.943 38.462 0.00 0.00 38.24 3.32
18 19 5.890419 CCCAAAAGGAGAAATATCAAGAGCT 59.110 40.000 0.00 0.00 38.24 4.09
19 20 5.888161 TCCCAAAAGGAGAAATATCAAGAGC 59.112 40.000 0.00 0.00 40.93 4.09
33 34 2.307686 GGATGGTAGTGTCCCAAAAGGA 59.692 50.000 0.00 0.00 44.91 3.36
34 35 2.041081 TGGATGGTAGTGTCCCAAAAGG 59.959 50.000 0.00 0.00 35.14 3.11
35 36 3.433306 TGGATGGTAGTGTCCCAAAAG 57.567 47.619 0.00 0.00 35.14 2.27
36 37 4.538490 AGTATGGATGGTAGTGTCCCAAAA 59.462 41.667 0.00 0.00 35.14 2.44
37 38 4.108570 AGTATGGATGGTAGTGTCCCAAA 58.891 43.478 0.00 0.00 35.14 3.28
38 39 3.731431 AGTATGGATGGTAGTGTCCCAA 58.269 45.455 0.00 0.00 35.14 4.12
39 40 3.414759 AGTATGGATGGTAGTGTCCCA 57.585 47.619 0.00 0.00 36.16 4.37
40 41 4.772886 AAAGTATGGATGGTAGTGTCCC 57.227 45.455 0.00 0.00 33.45 4.46
41 42 7.990886 TGAAATAAAGTATGGATGGTAGTGTCC 59.009 37.037 0.00 0.00 35.02 4.02
42 43 8.827677 GTGAAATAAAGTATGGATGGTAGTGTC 58.172 37.037 0.00 0.00 0.00 3.67
43 44 7.773690 GGTGAAATAAAGTATGGATGGTAGTGT 59.226 37.037 0.00 0.00 0.00 3.55
44 45 7.993183 AGGTGAAATAAAGTATGGATGGTAGTG 59.007 37.037 0.00 0.00 0.00 2.74
45 46 8.102484 AGGTGAAATAAAGTATGGATGGTAGT 57.898 34.615 0.00 0.00 0.00 2.73
46 47 8.980481 AAGGTGAAATAAAGTATGGATGGTAG 57.020 34.615 0.00 0.00 0.00 3.18
47 48 9.184523 CAAAGGTGAAATAAAGTATGGATGGTA 57.815 33.333 0.00 0.00 0.00 3.25
48 49 7.363793 GCAAAGGTGAAATAAAGTATGGATGGT 60.364 37.037 0.00 0.00 0.00 3.55
49 50 6.980397 GCAAAGGTGAAATAAAGTATGGATGG 59.020 38.462 0.00 0.00 0.00 3.51
50 51 7.775120 AGCAAAGGTGAAATAAAGTATGGATG 58.225 34.615 0.00 0.00 0.00 3.51
51 52 7.961326 AGCAAAGGTGAAATAAAGTATGGAT 57.039 32.000 0.00 0.00 0.00 3.41
52 53 7.232534 ACAAGCAAAGGTGAAATAAAGTATGGA 59.767 33.333 0.00 0.00 0.00 3.41
53 54 7.378181 ACAAGCAAAGGTGAAATAAAGTATGG 58.622 34.615 0.00 0.00 0.00 2.74
54 55 8.081633 TGACAAGCAAAGGTGAAATAAAGTATG 58.918 33.333 0.00 0.00 0.00 2.39
55 56 8.177119 TGACAAGCAAAGGTGAAATAAAGTAT 57.823 30.769 0.00 0.00 0.00 2.12
56 57 7.575414 TGACAAGCAAAGGTGAAATAAAGTA 57.425 32.000 0.00 0.00 0.00 2.24
57 58 6.463995 TGACAAGCAAAGGTGAAATAAAGT 57.536 33.333 0.00 0.00 0.00 2.66
58 59 7.652909 TCATTGACAAGCAAAGGTGAAATAAAG 59.347 33.333 0.00 0.00 40.48 1.85
59 60 7.495901 TCATTGACAAGCAAAGGTGAAATAAA 58.504 30.769 0.00 0.00 40.48 1.40
60 61 7.048629 TCATTGACAAGCAAAGGTGAAATAA 57.951 32.000 0.00 0.00 40.48 1.40
61 62 6.647334 TCATTGACAAGCAAAGGTGAAATA 57.353 33.333 0.00 0.00 40.48 1.40
62 63 5.534207 TCATTGACAAGCAAAGGTGAAAT 57.466 34.783 0.00 0.00 40.48 2.17
63 64 4.998671 TCATTGACAAGCAAAGGTGAAA 57.001 36.364 0.00 0.00 40.48 2.69
64 65 4.341806 ACATCATTGACAAGCAAAGGTGAA 59.658 37.500 0.00 0.00 38.29 3.18
65 66 3.890756 ACATCATTGACAAGCAAAGGTGA 59.109 39.130 0.00 0.00 38.29 4.02
66 67 4.022589 AGACATCATTGACAAGCAAAGGTG 60.023 41.667 0.00 0.00 41.00 4.00
67 68 4.147321 AGACATCATTGACAAGCAAAGGT 58.853 39.130 0.00 0.00 40.48 3.50
68 69 4.670992 CGAGACATCATTGACAAGCAAAGG 60.671 45.833 0.00 0.00 40.48 3.11
69 70 4.152938 TCGAGACATCATTGACAAGCAAAG 59.847 41.667 0.00 0.00 40.48 2.77
70 71 4.064388 TCGAGACATCATTGACAAGCAAA 58.936 39.130 0.00 0.00 40.48 3.68
71 72 3.663025 TCGAGACATCATTGACAAGCAA 58.337 40.909 0.00 0.00 41.53 3.91
72 73 3.317603 TCGAGACATCATTGACAAGCA 57.682 42.857 0.00 0.00 0.00 3.91
73 74 4.118410 AGATCGAGACATCATTGACAAGC 58.882 43.478 0.00 0.00 0.00 4.01
74 75 5.579904 ACAAGATCGAGACATCATTGACAAG 59.420 40.000 0.00 0.00 0.00 3.16
75 76 5.349543 CACAAGATCGAGACATCATTGACAA 59.650 40.000 0.00 0.00 0.00 3.18
76 77 4.866486 CACAAGATCGAGACATCATTGACA 59.134 41.667 0.00 0.00 0.00 3.58
77 78 5.105063 TCACAAGATCGAGACATCATTGAC 58.895 41.667 0.00 0.00 0.00 3.18
78 79 5.329035 TCACAAGATCGAGACATCATTGA 57.671 39.130 0.00 0.00 0.00 2.57
79 80 5.751990 TCATCACAAGATCGAGACATCATTG 59.248 40.000 0.00 0.00 30.20 2.82
80 81 5.910614 TCATCACAAGATCGAGACATCATT 58.089 37.500 0.00 0.00 30.20 2.57
81 82 5.526506 TCATCACAAGATCGAGACATCAT 57.473 39.130 0.00 0.00 30.20 2.45
82 83 4.989279 TCATCACAAGATCGAGACATCA 57.011 40.909 0.00 0.00 30.20 3.07
83 84 7.936950 TTATTCATCACAAGATCGAGACATC 57.063 36.000 0.00 0.00 30.20 3.06
84 85 7.984050 ACTTTATTCATCACAAGATCGAGACAT 59.016 33.333 0.00 0.00 30.20 3.06
85 86 7.323420 ACTTTATTCATCACAAGATCGAGACA 58.677 34.615 0.00 0.00 30.20 3.41
86 87 7.763172 ACTTTATTCATCACAAGATCGAGAC 57.237 36.000 0.00 0.00 30.20 3.36
87 88 8.253810 AGAACTTTATTCATCACAAGATCGAGA 58.746 33.333 0.00 0.00 30.20 4.04
88 89 8.417780 AGAACTTTATTCATCACAAGATCGAG 57.582 34.615 0.00 0.00 30.20 4.04
124 125 9.394767 ACCTTTTTATTTGCAAGAATCACTTTT 57.605 25.926 0.00 0.00 36.61 2.27
125 126 8.962884 ACCTTTTTATTTGCAAGAATCACTTT 57.037 26.923 0.00 0.00 36.61 2.66
157 158 3.814625 TGCAGAAAACCACATGTCTACA 58.185 40.909 0.00 0.00 0.00 2.74
168 169 3.004315 TGGAATCGACTTTGCAGAAAACC 59.996 43.478 0.00 0.00 0.00 3.27
169 170 4.223320 TGGAATCGACTTTGCAGAAAAC 57.777 40.909 0.00 0.00 0.00 2.43
176 177 4.120646 CATCGTATGGAATCGACTTTGC 57.879 45.455 0.00 0.00 38.85 3.68
192 193 8.527810 ACCAATTATTTGACATAAAACCATCGT 58.472 29.630 0.00 0.00 34.60 3.73
193 194 8.925161 ACCAATTATTTGACATAAAACCATCG 57.075 30.769 0.00 0.00 34.60 3.84
199 200 9.202273 GCACAAGACCAATTATTTGACATAAAA 57.798 29.630 0.00 0.00 34.60 1.52
213 214 3.555586 GGCTCAAATTGCACAAGACCAAT 60.556 43.478 0.00 0.00 33.35 3.16
215 216 1.340889 GGCTCAAATTGCACAAGACCA 59.659 47.619 0.00 0.00 0.00 4.02
218 219 3.555377 CCAATGGCTCAAATTGCACAAGA 60.555 43.478 0.00 0.00 34.35 3.02
219 220 2.739913 CCAATGGCTCAAATTGCACAAG 59.260 45.455 0.00 0.00 34.35 3.16
221 222 1.693062 ACCAATGGCTCAAATTGCACA 59.307 42.857 0.00 0.00 34.35 4.57
230 231 3.633525 GAGCATTCATAACCAATGGCTCA 59.366 43.478 0.00 0.00 36.03 4.26
231 232 3.633525 TGAGCATTCATAACCAATGGCTC 59.366 43.478 0.00 0.00 36.26 4.70
234 235 5.777850 TCATGAGCATTCATAACCAATGG 57.222 39.130 0.00 0.00 42.12 3.16
237 238 6.566141 CACATTCATGAGCATTCATAACCAA 58.434 36.000 0.00 0.00 42.12 3.67
258 259 7.517614 TTGTGTATTAGAAAATTGAGGCACA 57.482 32.000 0.00 0.00 0.00 4.57
283 284 9.621629 TCAGTTTTCCAGTCTTCTTTTATAACA 57.378 29.630 0.00 0.00 0.00 2.41
287 288 8.129211 CGTTTCAGTTTTCCAGTCTTCTTTTAT 58.871 33.333 0.00 0.00 0.00 1.40
288 289 7.120138 ACGTTTCAGTTTTCCAGTCTTCTTTTA 59.880 33.333 0.00 0.00 0.00 1.52
289 290 6.072119 ACGTTTCAGTTTTCCAGTCTTCTTTT 60.072 34.615 0.00 0.00 0.00 2.27
290 291 5.414765 ACGTTTCAGTTTTCCAGTCTTCTTT 59.585 36.000 0.00 0.00 0.00 2.52
291 292 4.941873 ACGTTTCAGTTTTCCAGTCTTCTT 59.058 37.500 0.00 0.00 0.00 2.52
292 293 4.332819 CACGTTTCAGTTTTCCAGTCTTCT 59.667 41.667 0.00 0.00 0.00 2.85
293 294 4.331717 TCACGTTTCAGTTTTCCAGTCTTC 59.668 41.667 0.00 0.00 0.00 2.87
294 295 4.258543 TCACGTTTCAGTTTTCCAGTCTT 58.741 39.130 0.00 0.00 0.00 3.01
295 296 3.869065 TCACGTTTCAGTTTTCCAGTCT 58.131 40.909 0.00 0.00 0.00 3.24
296 297 4.035208 ACATCACGTTTCAGTTTTCCAGTC 59.965 41.667 0.00 0.00 0.00 3.51
297 298 3.945285 ACATCACGTTTCAGTTTTCCAGT 59.055 39.130 0.00 0.00 0.00 4.00
298 299 4.552166 ACATCACGTTTCAGTTTTCCAG 57.448 40.909 0.00 0.00 0.00 3.86
299 300 6.438259 TTTACATCACGTTTCAGTTTTCCA 57.562 33.333 0.00 0.00 0.00 3.53
300 301 7.924103 AATTTACATCACGTTTCAGTTTTCC 57.076 32.000 0.00 0.00 0.00 3.13
301 302 9.440784 TGTAATTTACATCACGTTTCAGTTTTC 57.559 29.630 5.14 0.00 32.89 2.29
343 344 9.669887 TGTTTTGTATTGGTTAATACTATCGGT 57.330 29.630 10.45 0.00 45.71 4.69
395 404 3.309954 GGTTCGTTGATGTATCTTGGAGC 59.690 47.826 0.00 0.00 0.00 4.70
423 432 7.483691 AGACGTTGAAGTTTTGATTTTGTGTAC 59.516 33.333 0.00 0.00 0.00 2.90
446 455 1.567504 ATGTGGCGCACGTAATAGAC 58.432 50.000 10.83 0.00 37.14 2.59
455 464 0.387239 GGAAGTTGAATGTGGCGCAC 60.387 55.000 10.83 6.37 34.56 5.34
456 465 0.821301 TGGAAGTTGAATGTGGCGCA 60.821 50.000 10.83 1.92 0.00 6.09
469 479 7.939784 AAACTTCTTACTGAAACTTGGAAGT 57.060 32.000 0.00 0.00 42.06 3.01
480 490 4.903045 ATCCCCGAAAACTTCTTACTGA 57.097 40.909 0.00 0.00 0.00 3.41
483 493 5.472478 AGTTGAATCCCCGAAAACTTCTTAC 59.528 40.000 0.00 0.00 0.00 2.34
484 494 5.627135 AGTTGAATCCCCGAAAACTTCTTA 58.373 37.500 0.00 0.00 0.00 2.10
487 497 4.848562 AAGTTGAATCCCCGAAAACTTC 57.151 40.909 0.00 0.00 36.59 3.01
490 500 4.577834 TGAAAGTTGAATCCCCGAAAAC 57.422 40.909 0.00 0.00 0.00 2.43
497 507 5.934935 TTCGTAGTTGAAAGTTGAATCCC 57.065 39.130 0.00 0.00 0.00 3.85
501 511 8.218441 CGACAATATTCGTAGTTGAAAGTTGAA 58.782 33.333 9.61 0.00 33.81 2.69
527 537 4.092968 GGATATCTGTCGTGACAAAACCAC 59.907 45.833 4.03 0.00 41.33 4.16
528 538 4.020573 AGGATATCTGTCGTGACAAAACCA 60.021 41.667 4.03 0.00 41.33 3.67
529 539 4.504858 AGGATATCTGTCGTGACAAAACC 58.495 43.478 4.03 4.27 41.33 3.27
530 540 4.265556 CGAGGATATCTGTCGTGACAAAAC 59.734 45.833 15.68 0.00 41.33 2.43
532 542 3.442625 ACGAGGATATCTGTCGTGACAAA 59.557 43.478 23.92 0.00 44.89 2.83
533 543 3.014623 ACGAGGATATCTGTCGTGACAA 58.985 45.455 23.92 0.00 44.89 3.18
534 544 2.640184 ACGAGGATATCTGTCGTGACA 58.360 47.619 23.92 2.28 44.89 3.58
535 545 4.808077 TTACGAGGATATCTGTCGTGAC 57.192 45.455 28.73 4.21 46.01 3.67
536 546 5.220989 CCTTTTACGAGGATATCTGTCGTGA 60.221 44.000 28.73 22.74 46.01 4.35
537 547 4.976731 CCTTTTACGAGGATATCTGTCGTG 59.023 45.833 28.73 18.45 46.01 4.35
539 549 4.547532 CCCTTTTACGAGGATATCTGTCG 58.452 47.826 19.90 19.90 39.25 4.35
542 552 4.608948 AGCCCTTTTACGAGGATATCTG 57.391 45.455 2.05 0.00 39.25 2.90
544 554 6.099159 ACTTAGCCCTTTTACGAGGATATC 57.901 41.667 0.00 0.00 39.25 1.63
547 557 4.514401 CAACTTAGCCCTTTTACGAGGAT 58.486 43.478 0.00 0.00 39.25 3.24
548 558 3.867216 GCAACTTAGCCCTTTTACGAGGA 60.867 47.826 0.00 0.00 39.25 3.71
549 559 2.418976 GCAACTTAGCCCTTTTACGAGG 59.581 50.000 0.00 0.00 36.52 4.63
550 560 2.093783 CGCAACTTAGCCCTTTTACGAG 59.906 50.000 0.00 0.00 0.00 4.18
551 561 2.070783 CGCAACTTAGCCCTTTTACGA 58.929 47.619 0.00 0.00 0.00 3.43
552 562 2.070783 TCGCAACTTAGCCCTTTTACG 58.929 47.619 0.00 0.00 0.00 3.18
553 563 2.418976 CCTCGCAACTTAGCCCTTTTAC 59.581 50.000 0.00 0.00 0.00 2.01
554 564 2.706890 CCTCGCAACTTAGCCCTTTTA 58.293 47.619 0.00 0.00 0.00 1.52
555 565 1.534729 CCTCGCAACTTAGCCCTTTT 58.465 50.000 0.00 0.00 0.00 2.27
556 566 0.960861 GCCTCGCAACTTAGCCCTTT 60.961 55.000 0.00 0.00 0.00 3.11
557 567 1.377333 GCCTCGCAACTTAGCCCTT 60.377 57.895 0.00 0.00 0.00 3.95
558 568 2.269241 GCCTCGCAACTTAGCCCT 59.731 61.111 0.00 0.00 0.00 5.19
559 569 2.824489 GGCCTCGCAACTTAGCCC 60.824 66.667 0.00 0.00 37.66 5.19
560 570 1.440145 GATGGCCTCGCAACTTAGCC 61.440 60.000 3.32 0.00 44.13 3.93
561 571 1.766143 CGATGGCCTCGCAACTTAGC 61.766 60.000 3.32 0.00 41.14 3.09
562 572 2.301505 CGATGGCCTCGCAACTTAG 58.698 57.895 3.32 0.00 41.14 2.18
563 573 4.513519 CGATGGCCTCGCAACTTA 57.486 55.556 3.32 0.00 41.14 2.24
576 586 6.603237 TCAAAGTACCATCTATTTGCGATG 57.397 37.500 0.00 0.00 38.35 3.84
577 587 7.255242 CCATTCAAAGTACCATCTATTTGCGAT 60.255 37.037 0.00 0.00 33.64 4.58
578 588 6.038161 CCATTCAAAGTACCATCTATTTGCGA 59.962 38.462 0.00 0.00 33.64 5.10
579 589 6.201517 CCATTCAAAGTACCATCTATTTGCG 58.798 40.000 0.00 0.00 33.64 4.85
580 590 6.461509 CCCCATTCAAAGTACCATCTATTTGC 60.462 42.308 0.00 0.00 33.64 3.68
581 591 6.607198 ACCCCATTCAAAGTACCATCTATTTG 59.393 38.462 0.00 0.00 34.66 2.32
582 592 6.741724 ACCCCATTCAAAGTACCATCTATTT 58.258 36.000 0.00 0.00 0.00 1.40
583 593 6.341408 ACCCCATTCAAAGTACCATCTATT 57.659 37.500 0.00 0.00 0.00 1.73
584 594 5.994416 ACCCCATTCAAAGTACCATCTAT 57.006 39.130 0.00 0.00 0.00 1.98
585 595 5.251932 TCAACCCCATTCAAAGTACCATCTA 59.748 40.000 0.00 0.00 0.00 1.98
586 596 4.044065 TCAACCCCATTCAAAGTACCATCT 59.956 41.667 0.00 0.00 0.00 2.90
587 597 4.340617 TCAACCCCATTCAAAGTACCATC 58.659 43.478 0.00 0.00 0.00 3.51
588 598 4.396357 TCAACCCCATTCAAAGTACCAT 57.604 40.909 0.00 0.00 0.00 3.55
589 599 3.885976 TCAACCCCATTCAAAGTACCA 57.114 42.857 0.00 0.00 0.00 3.25
590 600 4.340617 TGATCAACCCCATTCAAAGTACC 58.659 43.478 0.00 0.00 0.00 3.34
591 601 5.253330 TCTGATCAACCCCATTCAAAGTAC 58.747 41.667 0.00 0.00 0.00 2.73
592 602 5.512942 TCTGATCAACCCCATTCAAAGTA 57.487 39.130 0.00 0.00 0.00 2.24
593 603 4.387026 TCTGATCAACCCCATTCAAAGT 57.613 40.909 0.00 0.00 0.00 2.66
594 604 5.473039 GTTTCTGATCAACCCCATTCAAAG 58.527 41.667 0.00 0.00 0.00 2.77
595 605 4.022416 CGTTTCTGATCAACCCCATTCAAA 60.022 41.667 0.00 0.00 0.00 2.69
596 606 3.505680 CGTTTCTGATCAACCCCATTCAA 59.494 43.478 0.00 0.00 0.00 2.69
597 607 3.081061 CGTTTCTGATCAACCCCATTCA 58.919 45.455 0.00 0.00 0.00 2.57
598 608 3.343617 TCGTTTCTGATCAACCCCATTC 58.656 45.455 0.00 0.00 0.00 2.67
599 609 3.433306 TCGTTTCTGATCAACCCCATT 57.567 42.857 0.00 0.00 0.00 3.16
600 610 3.009033 TCTTCGTTTCTGATCAACCCCAT 59.991 43.478 0.00 0.00 0.00 4.00
601 611 2.370519 TCTTCGTTTCTGATCAACCCCA 59.629 45.455 0.00 0.00 0.00 4.96
602 612 3.053831 TCTTCGTTTCTGATCAACCCC 57.946 47.619 0.00 0.00 0.00 4.95
603 613 3.813166 TGTTCTTCGTTTCTGATCAACCC 59.187 43.478 0.00 0.00 0.00 4.11
604 614 4.272504 TGTGTTCTTCGTTTCTGATCAACC 59.727 41.667 0.00 0.00 0.00 3.77
605 615 5.403897 TGTGTTCTTCGTTTCTGATCAAC 57.596 39.130 0.00 0.00 0.00 3.18
606 616 5.584649 ACTTGTGTTCTTCGTTTCTGATCAA 59.415 36.000 0.00 0.00 0.00 2.57
607 617 5.116180 ACTTGTGTTCTTCGTTTCTGATCA 58.884 37.500 0.00 0.00 0.00 2.92
608 618 5.659048 ACTTGTGTTCTTCGTTTCTGATC 57.341 39.130 0.00 0.00 0.00 2.92
609 619 6.436843 AAACTTGTGTTCTTCGTTTCTGAT 57.563 33.333 0.00 0.00 34.96 2.90
610 620 5.873179 AAACTTGTGTTCTTCGTTTCTGA 57.127 34.783 0.00 0.00 34.96 3.27
611 621 5.963586 GGTAAACTTGTGTTCTTCGTTTCTG 59.036 40.000 0.00 0.00 34.96 3.02
612 622 5.065602 GGGTAAACTTGTGTTCTTCGTTTCT 59.934 40.000 0.00 0.00 34.96 2.52
613 623 5.163733 TGGGTAAACTTGTGTTCTTCGTTTC 60.164 40.000 0.00 0.00 34.96 2.78
614 624 4.701171 TGGGTAAACTTGTGTTCTTCGTTT 59.299 37.500 0.00 0.00 34.96 3.60
615 625 4.263435 TGGGTAAACTTGTGTTCTTCGTT 58.737 39.130 0.00 0.00 34.96 3.85
616 626 3.875134 CTGGGTAAACTTGTGTTCTTCGT 59.125 43.478 0.00 0.00 34.96 3.85
617 627 3.250040 CCTGGGTAAACTTGTGTTCTTCG 59.750 47.826 0.00 0.00 34.96 3.79
618 628 4.204799 ACCTGGGTAAACTTGTGTTCTTC 58.795 43.478 0.00 0.00 34.96 2.87
619 629 4.245251 ACCTGGGTAAACTTGTGTTCTT 57.755 40.909 0.00 0.00 34.96 2.52
620 630 3.945640 ACCTGGGTAAACTTGTGTTCT 57.054 42.857 0.00 0.00 34.96 3.01
621 631 3.949113 TGAACCTGGGTAAACTTGTGTTC 59.051 43.478 0.00 0.00 34.96 3.18
622 632 3.970842 TGAACCTGGGTAAACTTGTGTT 58.029 40.909 0.00 0.00 38.16 3.32
623 633 3.655615 TGAACCTGGGTAAACTTGTGT 57.344 42.857 0.00 0.00 0.00 3.72
624 634 3.067601 GGTTGAACCTGGGTAAACTTGTG 59.932 47.826 11.76 0.00 34.73 3.33
625 635 3.293337 GGTTGAACCTGGGTAAACTTGT 58.707 45.455 11.76 0.00 34.73 3.16
626 636 2.626266 GGGTTGAACCTGGGTAAACTTG 59.374 50.000 14.87 0.00 38.64 3.16
627 637 2.425247 GGGGTTGAACCTGGGTAAACTT 60.425 50.000 14.87 0.00 38.64 2.66
628 638 1.146359 GGGGTTGAACCTGGGTAAACT 59.854 52.381 14.87 0.00 38.64 2.66
629 639 1.146359 AGGGGTTGAACCTGGGTAAAC 59.854 52.381 14.87 3.09 38.64 2.01
630 640 1.426215 GAGGGGTTGAACCTGGGTAAA 59.574 52.381 14.87 0.00 38.79 2.01
631 641 1.069775 GAGGGGTTGAACCTGGGTAA 58.930 55.000 14.87 0.00 38.79 2.85
632 642 0.104356 TGAGGGGTTGAACCTGGGTA 60.104 55.000 14.87 0.00 38.79 3.69
633 643 0.776080 ATGAGGGGTTGAACCTGGGT 60.776 55.000 14.87 0.00 38.79 4.51
634 644 0.323725 CATGAGGGGTTGAACCTGGG 60.324 60.000 14.87 0.00 38.79 4.45
635 645 0.323725 CCATGAGGGGTTGAACCTGG 60.324 60.000 14.87 9.67 38.79 4.45
636 646 0.405585 ACCATGAGGGGTTGAACCTG 59.594 55.000 14.87 3.93 42.91 4.00
637 647 0.405585 CACCATGAGGGGTTGAACCT 59.594 55.000 14.87 0.00 39.79 3.50
638 648 0.611896 CCACCATGAGGGGTTGAACC 60.612 60.000 5.62 5.62 39.79 3.62
639 649 0.404040 TCCACCATGAGGGGTTGAAC 59.596 55.000 0.00 0.00 39.79 3.18
640 650 0.698238 CTCCACCATGAGGGGTTGAA 59.302 55.000 0.00 0.00 39.79 2.69
641 651 1.207488 CCTCCACCATGAGGGGTTGA 61.207 60.000 0.00 0.00 46.85 3.18
642 652 1.304282 CCTCCACCATGAGGGGTTG 59.696 63.158 0.00 0.00 46.85 3.77
643 653 3.841078 CCTCCACCATGAGGGGTT 58.159 61.111 0.00 0.00 46.85 4.11
648 658 2.025887 AGGCTTTTACCTCCACCATGAG 60.026 50.000 0.00 0.00 33.62 2.90
649 659 1.992557 AGGCTTTTACCTCCACCATGA 59.007 47.619 0.00 0.00 33.62 3.07
650 660 2.514458 AGGCTTTTACCTCCACCATG 57.486 50.000 0.00 0.00 33.62 3.66
651 661 3.190439 AGTAGGCTTTTACCTCCACCAT 58.810 45.455 0.00 0.00 41.50 3.55
652 662 2.570302 GAGTAGGCTTTTACCTCCACCA 59.430 50.000 0.00 0.00 41.50 4.17
653 663 2.093075 GGAGTAGGCTTTTACCTCCACC 60.093 54.545 0.00 0.00 41.50 4.61
654 664 2.838813 AGGAGTAGGCTTTTACCTCCAC 59.161 50.000 14.89 0.00 41.50 4.02
655 665 2.838202 CAGGAGTAGGCTTTTACCTCCA 59.162 50.000 14.89 0.00 41.50 3.86
656 666 2.420269 GCAGGAGTAGGCTTTTACCTCC 60.420 54.545 0.00 0.40 41.50 4.30
657 667 2.502130 AGCAGGAGTAGGCTTTTACCTC 59.498 50.000 0.00 0.00 41.50 3.85
658 668 2.552367 AGCAGGAGTAGGCTTTTACCT 58.448 47.619 0.00 0.00 44.31 3.08
665 675 2.191400 TCAATCAAGCAGGAGTAGGCT 58.809 47.619 0.00 0.00 43.46 4.58
666 676 2.698855 TCAATCAAGCAGGAGTAGGC 57.301 50.000 0.00 0.00 0.00 3.93
667 677 6.528321 TCAATATCAATCAAGCAGGAGTAGG 58.472 40.000 0.00 0.00 0.00 3.18
668 678 8.504815 CAATCAATATCAATCAAGCAGGAGTAG 58.495 37.037 0.00 0.00 0.00 2.57
669 679 7.994911 ACAATCAATATCAATCAAGCAGGAGTA 59.005 33.333 0.00 0.00 0.00 2.59
670 680 6.832384 ACAATCAATATCAATCAAGCAGGAGT 59.168 34.615 0.00 0.00 0.00 3.85
671 681 7.139392 CACAATCAATATCAATCAAGCAGGAG 58.861 38.462 0.00 0.00 0.00 3.69
672 682 6.040054 CCACAATCAATATCAATCAAGCAGGA 59.960 38.462 0.00 0.00 0.00 3.86
673 683 6.183360 ACCACAATCAATATCAATCAAGCAGG 60.183 38.462 0.00 0.00 0.00 4.85
674 684 6.695713 CACCACAATCAATATCAATCAAGCAG 59.304 38.462 0.00 0.00 0.00 4.24
675 685 6.377712 TCACCACAATCAATATCAATCAAGCA 59.622 34.615 0.00 0.00 0.00 3.91
676 686 6.798482 TCACCACAATCAATATCAATCAAGC 58.202 36.000 0.00 0.00 0.00 4.01
677 687 8.847196 AGATCACCACAATCAATATCAATCAAG 58.153 33.333 0.00 0.00 0.00 3.02
678 688 8.756486 AGATCACCACAATCAATATCAATCAA 57.244 30.769 0.00 0.00 0.00 2.57
679 689 8.626526 CAAGATCACCACAATCAATATCAATCA 58.373 33.333 0.00 0.00 0.00 2.57
680 690 8.843262 TCAAGATCACCACAATCAATATCAATC 58.157 33.333 0.00 0.00 0.00 2.67
681 691 8.756486 TCAAGATCACCACAATCAATATCAAT 57.244 30.769 0.00 0.00 0.00 2.57
682 692 8.756486 ATCAAGATCACCACAATCAATATCAA 57.244 30.769 0.00 0.00 0.00 2.57
683 693 8.756486 AATCAAGATCACCACAATCAATATCA 57.244 30.769 0.00 0.00 0.00 2.15
686 696 9.904198 TTCTAATCAAGATCACCACAATCAATA 57.096 29.630 0.00 0.00 33.05 1.90
687 697 8.812513 TTCTAATCAAGATCACCACAATCAAT 57.187 30.769 0.00 0.00 33.05 2.57
688 698 7.337689 CCTTCTAATCAAGATCACCACAATCAA 59.662 37.037 0.00 0.00 33.05 2.57
689 699 6.825213 CCTTCTAATCAAGATCACCACAATCA 59.175 38.462 0.00 0.00 33.05 2.57
690 700 7.011857 GTCCTTCTAATCAAGATCACCACAATC 59.988 40.741 0.00 0.00 33.05 2.67
691 701 6.825721 GTCCTTCTAATCAAGATCACCACAAT 59.174 38.462 0.00 0.00 33.05 2.71
692 702 6.013379 AGTCCTTCTAATCAAGATCACCACAA 60.013 38.462 0.00 0.00 33.05 3.33
693 703 5.485353 AGTCCTTCTAATCAAGATCACCACA 59.515 40.000 0.00 0.00 33.05 4.17
694 704 5.983540 AGTCCTTCTAATCAAGATCACCAC 58.016 41.667 0.00 0.00 33.05 4.16
695 705 6.627087 AAGTCCTTCTAATCAAGATCACCA 57.373 37.500 0.00 0.00 33.05 4.17
696 706 7.787028 AGTAAGTCCTTCTAATCAAGATCACC 58.213 38.462 0.00 0.00 33.05 4.02
697 707 9.660180 AAAGTAAGTCCTTCTAATCAAGATCAC 57.340 33.333 0.00 0.00 33.05 3.06
700 710 8.951243 GCAAAAGTAAGTCCTTCTAATCAAGAT 58.049 33.333 0.00 0.00 33.05 2.40
701 711 8.157476 AGCAAAAGTAAGTCCTTCTAATCAAGA 58.843 33.333 0.00 0.00 0.00 3.02
702 712 8.233190 CAGCAAAAGTAAGTCCTTCTAATCAAG 58.767 37.037 0.00 0.00 0.00 3.02
703 713 7.308589 GCAGCAAAAGTAAGTCCTTCTAATCAA 60.309 37.037 0.00 0.00 0.00 2.57
704 714 6.149474 GCAGCAAAAGTAAGTCCTTCTAATCA 59.851 38.462 0.00 0.00 0.00 2.57
705 715 6.547283 GCAGCAAAAGTAAGTCCTTCTAATC 58.453 40.000 0.00 0.00 0.00 1.75
706 716 5.122396 CGCAGCAAAAGTAAGTCCTTCTAAT 59.878 40.000 0.00 0.00 0.00 1.73
707 717 4.451096 CGCAGCAAAAGTAAGTCCTTCTAA 59.549 41.667 0.00 0.00 0.00 2.10
708 718 3.994392 CGCAGCAAAAGTAAGTCCTTCTA 59.006 43.478 0.00 0.00 0.00 2.10
709 719 2.808543 CGCAGCAAAAGTAAGTCCTTCT 59.191 45.455 0.00 0.00 0.00 2.85
710 720 2.806244 TCGCAGCAAAAGTAAGTCCTTC 59.194 45.455 0.00 0.00 0.00 3.46
711 721 2.808543 CTCGCAGCAAAAGTAAGTCCTT 59.191 45.455 0.00 0.00 0.00 3.36
712 722 2.417719 CTCGCAGCAAAAGTAAGTCCT 58.582 47.619 0.00 0.00 0.00 3.85
713 723 1.135944 GCTCGCAGCAAAAGTAAGTCC 60.136 52.381 0.00 0.00 41.89 3.85
714 724 1.801178 AGCTCGCAGCAAAAGTAAGTC 59.199 47.619 10.16 0.00 45.56 3.01
715 725 1.884235 AGCTCGCAGCAAAAGTAAGT 58.116 45.000 10.16 0.00 45.56 2.24
716 726 2.977405 AAGCTCGCAGCAAAAGTAAG 57.023 45.000 10.16 0.00 45.56 2.34
717 727 2.349438 CGAAAGCTCGCAGCAAAAGTAA 60.349 45.455 10.16 0.00 45.56 2.24
718 728 1.194547 CGAAAGCTCGCAGCAAAAGTA 59.805 47.619 10.16 0.00 45.56 2.24
719 729 0.040958 CGAAAGCTCGCAGCAAAAGT 60.041 50.000 10.16 0.00 45.56 2.66
720 730 0.235665 TCGAAAGCTCGCAGCAAAAG 59.764 50.000 10.16 0.00 45.56 2.27
721 731 0.235665 CTCGAAAGCTCGCAGCAAAA 59.764 50.000 10.16 0.00 45.56 2.44
722 732 0.599991 TCTCGAAAGCTCGCAGCAAA 60.600 50.000 10.16 0.00 45.56 3.68
723 733 1.006220 TCTCGAAAGCTCGCAGCAA 60.006 52.632 10.16 0.00 45.56 3.91
724 734 1.445066 CTCTCGAAAGCTCGCAGCA 60.445 57.895 10.16 0.00 45.56 4.41
725 735 1.011451 AACTCTCGAAAGCTCGCAGC 61.011 55.000 0.00 0.47 45.04 5.25
726 736 1.388431 GAAACTCTCGAAAGCTCGCAG 59.612 52.381 0.00 0.00 45.04 5.18
727 737 1.000163 AGAAACTCTCGAAAGCTCGCA 60.000 47.619 0.00 0.00 45.04 5.10
728 738 1.704070 AGAAACTCTCGAAAGCTCGC 58.296 50.000 0.00 0.00 45.04 5.03
729 739 4.477780 AGTTAGAAACTCTCGAAAGCTCG 58.522 43.478 0.00 0.00 41.41 5.03
730 740 5.692654 ACAAGTTAGAAACTCTCGAAAGCTC 59.307 40.000 0.00 0.00 41.91 4.09
731 741 5.602628 ACAAGTTAGAAACTCTCGAAAGCT 58.397 37.500 0.00 0.00 41.91 3.74
732 742 5.908916 ACAAGTTAGAAACTCTCGAAAGC 57.091 39.130 0.00 0.00 41.91 3.51
737 747 9.302773 CGAAAAATAACAAGTTAGAAACTCTCG 57.697 33.333 0.00 0.00 41.91 4.04
740 750 9.378597 GGACGAAAAATAACAAGTTAGAAACTC 57.621 33.333 0.00 0.00 41.91 3.01
741 751 8.347771 GGGACGAAAAATAACAAGTTAGAAACT 58.652 33.333 0.00 0.00 45.46 2.66
742 752 8.130469 TGGGACGAAAAATAACAAGTTAGAAAC 58.870 33.333 0.00 0.00 0.00 2.78
743 753 8.223177 TGGGACGAAAAATAACAAGTTAGAAA 57.777 30.769 0.00 0.00 0.00 2.52
744 754 7.040961 CCTGGGACGAAAAATAACAAGTTAGAA 60.041 37.037 0.00 0.00 0.00 2.10
745 755 6.428771 CCTGGGACGAAAAATAACAAGTTAGA 59.571 38.462 0.00 0.00 0.00 2.10
746 756 6.428771 TCCTGGGACGAAAAATAACAAGTTAG 59.571 38.462 0.00 0.00 0.00 2.34
747 757 6.297582 TCCTGGGACGAAAAATAACAAGTTA 58.702 36.000 0.00 0.00 0.00 2.24
748 758 5.134661 TCCTGGGACGAAAAATAACAAGTT 58.865 37.500 0.00 0.00 0.00 2.66
749 759 4.721132 TCCTGGGACGAAAAATAACAAGT 58.279 39.130 0.00 0.00 0.00 3.16
750 760 5.240844 AGTTCCTGGGACGAAAAATAACAAG 59.759 40.000 0.00 0.00 0.00 3.16
751 761 5.134661 AGTTCCTGGGACGAAAAATAACAA 58.865 37.500 0.00 0.00 0.00 2.83
752 762 4.721132 AGTTCCTGGGACGAAAAATAACA 58.279 39.130 0.00 0.00 0.00 2.41
753 763 5.001874 AGAGTTCCTGGGACGAAAAATAAC 58.998 41.667 0.00 0.00 0.00 1.89
754 764 5.237236 AGAGTTCCTGGGACGAAAAATAA 57.763 39.130 0.00 0.00 0.00 1.40
755 765 4.323257 GGAGAGTTCCTGGGACGAAAAATA 60.323 45.833 0.00 0.00 40.58 1.40
756 766 3.559384 GGAGAGTTCCTGGGACGAAAAAT 60.559 47.826 0.00 0.00 40.58 1.82
757 767 2.224450 GGAGAGTTCCTGGGACGAAAAA 60.224 50.000 0.00 0.00 40.58 1.94
758 768 1.346722 GGAGAGTTCCTGGGACGAAAA 59.653 52.381 0.00 0.00 40.58 2.29
759 769 0.974383 GGAGAGTTCCTGGGACGAAA 59.026 55.000 0.00 0.00 40.58 3.46
760 770 2.667348 GGAGAGTTCCTGGGACGAA 58.333 57.895 0.00 0.00 40.58 3.85
761 771 4.436368 GGAGAGTTCCTGGGACGA 57.564 61.111 0.00 0.00 40.58 4.20
769 779 1.339535 CCAAGCCAGAAGGAGAGTTCC 60.340 57.143 0.00 0.00 44.39 3.62
770 780 1.349357 ACCAAGCCAGAAGGAGAGTTC 59.651 52.381 0.00 0.00 36.89 3.01
771 781 1.439543 ACCAAGCCAGAAGGAGAGTT 58.560 50.000 0.00 0.00 36.89 3.01
772 782 1.439543 AACCAAGCCAGAAGGAGAGT 58.560 50.000 0.00 0.00 36.89 3.24
773 783 2.431454 GAAACCAAGCCAGAAGGAGAG 58.569 52.381 0.00 0.00 36.89 3.20
774 784 1.073923 GGAAACCAAGCCAGAAGGAGA 59.926 52.381 0.00 0.00 36.89 3.71
775 785 1.074566 AGGAAACCAAGCCAGAAGGAG 59.925 52.381 0.00 0.00 36.89 3.69
776 786 1.149101 AGGAAACCAAGCCAGAAGGA 58.851 50.000 0.00 0.00 36.89 3.36
777 787 2.001076 AAGGAAACCAAGCCAGAAGG 57.999 50.000 0.00 0.00 38.23 3.46
778 788 2.958355 TCAAAGGAAACCAAGCCAGAAG 59.042 45.455 0.00 0.00 0.00 2.85
779 789 2.958355 CTCAAAGGAAACCAAGCCAGAA 59.042 45.455 0.00 0.00 0.00 3.02
780 790 2.586425 CTCAAAGGAAACCAAGCCAGA 58.414 47.619 0.00 0.00 0.00 3.86
781 791 1.615392 CCTCAAAGGAAACCAAGCCAG 59.385 52.381 0.00 0.00 37.67 4.85
782 792 1.703411 CCTCAAAGGAAACCAAGCCA 58.297 50.000 0.00 0.00 37.67 4.75
783 793 0.318441 GCCTCAAAGGAAACCAAGCC 59.682 55.000 0.00 0.00 37.67 4.35
784 794 0.318441 GGCCTCAAAGGAAACCAAGC 59.682 55.000 0.00 0.00 37.67 4.01
785 795 0.969149 GGGCCTCAAAGGAAACCAAG 59.031 55.000 0.84 0.00 37.67 3.61
786 796 0.825840 CGGGCCTCAAAGGAAACCAA 60.826 55.000 0.84 0.00 37.67 3.67
787 797 1.228429 CGGGCCTCAAAGGAAACCA 60.228 57.895 0.84 0.00 37.67 3.67
788 798 0.538746 TTCGGGCCTCAAAGGAAACC 60.539 55.000 0.84 0.00 37.67 3.27
789 799 1.269723 CTTTCGGGCCTCAAAGGAAAC 59.730 52.381 15.52 0.00 37.67 2.78
790 800 1.133606 ACTTTCGGGCCTCAAAGGAAA 60.134 47.619 23.02 13.37 37.67 3.13
791 801 0.476771 ACTTTCGGGCCTCAAAGGAA 59.523 50.000 23.02 7.34 37.67 3.36
792 802 1.278127 CTACTTTCGGGCCTCAAAGGA 59.722 52.381 23.02 17.21 37.67 3.36
793 803 1.003233 ACTACTTTCGGGCCTCAAAGG 59.997 52.381 23.02 13.23 38.80 3.11
794 804 2.076863 CACTACTTTCGGGCCTCAAAG 58.923 52.381 19.60 19.60 35.97 2.77
795 805 1.880646 GCACTACTTTCGGGCCTCAAA 60.881 52.381 0.84 0.63 0.00 2.69
796 806 0.321298 GCACTACTTTCGGGCCTCAA 60.321 55.000 0.84 0.00 0.00 3.02
797 807 1.295423 GCACTACTTTCGGGCCTCA 59.705 57.895 0.84 0.00 0.00 3.86
798 808 1.810030 CGCACTACTTTCGGGCCTC 60.810 63.158 0.84 0.00 0.00 4.70
799 809 2.264794 CGCACTACTTTCGGGCCT 59.735 61.111 0.84 0.00 0.00 5.19
800 810 2.098831 GTCGCACTACTTTCGGGCC 61.099 63.158 0.00 0.00 0.00 5.80
801 811 1.077089 GAGTCGCACTACTTTCGGGC 61.077 60.000 0.00 0.00 0.00 6.13
802 812 0.242825 TGAGTCGCACTACTTTCGGG 59.757 55.000 0.00 0.00 0.00 5.14
803 813 1.337821 GTGAGTCGCACTACTTTCGG 58.662 55.000 0.00 0.00 44.27 4.30
813 823 0.033920 AACATGCTCTGTGAGTCGCA 59.966 50.000 6.17 6.17 38.39 5.10
814 824 1.151668 AAACATGCTCTGTGAGTCGC 58.848 50.000 0.00 0.00 38.39 5.19
815 825 2.926200 CCTAAACATGCTCTGTGAGTCG 59.074 50.000 0.00 0.00 38.39 4.18
816 826 4.193826 TCCTAAACATGCTCTGTGAGTC 57.806 45.455 0.00 0.00 38.39 3.36
817 827 4.833478 ATCCTAAACATGCTCTGTGAGT 57.167 40.909 0.00 0.00 38.39 3.41
818 828 5.525378 GGTAATCCTAAACATGCTCTGTGAG 59.475 44.000 0.00 0.00 38.39 3.51
819 829 5.045942 TGGTAATCCTAAACATGCTCTGTGA 60.046 40.000 0.00 0.00 34.64 3.58
820 830 5.185454 TGGTAATCCTAAACATGCTCTGTG 58.815 41.667 0.00 0.00 34.64 3.66
821 831 5.431765 CTGGTAATCCTAAACATGCTCTGT 58.568 41.667 0.00 0.00 35.43 3.41
822 832 4.818546 CCTGGTAATCCTAAACATGCTCTG 59.181 45.833 0.00 0.00 34.23 3.35
823 833 4.687219 GCCTGGTAATCCTAAACATGCTCT 60.687 45.833 0.00 0.00 34.23 4.09
824 834 3.565902 GCCTGGTAATCCTAAACATGCTC 59.434 47.826 0.00 0.00 34.23 4.26
825 835 3.203040 AGCCTGGTAATCCTAAACATGCT 59.797 43.478 0.00 0.00 34.23 3.79
826 836 3.555966 AGCCTGGTAATCCTAAACATGC 58.444 45.455 0.00 0.00 34.23 4.06
827 837 3.809832 CGAGCCTGGTAATCCTAAACATG 59.190 47.826 0.00 0.00 34.23 3.21
828 838 3.181454 CCGAGCCTGGTAATCCTAAACAT 60.181 47.826 0.00 0.00 34.23 2.71
829 839 2.169769 CCGAGCCTGGTAATCCTAAACA 59.830 50.000 0.00 0.00 34.23 2.83
830 840 2.484947 CCCGAGCCTGGTAATCCTAAAC 60.485 54.545 0.00 0.00 34.23 2.01
831 841 1.766496 CCCGAGCCTGGTAATCCTAAA 59.234 52.381 0.00 0.00 34.23 1.85
832 842 1.420430 CCCGAGCCTGGTAATCCTAA 58.580 55.000 0.00 0.00 34.23 2.69
833 843 0.471211 CCCCGAGCCTGGTAATCCTA 60.471 60.000 0.00 0.00 34.23 2.94
834 844 1.766461 CCCCGAGCCTGGTAATCCT 60.766 63.158 0.00 0.00 34.23 3.24
835 845 2.829592 CCCCGAGCCTGGTAATCC 59.170 66.667 0.00 0.00 0.00 3.01
836 846 2.111251 GCCCCGAGCCTGGTAATC 59.889 66.667 0.00 0.00 34.35 1.75
849 859 3.468140 GTAGTGAGACCCGGCCCC 61.468 72.222 0.00 0.00 0.00 5.80
850 860 3.834799 CGTAGTGAGACCCGGCCC 61.835 72.222 0.00 0.00 0.00 5.80
851 861 3.066814 ACGTAGTGAGACCCGGCC 61.067 66.667 0.00 0.00 42.51 6.13
872 882 1.755393 ATATTCCCCACGGGCGAGAC 61.755 60.000 0.00 0.00 43.94 3.36
873 883 1.458777 ATATTCCCCACGGGCGAGA 60.459 57.895 0.00 0.00 43.94 4.04
874 884 1.004918 GATATTCCCCACGGGCGAG 60.005 63.158 0.00 0.00 43.94 5.03
875 885 2.513259 GGATATTCCCCACGGGCGA 61.513 63.158 0.00 0.00 43.94 5.54
876 886 2.032071 GGATATTCCCCACGGGCG 59.968 66.667 0.00 0.00 43.94 6.13
885 895 4.212636 CACGGTATTTGTTCGGGATATTCC 59.787 45.833 0.00 0.00 35.23 3.01
886 896 4.812626 ACACGGTATTTGTTCGGGATATTC 59.187 41.667 0.00 0.00 0.00 1.75
887 897 4.773013 ACACGGTATTTGTTCGGGATATT 58.227 39.130 0.00 0.00 0.00 1.28
888 898 4.411256 ACACGGTATTTGTTCGGGATAT 57.589 40.909 0.00 0.00 0.00 1.63
889 899 3.891422 ACACGGTATTTGTTCGGGATA 57.109 42.857 0.00 0.00 0.00 2.59
890 900 2.773993 ACACGGTATTTGTTCGGGAT 57.226 45.000 0.00 0.00 0.00 3.85
891 901 2.415776 GAACACGGTATTTGTTCGGGA 58.584 47.619 0.76 0.00 42.48 5.14
892 902 2.886587 GAACACGGTATTTGTTCGGG 57.113 50.000 0.76 0.00 42.48 5.14
965 975 7.330946 GGCTGTGTCTTGCAAATATATATCGTA 59.669 37.037 0.00 0.00 0.00 3.43
967 977 6.147656 TGGCTGTGTCTTGCAAATATATATCG 59.852 38.462 0.00 0.00 0.00 2.92
968 978 7.439157 TGGCTGTGTCTTGCAAATATATATC 57.561 36.000 0.00 0.00 0.00 1.63
969 979 7.822161 TTGGCTGTGTCTTGCAAATATATAT 57.178 32.000 0.00 0.00 0.00 0.86
970 980 7.637631 TTTGGCTGTGTCTTGCAAATATATA 57.362 32.000 0.00 0.00 0.00 0.86
971 981 6.528537 TTTGGCTGTGTCTTGCAAATATAT 57.471 33.333 0.00 0.00 0.00 0.86
973 983 4.870123 TTTGGCTGTGTCTTGCAAATAT 57.130 36.364 0.00 0.00 0.00 1.28
974 984 4.619973 CTTTTGGCTGTGTCTTGCAAATA 58.380 39.130 0.00 0.00 0.00 1.40
975 985 3.460103 CTTTTGGCTGTGTCTTGCAAAT 58.540 40.909 0.00 0.00 0.00 2.32
976 986 2.891112 CTTTTGGCTGTGTCTTGCAAA 58.109 42.857 0.00 0.00 0.00 3.68
977 987 1.471327 GCTTTTGGCTGTGTCTTGCAA 60.471 47.619 0.00 0.00 38.06 4.08
978 988 0.102844 GCTTTTGGCTGTGTCTTGCA 59.897 50.000 0.00 0.00 38.06 4.08
979 989 0.598419 GGCTTTTGGCTGTGTCTTGC 60.598 55.000 0.00 0.00 42.31 4.01
980 990 0.032540 GGGCTTTTGGCTGTGTCTTG 59.967 55.000 0.00 0.00 45.25 3.02
988 998 1.543944 CCGGAAATGGGCTTTTGGCT 61.544 55.000 0.00 0.00 45.25 4.75
1007 1017 4.294232 GCTCTGCCTTCTCTTTTGTTTTC 58.706 43.478 0.00 0.00 0.00 2.29
1058 1068 9.267084 GTCCACAAAATAATTTTCTTTAGGCAA 57.733 29.630 0.00 0.00 0.00 4.52
1059 1069 7.875554 GGTCCACAAAATAATTTTCTTTAGGCA 59.124 33.333 0.00 0.00 0.00 4.75
1065 1075 7.508977 TGGAGAGGTCCACAAAATAATTTTCTT 59.491 33.333 0.00 0.00 46.77 2.52
1066 1076 7.010160 TGGAGAGGTCCACAAAATAATTTTCT 58.990 34.615 0.00 0.00 46.77 2.52
1067 1077 7.227049 TGGAGAGGTCCACAAAATAATTTTC 57.773 36.000 0.00 0.00 46.77 2.29
1068 1078 6.211384 CCTGGAGAGGTCCACAAAATAATTTT 59.789 38.462 0.00 0.00 46.77 1.82
1069 1079 5.716703 CCTGGAGAGGTCCACAAAATAATTT 59.283 40.000 0.00 0.00 46.77 1.82
1070 1080 5.264395 CCTGGAGAGGTCCACAAAATAATT 58.736 41.667 0.00 0.00 46.77 1.40
1072 1082 4.301072 CCTGGAGAGGTCCACAAAATAA 57.699 45.455 0.00 0.00 46.77 1.40
1074 1084 2.887151 CCTGGAGAGGTCCACAAAAT 57.113 50.000 0.00 0.00 46.77 1.82
1127 1140 4.056125 GCGGTTTTGGAGCCTGGC 62.056 66.667 11.65 11.65 0.00 4.85
1672 1700 1.432514 CGAGCAGTGTGTTGTAGCAT 58.567 50.000 0.00 0.00 0.00 3.79
1770 1798 1.358103 TGTAGGTGTAGGAGTCAGGCT 59.642 52.381 0.00 0.00 0.00 4.58
1877 1905 2.590092 CCCCATCCTCCGGAACAC 59.410 66.667 5.23 0.00 34.34 3.32
1992 2020 1.177401 GCACCCCTTCTTCACCATTC 58.823 55.000 0.00 0.00 0.00 2.67
2072 2100 4.521146 CTCATCCACTCAATAGCCTTGTT 58.479 43.478 0.00 0.00 0.00 2.83
2211 2239 2.843545 GGAGGTGCCCACTTTCCA 59.156 61.111 13.70 0.00 36.09 3.53
2227 2255 1.131303 TGTAGGTGTGTTCCCTGGGG 61.131 60.000 14.00 2.42 33.35 4.96
2320 2348 2.232208 CTGAAACCTTTCCTTGATGCCC 59.768 50.000 0.00 0.00 36.36 5.36
2344 2372 2.779755 TGGGTTTCATACGCATGACT 57.220 45.000 0.00 0.00 43.90 3.41
2380 2408 6.098679 CCTCGATGTTGATCCTGATTATCTC 58.901 44.000 0.00 0.00 0.00 2.75
2400 2428 3.181505 TGTGTTAAGTTTGCACAACCTCG 60.182 43.478 8.98 0.00 39.76 4.63
2450 2478 4.386088 CCCCTTGGACATCTCAATCAAGAT 60.386 45.833 0.00 0.00 37.57 2.40
2576 2604 7.062957 TCATTTTCATCTAGAGATTTTCCCCC 58.937 38.462 0.00 0.00 31.21 5.40
2587 2615 6.769822 GGGCTTCATTCTCATTTTCATCTAGA 59.230 38.462 0.00 0.00 0.00 2.43
2590 2618 5.266788 TGGGCTTCATTCTCATTTTCATCT 58.733 37.500 0.00 0.00 0.00 2.90
2604 2632 1.047801 GGTGGTGTTTTGGGCTTCAT 58.952 50.000 0.00 0.00 0.00 2.57
2713 2742 3.181487 ACAGCAATTATTCCCGCATCAAC 60.181 43.478 0.00 0.00 0.00 3.18
2887 2916 1.550327 TGTGTAGGCCTGAGTGAGAG 58.450 55.000 17.99 0.00 0.00 3.20
2894 2923 0.249120 CCGAACATGTGTAGGCCTGA 59.751 55.000 17.99 0.00 0.00 3.86
2912 2941 5.453567 AATTTCTGCAACTCTGGTAAACC 57.546 39.130 0.00 0.00 0.00 3.27
2936 2966 8.439286 GCACAGAAAACACAAAATTTCACTAAA 58.561 29.630 0.00 0.00 37.87 1.85
2939 2969 5.931146 TGCACAGAAAACACAAAATTTCACT 59.069 32.000 0.00 0.00 37.87 3.41
2985 3015 3.754323 ACATTGATGCCATTGCCAAAAAG 59.246 39.130 0.00 0.00 36.33 2.27
3012 3042 9.530633 GAAAATACCGACTTCTAACATATCTGT 57.469 33.333 0.00 0.00 37.12 3.41
3036 3068 8.902540 ATCTCAAACATTATATAGCAACGGAA 57.097 30.769 0.00 0.00 0.00 4.30
3058 3090 1.246649 TGCGCATGTTCACCAAATCT 58.753 45.000 5.66 0.00 0.00 2.40
3117 3150 8.103305 ACAGTAAAGAATGTGTGACCTTCATAT 58.897 33.333 0.00 0.00 0.00 1.78
3173 3206 6.869913 TGTAGAAATGGTACCTTTGTAAGTCG 59.130 38.462 14.36 0.00 0.00 4.18
3214 3247 6.811170 TGTTGTTCTTCAAATTCCAAGTTCAC 59.189 34.615 0.00 0.00 37.81 3.18
3221 3254 5.163457 GGTCCTTGTTGTTCTTCAAATTCCA 60.163 40.000 0.00 0.00 37.81 3.53
3227 3260 4.229304 TGAGGTCCTTGTTGTTCTTCAA 57.771 40.909 0.00 0.00 0.00 2.69
3230 3263 5.993748 TTTTTGAGGTCCTTGTTGTTCTT 57.006 34.783 0.00 0.00 0.00 2.52
3232 3265 7.489160 ACTAATTTTTGAGGTCCTTGTTGTTC 58.511 34.615 0.00 0.00 0.00 3.18
3246 3279 7.489435 TGTGCGATTTGTGAAACTAATTTTTGA 59.511 29.630 0.00 0.00 42.17 2.69
3292 3325 7.147976 TGACGGATCAGTATAAATCATCTGTG 58.852 38.462 0.00 0.00 33.99 3.66
3679 3712 4.772886 AGCAAACCCTAATATCCTCGTT 57.227 40.909 0.00 0.00 0.00 3.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.