Multiple sequence alignment - TraesCS4B01G065400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G065400 chr4B 100.000 6619 0 0 1 6619 58230003 58236621 0.000000e+00 12224.0
1 TraesCS4B01G065400 chr4B 87.234 282 31 4 5769 6045 58241018 58241299 3.850000e-82 316.0
2 TraesCS4B01G065400 chr4A 95.760 5424 176 20 667 6060 560416551 560411152 0.000000e+00 8693.0
3 TraesCS4B01G065400 chr4D 95.808 3745 120 20 2300 6016 39854022 39857757 0.000000e+00 6011.0
4 TraesCS4B01G065400 chr4D 95.243 1051 34 4 1260 2298 39852811 39853857 0.000000e+00 1650.0
5 TraesCS4B01G065400 chr4D 97.263 475 8 4 599 1073 39852049 39852518 0.000000e+00 800.0
6 TraesCS4B01G065400 chr4D 83.041 171 18 8 6060 6220 39857822 39857991 1.920000e-30 145.0
7 TraesCS4B01G065400 chr4D 88.889 54 6 0 6382 6435 291724904 291724851 4.280000e-07 67.6
8 TraesCS4B01G065400 chr6D 91.332 623 29 9 3 600 422297667 422298289 0.000000e+00 828.0
9 TraesCS4B01G065400 chr6D 85.393 623 68 9 1 600 73814206 73814828 5.640000e-175 625.0
10 TraesCS4B01G065400 chr6D 85.135 74 9 2 6406 6478 223927552 223927480 2.560000e-09 75.0
11 TraesCS4B01G065400 chr5B 89.338 619 42 2 1 596 482490740 482491357 0.000000e+00 756.0
12 TraesCS4B01G065400 chr6A 85.920 625 64 4 1 601 496369633 496370257 0.000000e+00 645.0
13 TraesCS4B01G065400 chr6A 83.615 592 69 15 35 600 599758118 599758707 1.260000e-146 531.0
14 TraesCS4B01G065400 chr6A 82.090 134 20 4 6489 6619 223563513 223563381 1.950000e-20 111.0
15 TraesCS4B01G065400 chr6A 87.500 72 7 2 6409 6479 277186578 277186508 1.530000e-11 82.4
16 TraesCS4B01G065400 chr6A 85.938 64 9 0 6418 6481 277156002 277155939 1.190000e-07 69.4
17 TraesCS4B01G065400 chr5A 84.516 620 73 6 1 597 387390946 387390327 5.720000e-165 592.0
18 TraesCS4B01G065400 chr7A 84.109 623 74 11 4 601 62032611 62031989 4.450000e-161 579.0
19 TraesCS4B01G065400 chr7B 79.840 625 96 13 1 600 272717648 272718267 4.740000e-116 429.0
20 TraesCS4B01G065400 chr7B 82.517 143 21 4 6480 6619 94281679 94281820 9.010000e-24 122.0
21 TraesCS4B01G065400 chr7D 87.854 247 30 0 354 600 562201816 562202062 2.330000e-74 291.0
22 TraesCS4B01G065400 chr1A 82.051 117 17 3 6364 6478 481973849 481973963 5.460000e-16 97.1
23 TraesCS4B01G065400 chr2B 93.333 60 4 0 6382 6441 168606657 168606716 9.140000e-14 89.8
24 TraesCS4B01G065400 chr2B 88.235 68 6 1 6383 6448 799307016 799307083 5.500000e-11 80.5
25 TraesCS4B01G065400 chr3B 87.302 63 7 1 6382 6444 528716867 528716928 3.310000e-08 71.3
26 TraesCS4B01G065400 chr3A 84.615 65 8 2 6384 6448 349460933 349460871 5.540000e-06 63.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G065400 chr4B 58230003 58236621 6618 False 12224.0 12224 100.00000 1 6619 1 chr4B.!!$F1 6618
1 TraesCS4B01G065400 chr4A 560411152 560416551 5399 True 8693.0 8693 95.76000 667 6060 1 chr4A.!!$R1 5393
2 TraesCS4B01G065400 chr4D 39852049 39857991 5942 False 2151.5 6011 92.83875 599 6220 4 chr4D.!!$F1 5621
3 TraesCS4B01G065400 chr6D 422297667 422298289 622 False 828.0 828 91.33200 3 600 1 chr6D.!!$F2 597
4 TraesCS4B01G065400 chr6D 73814206 73814828 622 False 625.0 625 85.39300 1 600 1 chr6D.!!$F1 599
5 TraesCS4B01G065400 chr5B 482490740 482491357 617 False 756.0 756 89.33800 1 596 1 chr5B.!!$F1 595
6 TraesCS4B01G065400 chr6A 496369633 496370257 624 False 645.0 645 85.92000 1 601 1 chr6A.!!$F1 600
7 TraesCS4B01G065400 chr6A 599758118 599758707 589 False 531.0 531 83.61500 35 600 1 chr6A.!!$F2 565
8 TraesCS4B01G065400 chr5A 387390327 387390946 619 True 592.0 592 84.51600 1 597 1 chr5A.!!$R1 596
9 TraesCS4B01G065400 chr7A 62031989 62032611 622 True 579.0 579 84.10900 4 601 1 chr7A.!!$R1 597
10 TraesCS4B01G065400 chr7B 272717648 272718267 619 False 429.0 429 79.84000 1 600 1 chr7B.!!$F2 599

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
717 744 0.035739 TCAAGCCCACTAAACCCGTC 59.964 55.000 0.0 0.00 0.00 4.79 F
863 890 0.176449 TGAGCATCATCACACCCTCG 59.824 55.000 0.0 0.00 42.56 4.63 F
1387 1520 0.816825 CGGTGGCTGAATGGGATCTG 60.817 60.000 0.0 0.00 0.00 2.90 F
2645 2960 0.958876 GTGGAACCCTTGTTAGCGGG 60.959 60.000 0.0 0.00 46.26 6.13 F
3033 3356 1.630369 ACCCTTGAGTCAAGCATGCTA 59.370 47.619 23.0 2.60 39.85 3.49 F
3276 3599 3.254060 CTGACCTCCAATTGTGAGTACG 58.746 50.000 17.4 8.91 0.00 3.67 F
4490 4815 1.133915 TCCAAAGAACCACCTGTCACC 60.134 52.381 0.0 0.00 0.00 4.02 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2627 2942 1.377229 CCCGCTAACAAGGGTTCCA 59.623 57.895 0.00 0.0 42.67 3.53 R
2645 2960 1.480954 TGAACGCTCCCAGAACTATCC 59.519 52.381 0.00 0.0 0.00 2.59 R
3120 3443 0.390472 CTCTTCGGCCACCTTCTCAC 60.390 60.000 2.24 0.0 0.00 3.51 R
3895 4218 0.040204 ACAAAAGGGGGCCAGATCAG 59.960 55.000 4.39 0.0 0.00 2.90 R
4163 4486 1.039856 GGCCCAAAAAGACAGAAGCA 58.960 50.000 0.00 0.0 0.00 3.91 R
4687 5052 1.312815 GGTCTGCCAAGTCATATGCC 58.687 55.000 0.00 0.0 34.09 4.40 R
6280 6695 0.032815 CCGGCCCAAACGAACAAAAT 59.967 50.000 0.00 0.0 0.00 1.82 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 27 3.558931 ATGGAACCGATGCAATCACTA 57.441 42.857 0.00 0.00 45.97 2.74
90 91 1.134007 AGCATGCTAGCATACTGCCAA 60.134 47.619 29.22 3.32 46.52 4.52
138 140 7.227873 TGGTGAGGTGATCAAAATTAACACTA 58.772 34.615 0.00 0.00 40.43 2.74
210 213 1.747355 GGTCATCCTCGTCGTTCCTAA 59.253 52.381 0.00 0.00 0.00 2.69
326 329 2.181525 GCGCGGGTGCAAATTGAT 59.818 55.556 8.83 0.00 42.97 2.57
513 540 0.036010 AGTGCTGGATGGACTTTCCG 60.036 55.000 0.00 0.00 45.26 4.30
542 569 2.787473 CTGGTAACCAGCCTCATGAA 57.213 50.000 0.00 0.00 45.13 2.57
543 570 2.359900 CTGGTAACCAGCCTCATGAAC 58.640 52.381 0.00 0.00 45.13 3.18
591 618 5.104693 TGAATAAAGCTCTTCATTACCCCGA 60.105 40.000 0.00 0.00 0.00 5.14
634 661 2.414994 TCAACAACCCGGTTTGTACA 57.585 45.000 18.50 4.69 38.82 2.90
638 665 1.209990 ACAACCCGGTTTGTACACTCA 59.790 47.619 16.64 0.00 37.96 3.41
694 721 4.735132 CCACCACGCCGTCGACAT 62.735 66.667 17.16 0.00 39.41 3.06
695 722 3.179265 CACCACGCCGTCGACATC 61.179 66.667 17.16 5.16 39.41 3.06
717 744 0.035739 TCAAGCCCACTAAACCCGTC 59.964 55.000 0.00 0.00 0.00 4.79
863 890 0.176449 TGAGCATCATCACACCCTCG 59.824 55.000 0.00 0.00 42.56 4.63
864 891 1.153289 AGCATCATCACACCCTCGC 60.153 57.895 0.00 0.00 0.00 5.03
1256 1283 0.871722 TTCGCCGTGACCTGATTTTG 59.128 50.000 0.00 0.00 0.00 2.44
1387 1520 0.816825 CGGTGGCTGAATGGGATCTG 60.817 60.000 0.00 0.00 0.00 2.90
1502 1635 4.083484 GGATAGGTTTCCAACTTGTTGACG 60.083 45.833 14.30 0.02 35.72 4.35
1527 1660 4.284490 TCTGTAGCAATGACCTGAAGTTCT 59.716 41.667 4.17 0.00 0.00 3.01
1547 1681 2.706834 GGTTTGTGCATACCGCCCC 61.707 63.158 0.00 0.00 41.33 5.80
1548 1682 2.361865 TTTGTGCATACCGCCCCC 60.362 61.111 0.00 0.00 41.33 5.40
1705 1851 7.843490 TGTATATTTATCGCTTTGCTATCCC 57.157 36.000 0.00 0.00 0.00 3.85
1712 1859 4.948341 TCGCTTTGCTATCCCATTAGTA 57.052 40.909 0.00 0.00 0.00 1.82
1714 1861 5.054477 TCGCTTTGCTATCCCATTAGTAAC 58.946 41.667 0.00 0.00 0.00 2.50
1778 1925 7.556996 TCTCTTTTGTAGACTGTCCTAGATACC 59.443 40.741 3.76 0.00 0.00 2.73
1952 2099 4.989168 TCTGATGATGAAGATGATTCTGCG 59.011 41.667 0.00 0.00 28.79 5.18
2021 2168 1.129251 GCATGTGACGATGGTTCTGTG 59.871 52.381 0.00 0.00 0.00 3.66
2114 2261 7.535738 TGTCCTGTATATCTTTCATCTCCCTA 58.464 38.462 0.00 0.00 0.00 3.53
2144 2291 6.434340 GGAAGTGATTTCAACTAGGGTGATTT 59.566 38.462 0.00 0.00 37.54 2.17
2298 2449 3.466836 TCATATGTGATTCTTCCCGTGC 58.533 45.455 1.90 0.00 0.00 5.34
2317 2631 6.073765 CCCGTGCATATAATTAGACTGTTGAC 60.074 42.308 0.00 0.00 0.00 3.18
2627 2942 3.417069 TTGCTGTTGCTATGTAGGTGT 57.583 42.857 0.00 0.00 40.48 4.16
2645 2960 0.958876 GTGGAACCCTTGTTAGCGGG 60.959 60.000 0.00 0.00 46.26 6.13
2866 3181 5.470098 TCTCTCTATGTGTGTTTTTGCCTTC 59.530 40.000 0.00 0.00 0.00 3.46
2962 3277 9.180678 GTGCAGTAAATACACCATATAAATTGC 57.819 33.333 0.00 0.00 0.00 3.56
3033 3356 1.630369 ACCCTTGAGTCAAGCATGCTA 59.370 47.619 23.00 2.60 39.85 3.49
3240 3563 6.482973 CCAATATGCAAAGAAGGTTTGTGTTT 59.517 34.615 0.00 0.00 0.00 2.83
3271 3594 3.392947 TGTAACCTGACCTCCAATTGTGA 59.607 43.478 4.43 0.76 0.00 3.58
3276 3599 3.254060 CTGACCTCCAATTGTGAGTACG 58.746 50.000 17.40 8.91 0.00 3.67
3289 3612 5.576447 TGTGAGTACGCTGATTTATCTGA 57.424 39.130 0.00 0.00 0.00 3.27
3337 3660 3.720002 ACCAGAGGAAAAGGTGGTAAAGA 59.280 43.478 0.00 0.00 41.65 2.52
3645 3968 4.683501 TGCTACGATACGACAAGTTGTA 57.316 40.909 8.88 2.96 34.25 2.41
4160 4483 6.045072 TCTGAAGGTACAAATTGATACGGT 57.955 37.500 0.00 0.00 0.00 4.83
4163 4486 6.469410 TGAAGGTACAAATTGATACGGTTCT 58.531 36.000 0.00 0.00 0.00 3.01
4164 4487 6.370442 TGAAGGTACAAATTGATACGGTTCTG 59.630 38.462 0.00 0.00 0.00 3.02
4195 4518 8.058847 TGTCTTTTTGGGCCTTATTACTCATAT 58.941 33.333 4.53 0.00 0.00 1.78
4202 4525 5.416013 GGGCCTTATTACTCATATCTTTGCC 59.584 44.000 0.84 0.00 0.00 4.52
4311 4634 6.356556 TGTAGGGTGAAATACATCTTGATGG 58.643 40.000 14.18 0.00 0.00 3.51
4314 4637 6.969043 AGGGTGAAATACATCTTGATGGTTA 58.031 36.000 14.18 0.53 0.00 2.85
4412 4737 1.327460 CAGGTTGTGGATATTGCGTCG 59.673 52.381 0.00 0.00 0.00 5.12
4490 4815 1.133915 TCCAAAGAACCACCTGTCACC 60.134 52.381 0.00 0.00 0.00 4.02
4612 4942 3.061831 CAGTCGATTGTGTGCTCTGAATC 59.938 47.826 0.00 0.00 0.00 2.52
4687 5052 6.258230 TGTAATCTGATTTGCAGTCCTTTG 57.742 37.500 8.38 0.00 45.14 2.77
4760 5125 7.201821 GCATGCTTTTGTACCATATCTAAACCT 60.202 37.037 11.37 0.00 0.00 3.50
4761 5126 8.686334 CATGCTTTTGTACCATATCTAAACCTT 58.314 33.333 0.00 0.00 0.00 3.50
4762 5127 8.644374 TGCTTTTGTACCATATCTAAACCTTT 57.356 30.769 0.00 0.00 0.00 3.11
4823 5191 0.180406 ATGGTGGCTCGGTTACATCC 59.820 55.000 0.00 0.00 0.00 3.51
4949 5317 4.026062 CGTCATACACATGAATTACCCACG 60.026 45.833 0.00 0.00 42.79 4.94
5069 5437 8.932791 TCTAATGCTTAGTGTTTTGCTAGTTAC 58.067 33.333 0.00 0.00 34.81 2.50
5074 5442 6.202188 GCTTAGTGTTTTGCTAGTTACTGTCA 59.798 38.462 0.00 0.00 0.00 3.58
5099 5467 0.746063 TGCTGACCTGTTTTTGGCTG 59.254 50.000 0.00 0.00 0.00 4.85
5202 5570 7.451501 TCATGAAGTGCTGATTTGTTTGATA 57.548 32.000 0.00 0.00 0.00 2.15
5252 5620 7.944729 ATGGAAATTAATAGTGTCTGCTGTT 57.055 32.000 0.00 0.00 0.00 3.16
5366 5734 4.255833 TGATTTTGGATTGCCAGTTGTC 57.744 40.909 0.00 0.00 46.91 3.18
5435 5803 2.097791 TGCGAAAACAAAGGTTAAGCGT 59.902 40.909 0.00 0.00 35.82 5.07
5473 5841 7.915397 CGAAGATTTGAAACAAGAGAAAAGGAA 59.085 33.333 0.00 0.00 0.00 3.36
5549 5917 4.641396 TGGACAGTTCAATTCTGGTAGTG 58.359 43.478 0.00 0.00 37.25 2.74
5570 5938 3.294214 GGAGAAGCAATGGATGGATGTT 58.706 45.455 0.00 0.00 0.00 2.71
5638 6006 4.428570 TGATCCATCCATCCATAGTAGCA 58.571 43.478 0.00 0.00 0.00 3.49
5752 6120 2.234908 GACACTCCCAAGATGTAGCAGT 59.765 50.000 0.00 0.00 0.00 4.40
5869 6237 8.774586 TCTTTTTCTTCACTGAAGTATGTTAGC 58.225 33.333 16.75 0.00 40.24 3.09
5900 6268 1.806542 CAGCGCCAGTTTTGTCATACT 59.193 47.619 2.29 0.00 0.00 2.12
5974 6343 7.817478 TGTTATGTCAACATATCTCGTTTGTCT 59.183 33.333 3.80 0.00 38.49 3.41
6016 6385 3.612860 ACGTGAGCAAACGATAGAACATC 59.387 43.478 16.80 0.00 46.49 3.06
6021 6390 3.941483 AGCAAACGATAGAACATCAAGGG 59.059 43.478 0.00 0.00 41.38 3.95
6045 6414 6.894828 GTGAAACCTGTACAATACAATCGTT 58.105 36.000 0.00 0.00 38.38 3.85
6048 6417 4.901868 ACCTGTACAATACAATCGTTGGT 58.098 39.130 0.00 0.00 38.38 3.67
6055 6424 4.215399 ACAATACAATCGTTGGTGGACAAG 59.785 41.667 3.42 0.00 40.38 3.16
6097 6503 5.446875 GCAGCCGACTGTACCTAAAAATTAC 60.447 44.000 0.00 0.00 46.30 1.89
6100 6506 5.064325 GCCGACTGTACCTAAAAATTACCAG 59.936 44.000 0.00 0.00 0.00 4.00
6101 6507 6.168389 CCGACTGTACCTAAAAATTACCAGT 58.832 40.000 0.00 0.00 0.00 4.00
6103 6509 7.360607 CCGACTGTACCTAAAAATTACCAGTTG 60.361 40.741 0.00 0.00 0.00 3.16
6104 6510 7.360607 CGACTGTACCTAAAAATTACCAGTTGG 60.361 40.741 0.00 0.00 42.17 3.77
6106 6512 6.850234 TGTACCTAAAAATTACCAGTTGGGA 58.150 36.000 2.79 0.00 41.15 4.37
6127 6533 6.039270 TGGGATTTTTGTTGACGATCATATCC 59.961 38.462 0.00 0.00 0.00 2.59
6129 6535 7.355778 GGATTTTTGTTGACGATCATATCCTC 58.644 38.462 0.00 0.00 0.00 3.71
6193 6608 1.600957 GTCATCCATGGTGATTGAGCG 59.399 52.381 12.58 0.00 0.00 5.03
6201 6616 1.429148 GGTGATTGAGCGGCGTAAGG 61.429 60.000 9.37 0.00 38.28 2.69
6209 6624 1.226295 GCGGCGTAAGGAAATGTGC 60.226 57.895 9.37 0.00 38.28 4.57
6210 6625 1.917782 GCGGCGTAAGGAAATGTGCA 61.918 55.000 9.37 0.00 38.28 4.57
6220 6635 7.306167 GCGTAAGGAAATGTGCAATGAAATATG 60.306 37.037 0.00 0.00 38.28 1.78
6221 6636 7.167968 CGTAAGGAAATGTGCAATGAAATATGG 59.832 37.037 0.00 0.00 0.00 2.74
6222 6637 6.549433 AGGAAATGTGCAATGAAATATGGT 57.451 33.333 0.00 0.00 0.00 3.55
6223 6638 6.342906 AGGAAATGTGCAATGAAATATGGTG 58.657 36.000 0.00 0.00 0.00 4.17
6224 6639 6.070653 AGGAAATGTGCAATGAAATATGGTGT 60.071 34.615 0.00 0.00 0.00 4.16
6225 6640 6.594937 GGAAATGTGCAATGAAATATGGTGTT 59.405 34.615 0.00 0.00 0.00 3.32
6226 6641 6.971527 AATGTGCAATGAAATATGGTGTTG 57.028 33.333 0.00 0.00 0.00 3.33
6227 6642 4.818642 TGTGCAATGAAATATGGTGTTGG 58.181 39.130 0.00 0.00 0.00 3.77
6228 6643 4.525874 TGTGCAATGAAATATGGTGTTGGA 59.474 37.500 0.00 0.00 0.00 3.53
6229 6644 5.187381 TGTGCAATGAAATATGGTGTTGGAT 59.813 36.000 0.00 0.00 0.00 3.41
6230 6645 6.108015 GTGCAATGAAATATGGTGTTGGATT 58.892 36.000 0.00 0.00 0.00 3.01
6231 6646 6.036300 GTGCAATGAAATATGGTGTTGGATTG 59.964 38.462 0.00 0.00 0.00 2.67
6232 6647 6.070938 TGCAATGAAATATGGTGTTGGATTGA 60.071 34.615 0.00 0.00 0.00 2.57
6233 6648 6.817641 GCAATGAAATATGGTGTTGGATTGAA 59.182 34.615 0.00 0.00 0.00 2.69
6234 6649 7.496591 GCAATGAAATATGGTGTTGGATTGAAT 59.503 33.333 0.00 0.00 0.00 2.57
6235 6650 8.822855 CAATGAAATATGGTGTTGGATTGAATG 58.177 33.333 0.00 0.00 0.00 2.67
6236 6651 7.715266 TGAAATATGGTGTTGGATTGAATGA 57.285 32.000 0.00 0.00 0.00 2.57
6237 6652 7.546358 TGAAATATGGTGTTGGATTGAATGAC 58.454 34.615 0.00 0.00 0.00 3.06
6238 6653 5.756195 ATATGGTGTTGGATTGAATGACG 57.244 39.130 0.00 0.00 0.00 4.35
6239 6654 2.857483 TGGTGTTGGATTGAATGACGT 58.143 42.857 0.00 0.00 0.00 4.34
6240 6655 4.009370 TGGTGTTGGATTGAATGACGTA 57.991 40.909 0.00 0.00 0.00 3.57
6241 6656 4.390264 TGGTGTTGGATTGAATGACGTAA 58.610 39.130 0.00 0.00 0.00 3.18
6243 6658 4.142687 GGTGTTGGATTGAATGACGTAAGG 60.143 45.833 0.00 0.00 46.39 2.69
6254 6669 3.940723 ACGTAAGGCTAGCACGATC 57.059 52.632 26.85 6.46 46.39 3.69
6255 6670 1.100510 ACGTAAGGCTAGCACGATCA 58.899 50.000 26.85 0.48 46.39 2.92
6256 6671 1.202268 ACGTAAGGCTAGCACGATCAC 60.202 52.381 26.85 10.87 46.39 3.06
6257 6672 1.202256 CGTAAGGCTAGCACGATCACA 60.202 52.381 18.33 0.00 37.89 3.58
6258 6673 2.734175 CGTAAGGCTAGCACGATCACAA 60.734 50.000 18.33 0.00 37.89 3.33
6259 6674 2.472695 AAGGCTAGCACGATCACAAA 57.527 45.000 18.24 0.00 0.00 2.83
6260 6675 1.726853 AGGCTAGCACGATCACAAAC 58.273 50.000 18.24 0.00 0.00 2.93
6261 6676 0.370273 GGCTAGCACGATCACAAACG 59.630 55.000 18.24 0.00 0.00 3.60
6262 6677 0.370273 GCTAGCACGATCACAAACGG 59.630 55.000 10.63 0.00 0.00 4.44
6263 6678 1.990799 CTAGCACGATCACAAACGGA 58.009 50.000 0.00 0.00 0.00 4.69
6264 6679 1.654105 CTAGCACGATCACAAACGGAC 59.346 52.381 0.00 0.00 0.00 4.79
6265 6680 0.249699 AGCACGATCACAAACGGACA 60.250 50.000 0.00 0.00 0.00 4.02
6266 6681 0.796312 GCACGATCACAAACGGACAT 59.204 50.000 0.00 0.00 0.00 3.06
6267 6682 1.196808 GCACGATCACAAACGGACATT 59.803 47.619 0.00 0.00 0.00 2.71
6268 6683 2.350388 GCACGATCACAAACGGACATTT 60.350 45.455 0.00 0.00 0.00 2.32
6269 6684 3.225548 CACGATCACAAACGGACATTTG 58.774 45.455 0.00 0.00 43.81 2.32
6282 6697 3.559238 GACATTTGTCCTGTTCGCATT 57.441 42.857 0.00 0.00 39.07 3.56
6283 6698 3.900941 GACATTTGTCCTGTTCGCATTT 58.099 40.909 0.00 0.00 39.07 2.32
6284 6699 4.298332 GACATTTGTCCTGTTCGCATTTT 58.702 39.130 0.00 0.00 39.07 1.82
6285 6700 4.050553 ACATTTGTCCTGTTCGCATTTTG 58.949 39.130 0.00 0.00 0.00 2.44
6286 6701 3.791973 TTTGTCCTGTTCGCATTTTGT 57.208 38.095 0.00 0.00 0.00 2.83
6287 6702 3.791973 TTGTCCTGTTCGCATTTTGTT 57.208 38.095 0.00 0.00 0.00 2.83
6288 6703 3.347958 TGTCCTGTTCGCATTTTGTTC 57.652 42.857 0.00 0.00 0.00 3.18
6289 6704 2.286713 TGTCCTGTTCGCATTTTGTTCG 60.287 45.455 0.00 0.00 0.00 3.95
6290 6705 1.944024 TCCTGTTCGCATTTTGTTCGT 59.056 42.857 0.00 0.00 0.00 3.85
6291 6706 2.356382 TCCTGTTCGCATTTTGTTCGTT 59.644 40.909 0.00 0.00 0.00 3.85
6292 6707 3.112580 CCTGTTCGCATTTTGTTCGTTT 58.887 40.909 0.00 0.00 0.00 3.60
6293 6708 3.061271 CCTGTTCGCATTTTGTTCGTTTG 60.061 43.478 0.00 0.00 0.00 2.93
6294 6709 2.854777 TGTTCGCATTTTGTTCGTTTGG 59.145 40.909 0.00 0.00 0.00 3.28
6295 6710 2.126914 TCGCATTTTGTTCGTTTGGG 57.873 45.000 0.00 0.00 0.00 4.12
6296 6711 0.506506 CGCATTTTGTTCGTTTGGGC 59.493 50.000 0.00 0.00 0.00 5.36
6297 6712 0.865111 GCATTTTGTTCGTTTGGGCC 59.135 50.000 0.00 0.00 0.00 5.80
6298 6713 1.135867 CATTTTGTTCGTTTGGGCCG 58.864 50.000 0.00 0.00 0.00 6.13
6299 6714 0.032815 ATTTTGTTCGTTTGGGCCGG 59.967 50.000 0.00 0.00 0.00 6.13
6300 6715 2.017559 TTTTGTTCGTTTGGGCCGGG 62.018 55.000 2.18 0.00 0.00 5.73
6303 6718 4.896829 TTCGTTTGGGCCGGGCAA 62.897 61.111 30.95 17.78 0.00 4.52
6304 6719 4.896829 TCGTTTGGGCCGGGCAAA 62.897 61.111 30.95 23.60 0.00 3.68
6305 6720 3.917760 CGTTTGGGCCGGGCAAAA 61.918 61.111 30.95 28.30 0.00 2.44
6306 6721 2.030412 GTTTGGGCCGGGCAAAAG 59.970 61.111 29.61 0.00 0.00 2.27
6307 6722 3.237741 TTTGGGCCGGGCAAAAGG 61.238 61.111 30.95 0.00 0.00 3.11
6315 6730 4.056125 GGGCAAAAGGGCAGCGTC 62.056 66.667 0.00 0.00 45.66 5.19
6316 6731 4.056125 GGCAAAAGGGCAGCGTCC 62.056 66.667 0.00 0.00 42.77 4.79
6317 6732 3.294493 GCAAAAGGGCAGCGTCCA 61.294 61.111 2.18 0.00 0.00 4.02
6318 6733 2.956987 CAAAAGGGCAGCGTCCAG 59.043 61.111 2.18 0.00 0.00 3.86
6343 6758 3.802948 TTTTACATTTGTGTTGGCCGT 57.197 38.095 0.00 0.00 0.00 5.68
6344 6759 2.783828 TTACATTTGTGTTGGCCGTG 57.216 45.000 0.00 0.00 0.00 4.94
6345 6760 0.312416 TACATTTGTGTTGGCCGTGC 59.688 50.000 0.00 0.00 0.00 5.34
6346 6761 1.363443 CATTTGTGTTGGCCGTGCT 59.637 52.632 0.00 0.00 0.00 4.40
6347 6762 0.664166 CATTTGTGTTGGCCGTGCTC 60.664 55.000 0.00 0.00 0.00 4.26
6348 6763 1.805428 ATTTGTGTTGGCCGTGCTCC 61.805 55.000 0.00 0.00 0.00 4.70
6349 6764 4.947147 TGTGTTGGCCGTGCTCCC 62.947 66.667 0.00 0.00 0.00 4.30
6350 6765 4.947147 GTGTTGGCCGTGCTCCCA 62.947 66.667 0.00 0.00 0.00 4.37
6351 6766 4.196778 TGTTGGCCGTGCTCCCAA 62.197 61.111 0.00 0.00 38.71 4.12
6352 6767 2.676471 GTTGGCCGTGCTCCCAAT 60.676 61.111 0.00 0.00 42.56 3.16
6353 6768 2.676121 TTGGCCGTGCTCCCAATG 60.676 61.111 0.00 0.00 36.25 2.82
6354 6769 4.738998 TGGCCGTGCTCCCAATGG 62.739 66.667 0.00 0.00 0.00 3.16
6355 6770 4.424711 GGCCGTGCTCCCAATGGA 62.425 66.667 0.00 0.00 38.75 3.41
6356 6771 2.124151 GCCGTGCTCCCAATGGAT 60.124 61.111 0.00 0.00 40.80 3.41
6357 6772 2.484062 GCCGTGCTCCCAATGGATG 61.484 63.158 0.00 0.00 40.80 3.51
6358 6773 1.224315 CCGTGCTCCCAATGGATGA 59.776 57.895 0.00 0.00 40.80 2.92
6359 6774 1.097547 CCGTGCTCCCAATGGATGAC 61.098 60.000 0.00 0.00 40.80 3.06
6360 6775 0.107508 CGTGCTCCCAATGGATGACT 60.108 55.000 0.00 0.00 40.80 3.41
6361 6776 1.138859 CGTGCTCCCAATGGATGACTA 59.861 52.381 0.00 0.00 40.80 2.59
6362 6777 2.804572 CGTGCTCCCAATGGATGACTAG 60.805 54.545 0.00 0.00 40.80 2.57
6363 6778 2.435805 GTGCTCCCAATGGATGACTAGA 59.564 50.000 0.00 0.00 40.80 2.43
6364 6779 3.114606 TGCTCCCAATGGATGACTAGAA 58.885 45.455 0.00 0.00 40.80 2.10
6365 6780 3.718434 TGCTCCCAATGGATGACTAGAAT 59.282 43.478 0.00 0.00 40.80 2.40
6366 6781 4.166725 TGCTCCCAATGGATGACTAGAATT 59.833 41.667 0.00 0.00 40.80 2.17
6367 6782 5.136105 GCTCCCAATGGATGACTAGAATTT 58.864 41.667 0.00 0.00 40.80 1.82
6368 6783 5.595952 GCTCCCAATGGATGACTAGAATTTT 59.404 40.000 0.00 0.00 40.80 1.82
6369 6784 6.460676 GCTCCCAATGGATGACTAGAATTTTG 60.461 42.308 0.00 0.00 40.80 2.44
6370 6785 5.893255 TCCCAATGGATGACTAGAATTTTGG 59.107 40.000 0.00 5.44 35.03 3.28
6371 6786 5.452356 CCCAATGGATGACTAGAATTTTGGC 60.452 44.000 0.00 0.00 31.82 4.52
6372 6787 5.127519 CCAATGGATGACTAGAATTTTGGCA 59.872 40.000 0.00 0.00 0.00 4.92
6373 6788 5.841957 ATGGATGACTAGAATTTTGGCAC 57.158 39.130 0.00 0.00 0.00 5.01
6374 6789 4.016444 TGGATGACTAGAATTTTGGCACC 58.984 43.478 0.00 0.00 0.00 5.01
6375 6790 3.065371 GGATGACTAGAATTTTGGCACCG 59.935 47.826 0.00 0.00 0.00 4.94
6376 6791 3.134574 TGACTAGAATTTTGGCACCGT 57.865 42.857 0.00 0.00 0.00 4.83
6377 6792 2.811431 TGACTAGAATTTTGGCACCGTG 59.189 45.455 0.00 0.00 0.00 4.94
6378 6793 2.159382 ACTAGAATTTTGGCACCGTGG 58.841 47.619 0.00 0.00 0.00 4.94
6379 6794 2.159382 CTAGAATTTTGGCACCGTGGT 58.841 47.619 0.00 0.00 0.00 4.16
6380 6795 1.408969 AGAATTTTGGCACCGTGGTT 58.591 45.000 0.00 0.00 0.00 3.67
6381 6796 2.588620 AGAATTTTGGCACCGTGGTTA 58.411 42.857 0.00 0.00 0.00 2.85
6382 6797 3.161866 AGAATTTTGGCACCGTGGTTAT 58.838 40.909 0.00 0.00 0.00 1.89
6383 6798 4.337145 AGAATTTTGGCACCGTGGTTATA 58.663 39.130 0.00 0.00 0.00 0.98
6384 6799 4.398044 AGAATTTTGGCACCGTGGTTATAG 59.602 41.667 0.00 0.00 0.00 1.31
6385 6800 2.863132 TTTGGCACCGTGGTTATAGT 57.137 45.000 0.00 0.00 0.00 2.12
6386 6801 2.863132 TTGGCACCGTGGTTATAGTT 57.137 45.000 0.00 0.00 0.00 2.24
6387 6802 2.389962 TGGCACCGTGGTTATAGTTC 57.610 50.000 0.00 0.00 0.00 3.01
6388 6803 1.624312 TGGCACCGTGGTTATAGTTCA 59.376 47.619 0.00 0.00 0.00 3.18
6389 6804 2.237643 TGGCACCGTGGTTATAGTTCAT 59.762 45.455 0.00 0.00 0.00 2.57
6390 6805 2.612212 GGCACCGTGGTTATAGTTCATG 59.388 50.000 0.00 0.00 0.00 3.07
6391 6806 2.031683 GCACCGTGGTTATAGTTCATGC 59.968 50.000 0.00 0.00 0.00 4.06
6392 6807 2.612212 CACCGTGGTTATAGTTCATGCC 59.388 50.000 0.00 0.00 0.00 4.40
6393 6808 1.864711 CCGTGGTTATAGTTCATGCCG 59.135 52.381 0.00 0.00 0.00 5.69
6394 6809 2.482316 CCGTGGTTATAGTTCATGCCGA 60.482 50.000 0.00 0.00 0.00 5.54
6395 6810 2.538449 CGTGGTTATAGTTCATGCCGAC 59.462 50.000 0.00 0.00 0.00 4.79
6396 6811 2.870411 GTGGTTATAGTTCATGCCGACC 59.130 50.000 0.00 0.00 0.00 4.79
6397 6812 2.502130 TGGTTATAGTTCATGCCGACCA 59.498 45.455 0.00 0.00 33.84 4.02
6398 6813 3.131396 GGTTATAGTTCATGCCGACCAG 58.869 50.000 0.00 0.00 0.00 4.00
6399 6814 3.181469 GGTTATAGTTCATGCCGACCAGA 60.181 47.826 0.00 0.00 0.00 3.86
6400 6815 4.503296 GGTTATAGTTCATGCCGACCAGAT 60.503 45.833 0.00 0.00 0.00 2.90
6401 6816 2.890808 TAGTTCATGCCGACCAGATC 57.109 50.000 0.00 0.00 0.00 2.75
6409 6824 4.303853 CGACCAGATCGTTAGCGG 57.696 61.111 0.00 0.00 46.25 5.52
6410 6825 1.944676 CGACCAGATCGTTAGCGGC 60.945 63.158 0.00 0.00 46.25 6.53
6411 6826 1.591863 GACCAGATCGTTAGCGGCC 60.592 63.158 0.00 0.00 38.89 6.13
6412 6827 2.658593 CCAGATCGTTAGCGGCCG 60.659 66.667 24.05 24.05 38.89 6.13
6413 6828 2.658593 CAGATCGTTAGCGGCCGG 60.659 66.667 29.38 10.00 38.89 6.13
6414 6829 4.587189 AGATCGTTAGCGGCCGGC 62.587 66.667 29.38 21.18 44.05 6.13
6430 6845 3.190878 GCACACATGCCAGCCTAC 58.809 61.111 0.00 0.00 46.97 3.18
6431 6846 1.675310 GCACACATGCCAGCCTACA 60.675 57.895 0.00 0.00 46.97 2.74
6432 6847 1.243342 GCACACATGCCAGCCTACAA 61.243 55.000 0.00 0.00 46.97 2.41
6433 6848 1.246649 CACACATGCCAGCCTACAAA 58.753 50.000 0.00 0.00 0.00 2.83
6434 6849 1.612950 CACACATGCCAGCCTACAAAA 59.387 47.619 0.00 0.00 0.00 2.44
6435 6850 2.231964 CACACATGCCAGCCTACAAAAT 59.768 45.455 0.00 0.00 0.00 1.82
6436 6851 2.231964 ACACATGCCAGCCTACAAAATG 59.768 45.455 0.00 0.00 0.00 2.32
6437 6852 2.492881 CACATGCCAGCCTACAAAATGA 59.507 45.455 0.00 0.00 0.00 2.57
6438 6853 3.131577 CACATGCCAGCCTACAAAATGAT 59.868 43.478 0.00 0.00 0.00 2.45
6439 6854 3.382546 ACATGCCAGCCTACAAAATGATC 59.617 43.478 0.00 0.00 0.00 2.92
6440 6855 3.084536 TGCCAGCCTACAAAATGATCA 57.915 42.857 0.00 0.00 0.00 2.92
6441 6856 3.429492 TGCCAGCCTACAAAATGATCAA 58.571 40.909 0.00 0.00 0.00 2.57
6442 6857 3.193267 TGCCAGCCTACAAAATGATCAAC 59.807 43.478 0.00 0.00 0.00 3.18
6443 6858 3.429410 GCCAGCCTACAAAATGATCAACC 60.429 47.826 0.00 0.00 0.00 3.77
6444 6859 3.131046 CCAGCCTACAAAATGATCAACCC 59.869 47.826 0.00 0.00 0.00 4.11
6445 6860 3.131046 CAGCCTACAAAATGATCAACCCC 59.869 47.826 0.00 0.00 0.00 4.95
6446 6861 2.430694 GCCTACAAAATGATCAACCCCC 59.569 50.000 0.00 0.00 0.00 5.40
6447 6862 3.707316 CCTACAAAATGATCAACCCCCA 58.293 45.455 0.00 0.00 0.00 4.96
6448 6863 4.093011 CCTACAAAATGATCAACCCCCAA 58.907 43.478 0.00 0.00 0.00 4.12
6449 6864 4.160252 CCTACAAAATGATCAACCCCCAAG 59.840 45.833 0.00 0.00 0.00 3.61
6450 6865 3.586429 ACAAAATGATCAACCCCCAAGT 58.414 40.909 0.00 0.00 0.00 3.16
6451 6866 3.973305 ACAAAATGATCAACCCCCAAGTT 59.027 39.130 0.00 0.00 0.00 2.66
6452 6867 4.411869 ACAAAATGATCAACCCCCAAGTTT 59.588 37.500 0.00 0.00 0.00 2.66
6453 6868 5.104151 ACAAAATGATCAACCCCCAAGTTTT 60.104 36.000 0.00 0.00 0.00 2.43
6454 6869 5.645056 AAATGATCAACCCCCAAGTTTTT 57.355 34.783 0.00 0.00 0.00 1.94
6455 6870 6.755542 AAATGATCAACCCCCAAGTTTTTA 57.244 33.333 0.00 0.00 0.00 1.52
6456 6871 6.358974 AATGATCAACCCCCAAGTTTTTAG 57.641 37.500 0.00 0.00 0.00 1.85
6457 6872 4.156477 TGATCAACCCCCAAGTTTTTAGG 58.844 43.478 0.00 0.00 0.00 2.69
6458 6873 2.321719 TCAACCCCCAAGTTTTTAGGC 58.678 47.619 0.00 0.00 0.00 3.93
6459 6874 1.346395 CAACCCCCAAGTTTTTAGGCC 59.654 52.381 0.00 0.00 0.00 5.19
6460 6875 0.541063 ACCCCCAAGTTTTTAGGCCG 60.541 55.000 0.00 0.00 0.00 6.13
6461 6876 0.251430 CCCCCAAGTTTTTAGGCCGA 60.251 55.000 0.00 0.00 0.00 5.54
6462 6877 1.618616 CCCCCAAGTTTTTAGGCCGAT 60.619 52.381 0.00 0.00 0.00 4.18
6463 6878 2.357361 CCCCCAAGTTTTTAGGCCGATA 60.357 50.000 0.00 0.00 0.00 2.92
6464 6879 3.358118 CCCCAAGTTTTTAGGCCGATAA 58.642 45.455 0.00 0.00 0.00 1.75
6465 6880 3.129813 CCCCAAGTTTTTAGGCCGATAAC 59.870 47.826 0.00 2.21 0.00 1.89
6466 6881 3.759618 CCCAAGTTTTTAGGCCGATAACA 59.240 43.478 14.39 0.00 0.00 2.41
6467 6882 4.218852 CCCAAGTTTTTAGGCCGATAACAA 59.781 41.667 14.39 0.31 0.00 2.83
6468 6883 5.279056 CCCAAGTTTTTAGGCCGATAACAAA 60.279 40.000 14.39 0.00 0.00 2.83
6469 6884 5.861787 CCAAGTTTTTAGGCCGATAACAAAG 59.138 40.000 14.39 6.58 0.00 2.77
6470 6885 5.055642 AGTTTTTAGGCCGATAACAAAGC 57.944 39.130 14.39 3.37 0.00 3.51
6471 6886 3.750639 TTTTAGGCCGATAACAAAGCG 57.249 42.857 0.00 0.00 36.54 4.68
6472 6887 2.676632 TTAGGCCGATAACAAAGCGA 57.323 45.000 0.00 0.00 40.11 4.93
6473 6888 2.218953 TAGGCCGATAACAAAGCGAG 57.781 50.000 0.00 0.00 40.11 5.03
6474 6889 1.090052 AGGCCGATAACAAAGCGAGC 61.090 55.000 0.00 0.00 40.11 5.03
6475 6890 1.012234 GCCGATAACAAAGCGAGCG 60.012 57.895 0.00 0.00 40.11 5.03
6476 6891 1.636340 CCGATAACAAAGCGAGCGG 59.364 57.895 0.00 0.00 40.11 5.52
6477 6892 1.012234 CGATAACAAAGCGAGCGGC 60.012 57.895 0.00 0.00 40.11 6.53
6486 6901 3.870606 GCGAGCGGCTAGTTTTCA 58.129 55.556 11.73 0.00 39.11 2.69
6487 6902 1.420312 GCGAGCGGCTAGTTTTCAC 59.580 57.895 11.73 0.00 39.11 3.18
6488 6903 1.702299 CGAGCGGCTAGTTTTCACG 59.298 57.895 0.60 0.00 0.00 4.35
6490 6905 3.562635 GCGGCTAGTTTTCACGCT 58.437 55.556 0.00 0.00 46.02 5.07
6491 6906 1.132640 GCGGCTAGTTTTCACGCTG 59.867 57.895 0.00 0.00 46.02 5.18
6492 6907 1.787847 CGGCTAGTTTTCACGCTGG 59.212 57.895 0.00 0.00 0.00 4.85
6493 6908 1.502190 GGCTAGTTTTCACGCTGGC 59.498 57.895 0.00 0.00 38.29 4.85
6494 6909 1.234615 GGCTAGTTTTCACGCTGGCA 61.235 55.000 0.00 0.00 40.33 4.92
6495 6910 0.591170 GCTAGTTTTCACGCTGGCAA 59.409 50.000 0.00 0.00 38.76 4.52
6496 6911 1.200020 GCTAGTTTTCACGCTGGCAAT 59.800 47.619 0.00 0.00 38.76 3.56
6497 6912 2.855180 CTAGTTTTCACGCTGGCAATG 58.145 47.619 0.00 0.00 0.00 2.82
6498 6913 1.317613 AGTTTTCACGCTGGCAATGA 58.682 45.000 0.00 0.00 0.00 2.57
6499 6914 1.680735 AGTTTTCACGCTGGCAATGAA 59.319 42.857 4.81 4.81 0.00 2.57
6500 6915 2.053627 GTTTTCACGCTGGCAATGAAG 58.946 47.619 8.09 0.00 34.04 3.02
6501 6916 0.039256 TTTCACGCTGGCAATGAAGC 60.039 50.000 8.09 0.00 34.04 3.86
6509 6924 4.868195 GCAATGAAGCCAACGGTC 57.132 55.556 0.00 0.00 0.00 4.79
6510 6925 1.154225 GCAATGAAGCCAACGGTCG 60.154 57.895 0.00 0.00 0.00 4.79
6511 6926 1.501741 CAATGAAGCCAACGGTCGG 59.498 57.895 0.00 0.00 0.00 4.79
6518 6933 2.590575 CCAACGGTCGGCACACTT 60.591 61.111 0.00 0.00 0.00 3.16
6519 6934 2.631428 CAACGGTCGGCACACTTG 59.369 61.111 0.00 0.00 0.00 3.16
6528 6943 2.647297 GCACACTTGCCAGCCTTC 59.353 61.111 0.00 0.00 43.66 3.46
6529 6944 2.924105 GCACACTTGCCAGCCTTCC 61.924 63.158 0.00 0.00 43.66 3.46
6530 6945 1.529010 CACACTTGCCAGCCTTCCA 60.529 57.895 0.00 0.00 0.00 3.53
6531 6946 1.108727 CACACTTGCCAGCCTTCCAA 61.109 55.000 0.00 0.00 0.00 3.53
6532 6947 0.396974 ACACTTGCCAGCCTTCCAAA 60.397 50.000 0.00 0.00 0.00 3.28
6533 6948 0.752054 CACTTGCCAGCCTTCCAAAA 59.248 50.000 0.00 0.00 0.00 2.44
6534 6949 1.138661 CACTTGCCAGCCTTCCAAAAA 59.861 47.619 0.00 0.00 0.00 1.94
6535 6950 1.413812 ACTTGCCAGCCTTCCAAAAAG 59.586 47.619 0.00 0.00 0.00 2.27
6536 6951 0.758123 TTGCCAGCCTTCCAAAAAGG 59.242 50.000 0.00 0.00 40.39 3.11
6545 6960 4.456280 CCTTCCAAAAAGGCCATAGTTC 57.544 45.455 5.01 0.00 37.29 3.01
6546 6961 3.831911 CCTTCCAAAAAGGCCATAGTTCA 59.168 43.478 5.01 0.00 37.29 3.18
6547 6962 4.467438 CCTTCCAAAAAGGCCATAGTTCAT 59.533 41.667 5.01 0.00 37.29 2.57
6548 6963 5.404466 TTCCAAAAAGGCCATAGTTCATG 57.596 39.130 5.01 0.00 37.29 3.07
6549 6964 4.415596 TCCAAAAAGGCCATAGTTCATGT 58.584 39.130 5.01 0.00 37.29 3.21
6550 6965 4.462483 TCCAAAAAGGCCATAGTTCATGTC 59.538 41.667 5.01 0.00 37.29 3.06
6551 6966 4.463891 CCAAAAAGGCCATAGTTCATGTCT 59.536 41.667 5.01 0.00 32.21 3.41
6552 6967 5.393461 CCAAAAAGGCCATAGTTCATGTCTC 60.393 44.000 5.01 0.00 32.21 3.36
6553 6968 2.898729 AGGCCATAGTTCATGTCTCG 57.101 50.000 5.01 0.00 32.21 4.04
6554 6969 1.202580 AGGCCATAGTTCATGTCTCGC 60.203 52.381 5.01 0.00 32.21 5.03
6555 6970 1.473257 GGCCATAGTTCATGTCTCGCA 60.473 52.381 0.00 0.00 32.21 5.10
6556 6971 1.863454 GCCATAGTTCATGTCTCGCAG 59.137 52.381 0.00 0.00 32.21 5.18
6557 6972 1.863454 CCATAGTTCATGTCTCGCAGC 59.137 52.381 0.00 0.00 32.21 5.25
6558 6973 1.863454 CATAGTTCATGTCTCGCAGCC 59.137 52.381 0.00 0.00 0.00 4.85
6559 6974 1.186200 TAGTTCATGTCTCGCAGCCT 58.814 50.000 0.00 0.00 0.00 4.58
6560 6975 0.322975 AGTTCATGTCTCGCAGCCTT 59.677 50.000 0.00 0.00 0.00 4.35
6561 6976 0.723981 GTTCATGTCTCGCAGCCTTC 59.276 55.000 0.00 0.00 0.00 3.46
6562 6977 0.391661 TTCATGTCTCGCAGCCTTCC 60.392 55.000 0.00 0.00 0.00 3.46
6563 6978 1.220206 CATGTCTCGCAGCCTTCCT 59.780 57.895 0.00 0.00 0.00 3.36
6564 6979 0.461548 CATGTCTCGCAGCCTTCCTA 59.538 55.000 0.00 0.00 0.00 2.94
6565 6980 0.749649 ATGTCTCGCAGCCTTCCTAG 59.250 55.000 0.00 0.00 0.00 3.02
6566 6981 1.323271 TGTCTCGCAGCCTTCCTAGG 61.323 60.000 0.82 0.82 45.02 3.02
6567 6982 1.000486 TCTCGCAGCCTTCCTAGGT 60.000 57.895 9.08 0.00 44.00 3.08
6568 6983 1.038130 TCTCGCAGCCTTCCTAGGTC 61.038 60.000 9.08 0.00 44.00 3.85
6569 6984 1.304962 TCGCAGCCTTCCTAGGTCA 60.305 57.895 9.08 0.00 44.00 4.02
6570 6985 0.687757 TCGCAGCCTTCCTAGGTCAT 60.688 55.000 9.08 0.00 44.00 3.06
6571 6986 0.531532 CGCAGCCTTCCTAGGTCATG 60.532 60.000 9.08 3.51 44.00 3.07
6572 6987 0.817229 GCAGCCTTCCTAGGTCATGC 60.817 60.000 9.08 9.67 44.00 4.06
6573 6988 0.179034 CAGCCTTCCTAGGTCATGCC 60.179 60.000 9.08 0.00 44.00 4.40
6574 6989 1.227674 GCCTTCCTAGGTCATGCCG 60.228 63.158 9.08 0.00 44.00 5.69
6575 6990 1.972660 GCCTTCCTAGGTCATGCCGT 61.973 60.000 9.08 0.00 44.00 5.68
6576 6991 0.105039 CCTTCCTAGGTCATGCCGTC 59.895 60.000 9.08 0.00 43.70 4.79
6577 6992 1.115467 CTTCCTAGGTCATGCCGTCT 58.885 55.000 9.08 0.00 43.70 4.18
6578 6993 1.482593 CTTCCTAGGTCATGCCGTCTT 59.517 52.381 9.08 0.00 43.70 3.01
6579 6994 0.824109 TCCTAGGTCATGCCGTCTTG 59.176 55.000 9.08 0.00 43.70 3.02
6580 6995 0.179073 CCTAGGTCATGCCGTCTTGG 60.179 60.000 0.00 0.00 43.70 3.61
6581 6996 0.537188 CTAGGTCATGCCGTCTTGGT 59.463 55.000 0.00 0.00 43.70 3.67
6582 6997 0.535335 TAGGTCATGCCGTCTTGGTC 59.465 55.000 0.00 0.00 43.70 4.02
6583 6998 2.100631 GGTCATGCCGTCTTGGTCG 61.101 63.158 0.00 0.00 41.21 4.79
6584 6999 1.080093 GTCATGCCGTCTTGGTCGA 60.080 57.895 0.00 0.00 41.21 4.20
6585 7000 0.669318 GTCATGCCGTCTTGGTCGAA 60.669 55.000 0.00 0.00 41.21 3.71
6586 7001 0.669318 TCATGCCGTCTTGGTCGAAC 60.669 55.000 0.00 0.00 41.21 3.95
6587 7002 0.948623 CATGCCGTCTTGGTCGAACA 60.949 55.000 0.00 0.00 41.21 3.18
6588 7003 0.036388 ATGCCGTCTTGGTCGAACAT 60.036 50.000 2.76 0.00 41.21 2.71
6589 7004 0.669318 TGCCGTCTTGGTCGAACATC 60.669 55.000 2.76 0.00 41.21 3.06
6590 7005 0.389948 GCCGTCTTGGTCGAACATCT 60.390 55.000 2.76 0.00 41.21 2.90
6591 7006 1.630148 CCGTCTTGGTCGAACATCTC 58.370 55.000 2.76 0.00 0.00 2.75
6592 7007 1.630148 CGTCTTGGTCGAACATCTCC 58.370 55.000 2.76 0.00 0.00 3.71
6593 7008 1.202582 CGTCTTGGTCGAACATCTCCT 59.797 52.381 2.76 0.00 0.00 3.69
6594 7009 2.352814 CGTCTTGGTCGAACATCTCCTT 60.353 50.000 2.76 0.00 0.00 3.36
6595 7010 3.665190 GTCTTGGTCGAACATCTCCTTT 58.335 45.455 2.76 0.00 0.00 3.11
6596 7011 4.065789 GTCTTGGTCGAACATCTCCTTTT 58.934 43.478 2.76 0.00 0.00 2.27
6597 7012 4.065088 TCTTGGTCGAACATCTCCTTTTG 58.935 43.478 2.76 0.00 0.00 2.44
6598 7013 2.151202 TGGTCGAACATCTCCTTTTGC 58.849 47.619 0.00 0.00 0.00 3.68
6599 7014 1.468914 GGTCGAACATCTCCTTTTGCC 59.531 52.381 0.00 0.00 0.00 4.52
6600 7015 2.427506 GTCGAACATCTCCTTTTGCCT 58.572 47.619 0.00 0.00 0.00 4.75
6601 7016 2.814336 GTCGAACATCTCCTTTTGCCTT 59.186 45.455 0.00 0.00 0.00 4.35
6602 7017 3.253432 GTCGAACATCTCCTTTTGCCTTT 59.747 43.478 0.00 0.00 0.00 3.11
6603 7018 3.888930 TCGAACATCTCCTTTTGCCTTTT 59.111 39.130 0.00 0.00 0.00 2.27
6604 7019 4.023193 TCGAACATCTCCTTTTGCCTTTTC 60.023 41.667 0.00 0.00 0.00 2.29
6605 7020 4.022849 CGAACATCTCCTTTTGCCTTTTCT 60.023 41.667 0.00 0.00 0.00 2.52
6606 7021 5.459536 AACATCTCCTTTTGCCTTTTCTC 57.540 39.130 0.00 0.00 0.00 2.87
6607 7022 4.473444 ACATCTCCTTTTGCCTTTTCTCA 58.527 39.130 0.00 0.00 0.00 3.27
6608 7023 4.895297 ACATCTCCTTTTGCCTTTTCTCAA 59.105 37.500 0.00 0.00 0.00 3.02
6609 7024 5.363580 ACATCTCCTTTTGCCTTTTCTCAAA 59.636 36.000 0.00 0.00 0.00 2.69
6610 7025 5.262588 TCTCCTTTTGCCTTTTCTCAAAC 57.737 39.130 0.00 0.00 32.58 2.93
6611 7026 4.099419 TCTCCTTTTGCCTTTTCTCAAACC 59.901 41.667 0.00 0.00 32.58 3.27
6612 7027 3.772025 TCCTTTTGCCTTTTCTCAAACCA 59.228 39.130 0.00 0.00 32.58 3.67
6613 7028 4.223923 TCCTTTTGCCTTTTCTCAAACCAA 59.776 37.500 0.00 0.00 32.58 3.67
6614 7029 4.332543 CCTTTTGCCTTTTCTCAAACCAAC 59.667 41.667 0.00 0.00 32.58 3.77
6615 7030 4.817318 TTTGCCTTTTCTCAAACCAACT 57.183 36.364 0.00 0.00 0.00 3.16
6616 7031 4.817318 TTGCCTTTTCTCAAACCAACTT 57.183 36.364 0.00 0.00 0.00 2.66
6617 7032 4.385358 TGCCTTTTCTCAAACCAACTTC 57.615 40.909 0.00 0.00 0.00 3.01
6618 7033 4.023291 TGCCTTTTCTCAAACCAACTTCT 58.977 39.130 0.00 0.00 0.00 2.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
90 91 4.082523 CGGTCGCCACCCATGACT 62.083 66.667 0.00 0.00 40.01 3.41
138 140 5.374921 CTCCAACATAGAGATTCCAGCATT 58.625 41.667 0.00 0.00 32.86 3.56
273 276 2.203139 CACCACCACGCCTTCACA 60.203 61.111 0.00 0.00 0.00 3.58
369 396 9.936759 GCTAGCTCCTCAATATTTAAGAGTAAT 57.063 33.333 7.70 0.00 0.00 1.89
513 540 2.632544 GGTTACCAGCAAACCCGGC 61.633 63.158 0.00 0.00 40.49 6.13
615 642 2.015587 GTGTACAAACCGGGTTGTTGA 58.984 47.619 40.55 25.01 41.84 3.18
634 661 1.133915 TCGGCTCCAAACCTTTTGAGT 60.134 47.619 0.09 0.00 33.74 3.41
638 665 1.170290 CGGTCGGCTCCAAACCTTTT 61.170 55.000 6.08 0.00 0.00 2.27
694 721 1.628846 GGGTTTAGTGGGCTTGAGAGA 59.371 52.381 0.00 0.00 0.00 3.10
695 722 1.676014 CGGGTTTAGTGGGCTTGAGAG 60.676 57.143 0.00 0.00 0.00 3.20
916 943 1.180029 CGTTCTAGAAGGTTCCGGGA 58.820 55.000 15.51 0.00 0.00 5.14
1110 1137 3.707640 CTCGAGGGAGCCGTCCTCT 62.708 68.421 3.91 0.75 46.43 3.69
1256 1283 3.365265 CTGCGGCCACAGAAACCC 61.365 66.667 16.07 0.00 40.25 4.11
1338 1471 1.599606 GCTGGAAGAGAGCAGACGGA 61.600 60.000 0.00 0.00 36.40 4.69
1387 1520 0.032540 CCTTTTGCTGCAGGTGGAAC 59.967 55.000 17.12 0.00 0.00 3.62
1547 1681 1.529226 TAACCCAATCACACGCTTGG 58.471 50.000 0.00 0.00 41.34 3.61
1548 1682 4.188462 TCTATAACCCAATCACACGCTTG 58.812 43.478 0.00 0.00 0.00 4.01
1687 1833 6.296026 ACTAATGGGATAGCAAAGCGATAAA 58.704 36.000 0.00 0.00 0.00 1.40
1705 1851 7.962918 GCATCCACAAACTTACAGTTACTAATG 59.037 37.037 0.00 0.00 37.47 1.90
1712 1859 5.301551 TGATTGCATCCACAAACTTACAGTT 59.698 36.000 0.00 0.00 40.80 3.16
1714 1861 5.375417 TGATTGCATCCACAAACTTACAG 57.625 39.130 0.00 0.00 32.27 2.74
1778 1925 2.263540 CAGACCGGTACCCCAACG 59.736 66.667 7.34 0.00 0.00 4.10
2021 2168 1.939934 TCAGGCACATTATACAAGCGC 59.060 47.619 0.00 0.00 0.00 5.92
2114 2261 6.782494 ACCCTAGTTGAAATCACTTCCAAAAT 59.218 34.615 0.00 0.00 32.53 1.82
2121 2268 7.839680 AAAATCACCCTAGTTGAAATCACTT 57.160 32.000 0.00 0.00 0.00 3.16
2144 2291 8.026607 GTCCTGCAAGTAAGCACATAAATAAAA 58.973 33.333 0.00 0.00 40.11 1.52
2382 2697 5.411361 TCACAAAAATGAACCCATAGAGACG 59.589 40.000 0.00 0.00 31.59 4.18
2383 2698 6.817765 TCACAAAAATGAACCCATAGAGAC 57.182 37.500 0.00 0.00 31.59 3.36
2627 2942 1.377229 CCCGCTAACAAGGGTTCCA 59.623 57.895 0.00 0.00 42.67 3.53
2645 2960 1.480954 TGAACGCTCCCAGAACTATCC 59.519 52.381 0.00 0.00 0.00 2.59
2809 3124 7.487189 CGTAAGTGTAGTTAATCCACCTAACAG 59.513 40.741 0.00 0.00 32.66 3.16
2866 3181 4.662145 ACAAACAGCTTCTCGAGTTTTTG 58.338 39.130 13.13 10.91 32.34 2.44
3033 3356 4.652822 AGAAAGCGAAGAAAACCAGGTAT 58.347 39.130 0.00 0.00 0.00 2.73
3073 3396 6.314400 TCGATGCCTTGTACAAAATTACCTAC 59.686 38.462 10.03 0.00 0.00 3.18
3120 3443 0.390472 CTCTTCGGCCACCTTCTCAC 60.390 60.000 2.24 0.00 0.00 3.51
3133 3456 2.313234 CACTTGTGCATTTGCTCTTCG 58.687 47.619 3.94 0.00 42.66 3.79
3240 3563 4.513442 GAGGTCAGGTTACAATATGCACA 58.487 43.478 0.00 0.00 0.00 4.57
3271 3594 6.458232 AGAACTCAGATAAATCAGCGTACT 57.542 37.500 0.00 0.00 0.00 2.73
3289 3612 6.939163 ACAGCATCTGACAGAATAAAAGAACT 59.061 34.615 9.70 0.00 35.18 3.01
3337 3660 0.392998 AATTCATCCTTGCGGCGAGT 60.393 50.000 12.98 0.00 0.00 4.18
3600 3923 0.527817 CTCCGGACGATGTACTTGGC 60.528 60.000 0.00 0.00 0.00 4.52
3645 3968 4.388577 AGACCCCTTGCTTTTAAGATGT 57.611 40.909 0.00 0.00 0.00 3.06
3895 4218 0.040204 ACAAAAGGGGGCCAGATCAG 59.960 55.000 4.39 0.00 0.00 2.90
4045 4368 6.676950 TGGACTGTTTTAACTGCATATTGTG 58.323 36.000 0.00 0.00 0.00 3.33
4160 4483 2.362077 GCCCAAAAAGACAGAAGCAGAA 59.638 45.455 0.00 0.00 0.00 3.02
4163 4486 1.039856 GGCCCAAAAAGACAGAAGCA 58.960 50.000 0.00 0.00 0.00 3.91
4164 4487 1.332195 AGGCCCAAAAAGACAGAAGC 58.668 50.000 0.00 0.00 0.00 3.86
4195 4518 3.243501 GCTCAATTCAACACTGGCAAAGA 60.244 43.478 0.00 0.00 0.00 2.52
4202 4525 4.862574 CCATTCATGCTCAATTCAACACTG 59.137 41.667 0.00 0.00 0.00 3.66
4311 4634 4.535526 AAAACATCACCATGGGCTTAAC 57.464 40.909 18.09 0.00 33.82 2.01
4345 4670 9.399403 GTTCAGAAACAAAATAACAGAGGAATC 57.601 33.333 0.00 0.00 35.36 2.52
4490 4815 4.446385 CCATCAGCACTCACAAACATTTTG 59.554 41.667 0.00 0.00 0.00 2.44
4612 4942 6.520272 AGTATCTTACTAGGCATGAAAGCAG 58.480 40.000 0.00 0.00 37.23 4.24
4687 5052 1.312815 GGTCTGCCAAGTCATATGCC 58.687 55.000 0.00 0.00 34.09 4.40
4709 5074 6.700081 CCTTCCAATGCATAATCATGAAACTG 59.300 38.462 0.00 0.00 33.67 3.16
4760 5125 8.506437 CAGTGTTGTCTGCAGATAATAGAAAAA 58.494 33.333 25.99 1.28 0.00 1.94
4761 5126 7.119699 CCAGTGTTGTCTGCAGATAATAGAAAA 59.880 37.037 25.99 2.02 34.47 2.29
4762 5127 6.595326 CCAGTGTTGTCTGCAGATAATAGAAA 59.405 38.462 25.99 9.51 34.47 2.52
4949 5317 2.840651 TCCAGGGAAGTCTTGGAATCTC 59.159 50.000 0.00 0.00 0.00 2.75
5074 5442 4.082026 GCCAAAAACAGGTCAGCAATAGAT 60.082 41.667 0.00 0.00 0.00 1.98
5099 5467 1.470098 CACCAGCAGCATAAGTGAACC 59.530 52.381 0.00 0.00 0.00 3.62
5202 5570 4.038271 TCAGATTTCCTCACAAATGCCT 57.962 40.909 0.00 0.00 0.00 4.75
5274 5642 6.255670 GCGTCATGTTAATCATTGTCAGTCTA 59.744 38.462 0.00 0.00 34.09 2.59
5366 5734 3.156293 TGTTGACAATTGGACATCCTGG 58.844 45.455 10.83 0.00 36.82 4.45
5435 5803 6.772770 TTCAAATCTTCGTCACGATGTTTA 57.227 33.333 12.40 0.00 35.23 2.01
5486 5854 4.021544 AGCACCGGATCTTTAAATGCAAAA 60.022 37.500 9.46 0.00 34.03 2.44
5549 5917 2.941480 ACATCCATCCATTGCTTCTCC 58.059 47.619 0.00 0.00 0.00 3.71
5570 5938 2.227757 TGGGCCGAATCCTTGGACA 61.228 57.895 0.00 0.00 33.70 4.02
5638 6006 1.247567 CGAGGGCCACAAGTTCAAAT 58.752 50.000 6.18 0.00 0.00 2.32
5758 6126 3.925299 CGCCAGATGATAATAGCAGACAG 59.075 47.826 0.00 0.00 0.00 3.51
5900 6268 4.871993 AAAATTTGCGCATTTTGACACA 57.128 31.818 18.27 0.00 35.45 3.72
5974 6343 1.979855 ACACACAGCACAAAGGCATA 58.020 45.000 0.00 0.00 35.83 3.14
5976 6345 1.021202 GTACACACAGCACAAAGGCA 58.979 50.000 0.00 0.00 35.83 4.75
6016 6385 5.067273 TGTATTGTACAGGTTTCACCCTTG 58.933 41.667 0.00 0.00 39.75 3.61
6021 6390 6.476243 ACGATTGTATTGTACAGGTTTCAC 57.524 37.500 0.00 0.00 40.24 3.18
6028 6397 4.932799 TCCACCAACGATTGTATTGTACAG 59.067 41.667 0.00 0.00 40.24 2.74
6029 6398 4.691685 GTCCACCAACGATTGTATTGTACA 59.308 41.667 0.00 0.00 36.79 2.90
6033 6402 4.215399 ACTTGTCCACCAACGATTGTATTG 59.785 41.667 0.00 0.00 0.00 1.90
6045 6414 8.642935 TTCAATGATTTAATACTTGTCCACCA 57.357 30.769 0.00 0.00 0.00 4.17
6048 6417 8.128582 GCGATTCAATGATTTAATACTTGTCCA 58.871 33.333 0.00 0.00 0.00 4.02
6055 6424 5.565259 CGGCTGCGATTCAATGATTTAATAC 59.435 40.000 0.00 0.00 0.00 1.89
6081 6487 6.943718 TCCCAACTGGTAATTTTTAGGTACAG 59.056 38.462 0.00 0.00 34.77 2.74
6084 6490 8.959676 AAATCCCAACTGGTAATTTTTAGGTA 57.040 30.769 0.00 0.00 34.77 3.08
6097 6503 3.067461 TCGTCAACAAAAATCCCAACTGG 59.933 43.478 0.00 0.00 0.00 4.00
6100 6506 4.865776 TGATCGTCAACAAAAATCCCAAC 58.134 39.130 0.00 0.00 0.00 3.77
6101 6507 5.720371 ATGATCGTCAACAAAAATCCCAA 57.280 34.783 0.00 0.00 0.00 4.12
6103 6509 6.263168 AGGATATGATCGTCAACAAAAATCCC 59.737 38.462 5.75 0.00 0.00 3.85
6104 6510 7.264373 AGGATATGATCGTCAACAAAAATCC 57.736 36.000 0.00 0.00 0.00 3.01
6106 6512 7.056635 AGGAGGATATGATCGTCAACAAAAAT 58.943 34.615 10.38 0.00 43.88 1.82
6143 6549 4.336433 ACCAAATTATTGAGATGCGACCTG 59.664 41.667 0.00 0.00 38.94 4.00
6144 6550 4.526970 ACCAAATTATTGAGATGCGACCT 58.473 39.130 0.00 0.00 38.94 3.85
6145 6551 4.900635 ACCAAATTATTGAGATGCGACC 57.099 40.909 0.00 0.00 38.94 4.79
6146 6552 5.237344 AGCTACCAAATTATTGAGATGCGAC 59.763 40.000 0.00 0.00 38.94 5.19
6148 6554 5.679734 AGCTACCAAATTATTGAGATGCG 57.320 39.130 0.00 0.00 38.94 4.73
6149 6555 6.183360 ACCAAGCTACCAAATTATTGAGATGC 60.183 38.462 0.00 0.00 38.94 3.91
6150 6556 7.067372 TGACCAAGCTACCAAATTATTGAGATG 59.933 37.037 0.00 0.00 38.94 2.90
6193 6608 2.163412 TCATTGCACATTTCCTTACGCC 59.837 45.455 0.00 0.00 0.00 5.68
6201 6616 7.413219 CCAACACCATATTTCATTGCACATTTC 60.413 37.037 0.00 0.00 0.00 2.17
6209 6624 8.822855 CATTCAATCCAACACCATATTTCATTG 58.177 33.333 0.00 0.00 0.00 2.82
6210 6625 8.760735 TCATTCAATCCAACACCATATTTCATT 58.239 29.630 0.00 0.00 0.00 2.57
6220 6635 4.142687 CCTTACGTCATTCAATCCAACACC 60.143 45.833 0.00 0.00 0.00 4.16
6221 6636 4.671766 GCCTTACGTCATTCAATCCAACAC 60.672 45.833 0.00 0.00 0.00 3.32
6222 6637 3.438781 GCCTTACGTCATTCAATCCAACA 59.561 43.478 0.00 0.00 0.00 3.33
6223 6638 3.689649 AGCCTTACGTCATTCAATCCAAC 59.310 43.478 0.00 0.00 0.00 3.77
6224 6639 3.950397 AGCCTTACGTCATTCAATCCAA 58.050 40.909 0.00 0.00 0.00 3.53
6225 6640 3.627395 AGCCTTACGTCATTCAATCCA 57.373 42.857 0.00 0.00 0.00 3.41
6226 6641 3.495001 GCTAGCCTTACGTCATTCAATCC 59.505 47.826 2.29 0.00 0.00 3.01
6227 6642 4.025647 GTGCTAGCCTTACGTCATTCAATC 60.026 45.833 13.29 0.00 0.00 2.67
6228 6643 3.871594 GTGCTAGCCTTACGTCATTCAAT 59.128 43.478 13.29 0.00 0.00 2.57
6229 6644 3.259064 GTGCTAGCCTTACGTCATTCAA 58.741 45.455 13.29 0.00 0.00 2.69
6230 6645 2.734175 CGTGCTAGCCTTACGTCATTCA 60.734 50.000 13.29 0.00 33.48 2.57
6231 6646 1.852895 CGTGCTAGCCTTACGTCATTC 59.147 52.381 13.29 0.00 33.48 2.67
6232 6647 1.475280 TCGTGCTAGCCTTACGTCATT 59.525 47.619 21.13 0.00 38.80 2.57
6233 6648 1.100510 TCGTGCTAGCCTTACGTCAT 58.899 50.000 21.13 0.00 38.80 3.06
6234 6649 1.065102 GATCGTGCTAGCCTTACGTCA 59.935 52.381 21.13 7.68 38.80 4.35
6235 6650 1.065102 TGATCGTGCTAGCCTTACGTC 59.935 52.381 21.13 17.81 38.80 4.34
6236 6651 1.100510 TGATCGTGCTAGCCTTACGT 58.899 50.000 21.13 11.61 38.80 3.57
6237 6652 1.202256 TGTGATCGTGCTAGCCTTACG 60.202 52.381 17.35 17.35 39.04 3.18
6238 6653 2.579207 TGTGATCGTGCTAGCCTTAC 57.421 50.000 13.29 2.62 0.00 2.34
6239 6654 3.259064 GTTTGTGATCGTGCTAGCCTTA 58.741 45.455 13.29 0.00 0.00 2.69
6240 6655 2.076863 GTTTGTGATCGTGCTAGCCTT 58.923 47.619 13.29 0.00 0.00 4.35
6241 6656 1.726853 GTTTGTGATCGTGCTAGCCT 58.273 50.000 13.29 0.00 0.00 4.58
6242 6657 0.370273 CGTTTGTGATCGTGCTAGCC 59.630 55.000 13.29 2.49 0.00 3.93
6243 6658 0.370273 CCGTTTGTGATCGTGCTAGC 59.630 55.000 8.10 8.10 0.00 3.42
6244 6659 1.654105 GTCCGTTTGTGATCGTGCTAG 59.346 52.381 0.00 0.00 0.00 3.42
6245 6660 1.000052 TGTCCGTTTGTGATCGTGCTA 60.000 47.619 0.00 0.00 0.00 3.49
6246 6661 0.249699 TGTCCGTTTGTGATCGTGCT 60.250 50.000 0.00 0.00 0.00 4.40
6247 6662 0.796312 ATGTCCGTTTGTGATCGTGC 59.204 50.000 0.00 0.00 0.00 5.34
6248 6663 3.225548 CAAATGTCCGTTTGTGATCGTG 58.774 45.455 4.21 0.00 35.02 4.35
6249 6664 3.536158 CAAATGTCCGTTTGTGATCGT 57.464 42.857 4.21 0.00 35.02 3.73
6262 6677 3.559238 AATGCGAACAGGACAAATGTC 57.441 42.857 4.96 4.96 44.04 3.06
6263 6678 4.050553 CAAAATGCGAACAGGACAAATGT 58.949 39.130 0.00 0.00 0.00 2.71
6264 6679 4.050553 ACAAAATGCGAACAGGACAAATG 58.949 39.130 0.00 0.00 0.00 2.32
6265 6680 4.320608 ACAAAATGCGAACAGGACAAAT 57.679 36.364 0.00 0.00 0.00 2.32
6266 6681 3.791973 ACAAAATGCGAACAGGACAAA 57.208 38.095 0.00 0.00 0.00 2.83
6267 6682 3.701241 GAACAAAATGCGAACAGGACAA 58.299 40.909 0.00 0.00 0.00 3.18
6268 6683 2.286713 CGAACAAAATGCGAACAGGACA 60.287 45.455 0.00 0.00 0.00 4.02
6269 6684 2.286772 ACGAACAAAATGCGAACAGGAC 60.287 45.455 0.00 0.00 0.00 3.85
6270 6685 1.944024 ACGAACAAAATGCGAACAGGA 59.056 42.857 0.00 0.00 0.00 3.86
6271 6686 2.399396 ACGAACAAAATGCGAACAGG 57.601 45.000 0.00 0.00 0.00 4.00
6272 6687 3.061271 CCAAACGAACAAAATGCGAACAG 60.061 43.478 0.00 0.00 0.00 3.16
6273 6688 2.854777 CCAAACGAACAAAATGCGAACA 59.145 40.909 0.00 0.00 0.00 3.18
6274 6689 2.217620 CCCAAACGAACAAAATGCGAAC 59.782 45.455 0.00 0.00 0.00 3.95
6275 6690 2.464865 CCCAAACGAACAAAATGCGAA 58.535 42.857 0.00 0.00 0.00 4.70
6276 6691 1.866063 GCCCAAACGAACAAAATGCGA 60.866 47.619 0.00 0.00 0.00 5.10
6277 6692 0.506506 GCCCAAACGAACAAAATGCG 59.493 50.000 0.00 0.00 0.00 4.73
6278 6693 0.865111 GGCCCAAACGAACAAAATGC 59.135 50.000 0.00 0.00 0.00 3.56
6279 6694 1.135867 CGGCCCAAACGAACAAAATG 58.864 50.000 0.00 0.00 0.00 2.32
6280 6695 0.032815 CCGGCCCAAACGAACAAAAT 59.967 50.000 0.00 0.00 0.00 1.82
6281 6696 1.437986 CCGGCCCAAACGAACAAAA 59.562 52.632 0.00 0.00 0.00 2.44
6282 6697 2.491022 CCCGGCCCAAACGAACAAA 61.491 57.895 0.00 0.00 0.00 2.83
6283 6698 2.907917 CCCGGCCCAAACGAACAA 60.908 61.111 0.00 0.00 0.00 2.83
6286 6701 4.896829 TTGCCCGGCCCAAACGAA 62.897 61.111 7.03 0.00 0.00 3.85
6287 6702 4.896829 TTTGCCCGGCCCAAACGA 62.897 61.111 7.03 0.00 0.00 3.85
6288 6703 3.857109 CTTTTGCCCGGCCCAAACG 62.857 63.158 15.43 11.34 32.40 3.60
6289 6704 2.030412 CTTTTGCCCGGCCCAAAC 59.970 61.111 15.43 0.00 32.40 2.93
6290 6705 3.237741 CCTTTTGCCCGGCCCAAA 61.238 61.111 7.03 12.72 0.00 3.28
6298 6713 4.056125 GACGCTGCCCTTTTGCCC 62.056 66.667 0.00 0.00 0.00 5.36
6299 6714 4.056125 GGACGCTGCCCTTTTGCC 62.056 66.667 0.00 0.00 0.00 4.52
6300 6715 3.273080 CTGGACGCTGCCCTTTTGC 62.273 63.158 0.00 0.00 0.00 3.68
6301 6716 2.956987 CTGGACGCTGCCCTTTTG 59.043 61.111 0.00 0.00 0.00 2.44
6302 6717 2.985847 GCTGGACGCTGCCCTTTT 60.986 61.111 0.00 0.00 35.14 2.27
6308 6723 3.042560 AAAAAGGCTGGACGCTGC 58.957 55.556 0.00 0.00 39.13 5.25
6322 6737 3.865745 CACGGCCAACACAAATGTAAAAA 59.134 39.130 2.24 0.00 38.45 1.94
6323 6738 3.448686 CACGGCCAACACAAATGTAAAA 58.551 40.909 2.24 0.00 38.45 1.52
6324 6739 2.799917 GCACGGCCAACACAAATGTAAA 60.800 45.455 2.24 0.00 38.45 2.01
6325 6740 1.269309 GCACGGCCAACACAAATGTAA 60.269 47.619 2.24 0.00 38.45 2.41
6326 6741 0.312416 GCACGGCCAACACAAATGTA 59.688 50.000 2.24 0.00 38.45 2.29
6327 6742 1.067250 GCACGGCCAACACAAATGT 59.933 52.632 2.24 0.00 42.46 2.71
6328 6743 0.664166 GAGCACGGCCAACACAAATG 60.664 55.000 2.24 0.00 0.00 2.32
6329 6744 1.659794 GAGCACGGCCAACACAAAT 59.340 52.632 2.24 0.00 0.00 2.32
6330 6745 2.485795 GGAGCACGGCCAACACAAA 61.486 57.895 2.24 0.00 0.00 2.83
6331 6746 2.904866 GGAGCACGGCCAACACAA 60.905 61.111 2.24 0.00 0.00 3.33
6332 6747 4.947147 GGGAGCACGGCCAACACA 62.947 66.667 2.24 0.00 0.00 3.72
6333 6748 4.947147 TGGGAGCACGGCCAACAC 62.947 66.667 2.24 0.00 0.00 3.32
6334 6749 3.505790 ATTGGGAGCACGGCCAACA 62.506 57.895 2.24 0.00 0.00 3.33
6335 6750 2.676471 ATTGGGAGCACGGCCAAC 60.676 61.111 2.24 0.00 0.00 3.77
6336 6751 2.676121 CATTGGGAGCACGGCCAA 60.676 61.111 2.24 0.00 0.00 4.52
6337 6752 4.738998 CCATTGGGAGCACGGCCA 62.739 66.667 2.24 0.00 35.59 5.36
6338 6753 4.424711 TCCATTGGGAGCACGGCC 62.425 66.667 2.09 0.00 38.64 6.13
6347 6762 5.452356 GCCAAAATTCTAGTCATCCATTGGG 60.452 44.000 2.09 0.00 36.24 4.12
6348 6763 5.127519 TGCCAAAATTCTAGTCATCCATTGG 59.872 40.000 0.00 0.00 38.21 3.16
6349 6764 6.038356 GTGCCAAAATTCTAGTCATCCATTG 58.962 40.000 0.00 0.00 0.00 2.82
6350 6765 5.127682 GGTGCCAAAATTCTAGTCATCCATT 59.872 40.000 0.00 0.00 0.00 3.16
6351 6766 4.646492 GGTGCCAAAATTCTAGTCATCCAT 59.354 41.667 0.00 0.00 0.00 3.41
6352 6767 4.016444 GGTGCCAAAATTCTAGTCATCCA 58.984 43.478 0.00 0.00 0.00 3.41
6353 6768 3.065371 CGGTGCCAAAATTCTAGTCATCC 59.935 47.826 0.00 0.00 0.00 3.51
6354 6769 3.689649 ACGGTGCCAAAATTCTAGTCATC 59.310 43.478 0.00 0.00 0.00 2.92
6355 6770 3.440173 CACGGTGCCAAAATTCTAGTCAT 59.560 43.478 0.00 0.00 0.00 3.06
6356 6771 2.811431 CACGGTGCCAAAATTCTAGTCA 59.189 45.455 0.00 0.00 0.00 3.41
6357 6772 2.161609 CCACGGTGCCAAAATTCTAGTC 59.838 50.000 1.68 0.00 0.00 2.59
6358 6773 2.159382 CCACGGTGCCAAAATTCTAGT 58.841 47.619 1.68 0.00 0.00 2.57
6359 6774 2.159382 ACCACGGTGCCAAAATTCTAG 58.841 47.619 1.68 0.00 0.00 2.43
6360 6775 2.279935 ACCACGGTGCCAAAATTCTA 57.720 45.000 1.68 0.00 0.00 2.10
6361 6776 1.408969 AACCACGGTGCCAAAATTCT 58.591 45.000 1.68 0.00 0.00 2.40
6362 6777 3.586100 ATAACCACGGTGCCAAAATTC 57.414 42.857 1.68 0.00 0.00 2.17
6363 6778 4.083565 ACTATAACCACGGTGCCAAAATT 58.916 39.130 1.68 0.00 0.00 1.82
6364 6779 3.692690 ACTATAACCACGGTGCCAAAAT 58.307 40.909 1.68 0.00 0.00 1.82
6365 6780 3.143211 ACTATAACCACGGTGCCAAAA 57.857 42.857 1.68 0.00 0.00 2.44
6366 6781 2.863132 ACTATAACCACGGTGCCAAA 57.137 45.000 1.68 0.00 0.00 3.28
6367 6782 2.038689 TGAACTATAACCACGGTGCCAA 59.961 45.455 1.68 0.00 0.00 4.52
6368 6783 1.624312 TGAACTATAACCACGGTGCCA 59.376 47.619 1.68 0.00 0.00 4.92
6369 6784 2.389962 TGAACTATAACCACGGTGCC 57.610 50.000 1.68 0.00 0.00 5.01
6370 6785 2.031683 GCATGAACTATAACCACGGTGC 59.968 50.000 1.68 0.00 0.00 5.01
6371 6786 2.612212 GGCATGAACTATAACCACGGTG 59.388 50.000 0.00 0.00 0.00 4.94
6372 6787 2.740580 CGGCATGAACTATAACCACGGT 60.741 50.000 0.00 0.00 0.00 4.83
6373 6788 1.864711 CGGCATGAACTATAACCACGG 59.135 52.381 0.00 0.00 0.00 4.94
6374 6789 2.538449 GTCGGCATGAACTATAACCACG 59.462 50.000 0.00 0.00 0.00 4.94
6375 6790 2.870411 GGTCGGCATGAACTATAACCAC 59.130 50.000 0.00 0.00 0.00 4.16
6376 6791 2.502130 TGGTCGGCATGAACTATAACCA 59.498 45.455 0.00 0.00 34.43 3.67
6377 6792 3.131396 CTGGTCGGCATGAACTATAACC 58.869 50.000 0.00 0.00 34.43 2.85
6378 6793 4.054780 TCTGGTCGGCATGAACTATAAC 57.945 45.455 0.00 0.00 34.43 1.89
6379 6794 4.558697 CGATCTGGTCGGCATGAACTATAA 60.559 45.833 1.55 0.00 46.47 0.98
6380 6795 3.057526 CGATCTGGTCGGCATGAACTATA 60.058 47.826 1.55 0.00 46.47 1.31
6381 6796 2.288457 CGATCTGGTCGGCATGAACTAT 60.288 50.000 1.55 0.00 46.47 2.12
6382 6797 1.067060 CGATCTGGTCGGCATGAACTA 59.933 52.381 1.55 0.00 46.47 2.24
6383 6798 0.179100 CGATCTGGTCGGCATGAACT 60.179 55.000 1.55 0.00 46.47 3.01
6384 6799 2.301505 CGATCTGGTCGGCATGAAC 58.698 57.895 1.55 0.00 46.47 3.18
6385 6800 4.833811 CGATCTGGTCGGCATGAA 57.166 55.556 1.55 0.00 46.47 2.57
6393 6808 1.591863 GGCCGCTAACGATCTGGTC 60.592 63.158 0.00 0.00 43.93 4.02
6394 6809 2.499685 GGCCGCTAACGATCTGGT 59.500 61.111 0.00 0.00 43.93 4.00
6395 6810 2.658593 CGGCCGCTAACGATCTGG 60.659 66.667 14.67 0.00 43.93 3.86
6396 6811 2.658593 CCGGCCGCTAACGATCTG 60.659 66.667 22.85 0.00 43.93 2.90
6397 6812 4.587189 GCCGGCCGCTAACGATCT 62.587 66.667 22.85 0.00 43.93 2.75
6398 6813 4.884257 TGCCGGCCGCTAACGATC 62.884 66.667 26.77 0.82 43.93 3.69
6403 6818 4.402528 ATGTGTGCCGGCCGCTAA 62.403 61.111 26.77 6.14 38.78 3.09
6414 6829 1.246649 TTTGTAGGCTGGCATGTGTG 58.753 50.000 3.38 0.00 0.00 3.82
6415 6830 1.993956 TTTTGTAGGCTGGCATGTGT 58.006 45.000 3.38 0.00 0.00 3.72
6416 6831 2.492881 TCATTTTGTAGGCTGGCATGTG 59.507 45.455 3.38 0.00 0.00 3.21
6417 6832 2.806434 TCATTTTGTAGGCTGGCATGT 58.194 42.857 3.38 0.00 0.00 3.21
6418 6833 3.382227 TGATCATTTTGTAGGCTGGCATG 59.618 43.478 3.38 0.00 0.00 4.06
6419 6834 3.634504 TGATCATTTTGTAGGCTGGCAT 58.365 40.909 3.38 0.00 0.00 4.40
6420 6835 3.084536 TGATCATTTTGTAGGCTGGCA 57.915 42.857 3.38 0.00 0.00 4.92
6421 6836 3.429410 GGTTGATCATTTTGTAGGCTGGC 60.429 47.826 0.00 0.00 0.00 4.85
6422 6837 3.131046 GGGTTGATCATTTTGTAGGCTGG 59.869 47.826 0.00 0.00 0.00 4.85
6423 6838 3.131046 GGGGTTGATCATTTTGTAGGCTG 59.869 47.826 0.00 0.00 0.00 4.85
6424 6839 3.365472 GGGGTTGATCATTTTGTAGGCT 58.635 45.455 0.00 0.00 0.00 4.58
6425 6840 2.430694 GGGGGTTGATCATTTTGTAGGC 59.569 50.000 0.00 0.00 0.00 3.93
6426 6841 3.707316 TGGGGGTTGATCATTTTGTAGG 58.293 45.455 0.00 0.00 0.00 3.18
6427 6842 4.772100 ACTTGGGGGTTGATCATTTTGTAG 59.228 41.667 0.00 0.00 0.00 2.74
6428 6843 4.746466 ACTTGGGGGTTGATCATTTTGTA 58.254 39.130 0.00 0.00 0.00 2.41
6429 6844 3.586429 ACTTGGGGGTTGATCATTTTGT 58.414 40.909 0.00 0.00 0.00 2.83
6430 6845 4.622260 AACTTGGGGGTTGATCATTTTG 57.378 40.909 0.00 0.00 0.00 2.44
6431 6846 5.645056 AAAACTTGGGGGTTGATCATTTT 57.355 34.783 0.00 0.00 0.00 1.82
6432 6847 5.645056 AAAAACTTGGGGGTTGATCATTT 57.355 34.783 0.00 0.00 0.00 2.32
6433 6848 5.248248 CCTAAAAACTTGGGGGTTGATCATT 59.752 40.000 0.00 0.00 0.00 2.57
6434 6849 4.777366 CCTAAAAACTTGGGGGTTGATCAT 59.223 41.667 0.00 0.00 0.00 2.45
6435 6850 4.156477 CCTAAAAACTTGGGGGTTGATCA 58.844 43.478 0.00 0.00 0.00 2.92
6436 6851 3.056107 GCCTAAAAACTTGGGGGTTGATC 60.056 47.826 0.00 0.00 0.00 2.92
6437 6852 2.903784 GCCTAAAAACTTGGGGGTTGAT 59.096 45.455 0.00 0.00 0.00 2.57
6438 6853 2.321719 GCCTAAAAACTTGGGGGTTGA 58.678 47.619 0.00 0.00 0.00 3.18
6439 6854 1.346395 GGCCTAAAAACTTGGGGGTTG 59.654 52.381 0.00 0.00 0.00 3.77
6440 6855 1.724545 GGCCTAAAAACTTGGGGGTT 58.275 50.000 0.00 0.00 0.00 4.11
6441 6856 0.541063 CGGCCTAAAAACTTGGGGGT 60.541 55.000 0.00 0.00 0.00 4.95
6442 6857 0.251430 TCGGCCTAAAAACTTGGGGG 60.251 55.000 0.00 0.00 0.00 5.40
6443 6858 1.847328 ATCGGCCTAAAAACTTGGGG 58.153 50.000 0.00 0.00 0.00 4.96
6444 6859 3.759618 TGTTATCGGCCTAAAAACTTGGG 59.240 43.478 0.00 0.00 0.00 4.12
6445 6860 5.379732 TTGTTATCGGCCTAAAAACTTGG 57.620 39.130 0.00 0.00 0.00 3.61
6446 6861 5.344933 GCTTTGTTATCGGCCTAAAAACTTG 59.655 40.000 0.00 0.00 0.00 3.16
6447 6862 5.466819 GCTTTGTTATCGGCCTAAAAACTT 58.533 37.500 0.00 0.00 0.00 2.66
6448 6863 4.379082 CGCTTTGTTATCGGCCTAAAAACT 60.379 41.667 0.00 0.00 0.00 2.66
6449 6864 3.849708 CGCTTTGTTATCGGCCTAAAAAC 59.150 43.478 0.00 0.00 0.00 2.43
6450 6865 3.752222 TCGCTTTGTTATCGGCCTAAAAA 59.248 39.130 0.00 0.00 0.00 1.94
6451 6866 3.336468 TCGCTTTGTTATCGGCCTAAAA 58.664 40.909 0.00 0.00 0.00 1.52
6452 6867 2.933906 CTCGCTTTGTTATCGGCCTAAA 59.066 45.455 0.00 0.00 0.00 1.85
6453 6868 2.546778 CTCGCTTTGTTATCGGCCTAA 58.453 47.619 0.00 0.00 0.00 2.69
6454 6869 1.805120 GCTCGCTTTGTTATCGGCCTA 60.805 52.381 0.00 0.00 0.00 3.93
6455 6870 1.090052 GCTCGCTTTGTTATCGGCCT 61.090 55.000 0.00 0.00 0.00 5.19
6456 6871 1.352056 GCTCGCTTTGTTATCGGCC 59.648 57.895 0.00 0.00 0.00 6.13
6457 6872 1.012234 CGCTCGCTTTGTTATCGGC 60.012 57.895 0.00 0.00 0.00 5.54
6458 6873 1.636340 CCGCTCGCTTTGTTATCGG 59.364 57.895 0.00 0.00 0.00 4.18
6459 6874 1.012234 GCCGCTCGCTTTGTTATCG 60.012 57.895 0.00 0.00 0.00 2.92
6460 6875 4.976619 GCCGCTCGCTTTGTTATC 57.023 55.556 0.00 0.00 0.00 1.75
6469 6884 1.420312 GTGAAAACTAGCCGCTCGC 59.580 57.895 0.00 0.00 37.98 5.03
6470 6885 1.702299 CGTGAAAACTAGCCGCTCG 59.298 57.895 0.00 0.00 0.00 5.03
6471 6886 1.420312 GCGTGAAAACTAGCCGCTC 59.580 57.895 0.00 0.00 41.06 5.03
6472 6887 3.562635 GCGTGAAAACTAGCCGCT 58.437 55.556 0.00 0.00 41.06 5.52
6473 6888 1.132640 CAGCGTGAAAACTAGCCGC 59.867 57.895 0.00 0.00 44.35 6.53
6474 6889 1.787847 CCAGCGTGAAAACTAGCCG 59.212 57.895 0.00 0.00 0.00 5.52
6475 6890 1.234615 TGCCAGCGTGAAAACTAGCC 61.235 55.000 0.00 0.00 0.00 3.93
6476 6891 0.591170 TTGCCAGCGTGAAAACTAGC 59.409 50.000 0.00 0.00 0.00 3.42
6477 6892 2.483877 TCATTGCCAGCGTGAAAACTAG 59.516 45.455 0.00 0.00 0.00 2.57
6478 6893 2.499197 TCATTGCCAGCGTGAAAACTA 58.501 42.857 0.00 0.00 0.00 2.24
6479 6894 1.317613 TCATTGCCAGCGTGAAAACT 58.682 45.000 0.00 0.00 0.00 2.66
6480 6895 2.053627 CTTCATTGCCAGCGTGAAAAC 58.946 47.619 10.28 0.00 32.08 2.43
6481 6896 1.602668 GCTTCATTGCCAGCGTGAAAA 60.603 47.619 10.28 0.00 32.08 2.29
6482 6897 0.039256 GCTTCATTGCCAGCGTGAAA 60.039 50.000 10.28 0.00 32.08 2.69
6483 6898 1.580942 GCTTCATTGCCAGCGTGAA 59.419 52.632 9.13 9.13 0.00 3.18
6484 6899 3.266964 GCTTCATTGCCAGCGTGA 58.733 55.556 0.00 0.00 0.00 4.35
6492 6907 1.154225 CGACCGTTGGCTTCATTGC 60.154 57.895 0.00 0.00 0.00 3.56
6493 6908 1.501741 CCGACCGTTGGCTTCATTG 59.498 57.895 0.00 0.00 0.00 2.82
6494 6909 3.981308 CCGACCGTTGGCTTCATT 58.019 55.556 0.00 0.00 0.00 2.57
6501 6916 2.590575 AAGTGTGCCGACCGTTGG 60.591 61.111 0.00 0.00 0.00 3.77
6502 6917 2.631428 CAAGTGTGCCGACCGTTG 59.369 61.111 0.00 0.00 0.00 4.10
6503 6918 3.276846 GCAAGTGTGCCGACCGTT 61.277 61.111 0.00 0.00 45.68 4.44
6512 6927 1.108727 TTGGAAGGCTGGCAAGTGTG 61.109 55.000 3.38 0.00 0.00 3.82
6513 6928 0.396974 TTTGGAAGGCTGGCAAGTGT 60.397 50.000 3.38 0.00 0.00 3.55
6514 6929 0.752054 TTTTGGAAGGCTGGCAAGTG 59.248 50.000 3.38 0.00 0.00 3.16
6515 6930 1.413812 CTTTTTGGAAGGCTGGCAAGT 59.586 47.619 3.38 0.00 0.00 3.16
6516 6931 1.270465 CCTTTTTGGAAGGCTGGCAAG 60.270 52.381 3.38 0.00 38.35 4.01
6517 6932 0.758123 CCTTTTTGGAAGGCTGGCAA 59.242 50.000 3.38 0.00 38.35 4.52
6518 6933 2.439837 CCTTTTTGGAAGGCTGGCA 58.560 52.632 3.38 0.00 38.35 4.92
6524 6939 3.831911 TGAACTATGGCCTTTTTGGAAGG 59.168 43.478 3.32 0.45 40.39 3.46
6525 6940 5.047092 ACATGAACTATGGCCTTTTTGGAAG 60.047 40.000 3.32 0.00 41.25 3.46
6526 6941 4.837860 ACATGAACTATGGCCTTTTTGGAA 59.162 37.500 3.32 0.00 41.25 3.53
6527 6942 4.415596 ACATGAACTATGGCCTTTTTGGA 58.584 39.130 3.32 0.00 41.25 3.53
6528 6943 4.463891 AGACATGAACTATGGCCTTTTTGG 59.536 41.667 3.32 0.00 46.68 3.28
6529 6944 5.644644 GAGACATGAACTATGGCCTTTTTG 58.355 41.667 3.32 0.00 46.68 2.44
6530 6945 4.396166 CGAGACATGAACTATGGCCTTTTT 59.604 41.667 3.32 0.00 46.68 1.94
6531 6946 3.941483 CGAGACATGAACTATGGCCTTTT 59.059 43.478 3.32 0.00 46.68 2.27
6532 6947 3.535561 CGAGACATGAACTATGGCCTTT 58.464 45.455 3.32 0.00 46.68 3.11
6533 6948 2.743183 GCGAGACATGAACTATGGCCTT 60.743 50.000 3.32 0.00 46.68 4.35
6534 6949 1.202580 GCGAGACATGAACTATGGCCT 60.203 52.381 3.32 0.00 46.68 5.19
6535 6950 1.221414 GCGAGACATGAACTATGGCC 58.779 55.000 0.00 0.00 46.68 5.36
6536 6951 1.863454 CTGCGAGACATGAACTATGGC 59.137 52.381 0.00 4.21 45.78 4.40
6537 6952 1.863454 GCTGCGAGACATGAACTATGG 59.137 52.381 0.00 0.00 41.25 2.74
6538 6953 1.863454 GGCTGCGAGACATGAACTATG 59.137 52.381 0.00 0.00 42.68 2.23
6539 6954 1.759445 AGGCTGCGAGACATGAACTAT 59.241 47.619 0.00 0.00 0.00 2.12
6540 6955 1.186200 AGGCTGCGAGACATGAACTA 58.814 50.000 0.00 0.00 0.00 2.24
6541 6956 0.322975 AAGGCTGCGAGACATGAACT 59.677 50.000 0.00 0.00 0.00 3.01
6542 6957 0.723981 GAAGGCTGCGAGACATGAAC 59.276 55.000 0.00 0.00 0.00 3.18
6543 6958 0.391661 GGAAGGCTGCGAGACATGAA 60.392 55.000 0.00 0.00 0.00 2.57
6544 6959 1.219124 GGAAGGCTGCGAGACATGA 59.781 57.895 0.00 0.00 0.00 3.07
6545 6960 0.461548 TAGGAAGGCTGCGAGACATG 59.538 55.000 0.00 0.00 0.00 3.21
6546 6961 0.749649 CTAGGAAGGCTGCGAGACAT 59.250 55.000 0.00 0.00 0.00 3.06
6547 6962 1.323271 CCTAGGAAGGCTGCGAGACA 61.323 60.000 1.05 0.00 35.64 3.41
6548 6963 1.439644 CCTAGGAAGGCTGCGAGAC 59.560 63.158 1.05 0.00 35.64 3.36
6549 6964 3.941081 CCTAGGAAGGCTGCGAGA 58.059 61.111 1.05 0.00 35.64 4.04
6558 6973 1.115467 AGACGGCATGACCTAGGAAG 58.885 55.000 17.98 2.92 35.61 3.46
6559 6974 1.207089 CAAGACGGCATGACCTAGGAA 59.793 52.381 17.98 3.21 35.61 3.36
6560 6975 0.824109 CAAGACGGCATGACCTAGGA 59.176 55.000 17.98 0.00 35.61 2.94
6561 6976 0.179073 CCAAGACGGCATGACCTAGG 60.179 60.000 7.41 7.41 35.61 3.02
6562 6977 0.537188 ACCAAGACGGCATGACCTAG 59.463 55.000 0.00 0.00 39.03 3.02
6563 6978 0.535335 GACCAAGACGGCATGACCTA 59.465 55.000 0.00 0.00 39.03 3.08
6564 6979 1.296715 GACCAAGACGGCATGACCT 59.703 57.895 0.00 0.00 39.03 3.85
6565 6980 2.100631 CGACCAAGACGGCATGACC 61.101 63.158 0.00 0.00 39.03 4.02
6566 6981 0.669318 TTCGACCAAGACGGCATGAC 60.669 55.000 0.00 0.00 39.03 3.06
6567 6982 0.669318 GTTCGACCAAGACGGCATGA 60.669 55.000 0.00 0.00 39.03 3.07
6568 6983 0.948623 TGTTCGACCAAGACGGCATG 60.949 55.000 0.00 0.00 39.03 4.06
6569 6984 0.036388 ATGTTCGACCAAGACGGCAT 60.036 50.000 0.00 0.00 39.03 4.40
6570 6985 0.669318 GATGTTCGACCAAGACGGCA 60.669 55.000 0.00 0.00 39.03 5.69
6571 6986 0.389948 AGATGTTCGACCAAGACGGC 60.390 55.000 0.00 0.00 39.03 5.68
6572 6987 1.630148 GAGATGTTCGACCAAGACGG 58.370 55.000 0.00 0.00 42.50 4.79
6573 6988 1.202582 AGGAGATGTTCGACCAAGACG 59.797 52.381 0.00 0.00 0.00 4.18
6574 6989 3.320673 AAGGAGATGTTCGACCAAGAC 57.679 47.619 0.00 0.00 0.00 3.01
6575 6990 4.065088 CAAAAGGAGATGTTCGACCAAGA 58.935 43.478 0.00 0.00 0.00 3.02
6576 6991 3.365364 GCAAAAGGAGATGTTCGACCAAG 60.365 47.826 0.00 0.00 0.00 3.61
6577 6992 2.552315 GCAAAAGGAGATGTTCGACCAA 59.448 45.455 0.00 0.00 0.00 3.67
6578 6993 2.151202 GCAAAAGGAGATGTTCGACCA 58.849 47.619 0.00 0.00 0.00 4.02
6579 6994 1.468914 GGCAAAAGGAGATGTTCGACC 59.531 52.381 0.00 0.00 0.00 4.79
6580 6995 2.427506 AGGCAAAAGGAGATGTTCGAC 58.572 47.619 0.00 0.00 0.00 4.20
6581 6996 2.859165 AGGCAAAAGGAGATGTTCGA 57.141 45.000 0.00 0.00 0.00 3.71
6582 6997 3.923017 AAAGGCAAAAGGAGATGTTCG 57.077 42.857 0.00 0.00 0.00 3.95
6583 6998 5.010012 TGAGAAAAGGCAAAAGGAGATGTTC 59.990 40.000 0.00 0.00 0.00 3.18
6584 6999 4.895297 TGAGAAAAGGCAAAAGGAGATGTT 59.105 37.500 0.00 0.00 0.00 2.71
6585 7000 4.473444 TGAGAAAAGGCAAAAGGAGATGT 58.527 39.130 0.00 0.00 0.00 3.06
6586 7001 5.458041 TTGAGAAAAGGCAAAAGGAGATG 57.542 39.130 0.00 0.00 0.00 2.90
6587 7002 5.221521 GGTTTGAGAAAAGGCAAAAGGAGAT 60.222 40.000 0.00 0.00 35.95 2.75
6588 7003 4.099419 GGTTTGAGAAAAGGCAAAAGGAGA 59.901 41.667 0.00 0.00 35.95 3.71
6589 7004 4.141959 TGGTTTGAGAAAAGGCAAAAGGAG 60.142 41.667 0.00 0.00 35.95 3.69
6590 7005 3.772025 TGGTTTGAGAAAAGGCAAAAGGA 59.228 39.130 0.00 0.00 35.95 3.36
6591 7006 4.135747 TGGTTTGAGAAAAGGCAAAAGG 57.864 40.909 0.00 0.00 35.95 3.11
6592 7007 5.178061 AGTTGGTTTGAGAAAAGGCAAAAG 58.822 37.500 0.00 0.00 35.95 2.27
6593 7008 5.159273 AGTTGGTTTGAGAAAAGGCAAAA 57.841 34.783 0.00 0.00 35.95 2.44
6594 7009 4.817318 AGTTGGTTTGAGAAAAGGCAAA 57.183 36.364 0.00 0.00 0.00 3.68
6595 7010 4.466015 AGAAGTTGGTTTGAGAAAAGGCAA 59.534 37.500 0.00 0.00 0.00 4.52
6596 7011 4.023291 AGAAGTTGGTTTGAGAAAAGGCA 58.977 39.130 0.00 0.00 0.00 4.75
6597 7012 4.655762 AGAAGTTGGTTTGAGAAAAGGC 57.344 40.909 0.00 0.00 0.00 4.35


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.