Multiple sequence alignment - TraesCS4B01G064100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G064100 chr4B 100.000 5464 0 0 1 5464 56990265 56984802 0.000000e+00 10091.0
1 TraesCS4B01G064100 chr4B 86.327 373 32 9 117 484 12847956 12848314 6.640000e-104 388.0
2 TraesCS4B01G064100 chr4B 94.595 37 2 0 5070 5106 201526931 201526895 2.130000e-04 58.4
3 TraesCS4B01G064100 chr4A 92.978 2364 116 23 552 2881 562286677 562284330 0.000000e+00 3400.0
4 TraesCS4B01G064100 chr4A 93.487 2088 86 19 3021 5097 562283872 562281824 0.000000e+00 3057.0
5 TraesCS4B01G064100 chr4A 94.465 271 14 1 5195 5464 562281751 562281481 3.040000e-112 416.0
6 TraesCS4B01G064100 chr4A 96.183 131 4 1 2894 3023 562284064 562283934 4.290000e-51 213.0
7 TraesCS4B01G064100 chr4A 87.755 49 5 1 5074 5122 521302928 521302881 7.650000e-04 56.5
8 TraesCS4B01G064100 chr4A 100.000 28 0 0 2883 2910 562284213 562284186 1.000000e-02 52.8
9 TraesCS4B01G064100 chr4D 96.697 1332 40 3 2786 4116 39210914 39209586 0.000000e+00 2213.0
10 TraesCS4B01G064100 chr4D 97.002 934 22 5 1861 2790 39211945 39211014 0.000000e+00 1565.0
11 TraesCS4B01G064100 chr4D 90.538 1152 67 19 542 1676 39213071 39211945 0.000000e+00 1485.0
12 TraesCS4B01G064100 chr4D 92.579 822 33 12 4205 5023 39209346 39208550 0.000000e+00 1155.0
13 TraesCS4B01G064100 chr4D 87.169 491 45 8 1 484 139307998 139307519 4.810000e-150 542.0
14 TraesCS4B01G064100 chr4D 86.151 491 50 8 1 486 470857937 470857460 1.050000e-141 514.0
15 TraesCS4B01G064100 chr4D 93.949 314 11 5 5157 5464 39208321 39208010 8.290000e-128 468.0
16 TraesCS4B01G064100 chr2D 88.211 492 41 7 1 486 640638248 640637768 6.140000e-159 571.0
17 TraesCS4B01G064100 chr2D 85.872 453 38 8 1 439 403192252 403191812 4.990000e-125 459.0
18 TraesCS4B01G064100 chr2D 82.305 486 52 21 1 459 22416468 22415990 1.850000e-104 390.0
19 TraesCS4B01G064100 chr1D 86.939 490 44 13 4 486 5530351 5529875 2.900000e-147 532.0
20 TraesCS4B01G064100 chr5B 85.947 491 40 8 1 487 691261417 691261882 1.060000e-136 497.0
21 TraesCS4B01G064100 chr5B 94.872 39 2 0 5073 5111 534670579 534670541 1.640000e-05 62.1
22 TraesCS4B01G064100 chr5B 92.683 41 2 1 5074 5114 412286384 412286423 2.130000e-04 58.4
23 TraesCS4B01G064100 chr6B 85.540 491 44 15 1 486 24344669 24344201 6.360000e-134 488.0
24 TraesCS4B01G064100 chr6B 85.132 491 46 15 1 486 24261450 24260982 1.380000e-130 477.0
25 TraesCS4B01G064100 chr6A 84.158 505 49 13 1 487 6016967 6016476 1.390000e-125 460.0
26 TraesCS4B01G064100 chr2B 84.254 489 44 14 1 484 49671159 49671619 3.880000e-121 446.0
27 TraesCS4B01G064100 chr2B 83.436 489 48 14 1 484 49701324 49701784 1.820000e-114 424.0
28 TraesCS4B01G064100 chr2B 86.269 335 28 9 160 489 798010773 798010452 1.130000e-91 348.0
29 TraesCS4B01G064100 chr2B 85.484 310 27 9 185 489 797751012 797750716 1.910000e-79 307.0
30 TraesCS4B01G064100 chrUn 83.436 489 48 14 1 484 291354370 291354830 1.820000e-114 424.0
31 TraesCS4B01G064100 chrUn 83.436 489 48 14 1 484 345371752 345372212 1.820000e-114 424.0
32 TraesCS4B01G064100 chr3A 86.761 355 31 7 1 351 728973610 728973952 1.110000e-101 381.0
33 TraesCS4B01G064100 chr6D 91.667 48 4 0 5075 5122 421774295 421774248 3.530000e-07 67.6
34 TraesCS4B01G064100 chr5D 93.023 43 2 1 5070 5112 213216821 213216862 1.640000e-05 62.1
35 TraesCS4B01G064100 chr5D 94.595 37 2 0 5070 5106 28421398 28421434 2.130000e-04 58.4
36 TraesCS4B01G064100 chr3D 94.872 39 2 0 5070 5108 20751861 20751823 1.640000e-05 62.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G064100 chr4B 56984802 56990265 5463 True 10091.00 10091 100.0000 1 5464 1 chr4B.!!$R1 5463
1 TraesCS4B01G064100 chr4A 562281481 562286677 5196 True 1427.76 3400 95.4226 552 5464 5 chr4A.!!$R2 4912
2 TraesCS4B01G064100 chr4D 39208010 39213071 5061 True 1377.20 2213 94.1530 542 5464 5 chr4D.!!$R3 4922

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
30 31 0.035056 GCAACCTGGACTGCATACCT 60.035 55.000 16.91 0.0 38.48 3.08 F
97 98 0.035630 AGCAGAATCTGGTGGAGCAC 60.036 55.000 14.70 0.0 40.87 4.40 F
421 422 0.036294 GCCCCAGAGCCGATTATACC 60.036 60.000 0.00 0.0 0.00 2.73 F
469 470 0.106868 TGCCTCCTGAGATGCCAATG 60.107 55.000 0.00 0.0 33.08 2.82 F
531 532 0.249911 GGCTGGAAGACACGTCTTGT 60.250 55.000 16.84 0.0 46.27 3.16 F
990 1013 0.253327 CTAGAAGCTTCCACCCACCC 59.747 60.000 22.81 0.0 0.00 4.61 F
1517 1552 0.905357 AGAACCGTGATAGCCAGCTT 59.095 50.000 0.00 0.0 0.00 3.74 F
1529 1564 1.280133 AGCCAGCTTGACATGCTAGAA 59.720 47.619 14.86 0.0 38.92 2.10 F
2619 2668 1.618837 GCTAGAAGGATATGGGACGCA 59.381 52.381 0.00 0.0 0.00 5.24 F
3693 4166 0.035458 AGCAGGCAGAGTACAACACC 59.965 55.000 0.00 0.0 0.00 4.16 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1503 1538 1.596260 CATGTCAAGCTGGCTATCACG 59.404 52.381 0.00 0.00 0.00 4.35 R
1577 1612 1.668047 GCAGAGCGCAAAAATCAGCTT 60.668 47.619 11.47 0.00 40.39 3.74 R
1590 1625 2.029244 CCGTTACACAAATAGCAGAGCG 59.971 50.000 0.00 0.00 0.00 5.03 R
1720 1759 3.310774 CCACATCAAGCCTAATCAAGACG 59.689 47.826 0.00 0.00 0.00 4.18 R
1774 1813 3.347077 AAGGTCTGATCCTTGAGCTTG 57.653 47.619 17.87 0.00 45.50 4.01 R
2773 2823 2.149973 AAGGGAAGGATCATGCAACC 57.850 50.000 0.00 0.00 0.00 3.77 R
3015 3423 3.974871 TTCGTACTATCATGTAGCGCA 57.025 42.857 11.47 0.00 0.00 6.09 R
3287 3760 4.164796 ACAGATATTGAGGAGTGCAATCCA 59.835 41.667 32.85 14.86 42.26 3.41 R
3911 4384 0.250124 TGCAGTGGGTACGGTTTCAG 60.250 55.000 0.00 0.00 0.00 3.02 R
5222 5977 0.539051 CTCGGCCTCTTCCTGACAAT 59.461 55.000 0.00 0.00 0.00 2.71 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
28 29 2.482326 GGCAACCTGGACTGCATAC 58.518 57.895 21.20 6.31 40.46 2.39
29 30 1.032114 GGCAACCTGGACTGCATACC 61.032 60.000 21.20 0.00 40.46 2.73
30 31 0.035056 GCAACCTGGACTGCATACCT 60.035 55.000 16.91 0.00 38.48 3.08
31 32 2.014068 GCAACCTGGACTGCATACCTC 61.014 57.143 16.91 0.00 38.48 3.85
32 33 1.278985 CAACCTGGACTGCATACCTCA 59.721 52.381 0.00 0.00 0.00 3.86
33 34 1.198713 ACCTGGACTGCATACCTCAG 58.801 55.000 0.00 4.01 37.56 3.35
34 35 1.198713 CCTGGACTGCATACCTCAGT 58.801 55.000 10.02 0.00 46.46 3.41
35 36 2.292257 ACCTGGACTGCATACCTCAGTA 60.292 50.000 0.00 0.00 44.09 2.74
36 37 2.968574 CCTGGACTGCATACCTCAGTAT 59.031 50.000 10.02 0.00 44.09 2.12
44 45 3.990318 CATACCTCAGTATGCGTCAGA 57.010 47.619 0.61 0.00 46.95 3.27
45 46 4.307443 CATACCTCAGTATGCGTCAGAA 57.693 45.455 0.61 0.00 46.95 3.02
46 47 2.949451 ACCTCAGTATGCGTCAGAAG 57.051 50.000 0.00 0.00 34.76 2.85
47 48 2.447443 ACCTCAGTATGCGTCAGAAGA 58.553 47.619 0.00 0.00 34.76 2.87
48 49 3.027412 ACCTCAGTATGCGTCAGAAGAT 58.973 45.455 0.00 0.00 34.76 2.40
49 50 3.067461 ACCTCAGTATGCGTCAGAAGATC 59.933 47.826 0.00 0.00 34.76 2.75
50 51 3.551863 CCTCAGTATGCGTCAGAAGATCC 60.552 52.174 0.00 0.00 34.76 3.36
51 52 2.033424 TCAGTATGCGTCAGAAGATCCG 59.967 50.000 0.00 0.00 34.76 4.18
52 53 2.033424 CAGTATGCGTCAGAAGATCCGA 59.967 50.000 0.00 0.00 0.00 4.55
53 54 2.292016 AGTATGCGTCAGAAGATCCGAG 59.708 50.000 0.00 0.00 0.00 4.63
54 55 1.393603 ATGCGTCAGAAGATCCGAGA 58.606 50.000 0.00 0.00 0.00 4.04
55 56 0.452184 TGCGTCAGAAGATCCGAGAC 59.548 55.000 0.00 0.00 0.00 3.36
56 57 0.248702 GCGTCAGAAGATCCGAGACC 60.249 60.000 0.00 0.00 0.00 3.85
57 58 0.382515 CGTCAGAAGATCCGAGACCC 59.617 60.000 0.00 0.00 0.00 4.46
58 59 1.475403 GTCAGAAGATCCGAGACCCA 58.525 55.000 0.00 0.00 0.00 4.51
59 60 1.135333 GTCAGAAGATCCGAGACCCAC 59.865 57.143 0.00 0.00 0.00 4.61
60 61 1.186200 CAGAAGATCCGAGACCCACA 58.814 55.000 0.00 0.00 0.00 4.17
61 62 1.759445 CAGAAGATCCGAGACCCACAT 59.241 52.381 0.00 0.00 0.00 3.21
62 63 1.759445 AGAAGATCCGAGACCCACATG 59.241 52.381 0.00 0.00 0.00 3.21
63 64 1.482593 GAAGATCCGAGACCCACATGT 59.517 52.381 0.00 0.00 0.00 3.21
64 65 0.826715 AGATCCGAGACCCACATGTG 59.173 55.000 19.31 19.31 0.00 3.21
65 66 0.811616 GATCCGAGACCCACATGTGC 60.812 60.000 20.81 7.08 0.00 4.57
66 67 1.552799 ATCCGAGACCCACATGTGCA 61.553 55.000 20.81 0.00 0.00 4.57
67 68 1.078214 CCGAGACCCACATGTGCAT 60.078 57.895 20.81 10.04 0.00 3.96
68 69 1.091771 CCGAGACCCACATGTGCATC 61.092 60.000 20.81 18.02 0.00 3.91
69 70 0.391528 CGAGACCCACATGTGCATCA 60.392 55.000 20.81 0.00 0.00 3.07
70 71 1.825090 GAGACCCACATGTGCATCAA 58.175 50.000 20.81 0.00 0.00 2.57
71 72 1.470098 GAGACCCACATGTGCATCAAC 59.530 52.381 20.81 12.75 0.00 3.18
72 73 1.202915 AGACCCACATGTGCATCAACA 60.203 47.619 20.81 0.00 0.00 3.33
73 74 0.961019 ACCCACATGTGCATCAACAC 59.039 50.000 20.81 0.00 41.10 3.32
74 75 0.244450 CCCACATGTGCATCAACACC 59.756 55.000 20.81 0.00 39.93 4.16
75 76 0.244450 CCACATGTGCATCAACACCC 59.756 55.000 20.81 0.00 39.93 4.61
76 77 0.109643 CACATGTGCATCAACACCCG 60.110 55.000 13.94 0.00 39.93 5.28
77 78 1.153978 CATGTGCATCAACACCCGC 60.154 57.895 0.00 0.00 39.93 6.13
78 79 1.603171 ATGTGCATCAACACCCGCA 60.603 52.632 0.00 0.00 39.93 5.69
79 80 1.588824 ATGTGCATCAACACCCGCAG 61.589 55.000 0.00 0.00 39.93 5.18
80 81 3.364441 TGCATCAACACCCGCAGC 61.364 61.111 0.00 0.00 0.00 5.25
81 82 3.364441 GCATCAACACCCGCAGCA 61.364 61.111 0.00 0.00 0.00 4.41
82 83 2.872557 CATCAACACCCGCAGCAG 59.127 61.111 0.00 0.00 0.00 4.24
83 84 1.672030 CATCAACACCCGCAGCAGA 60.672 57.895 0.00 0.00 0.00 4.26
84 85 1.073025 ATCAACACCCGCAGCAGAA 59.927 52.632 0.00 0.00 0.00 3.02
85 86 0.322816 ATCAACACCCGCAGCAGAAT 60.323 50.000 0.00 0.00 0.00 2.40
86 87 0.955428 TCAACACCCGCAGCAGAATC 60.955 55.000 0.00 0.00 0.00 2.52
87 88 0.957395 CAACACCCGCAGCAGAATCT 60.957 55.000 0.00 0.00 0.00 2.40
88 89 0.957395 AACACCCGCAGCAGAATCTG 60.957 55.000 5.78 5.78 37.15 2.90
89 90 2.110967 CACCCGCAGCAGAATCTGG 61.111 63.158 12.66 0.00 34.74 3.86
90 91 2.270205 CCCGCAGCAGAATCTGGT 59.730 61.111 9.41 9.41 43.33 4.00
96 97 2.380365 AGCAGAATCTGGTGGAGCA 58.620 52.632 14.70 0.00 40.87 4.26
97 98 0.035630 AGCAGAATCTGGTGGAGCAC 60.036 55.000 14.70 0.00 40.87 4.40
116 117 3.923354 CTATGGAGGATCAAGGGCG 57.077 57.895 0.00 0.00 36.25 6.13
117 118 1.342074 CTATGGAGGATCAAGGGCGA 58.658 55.000 0.00 0.00 36.25 5.54
118 119 1.001406 CTATGGAGGATCAAGGGCGAC 59.999 57.143 0.00 0.00 36.25 5.19
119 120 2.032860 ATGGAGGATCAAGGGCGACG 62.033 60.000 0.00 0.00 36.25 5.12
120 121 2.586357 GAGGATCAAGGGCGACGC 60.586 66.667 12.43 12.43 33.17 5.19
130 131 4.908877 GGCGACGCCTAGCTCGAC 62.909 72.222 31.30 0.00 46.69 4.20
136 137 4.175489 GCCTAGCTCGACGCGTGA 62.175 66.667 20.70 13.96 45.59 4.35
137 138 2.716244 CCTAGCTCGACGCGTGAT 59.284 61.111 20.70 3.04 45.59 3.06
138 139 1.655654 CCTAGCTCGACGCGTGATG 60.656 63.158 20.70 6.41 45.59 3.07
139 140 1.352056 CTAGCTCGACGCGTGATGA 59.648 57.895 20.70 11.14 45.59 2.92
140 141 0.040870 CTAGCTCGACGCGTGATGAT 60.041 55.000 20.70 7.27 45.59 2.45
141 142 1.194772 CTAGCTCGACGCGTGATGATA 59.805 52.381 20.70 8.14 45.59 2.15
142 143 0.593618 AGCTCGACGCGTGATGATAT 59.406 50.000 20.70 0.17 45.59 1.63
143 144 0.705094 GCTCGACGCGTGATGATATG 59.295 55.000 20.70 1.24 0.00 1.78
144 145 1.663161 GCTCGACGCGTGATGATATGA 60.663 52.381 20.70 0.03 0.00 2.15
145 146 2.237526 CTCGACGCGTGATGATATGAG 58.762 52.381 20.70 6.71 0.00 2.90
146 147 1.602377 TCGACGCGTGATGATATGAGT 59.398 47.619 20.70 0.00 0.00 3.41
147 148 2.032924 TCGACGCGTGATGATATGAGTT 59.967 45.455 20.70 0.00 0.00 3.01
148 149 2.789339 CGACGCGTGATGATATGAGTTT 59.211 45.455 20.70 0.00 0.00 2.66
149 150 3.242944 CGACGCGTGATGATATGAGTTTT 59.757 43.478 20.70 0.00 0.00 2.43
150 151 4.259810 CGACGCGTGATGATATGAGTTTTT 60.260 41.667 20.70 0.00 0.00 1.94
151 152 5.051973 CGACGCGTGATGATATGAGTTTTTA 60.052 40.000 20.70 0.00 0.00 1.52
152 153 6.345803 CGACGCGTGATGATATGAGTTTTTAT 60.346 38.462 20.70 0.00 0.00 1.40
153 154 7.246674 ACGCGTGATGATATGAGTTTTTATT 57.753 32.000 12.93 0.00 0.00 1.40
154 155 7.693952 ACGCGTGATGATATGAGTTTTTATTT 58.306 30.769 12.93 0.00 0.00 1.40
155 156 7.639850 ACGCGTGATGATATGAGTTTTTATTTG 59.360 33.333 12.93 0.00 0.00 2.32
156 157 7.639850 CGCGTGATGATATGAGTTTTTATTTGT 59.360 33.333 0.00 0.00 0.00 2.83
157 158 9.289303 GCGTGATGATATGAGTTTTTATTTGTT 57.711 29.630 0.00 0.00 0.00 2.83
210 211 9.482627 TTTGTTGTTGAACTATTTTGTTGAACT 57.517 25.926 10.04 0.00 41.96 3.01
244 245 8.853077 TCTATTGATTTTCTGTGATGAACTGT 57.147 30.769 0.00 0.00 0.00 3.55
245 246 8.724229 TCTATTGATTTTCTGTGATGAACTGTG 58.276 33.333 0.00 0.00 0.00 3.66
246 247 6.698008 TTGATTTTCTGTGATGAACTGTGT 57.302 33.333 0.00 0.00 0.00 3.72
247 248 6.063640 TGATTTTCTGTGATGAACTGTGTG 57.936 37.500 0.00 0.00 0.00 3.82
248 249 5.821995 TGATTTTCTGTGATGAACTGTGTGA 59.178 36.000 0.00 0.00 0.00 3.58
249 250 6.487668 TGATTTTCTGTGATGAACTGTGTGAT 59.512 34.615 0.00 0.00 0.00 3.06
250 251 7.661027 TGATTTTCTGTGATGAACTGTGTGATA 59.339 33.333 0.00 0.00 0.00 2.15
251 252 7.800155 TTTTCTGTGATGAACTGTGTGATAA 57.200 32.000 0.00 0.00 0.00 1.75
252 253 7.800155 TTTCTGTGATGAACTGTGTGATAAA 57.200 32.000 0.00 0.00 0.00 1.40
253 254 7.800155 TTCTGTGATGAACTGTGTGATAAAA 57.200 32.000 0.00 0.00 0.00 1.52
254 255 7.800155 TCTGTGATGAACTGTGTGATAAAAA 57.200 32.000 0.00 0.00 0.00 1.94
281 282 9.790389 ATTATTTATGTTAAAAATTGACGCCGA 57.210 25.926 0.00 0.00 0.00 5.54
282 283 9.622004 TTATTTATGTTAAAAATTGACGCCGAA 57.378 25.926 0.00 0.00 0.00 4.30
283 284 6.914760 TTATGTTAAAAATTGACGCCGAAC 57.085 33.333 0.00 0.00 0.00 3.95
284 285 3.630101 TGTTAAAAATTGACGCCGAACC 58.370 40.909 0.00 0.00 0.00 3.62
285 286 3.066342 TGTTAAAAATTGACGCCGAACCA 59.934 39.130 0.00 0.00 0.00 3.67
286 287 2.128367 AAAAATTGACGCCGAACCAC 57.872 45.000 0.00 0.00 0.00 4.16
287 288 0.040781 AAAATTGACGCCGAACCACG 60.041 50.000 0.00 0.00 42.18 4.94
288 289 2.452366 AAATTGACGCCGAACCACGC 62.452 55.000 0.00 0.00 41.07 5.34
295 296 4.973055 CCGAACCACGCCGAACCA 62.973 66.667 0.00 0.00 41.07 3.67
296 297 2.968156 CGAACCACGCCGAACCAA 60.968 61.111 0.00 0.00 34.51 3.67
297 298 2.943653 GAACCACGCCGAACCAAG 59.056 61.111 0.00 0.00 0.00 3.61
298 299 3.249973 GAACCACGCCGAACCAAGC 62.250 63.158 0.00 0.00 0.00 4.01
302 303 4.612412 ACGCCGAACCAAGCCGAA 62.612 61.111 0.00 0.00 0.00 4.30
303 304 3.124921 CGCCGAACCAAGCCGAAT 61.125 61.111 0.00 0.00 0.00 3.34
304 305 1.812093 CGCCGAACCAAGCCGAATA 60.812 57.895 0.00 0.00 0.00 1.75
305 306 1.157870 CGCCGAACCAAGCCGAATAT 61.158 55.000 0.00 0.00 0.00 1.28
306 307 0.307760 GCCGAACCAAGCCGAATATG 59.692 55.000 0.00 0.00 0.00 1.78
307 308 1.663695 CCGAACCAAGCCGAATATGT 58.336 50.000 0.00 0.00 0.00 2.29
308 309 1.330521 CCGAACCAAGCCGAATATGTG 59.669 52.381 0.00 0.00 0.00 3.21
309 310 1.268032 CGAACCAAGCCGAATATGTGC 60.268 52.381 0.00 0.00 0.00 4.57
310 311 1.065551 GAACCAAGCCGAATATGTGCC 59.934 52.381 0.00 0.00 0.00 5.01
311 312 1.095228 ACCAAGCCGAATATGTGCCG 61.095 55.000 0.00 0.00 0.00 5.69
312 313 0.813610 CCAAGCCGAATATGTGCCGA 60.814 55.000 0.00 0.00 0.00 5.54
313 314 1.229428 CAAGCCGAATATGTGCCGAT 58.771 50.000 0.00 0.00 0.00 4.18
314 315 1.603802 CAAGCCGAATATGTGCCGATT 59.396 47.619 0.00 0.00 0.00 3.34
315 316 1.512926 AGCCGAATATGTGCCGATTC 58.487 50.000 0.00 0.00 0.00 2.52
317 318 3.639222 CGAATATGTGCCGATTCGC 57.361 52.632 0.00 0.00 45.41 4.70
318 319 0.858583 CGAATATGTGCCGATTCGCA 59.141 50.000 0.00 0.00 45.41 5.10
319 320 1.460743 CGAATATGTGCCGATTCGCAT 59.539 47.619 0.00 1.93 45.41 4.73
320 321 2.096268 CGAATATGTGCCGATTCGCATT 60.096 45.455 0.00 0.00 45.41 3.56
321 322 2.975410 ATATGTGCCGATTCGCATTG 57.025 45.000 0.00 0.00 41.70 2.82
322 323 1.946745 TATGTGCCGATTCGCATTGA 58.053 45.000 0.00 0.00 41.70 2.57
323 324 1.311859 ATGTGCCGATTCGCATTGAT 58.688 45.000 0.00 0.00 41.70 2.57
324 325 1.946745 TGTGCCGATTCGCATTGATA 58.053 45.000 0.00 0.00 41.70 2.15
325 326 2.493035 TGTGCCGATTCGCATTGATAT 58.507 42.857 0.00 0.00 41.70 1.63
326 327 2.480037 TGTGCCGATTCGCATTGATATC 59.520 45.455 0.00 0.00 41.70 1.63
327 328 1.726248 TGCCGATTCGCATTGATATCG 59.274 47.619 0.00 0.00 37.36 2.92
329 330 1.660607 CCGATTCGCATTGATATCGGG 59.339 52.381 18.82 7.51 44.74 5.14
330 331 1.061131 CGATTCGCATTGATATCGGGC 59.939 52.381 0.00 0.86 35.67 6.13
331 332 2.076100 GATTCGCATTGATATCGGGCA 58.924 47.619 11.89 0.00 0.00 5.36
332 333 2.183478 TTCGCATTGATATCGGGCAT 57.817 45.000 11.89 0.00 0.00 4.40
333 334 2.183478 TCGCATTGATATCGGGCATT 57.817 45.000 11.89 0.00 0.00 3.56
334 335 2.503331 TCGCATTGATATCGGGCATTT 58.497 42.857 11.89 0.00 0.00 2.32
335 336 2.884012 TCGCATTGATATCGGGCATTTT 59.116 40.909 11.89 0.00 0.00 1.82
336 337 3.317711 TCGCATTGATATCGGGCATTTTT 59.682 39.130 11.89 0.00 0.00 1.94
355 356 3.133946 GCCGAAAGTGGGCCAAAA 58.866 55.556 8.40 0.00 44.97 2.44
356 357 1.443828 GCCGAAAGTGGGCCAAAAA 59.556 52.632 8.40 0.00 44.97 1.94
417 418 3.546543 CCGCCCCAGAGCCGATTA 61.547 66.667 0.00 0.00 0.00 1.75
418 419 2.743718 CGCCCCAGAGCCGATTAT 59.256 61.111 0.00 0.00 0.00 1.28
419 420 1.541310 CCGCCCCAGAGCCGATTATA 61.541 60.000 0.00 0.00 0.00 0.98
420 421 0.389948 CGCCCCAGAGCCGATTATAC 60.390 60.000 0.00 0.00 0.00 1.47
421 422 0.036294 GCCCCAGAGCCGATTATACC 60.036 60.000 0.00 0.00 0.00 2.73
422 423 0.246635 CCCCAGAGCCGATTATACCG 59.753 60.000 0.00 0.00 0.00 4.02
423 424 0.389948 CCCAGAGCCGATTATACCGC 60.390 60.000 0.00 0.00 0.00 5.68
424 425 0.603569 CCAGAGCCGATTATACCGCT 59.396 55.000 0.00 0.00 0.00 5.52
425 426 1.670087 CCAGAGCCGATTATACCGCTG 60.670 57.143 0.00 0.00 0.00 5.18
426 427 0.603569 AGAGCCGATTATACCGCTGG 59.396 55.000 0.00 0.00 0.00 4.85
427 428 1.004918 AGCCGATTATACCGCTGGC 60.005 57.895 0.00 0.00 42.76 4.85
428 429 1.004918 GCCGATTATACCGCTGGCT 60.005 57.895 0.00 0.00 39.38 4.75
429 430 1.014564 GCCGATTATACCGCTGGCTC 61.015 60.000 0.00 0.00 39.38 4.70
430 431 0.317160 CCGATTATACCGCTGGCTCA 59.683 55.000 0.00 0.00 0.00 4.26
431 432 1.419374 CGATTATACCGCTGGCTCAC 58.581 55.000 0.00 0.00 0.00 3.51
432 433 1.797025 GATTATACCGCTGGCTCACC 58.203 55.000 0.00 0.00 0.00 4.02
433 434 0.396811 ATTATACCGCTGGCTCACCC 59.603 55.000 0.00 0.00 33.59 4.61
434 435 0.689745 TTATACCGCTGGCTCACCCT 60.690 55.000 0.00 0.00 33.59 4.34
435 436 1.113517 TATACCGCTGGCTCACCCTC 61.114 60.000 0.00 0.00 33.59 4.30
436 437 3.771531 TATACCGCTGGCTCACCCTCA 62.772 57.143 0.00 0.00 33.59 3.86
437 438 4.463879 CCGCTGGCTCACCCTCAG 62.464 72.222 0.00 0.00 33.59 3.35
438 439 4.463879 CGCTGGCTCACCCTCAGG 62.464 72.222 0.00 0.00 40.04 3.86
452 453 1.338020 CCTCAGGGGCGATTTTTATGC 59.662 52.381 0.00 0.00 0.00 3.14
458 459 2.781945 GGCGATTTTTATGCCTCCTG 57.218 50.000 0.00 0.00 45.40 3.86
459 460 2.297701 GGCGATTTTTATGCCTCCTGA 58.702 47.619 0.00 0.00 45.40 3.86
460 461 2.291741 GGCGATTTTTATGCCTCCTGAG 59.708 50.000 0.00 0.00 45.40 3.35
461 462 3.206150 GCGATTTTTATGCCTCCTGAGA 58.794 45.455 0.00 0.00 0.00 3.27
462 463 3.817647 GCGATTTTTATGCCTCCTGAGAT 59.182 43.478 0.00 0.00 0.00 2.75
463 464 4.320057 GCGATTTTTATGCCTCCTGAGATG 60.320 45.833 0.00 0.00 0.00 2.90
464 465 4.320057 CGATTTTTATGCCTCCTGAGATGC 60.320 45.833 0.00 0.00 34.50 3.91
465 466 2.645838 TTTATGCCTCCTGAGATGCC 57.354 50.000 0.00 0.00 33.08 4.40
466 467 1.510492 TTATGCCTCCTGAGATGCCA 58.490 50.000 0.00 0.00 33.08 4.92
467 468 1.510492 TATGCCTCCTGAGATGCCAA 58.490 50.000 0.00 0.00 33.08 4.52
468 469 0.851469 ATGCCTCCTGAGATGCCAAT 59.149 50.000 0.00 0.00 33.08 3.16
469 470 0.106868 TGCCTCCTGAGATGCCAATG 60.107 55.000 0.00 0.00 33.08 2.82
470 471 0.822532 GCCTCCTGAGATGCCAATGG 60.823 60.000 0.00 0.00 0.00 3.16
483 484 3.802862 CAATGGCTGGAGATGCTCT 57.197 52.632 0.00 0.00 0.00 4.09
484 485 2.054232 CAATGGCTGGAGATGCTCTT 57.946 50.000 0.00 0.00 0.00 2.85
485 486 3.204306 CAATGGCTGGAGATGCTCTTA 57.796 47.619 0.00 0.00 0.00 2.10
486 487 3.139850 CAATGGCTGGAGATGCTCTTAG 58.860 50.000 0.00 0.00 0.00 2.18
487 488 1.126488 TGGCTGGAGATGCTCTTAGG 58.874 55.000 0.00 0.00 0.00 2.69
488 489 0.396060 GGCTGGAGATGCTCTTAGGG 59.604 60.000 0.00 0.00 0.00 3.53
489 490 1.418334 GCTGGAGATGCTCTTAGGGA 58.582 55.000 0.00 0.00 0.00 4.20
490 491 1.765314 GCTGGAGATGCTCTTAGGGAA 59.235 52.381 0.00 0.00 0.00 3.97
491 492 2.224257 GCTGGAGATGCTCTTAGGGAAG 60.224 54.545 0.00 0.00 0.00 3.46
492 493 3.303938 CTGGAGATGCTCTTAGGGAAGA 58.696 50.000 0.00 0.00 39.47 2.87
493 494 3.708631 CTGGAGATGCTCTTAGGGAAGAA 59.291 47.826 0.00 0.00 41.23 2.52
494 495 3.708631 TGGAGATGCTCTTAGGGAAGAAG 59.291 47.826 0.00 0.00 41.23 2.85
495 496 3.964031 GGAGATGCTCTTAGGGAAGAAGA 59.036 47.826 0.00 0.00 41.23 2.87
497 498 3.966665 AGATGCTCTTAGGGAAGAAGAGG 59.033 47.826 12.89 0.00 46.71 3.69
498 499 2.472029 TGCTCTTAGGGAAGAAGAGGG 58.528 52.381 12.89 0.00 46.71 4.30
499 500 1.765904 GCTCTTAGGGAAGAAGAGGGG 59.234 57.143 12.89 0.00 46.71 4.79
500 501 2.403561 CTCTTAGGGAAGAAGAGGGGG 58.596 57.143 4.77 0.00 44.14 5.40
501 502 2.016096 TCTTAGGGAAGAAGAGGGGGA 58.984 52.381 0.00 0.00 38.80 4.81
502 503 2.120312 CTTAGGGAAGAAGAGGGGGAC 58.880 57.143 0.00 0.00 34.25 4.46
503 504 1.098589 TAGGGAAGAAGAGGGGGACA 58.901 55.000 0.00 0.00 0.00 4.02
504 505 0.423544 AGGGAAGAAGAGGGGGACAT 59.576 55.000 0.00 0.00 0.00 3.06
505 506 1.657162 AGGGAAGAAGAGGGGGACATA 59.343 52.381 0.00 0.00 0.00 2.29
506 507 2.254023 AGGGAAGAAGAGGGGGACATAT 59.746 50.000 0.00 0.00 0.00 1.78
507 508 2.640332 GGGAAGAAGAGGGGGACATATC 59.360 54.545 0.00 0.00 0.00 1.63
508 509 3.592865 GGAAGAAGAGGGGGACATATCT 58.407 50.000 0.00 0.00 0.00 1.98
509 510 4.450861 GGGAAGAAGAGGGGGACATATCTA 60.451 50.000 0.00 0.00 0.00 1.98
510 511 5.155905 GGAAGAAGAGGGGGACATATCTAA 58.844 45.833 0.00 0.00 0.00 2.10
511 512 5.012251 GGAAGAAGAGGGGGACATATCTAAC 59.988 48.000 0.00 0.00 0.00 2.34
512 513 4.153411 AGAAGAGGGGGACATATCTAACG 58.847 47.826 0.00 0.00 0.00 3.18
513 514 2.890814 AGAGGGGGACATATCTAACGG 58.109 52.381 0.00 0.00 0.00 4.44
514 515 1.275573 GAGGGGGACATATCTAACGGC 59.724 57.143 0.00 0.00 0.00 5.68
515 516 1.132817 AGGGGGACATATCTAACGGCT 60.133 52.381 0.00 0.00 0.00 5.52
516 517 1.002087 GGGGGACATATCTAACGGCTG 59.998 57.143 0.00 0.00 0.00 4.85
517 518 1.002087 GGGGACATATCTAACGGCTGG 59.998 57.143 0.00 0.00 0.00 4.85
518 519 1.968493 GGGACATATCTAACGGCTGGA 59.032 52.381 0.00 0.00 0.00 3.86
519 520 2.367567 GGGACATATCTAACGGCTGGAA 59.632 50.000 0.00 0.00 0.00 3.53
520 521 3.555168 GGGACATATCTAACGGCTGGAAG 60.555 52.174 0.00 0.00 0.00 3.46
521 522 3.321111 GGACATATCTAACGGCTGGAAGA 59.679 47.826 0.00 0.00 34.07 2.87
522 523 4.299978 GACATATCTAACGGCTGGAAGAC 58.700 47.826 0.00 0.00 40.17 3.01
530 531 2.533318 GGCTGGAAGACACGTCTTG 58.467 57.895 16.84 4.51 46.27 3.02
531 532 0.249911 GGCTGGAAGACACGTCTTGT 60.250 55.000 16.84 0.00 46.27 3.16
532 533 2.466654 GGCTGGAAGACACGTCTTGTG 61.467 57.143 16.84 7.81 46.27 3.33
539 540 2.250485 CACGTCTTGTGCTGCTGC 59.750 61.111 8.89 8.89 42.70 5.25
540 541 2.109799 ACGTCTTGTGCTGCTGCT 59.890 55.556 17.00 0.00 40.48 4.24
556 560 2.693069 CTGCTGGTGGAGAAAGTGTAG 58.307 52.381 0.00 0.00 33.10 2.74
647 654 4.210093 TTGACGTCGGCACCGTGT 62.210 61.111 11.62 9.07 38.92 4.49
650 657 4.640855 ACGTCGGCACCGTGTGAG 62.641 66.667 9.23 0.39 40.74 3.51
693 700 0.524862 CTGGTCAATGAGCTGTTGGC 59.475 55.000 13.84 0.00 42.19 4.52
695 702 1.503542 GTCAATGAGCTGTTGGCCG 59.496 57.895 0.00 0.00 43.05 6.13
696 703 2.180017 CAATGAGCTGTTGGCCGC 59.820 61.111 0.00 0.00 43.05 6.53
698 705 2.338015 AATGAGCTGTTGGCCGCAG 61.338 57.895 19.31 19.31 43.05 5.18
819 827 2.030401 CGCCGGTTCCGACAATCAA 61.030 57.895 13.08 0.00 0.00 2.57
820 828 1.570347 CGCCGGTTCCGACAATCAAA 61.570 55.000 13.08 0.00 0.00 2.69
824 832 1.401018 CGGTTCCGACAATCAAAAGGC 60.401 52.381 5.19 0.00 0.00 4.35
963 982 1.064946 GCCGTCCAGTCAGATCTCG 59.935 63.158 0.00 0.00 0.00 4.04
964 983 1.064946 CCGTCCAGTCAGATCTCGC 59.935 63.158 0.00 0.00 0.00 5.03
965 984 1.380403 CCGTCCAGTCAGATCTCGCT 61.380 60.000 0.00 0.00 0.00 4.93
966 985 0.453793 CGTCCAGTCAGATCTCGCTT 59.546 55.000 0.00 0.00 0.00 4.68
990 1013 0.253327 CTAGAAGCTTCCACCCACCC 59.747 60.000 22.81 0.00 0.00 4.61
1011 1034 4.899239 CGCGGGATGTCAGAGGGC 62.899 72.222 0.00 0.00 0.00 5.19
1473 1508 5.799213 ACTAGCTTATGGGAAGTGCATATC 58.201 41.667 0.00 0.00 0.00 1.63
1475 1510 2.160417 GCTTATGGGAAGTGCATATCGC 59.840 50.000 10.58 10.58 42.89 4.58
1479 1514 1.616374 TGGGAAGTGCATATCGCGATA 59.384 47.619 29.37 29.37 46.97 2.92
1485 1520 2.923655 AGTGCATATCGCGATATTTCGG 59.076 45.455 33.32 23.98 46.97 4.30
1489 1524 3.122948 GCATATCGCGATATTTCGGTGTT 59.877 43.478 33.32 12.41 45.59 3.32
1490 1525 4.325204 GCATATCGCGATATTTCGGTGTTA 59.675 41.667 33.32 10.35 45.59 2.41
1491 1526 5.164031 GCATATCGCGATATTTCGGTGTTAA 60.164 40.000 33.32 10.14 45.59 2.01
1492 1527 4.966850 ATCGCGATATTTCGGTGTTAAG 57.033 40.909 22.33 0.00 45.59 1.85
1493 1528 4.031418 TCGCGATATTTCGGTGTTAAGA 57.969 40.909 3.71 0.00 45.59 2.10
1494 1529 4.422840 TCGCGATATTTCGGTGTTAAGAA 58.577 39.130 3.71 0.00 45.59 2.52
1495 1530 4.863689 TCGCGATATTTCGGTGTTAAGAAA 59.136 37.500 3.71 0.00 45.59 2.52
1517 1552 0.905357 AGAACCGTGATAGCCAGCTT 59.095 50.000 0.00 0.00 0.00 3.74
1529 1564 1.280133 AGCCAGCTTGACATGCTAGAA 59.720 47.619 14.86 0.00 38.92 2.10
1557 1592 3.596214 AGTGGTGTATGTTTGATCGGAC 58.404 45.455 0.00 0.00 0.00 4.79
1573 1608 1.676006 CGGACCATTTGCTCCATAACC 59.324 52.381 0.00 0.00 0.00 2.85
1577 1612 3.953612 GACCATTTGCTCCATAACCATGA 59.046 43.478 0.00 0.00 33.67 3.07
1581 1616 3.370840 TTGCTCCATAACCATGAAGCT 57.629 42.857 0.00 0.00 42.67 3.74
1582 1617 2.646930 TGCTCCATAACCATGAAGCTG 58.353 47.619 0.00 0.00 42.67 4.24
1589 1624 6.632909 TCCATAACCATGAAGCTGATTTTTG 58.367 36.000 0.00 0.00 33.67 2.44
1590 1625 5.292589 CCATAACCATGAAGCTGATTTTTGC 59.707 40.000 0.00 0.00 33.67 3.68
1632 1671 4.444876 CGGAATTGGATATGTGGGAGACTT 60.445 45.833 0.00 0.00 0.00 3.01
1638 1677 3.392616 GGATATGTGGGAGACTTGGTGAT 59.607 47.826 0.00 0.00 0.00 3.06
1700 1739 3.756933 ACAATGTTCTGGCTTGCATTT 57.243 38.095 0.00 0.00 30.17 2.32
1704 1743 7.116075 ACAATGTTCTGGCTTGCATTTATAT 57.884 32.000 0.00 0.00 30.17 0.86
1712 1751 3.007182 GGCTTGCATTTATATGGTGCCAT 59.993 43.478 8.89 8.89 38.06 4.40
1753 1792 3.319122 GGCTTGATGTGGAAAAAGAGTGT 59.681 43.478 0.00 0.00 0.00 3.55
1798 1837 4.100373 AGCTCAAGGATCAGACCTTTAGT 58.900 43.478 0.00 0.00 46.61 2.24
1825 1864 9.450807 GCATTTTGACGTTAGCAATATAAAGAT 57.549 29.630 0.00 0.00 0.00 2.40
1854 1893 4.081752 CCTGATATGGAGGACTGAGCATAC 60.082 50.000 0.00 0.00 31.48 2.39
2068 2115 6.145371 GCCAATGTTACATGTTTTGTGGTTAG 59.855 38.462 2.30 0.00 39.48 2.34
2173 2221 7.170393 AGTCTTGGGTTATTTATTTCCTTGC 57.830 36.000 0.00 0.00 0.00 4.01
2348 2396 2.175715 AGAAGGAAAACCAGAAGCCACT 59.824 45.455 0.00 0.00 0.00 4.00
2619 2668 1.618837 GCTAGAAGGATATGGGACGCA 59.381 52.381 0.00 0.00 0.00 5.24
2700 2749 2.245159 TTCTGACTGCAGTTGACCTG 57.755 50.000 22.65 11.93 42.84 4.00
2749 2799 5.779529 ATGGCTGAATCCACAACATATTC 57.220 39.130 0.00 0.00 39.25 1.75
2773 2823 6.387041 AATGAATCATTGATGTGCCTGTAG 57.613 37.500 7.79 0.00 32.39 2.74
2881 3035 5.104527 TGGTTCCTTCTGTGGGATACTTATG 60.105 44.000 0.00 0.00 32.41 1.90
3033 3505 2.994849 TGTGCGCTACATGATAGTACG 58.005 47.619 9.73 0.00 33.42 3.67
3094 3566 3.245990 GTGAACTGATTTGCTGGTTTTGC 59.754 43.478 0.00 0.00 0.00 3.68
3543 4016 0.534203 TTGTTCTTCGGGCAGTGACC 60.534 55.000 4.30 4.30 0.00 4.02
3564 4037 5.965486 ACCAAGGTTCCTATTTCTTCCTTT 58.035 37.500 0.00 0.00 33.73 3.11
3693 4166 0.035458 AGCAGGCAGAGTACAACACC 59.965 55.000 0.00 0.00 0.00 4.16
3819 4292 1.296392 GCAAGGTGAAAATGGCCCC 59.704 57.895 0.00 0.00 0.00 5.80
3858 4331 9.336171 GAGATCCAGAAGCAGTTTAGAAATATT 57.664 33.333 0.00 0.00 0.00 1.28
3876 4349 9.740710 AGAAATATTAGGTATGTGCCTTAATCC 57.259 33.333 0.00 0.00 39.94 3.01
3900 4373 8.444783 TCCCTCTGCTTTAATTTATATTAGGCA 58.555 33.333 11.73 11.73 35.96 4.75
4021 4494 0.106268 TTCTTGGGCTTGGAACAGCA 60.106 50.000 0.00 0.00 42.39 4.41
4082 4555 5.069318 TGAATCAACAGGTATGCTGTTCAA 58.931 37.500 0.00 0.00 42.39 2.69
4093 4566 6.813152 AGGTATGCTGTTCAATTGCATTTTAC 59.187 34.615 0.00 0.00 43.85 2.01
4096 4569 4.202295 TGCTGTTCAATTGCATTTTACCCA 60.202 37.500 0.00 0.00 0.00 4.51
4100 4573 4.855715 TCAATTGCATTTTACCCACGAA 57.144 36.364 0.00 0.00 0.00 3.85
4116 4589 3.968096 CCACGAACGCTTTGCAATATATG 59.032 43.478 0.00 0.00 0.00 1.78
4117 4590 4.260579 CCACGAACGCTTTGCAATATATGA 60.261 41.667 0.00 0.00 0.00 2.15
4119 4592 3.894288 CGAACGCTTTGCAATATATGACG 59.106 43.478 0.00 0.00 0.00 4.35
4125 4684 7.507304 ACGCTTTGCAATATATGACGTAATAC 58.493 34.615 0.00 0.00 0.00 1.89
4140 4699 9.856488 ATGACGTAATACAAGGTATATGATGTC 57.144 33.333 0.00 0.00 32.88 3.06
4149 4708 7.220030 ACAAGGTATATGATGTCTGATTGGTC 58.780 38.462 0.00 0.00 0.00 4.02
4177 4736 6.803807 AGTAGTTTTCGACATACCGTCTTTAC 59.196 38.462 0.00 0.00 42.98 2.01
4199 4758 2.030717 ACGACACTAGCTCACAGTTCAG 60.031 50.000 0.00 0.00 0.00 3.02
4211 4838 3.076621 CACAGTTCAGGATGCTTTGCTA 58.923 45.455 0.00 0.00 34.76 3.49
4274 4902 8.571336 ACCTTTTGAGTTCATTTAGATGTTCAG 58.429 33.333 0.00 0.00 34.77 3.02
4278 4906 7.080353 TGAGTTCATTTAGATGTTCAGCATG 57.920 36.000 0.00 0.00 38.06 4.06
4289 4920 5.641209 AGATGTTCAGCATGTCTTGTCTAAC 59.359 40.000 0.00 0.00 38.06 2.34
4403 5034 6.998074 TCAAGTTTGTACATGAAACAGGATCT 59.002 34.615 10.66 0.00 36.03 2.75
4439 5070 9.468532 GAAATCATTAAACAACAGAGCTTTTCT 57.531 29.630 0.00 0.00 36.25 2.52
4487 5118 5.589452 ACCAAATGTGAAACCGTAAGTGTTA 59.411 36.000 0.00 0.00 34.36 2.41
4507 5138 1.261480 TCTCCTGCTCTTCAGTGGTC 58.739 55.000 0.00 0.00 41.25 4.02
4508 5139 0.248843 CTCCTGCTCTTCAGTGGTCC 59.751 60.000 0.00 0.00 41.25 4.46
4509 5140 0.471780 TCCTGCTCTTCAGTGGTCCA 60.472 55.000 0.00 0.00 41.25 4.02
4510 5141 0.036577 CCTGCTCTTCAGTGGTCCAG 60.037 60.000 0.00 0.00 41.25 3.86
4511 5142 0.683973 CTGCTCTTCAGTGGTCCAGT 59.316 55.000 0.00 0.00 38.02 4.00
4512 5143 1.895798 CTGCTCTTCAGTGGTCCAGTA 59.104 52.381 0.00 0.00 38.02 2.74
4513 5144 1.618837 TGCTCTTCAGTGGTCCAGTAC 59.381 52.381 0.00 0.00 0.00 2.73
4598 5229 7.044181 CAGGTATTCTGCAAAGATACAAGAGA 58.956 38.462 12.89 0.00 36.60 3.10
4614 5245 9.334693 GATACAAGAGAGCAAGTTGTTTTTATG 57.665 33.333 4.48 0.54 35.95 1.90
4616 5247 7.420800 ACAAGAGAGCAAGTTGTTTTTATGAG 58.579 34.615 4.48 0.00 30.07 2.90
4736 5370 4.142026 GCCAAACAAAGACAAGTTTACCCT 60.142 41.667 0.00 0.00 36.28 4.34
4739 5373 6.876789 CCAAACAAAGACAAGTTTACCCTTTT 59.123 34.615 0.00 0.00 36.28 2.27
4740 5374 7.389330 CCAAACAAAGACAAGTTTACCCTTTTT 59.611 33.333 0.00 0.00 36.28 1.94
4741 5375 8.440059 CAAACAAAGACAAGTTTACCCTTTTTC 58.560 33.333 0.00 0.00 36.28 2.29
4744 5378 8.033038 ACAAAGACAAGTTTACCCTTTTTCTTC 58.967 33.333 0.00 0.00 29.78 2.87
4766 5400 5.054477 TCTTCTTTCAGTTTTAGTGGGACG 58.946 41.667 0.00 0.00 0.00 4.79
4811 5445 8.858003 ATGTAGTGTAGACATTTTATCTGTCG 57.142 34.615 0.00 0.00 46.05 4.35
4812 5446 8.047413 TGTAGTGTAGACATTTTATCTGTCGA 57.953 34.615 0.00 0.00 46.05 4.20
4813 5447 8.517056 TGTAGTGTAGACATTTTATCTGTCGAA 58.483 33.333 0.00 0.00 46.05 3.71
4976 5611 3.367292 CCATTGTTCTTGGAAATGACGGG 60.367 47.826 0.00 0.00 36.26 5.28
5052 5708 5.869344 TGAAATGAGTTACAGAAGATGGTCG 59.131 40.000 0.00 0.00 0.00 4.79
5062 5718 5.001874 ACAGAAGATGGTCGCTACGATATA 58.998 41.667 0.00 0.00 38.42 0.86
5063 5719 5.472478 ACAGAAGATGGTCGCTACGATATAA 59.528 40.000 0.00 0.00 38.42 0.98
5097 5785 7.421087 AACTACTCCCTCTGTTCCTAAATAC 57.579 40.000 0.00 0.00 0.00 1.89
5101 5789 5.099042 TCCCTCTGTTCCTAAATACAAGC 57.901 43.478 0.00 0.00 0.00 4.01
5140 5828 8.950007 TCCAGTAATGTGTCTATATACATCCA 57.050 34.615 0.00 0.00 36.52 3.41
5141 5829 9.547279 TCCAGTAATGTGTCTATATACATCCAT 57.453 33.333 0.00 0.00 36.52 3.41
5193 5924 5.080969 TGTCTTGTATTAGAAACGGAGGG 57.919 43.478 0.00 0.00 0.00 4.30
5222 5977 5.755409 TGCTCCACTAGGTGAAAATCTTA 57.245 39.130 0.00 0.00 35.23 2.10
5234 5989 7.461749 AGGTGAAAATCTTATTGTCAGGAAGA 58.538 34.615 2.07 2.07 33.90 2.87
5235 5990 7.609532 AGGTGAAAATCTTATTGTCAGGAAGAG 59.390 37.037 5.16 0.00 32.94 2.85
5259 6019 0.784495 AGGTGAGAGGTCCTACCACA 59.216 55.000 19.21 4.67 41.95 4.17
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.928396 AGGTTGCCCGTAGCTGGT 60.928 61.111 0.00 0.00 44.23 4.00
1 2 2.436646 CAGGTTGCCCGTAGCTGG 60.437 66.667 0.00 0.00 44.23 4.85
2 3 2.436646 CCAGGTTGCCCGTAGCTG 60.437 66.667 0.00 0.00 44.23 4.24
3 4 2.606519 TCCAGGTTGCCCGTAGCT 60.607 61.111 0.00 0.00 44.23 3.32
4 5 2.436115 GTCCAGGTTGCCCGTAGC 60.436 66.667 0.00 0.00 44.14 3.58
5 6 1.079127 CAGTCCAGGTTGCCCGTAG 60.079 63.158 0.00 0.00 35.12 3.51
6 7 3.065306 CAGTCCAGGTTGCCCGTA 58.935 61.111 0.00 0.00 35.12 4.02
7 8 4.643387 GCAGTCCAGGTTGCCCGT 62.643 66.667 7.29 0.00 34.28 5.28
8 9 2.535485 TATGCAGTCCAGGTTGCCCG 62.535 60.000 13.83 0.00 39.54 6.13
9 10 1.032114 GTATGCAGTCCAGGTTGCCC 61.032 60.000 13.83 2.01 39.54 5.36
10 11 1.032114 GGTATGCAGTCCAGGTTGCC 61.032 60.000 13.83 2.09 39.54 4.52
11 12 0.035056 AGGTATGCAGTCCAGGTTGC 60.035 55.000 11.65 10.65 40.67 4.17
12 13 1.278985 TGAGGTATGCAGTCCAGGTTG 59.721 52.381 11.65 0.00 0.00 3.77
13 14 1.556911 CTGAGGTATGCAGTCCAGGTT 59.443 52.381 11.65 0.00 0.00 3.50
14 15 1.198713 CTGAGGTATGCAGTCCAGGT 58.801 55.000 11.65 0.00 0.00 4.00
15 16 1.198713 ACTGAGGTATGCAGTCCAGG 58.801 55.000 11.65 4.69 42.62 4.45
16 17 3.987547 CATACTGAGGTATGCAGTCCAG 58.012 50.000 11.65 7.52 45.56 3.86
25 26 4.207955 TCTTCTGACGCATACTGAGGTAT 58.792 43.478 0.00 0.00 39.02 2.73
26 27 3.617284 TCTTCTGACGCATACTGAGGTA 58.383 45.455 0.00 0.00 0.00 3.08
27 28 2.447443 TCTTCTGACGCATACTGAGGT 58.553 47.619 0.00 0.00 0.00 3.85
28 29 3.551863 GGATCTTCTGACGCATACTGAGG 60.552 52.174 0.00 0.00 0.00 3.86
29 30 3.637432 GGATCTTCTGACGCATACTGAG 58.363 50.000 0.00 0.00 0.00 3.35
30 31 2.033424 CGGATCTTCTGACGCATACTGA 59.967 50.000 0.00 0.00 0.00 3.41
31 32 2.033424 TCGGATCTTCTGACGCATACTG 59.967 50.000 0.00 0.00 0.00 2.74
32 33 2.292016 CTCGGATCTTCTGACGCATACT 59.708 50.000 0.00 0.00 0.00 2.12
33 34 2.290916 TCTCGGATCTTCTGACGCATAC 59.709 50.000 0.00 0.00 0.00 2.39
34 35 2.290916 GTCTCGGATCTTCTGACGCATA 59.709 50.000 0.00 0.00 0.00 3.14
35 36 1.066303 GTCTCGGATCTTCTGACGCAT 59.934 52.381 0.00 0.00 0.00 4.73
36 37 0.452184 GTCTCGGATCTTCTGACGCA 59.548 55.000 0.00 0.00 0.00 5.24
37 38 0.248702 GGTCTCGGATCTTCTGACGC 60.249 60.000 0.00 0.00 0.00 5.19
38 39 0.382515 GGGTCTCGGATCTTCTGACG 59.617 60.000 0.00 0.00 0.00 4.35
39 40 1.135333 GTGGGTCTCGGATCTTCTGAC 59.865 57.143 0.00 0.00 0.00 3.51
40 41 1.272480 TGTGGGTCTCGGATCTTCTGA 60.272 52.381 0.00 0.00 0.00 3.27
41 42 1.186200 TGTGGGTCTCGGATCTTCTG 58.814 55.000 0.00 0.00 0.00 3.02
42 43 1.759445 CATGTGGGTCTCGGATCTTCT 59.241 52.381 0.00 0.00 0.00 2.85
43 44 1.482593 ACATGTGGGTCTCGGATCTTC 59.517 52.381 0.00 0.00 0.00 2.87
44 45 1.208052 CACATGTGGGTCTCGGATCTT 59.792 52.381 18.51 0.00 0.00 2.40
45 46 0.826715 CACATGTGGGTCTCGGATCT 59.173 55.000 18.51 0.00 0.00 2.75
46 47 0.811616 GCACATGTGGGTCTCGGATC 60.812 60.000 26.55 2.60 0.00 3.36
47 48 1.221840 GCACATGTGGGTCTCGGAT 59.778 57.895 26.55 0.00 0.00 4.18
48 49 1.552799 ATGCACATGTGGGTCTCGGA 61.553 55.000 26.55 0.54 0.00 4.55
49 50 1.078214 ATGCACATGTGGGTCTCGG 60.078 57.895 26.55 0.00 0.00 4.63
50 51 0.391528 TGATGCACATGTGGGTCTCG 60.392 55.000 26.55 0.01 0.00 4.04
51 52 1.470098 GTTGATGCACATGTGGGTCTC 59.530 52.381 26.55 10.44 0.00 3.36
52 53 1.202915 TGTTGATGCACATGTGGGTCT 60.203 47.619 26.55 1.48 0.00 3.85
53 54 1.068333 GTGTTGATGCACATGTGGGTC 60.068 52.381 26.55 11.17 39.07 4.46
54 55 0.961019 GTGTTGATGCACATGTGGGT 59.039 50.000 26.55 0.00 39.07 4.51
55 56 0.244450 GGTGTTGATGCACATGTGGG 59.756 55.000 26.55 3.18 40.89 4.61
56 57 0.244450 GGGTGTTGATGCACATGTGG 59.756 55.000 26.55 9.24 40.89 4.17
57 58 0.109643 CGGGTGTTGATGCACATGTG 60.110 55.000 21.83 21.83 40.89 3.21
58 59 1.865788 GCGGGTGTTGATGCACATGT 61.866 55.000 0.00 0.00 40.89 3.21
59 60 1.153978 GCGGGTGTTGATGCACATG 60.154 57.895 0.00 0.00 40.89 3.21
60 61 1.588824 CTGCGGGTGTTGATGCACAT 61.589 55.000 0.00 0.00 40.89 3.21
61 62 2.203266 TGCGGGTGTTGATGCACA 60.203 55.556 0.00 0.00 40.89 4.57
62 63 2.562912 CTGCGGGTGTTGATGCAC 59.437 61.111 0.00 0.00 38.56 4.57
63 64 3.364441 GCTGCGGGTGTTGATGCA 61.364 61.111 0.00 0.00 35.75 3.96
64 65 3.332493 CTGCTGCGGGTGTTGATGC 62.332 63.158 0.00 0.00 0.00 3.91
65 66 1.236616 TTCTGCTGCGGGTGTTGATG 61.237 55.000 8.89 0.00 0.00 3.07
66 67 0.322816 ATTCTGCTGCGGGTGTTGAT 60.323 50.000 8.89 0.00 0.00 2.57
67 68 0.955428 GATTCTGCTGCGGGTGTTGA 60.955 55.000 8.89 0.00 0.00 3.18
68 69 0.957395 AGATTCTGCTGCGGGTGTTG 60.957 55.000 8.89 0.00 0.00 3.33
69 70 0.957395 CAGATTCTGCTGCGGGTGTT 60.957 55.000 8.89 0.00 0.00 3.32
70 71 1.376424 CAGATTCTGCTGCGGGTGT 60.376 57.895 8.89 0.00 0.00 4.16
71 72 2.110967 CCAGATTCTGCTGCGGGTG 61.111 63.158 8.89 1.79 34.56 4.61
72 73 2.270205 CCAGATTCTGCTGCGGGT 59.730 61.111 8.89 0.00 34.56 5.28
73 74 2.110967 CACCAGATTCTGCTGCGGG 61.111 63.158 8.89 0.00 34.56 6.13
74 75 2.110967 CCACCAGATTCTGCTGCGG 61.111 63.158 8.23 0.95 34.56 5.69
75 76 1.078918 TCCACCAGATTCTGCTGCG 60.079 57.895 8.23 0.00 34.56 5.18
76 77 1.375098 GCTCCACCAGATTCTGCTGC 61.375 60.000 8.23 0.00 34.56 5.25
77 78 0.035725 TGCTCCACCAGATTCTGCTG 60.036 55.000 8.23 5.13 35.66 4.41
78 79 0.035630 GTGCTCCACCAGATTCTGCT 60.036 55.000 8.23 0.00 0.00 4.24
79 80 2.475666 GTGCTCCACCAGATTCTGC 58.524 57.895 8.23 0.00 0.00 4.26
89 90 1.346068 GATCCTCCATAGGTGCTCCAC 59.654 57.143 7.70 0.00 44.09 4.02
90 91 1.062198 TGATCCTCCATAGGTGCTCCA 60.062 52.381 7.70 0.00 44.09 3.86
91 92 1.722034 TGATCCTCCATAGGTGCTCC 58.278 55.000 0.00 0.00 44.09 4.70
92 93 2.038295 CCTTGATCCTCCATAGGTGCTC 59.962 54.545 0.00 0.00 44.09 4.26
93 94 2.053244 CCTTGATCCTCCATAGGTGCT 58.947 52.381 0.00 0.00 44.09 4.40
94 95 1.072965 CCCTTGATCCTCCATAGGTGC 59.927 57.143 0.00 0.00 44.09 5.01
95 96 1.072965 GCCCTTGATCCTCCATAGGTG 59.927 57.143 0.00 0.00 44.09 4.00
96 97 1.439543 GCCCTTGATCCTCCATAGGT 58.560 55.000 0.00 0.00 44.09 3.08
97 98 0.322975 CGCCCTTGATCCTCCATAGG 59.677 60.000 0.00 0.00 45.21 2.57
98 99 1.001406 GTCGCCCTTGATCCTCCATAG 59.999 57.143 0.00 0.00 0.00 2.23
99 100 1.048601 GTCGCCCTTGATCCTCCATA 58.951 55.000 0.00 0.00 0.00 2.74
100 101 1.832912 GTCGCCCTTGATCCTCCAT 59.167 57.895 0.00 0.00 0.00 3.41
101 102 2.721167 CGTCGCCCTTGATCCTCCA 61.721 63.158 0.00 0.00 0.00 3.86
102 103 2.107141 CGTCGCCCTTGATCCTCC 59.893 66.667 0.00 0.00 0.00 4.30
103 104 2.586357 GCGTCGCCCTTGATCCTC 60.586 66.667 5.75 0.00 0.00 3.71
104 105 4.162690 GGCGTCGCCCTTGATCCT 62.163 66.667 26.23 0.00 44.06 3.24
119 120 3.471244 ATCACGCGTCGAGCTAGGC 62.471 63.158 9.86 0.00 45.59 3.93
120 121 1.655654 CATCACGCGTCGAGCTAGG 60.656 63.158 9.86 0.00 45.59 3.02
121 122 0.040870 ATCATCACGCGTCGAGCTAG 60.041 55.000 9.86 0.00 45.59 3.42
122 123 1.223187 TATCATCACGCGTCGAGCTA 58.777 50.000 9.86 0.00 45.59 3.32
123 124 0.593618 ATATCATCACGCGTCGAGCT 59.406 50.000 9.86 0.00 45.59 4.09
124 125 0.705094 CATATCATCACGCGTCGAGC 59.295 55.000 9.86 0.00 43.95 5.03
125 126 2.237526 CTCATATCATCACGCGTCGAG 58.762 52.381 9.86 1.07 0.00 4.04
126 127 1.602377 ACTCATATCATCACGCGTCGA 59.398 47.619 9.86 11.59 0.00 4.20
127 128 2.037941 ACTCATATCATCACGCGTCG 57.962 50.000 9.86 5.44 0.00 5.12
128 129 4.778842 AAAACTCATATCATCACGCGTC 57.221 40.909 9.86 0.00 0.00 5.19
129 130 6.844696 ATAAAAACTCATATCATCACGCGT 57.155 33.333 5.58 5.58 0.00 6.01
130 131 7.639850 ACAAATAAAAACTCATATCATCACGCG 59.360 33.333 3.53 3.53 0.00 6.01
131 132 8.841444 ACAAATAAAAACTCATATCATCACGC 57.159 30.769 0.00 0.00 0.00 5.34
184 185 9.482627 AGTTCAACAAAATAGTTCAACAACAAA 57.517 25.926 0.00 0.00 35.30 2.83
218 219 9.288576 ACAGTTCATCACAGAAAATCAATAGAA 57.711 29.630 0.00 0.00 0.00 2.10
219 220 8.724229 CACAGTTCATCACAGAAAATCAATAGA 58.276 33.333 0.00 0.00 0.00 1.98
220 221 8.509690 ACACAGTTCATCACAGAAAATCAATAG 58.490 33.333 0.00 0.00 0.00 1.73
221 222 8.291740 CACACAGTTCATCACAGAAAATCAATA 58.708 33.333 0.00 0.00 0.00 1.90
222 223 7.013559 TCACACAGTTCATCACAGAAAATCAAT 59.986 33.333 0.00 0.00 0.00 2.57
223 224 6.318396 TCACACAGTTCATCACAGAAAATCAA 59.682 34.615 0.00 0.00 0.00 2.57
224 225 5.821995 TCACACAGTTCATCACAGAAAATCA 59.178 36.000 0.00 0.00 0.00 2.57
225 226 6.304356 TCACACAGTTCATCACAGAAAATC 57.696 37.500 0.00 0.00 0.00 2.17
226 227 6.889301 ATCACACAGTTCATCACAGAAAAT 57.111 33.333 0.00 0.00 0.00 1.82
227 228 7.800155 TTATCACACAGTTCATCACAGAAAA 57.200 32.000 0.00 0.00 0.00 2.29
228 229 7.800155 TTTATCACACAGTTCATCACAGAAA 57.200 32.000 0.00 0.00 0.00 2.52
229 230 7.800155 TTTTATCACACAGTTCATCACAGAA 57.200 32.000 0.00 0.00 0.00 3.02
230 231 7.800155 TTTTTATCACACAGTTCATCACAGA 57.200 32.000 0.00 0.00 0.00 3.41
255 256 9.790389 TCGGCGTCAATTTTTAACATAAATAAT 57.210 25.926 6.85 0.00 0.00 1.28
256 257 9.622004 TTCGGCGTCAATTTTTAACATAAATAA 57.378 25.926 6.85 0.00 0.00 1.40
257 258 9.063739 GTTCGGCGTCAATTTTTAACATAAATA 57.936 29.630 6.85 0.00 0.00 1.40
258 259 7.062488 GGTTCGGCGTCAATTTTTAACATAAAT 59.938 33.333 6.85 0.00 0.00 1.40
259 260 6.362820 GGTTCGGCGTCAATTTTTAACATAAA 59.637 34.615 6.85 0.00 0.00 1.40
260 261 5.857517 GGTTCGGCGTCAATTTTTAACATAA 59.142 36.000 6.85 0.00 0.00 1.90
261 262 5.048921 TGGTTCGGCGTCAATTTTTAACATA 60.049 36.000 6.85 0.00 0.00 2.29
262 263 4.231439 GGTTCGGCGTCAATTTTTAACAT 58.769 39.130 6.85 0.00 0.00 2.71
263 264 3.066342 TGGTTCGGCGTCAATTTTTAACA 59.934 39.130 6.85 0.00 0.00 2.41
264 265 3.422876 GTGGTTCGGCGTCAATTTTTAAC 59.577 43.478 6.85 0.00 0.00 2.01
265 266 3.630101 GTGGTTCGGCGTCAATTTTTAA 58.370 40.909 6.85 0.00 0.00 1.52
266 267 2.349627 CGTGGTTCGGCGTCAATTTTTA 60.350 45.455 6.85 0.00 35.71 1.52
267 268 1.598430 CGTGGTTCGGCGTCAATTTTT 60.598 47.619 6.85 0.00 35.71 1.94
268 269 0.040781 CGTGGTTCGGCGTCAATTTT 60.041 50.000 6.85 0.00 35.71 1.82
269 270 1.572447 CGTGGTTCGGCGTCAATTT 59.428 52.632 6.85 0.00 35.71 1.82
270 271 2.961669 GCGTGGTTCGGCGTCAATT 61.962 57.895 6.85 0.00 40.26 2.32
271 272 3.419759 GCGTGGTTCGGCGTCAAT 61.420 61.111 6.85 0.00 40.26 2.57
278 279 4.973055 TGGTTCGGCGTGGTTCGG 62.973 66.667 6.85 0.00 40.26 4.30
279 280 2.950172 CTTGGTTCGGCGTGGTTCG 61.950 63.158 6.85 0.00 43.12 3.95
280 281 2.943653 CTTGGTTCGGCGTGGTTC 59.056 61.111 6.85 0.00 0.00 3.62
281 282 3.284449 GCTTGGTTCGGCGTGGTT 61.284 61.111 6.85 0.00 0.00 3.67
287 288 0.307760 CATATTCGGCTTGGTTCGGC 59.692 55.000 0.00 0.00 0.00 5.54
288 289 1.330521 CACATATTCGGCTTGGTTCGG 59.669 52.381 0.00 0.00 0.00 4.30
289 290 1.268032 GCACATATTCGGCTTGGTTCG 60.268 52.381 0.00 0.00 0.00 3.95
290 291 1.065551 GGCACATATTCGGCTTGGTTC 59.934 52.381 0.00 0.00 0.00 3.62
291 292 1.102978 GGCACATATTCGGCTTGGTT 58.897 50.000 0.00 0.00 0.00 3.67
292 293 1.095228 CGGCACATATTCGGCTTGGT 61.095 55.000 0.00 0.00 0.00 3.67
293 294 0.813610 TCGGCACATATTCGGCTTGG 60.814 55.000 0.00 0.00 0.00 3.61
294 295 1.229428 ATCGGCACATATTCGGCTTG 58.771 50.000 0.00 0.00 0.00 4.01
295 296 1.873591 GAATCGGCACATATTCGGCTT 59.126 47.619 0.00 0.00 0.00 4.35
296 297 1.512926 GAATCGGCACATATTCGGCT 58.487 50.000 0.00 0.00 0.00 5.52
297 298 0.163788 CGAATCGGCACATATTCGGC 59.836 55.000 9.05 0.00 44.65 5.54
298 299 0.163788 GCGAATCGGCACATATTCGG 59.836 55.000 16.40 2.44 46.80 4.30
308 309 2.425989 CGATATCAATGCGAATCGGC 57.574 50.000 4.35 0.00 38.01 5.54
310 311 1.061131 GCCCGATATCAATGCGAATCG 59.939 52.381 3.12 0.00 40.60 3.34
311 312 2.076100 TGCCCGATATCAATGCGAATC 58.924 47.619 3.12 0.00 0.00 2.52
312 313 2.183478 TGCCCGATATCAATGCGAAT 57.817 45.000 3.12 0.00 0.00 3.34
313 314 2.183478 ATGCCCGATATCAATGCGAA 57.817 45.000 3.12 0.00 0.00 4.70
314 315 2.183478 AATGCCCGATATCAATGCGA 57.817 45.000 3.12 0.00 0.00 5.10
315 316 2.995466 AAATGCCCGATATCAATGCG 57.005 45.000 3.12 0.00 0.00 4.73
333 334 4.320676 TTTGGCCCACTTTCGGCAAAAA 62.321 45.455 0.00 0.00 44.59 1.94
338 339 1.443828 TTTTTGGCCCACTTTCGGC 59.556 52.632 0.00 0.00 46.29 5.54
402 403 0.036294 GGTATAATCGGCTCTGGGGC 60.036 60.000 0.00 0.00 37.12 5.80
403 404 0.246635 CGGTATAATCGGCTCTGGGG 59.753 60.000 0.00 0.00 0.00 4.96
404 405 0.389948 GCGGTATAATCGGCTCTGGG 60.390 60.000 0.00 0.00 0.00 4.45
405 406 0.603569 AGCGGTATAATCGGCTCTGG 59.396 55.000 0.00 0.00 39.19 3.86
406 407 1.670087 CCAGCGGTATAATCGGCTCTG 60.670 57.143 0.00 0.00 40.92 3.35
407 408 0.603569 CCAGCGGTATAATCGGCTCT 59.396 55.000 0.00 0.00 40.92 4.09
408 409 1.014564 GCCAGCGGTATAATCGGCTC 61.015 60.000 4.31 0.00 40.92 4.70
409 410 1.004918 GCCAGCGGTATAATCGGCT 60.005 57.895 4.31 0.00 42.99 5.52
410 411 1.004918 AGCCAGCGGTATAATCGGC 60.005 57.895 3.38 3.38 39.90 5.54
411 412 0.317160 TGAGCCAGCGGTATAATCGG 59.683 55.000 0.00 0.00 0.00 4.18
412 413 1.419374 GTGAGCCAGCGGTATAATCG 58.581 55.000 0.00 0.00 0.00 3.34
413 414 1.608283 GGGTGAGCCAGCGGTATAATC 60.608 57.143 0.00 0.00 36.17 1.75
414 415 0.396811 GGGTGAGCCAGCGGTATAAT 59.603 55.000 0.00 0.00 36.17 1.28
415 416 0.689745 AGGGTGAGCCAGCGGTATAA 60.690 55.000 2.50 0.00 36.17 0.98
416 417 1.075525 AGGGTGAGCCAGCGGTATA 60.076 57.895 2.50 0.00 36.17 1.47
417 418 2.365635 AGGGTGAGCCAGCGGTAT 60.366 61.111 2.50 0.00 36.17 2.73
418 419 3.075005 GAGGGTGAGCCAGCGGTA 61.075 66.667 2.50 0.00 36.17 4.02
420 421 4.463879 CTGAGGGTGAGCCAGCGG 62.464 72.222 2.50 0.00 36.17 5.52
421 422 4.463879 CCTGAGGGTGAGCCAGCG 62.464 72.222 2.50 0.00 36.17 5.18
422 423 4.106925 CCCTGAGGGTGAGCCAGC 62.107 72.222 10.09 0.00 38.25 4.85
432 433 1.338020 GCATAAAAATCGCCCCTGAGG 59.662 52.381 0.00 0.00 39.47 3.86
433 434 1.338020 GGCATAAAAATCGCCCCTGAG 59.662 52.381 0.00 0.00 40.07 3.35
434 435 1.398692 GGCATAAAAATCGCCCCTGA 58.601 50.000 0.00 0.00 40.07 3.86
435 436 3.965780 GGCATAAAAATCGCCCCTG 57.034 52.632 0.00 0.00 40.07 4.45
439 440 2.291741 CTCAGGAGGCATAAAAATCGCC 59.708 50.000 0.00 0.00 46.62 5.54
440 441 3.206150 TCTCAGGAGGCATAAAAATCGC 58.794 45.455 0.00 0.00 0.00 4.58
441 442 4.320057 GCATCTCAGGAGGCATAAAAATCG 60.320 45.833 0.00 0.00 46.88 3.34
442 443 5.118642 GCATCTCAGGAGGCATAAAAATC 57.881 43.478 0.00 0.00 46.88 2.17
451 452 0.822532 CCATTGGCATCTCAGGAGGC 60.823 60.000 0.00 0.00 46.94 4.70
452 453 3.416253 CCATTGGCATCTCAGGAGG 57.584 57.895 0.00 0.00 0.00 4.30
476 477 3.070878 CCCTCTTCTTCCCTAAGAGCATC 59.929 52.174 7.22 0.00 45.67 3.91
477 478 3.044894 CCCTCTTCTTCCCTAAGAGCAT 58.955 50.000 7.22 0.00 45.67 3.79
478 479 2.472029 CCCTCTTCTTCCCTAAGAGCA 58.528 52.381 7.22 0.00 45.67 4.26
479 480 1.765904 CCCCTCTTCTTCCCTAAGAGC 59.234 57.143 7.22 0.00 45.67 4.09
480 481 2.022918 TCCCCCTCTTCTTCCCTAAGAG 60.023 54.545 5.97 5.97 46.29 2.85
481 482 2.016096 TCCCCCTCTTCTTCCCTAAGA 58.984 52.381 0.00 0.00 40.03 2.10
482 483 2.120312 GTCCCCCTCTTCTTCCCTAAG 58.880 57.143 0.00 0.00 0.00 2.18
483 484 1.439543 TGTCCCCCTCTTCTTCCCTAA 59.560 52.381 0.00 0.00 0.00 2.69
484 485 1.098589 TGTCCCCCTCTTCTTCCCTA 58.901 55.000 0.00 0.00 0.00 3.53
485 486 0.423544 ATGTCCCCCTCTTCTTCCCT 59.576 55.000 0.00 0.00 0.00 4.20
486 487 2.191981 TATGTCCCCCTCTTCTTCCC 57.808 55.000 0.00 0.00 0.00 3.97
487 488 3.592865 AGATATGTCCCCCTCTTCTTCC 58.407 50.000 0.00 0.00 0.00 3.46
488 489 5.279056 CGTTAGATATGTCCCCCTCTTCTTC 60.279 48.000 0.00 0.00 0.00 2.87
489 490 4.589374 CGTTAGATATGTCCCCCTCTTCTT 59.411 45.833 0.00 0.00 0.00 2.52
490 491 4.153411 CGTTAGATATGTCCCCCTCTTCT 58.847 47.826 0.00 0.00 0.00 2.85
491 492 3.258622 CCGTTAGATATGTCCCCCTCTTC 59.741 52.174 0.00 0.00 0.00 2.87
492 493 3.240302 CCGTTAGATATGTCCCCCTCTT 58.760 50.000 0.00 0.00 0.00 2.85
493 494 2.890814 CCGTTAGATATGTCCCCCTCT 58.109 52.381 0.00 0.00 0.00 3.69
494 495 1.275573 GCCGTTAGATATGTCCCCCTC 59.724 57.143 0.00 0.00 0.00 4.30
495 496 1.132817 AGCCGTTAGATATGTCCCCCT 60.133 52.381 0.00 0.00 0.00 4.79
496 497 1.002087 CAGCCGTTAGATATGTCCCCC 59.998 57.143 0.00 0.00 0.00 5.40
497 498 1.002087 CCAGCCGTTAGATATGTCCCC 59.998 57.143 0.00 0.00 0.00 4.81
498 499 1.968493 TCCAGCCGTTAGATATGTCCC 59.032 52.381 0.00 0.00 0.00 4.46
499 500 3.321111 TCTTCCAGCCGTTAGATATGTCC 59.679 47.826 0.00 0.00 0.00 4.02
500 501 4.202121 TGTCTTCCAGCCGTTAGATATGTC 60.202 45.833 0.00 0.00 0.00 3.06
501 502 3.704566 TGTCTTCCAGCCGTTAGATATGT 59.295 43.478 0.00 0.00 0.00 2.29
502 503 4.051922 GTGTCTTCCAGCCGTTAGATATG 58.948 47.826 0.00 0.00 0.00 1.78
503 504 3.243434 CGTGTCTTCCAGCCGTTAGATAT 60.243 47.826 0.00 0.00 0.00 1.63
504 505 2.098607 CGTGTCTTCCAGCCGTTAGATA 59.901 50.000 0.00 0.00 0.00 1.98
505 506 1.135083 CGTGTCTTCCAGCCGTTAGAT 60.135 52.381 0.00 0.00 0.00 1.98
506 507 0.242825 CGTGTCTTCCAGCCGTTAGA 59.757 55.000 0.00 0.00 0.00 2.10
507 508 0.038526 ACGTGTCTTCCAGCCGTTAG 60.039 55.000 0.00 0.00 0.00 2.34
508 509 0.038892 GACGTGTCTTCCAGCCGTTA 60.039 55.000 0.00 0.00 0.00 3.18
509 510 1.300697 GACGTGTCTTCCAGCCGTT 60.301 57.895 0.00 0.00 0.00 4.44
510 511 1.745320 AAGACGTGTCTTCCAGCCGT 61.745 55.000 9.40 0.00 46.13 5.68
511 512 1.006102 AAGACGTGTCTTCCAGCCG 60.006 57.895 9.40 0.00 46.13 5.52
512 513 0.249911 ACAAGACGTGTCTTCCAGCC 60.250 55.000 12.15 0.00 46.13 4.85
513 514 0.861837 CACAAGACGTGTCTTCCAGC 59.138 55.000 12.15 0.00 46.13 4.85
514 515 0.861837 GCACAAGACGTGTCTTCCAG 59.138 55.000 12.15 4.89 46.13 3.86
515 516 0.464036 AGCACAAGACGTGTCTTCCA 59.536 50.000 12.15 0.00 46.13 3.53
516 517 0.861837 CAGCACAAGACGTGTCTTCC 59.138 55.000 12.15 4.75 46.13 3.46
517 518 0.233332 GCAGCACAAGACGTGTCTTC 59.767 55.000 12.15 2.49 46.13 2.87
523 524 2.109799 AGCAGCAGCACAAGACGT 59.890 55.556 3.17 0.00 45.49 4.34
524 525 2.554775 CAGCAGCAGCACAAGACG 59.445 61.111 3.17 0.00 45.49 4.18
525 526 1.895707 ACCAGCAGCAGCACAAGAC 60.896 57.895 3.17 0.00 45.49 3.01
526 527 1.895231 CACCAGCAGCAGCACAAGA 60.895 57.895 3.17 0.00 45.49 3.02
527 528 2.643272 CACCAGCAGCAGCACAAG 59.357 61.111 3.17 0.00 45.49 3.16
528 529 2.908428 CCACCAGCAGCAGCACAA 60.908 61.111 3.17 0.00 45.49 3.33
529 530 3.837570 CTCCACCAGCAGCAGCACA 62.838 63.158 3.17 0.00 45.49 4.57
530 531 3.054503 CTCCACCAGCAGCAGCAC 61.055 66.667 3.17 0.00 45.49 4.40
531 532 2.342073 TTTCTCCACCAGCAGCAGCA 62.342 55.000 3.17 0.00 45.49 4.41
532 533 1.584380 CTTTCTCCACCAGCAGCAGC 61.584 60.000 0.00 0.00 42.56 5.25
533 534 0.250640 ACTTTCTCCACCAGCAGCAG 60.251 55.000 0.00 0.00 0.00 4.24
534 535 0.535780 CACTTTCTCCACCAGCAGCA 60.536 55.000 0.00 0.00 0.00 4.41
535 536 0.536006 ACACTTTCTCCACCAGCAGC 60.536 55.000 0.00 0.00 0.00 5.25
536 537 2.300152 TCTACACTTTCTCCACCAGCAG 59.700 50.000 0.00 0.00 0.00 4.24
537 538 2.300152 CTCTACACTTTCTCCACCAGCA 59.700 50.000 0.00 0.00 0.00 4.41
538 539 2.354203 CCTCTACACTTTCTCCACCAGC 60.354 54.545 0.00 0.00 0.00 4.85
539 540 2.900546 ACCTCTACACTTTCTCCACCAG 59.099 50.000 0.00 0.00 0.00 4.00
540 541 2.972348 ACCTCTACACTTTCTCCACCA 58.028 47.619 0.00 0.00 0.00 4.17
556 560 2.946990 CTCTCCTTCGTTCCTCTACCTC 59.053 54.545 0.00 0.00 0.00 3.85
629 635 3.403057 CACGGTGCCGACGTCAAG 61.403 66.667 18.16 7.32 43.58 3.02
647 654 4.043750 CACGACACGTTAACTAAACCTCA 58.956 43.478 3.71 0.00 38.32 3.86
650 657 2.408865 CGCACGACACGTTAACTAAACC 60.409 50.000 3.71 0.00 38.32 3.27
758 766 4.065281 GACGGCGTGTGTAGGGCT 62.065 66.667 21.19 0.00 35.36 5.19
782 790 2.637715 GATGCTGCGCACGGAATGAC 62.638 60.000 5.66 0.00 43.04 3.06
819 827 0.953960 CGTGCCTCGGTTTAGCCTTT 60.954 55.000 0.00 0.00 35.71 3.11
820 828 1.375523 CGTGCCTCGGTTTAGCCTT 60.376 57.895 0.00 0.00 35.71 4.35
824 832 2.726691 CGTGCGTGCCTCGGTTTAG 61.727 63.158 0.99 0.00 40.26 1.85
919 932 2.225727 GAGGAATTTTCTCGCCGTGTTT 59.774 45.455 0.00 0.00 0.00 2.83
951 967 1.925847 GAAGCAAGCGAGATCTGACTG 59.074 52.381 0.00 0.00 0.00 3.51
952 968 1.824230 AGAAGCAAGCGAGATCTGACT 59.176 47.619 0.00 0.00 0.00 3.41
1181 1207 4.760047 CACGAGACCAAGGGCGGG 62.760 72.222 0.00 0.00 0.00 6.13
1256 1285 4.072088 GCCCTGACGAAACACGCG 62.072 66.667 3.53 3.53 46.94 6.01
1479 1514 7.173735 ACGGTTCTTATTTCTTAACACCGAAAT 59.826 33.333 13.95 5.90 40.73 2.17
1485 1520 8.114905 GCTATCACGGTTCTTATTTCTTAACAC 58.885 37.037 0.00 0.00 0.00 3.32
1489 1524 6.880484 TGGCTATCACGGTTCTTATTTCTTA 58.120 36.000 0.00 0.00 0.00 2.10
1490 1525 5.741011 TGGCTATCACGGTTCTTATTTCTT 58.259 37.500 0.00 0.00 0.00 2.52
1491 1526 5.353394 TGGCTATCACGGTTCTTATTTCT 57.647 39.130 0.00 0.00 0.00 2.52
1492 1527 4.024809 GCTGGCTATCACGGTTCTTATTTC 60.025 45.833 0.00 0.00 0.00 2.17
1493 1528 3.877508 GCTGGCTATCACGGTTCTTATTT 59.122 43.478 0.00 0.00 0.00 1.40
1494 1529 3.134804 AGCTGGCTATCACGGTTCTTATT 59.865 43.478 0.00 0.00 0.00 1.40
1495 1530 2.700897 AGCTGGCTATCACGGTTCTTAT 59.299 45.455 0.00 0.00 0.00 1.73
1503 1538 1.596260 CATGTCAAGCTGGCTATCACG 59.404 52.381 0.00 0.00 0.00 4.35
1517 1552 6.986231 CACCACTACATAATTCTAGCATGTCA 59.014 38.462 0.00 0.00 34.78 3.58
1529 1564 7.441157 CCGATCAAACATACACCACTACATAAT 59.559 37.037 0.00 0.00 0.00 1.28
1557 1592 4.940463 CTTCATGGTTATGGAGCAAATGG 58.060 43.478 0.00 0.00 39.57 3.16
1573 1608 2.597305 GAGCGCAAAAATCAGCTTCATG 59.403 45.455 11.47 0.00 40.39 3.07
1577 1612 1.668047 GCAGAGCGCAAAAATCAGCTT 60.668 47.619 11.47 0.00 40.39 3.74
1581 1616 4.168014 CAAATAGCAGAGCGCAAAAATCA 58.832 39.130 11.47 0.00 46.13 2.57
1582 1617 4.030977 CACAAATAGCAGAGCGCAAAAATC 59.969 41.667 11.47 0.00 46.13 2.17
1589 1624 2.534939 CGTTACACAAATAGCAGAGCGC 60.535 50.000 0.00 0.00 42.91 5.92
1590 1625 2.029244 CCGTTACACAAATAGCAGAGCG 59.971 50.000 0.00 0.00 0.00 5.03
1651 1690 4.910458 AAAGTGCAGTAACCTAGTGGAT 57.090 40.909 0.00 0.00 37.04 3.41
1718 1757 4.033358 CACATCAAGCCTAATCAAGACGTC 59.967 45.833 7.70 7.70 0.00 4.34
1719 1758 3.935203 CACATCAAGCCTAATCAAGACGT 59.065 43.478 0.00 0.00 0.00 4.34
1720 1759 3.310774 CCACATCAAGCCTAATCAAGACG 59.689 47.826 0.00 0.00 0.00 4.18
1721 1760 4.517285 TCCACATCAAGCCTAATCAAGAC 58.483 43.478 0.00 0.00 0.00 3.01
1722 1761 4.842531 TCCACATCAAGCCTAATCAAGA 57.157 40.909 0.00 0.00 0.00 3.02
1723 1762 5.902613 TTTCCACATCAAGCCTAATCAAG 57.097 39.130 0.00 0.00 0.00 3.02
1724 1763 6.493115 TCTTTTTCCACATCAAGCCTAATCAA 59.507 34.615 0.00 0.00 0.00 2.57
1725 1764 6.009589 TCTTTTTCCACATCAAGCCTAATCA 58.990 36.000 0.00 0.00 0.00 2.57
1726 1765 6.151817 ACTCTTTTTCCACATCAAGCCTAATC 59.848 38.462 0.00 0.00 0.00 1.75
1727 1766 6.012745 ACTCTTTTTCCACATCAAGCCTAAT 58.987 36.000 0.00 0.00 0.00 1.73
1729 1768 4.761739 CACTCTTTTTCCACATCAAGCCTA 59.238 41.667 0.00 0.00 0.00 3.93
1730 1769 3.571401 CACTCTTTTTCCACATCAAGCCT 59.429 43.478 0.00 0.00 0.00 4.58
1732 1771 4.574599 ACACTCTTTTTCCACATCAAGC 57.425 40.909 0.00 0.00 0.00 4.01
1733 1772 5.163519 ACCAACACTCTTTTTCCACATCAAG 60.164 40.000 0.00 0.00 0.00 3.02
1734 1773 4.709397 ACCAACACTCTTTTTCCACATCAA 59.291 37.500 0.00 0.00 0.00 2.57
1735 1774 4.277476 ACCAACACTCTTTTTCCACATCA 58.723 39.130 0.00 0.00 0.00 3.07
1774 1813 3.347077 AAGGTCTGATCCTTGAGCTTG 57.653 47.619 17.87 0.00 45.50 4.01
1789 1828 4.483476 ACGTCAAAATGCACTAAAGGTC 57.517 40.909 0.00 0.00 0.00 3.85
1798 1837 8.454894 TCTTTATATTGCTAACGTCAAAATGCA 58.545 29.630 0.00 0.00 0.00 3.96
1825 1864 5.715921 TCAGTCCTCCATATCAGGATGTAA 58.284 41.667 3.64 0.00 42.24 2.41
1854 1893 5.245751 AGAGACCCAACAGCTATCATCATAG 59.754 44.000 0.00 0.00 35.86 2.23
2009 2056 4.730949 AGCAGCAGCAACATCAAATAAT 57.269 36.364 3.17 0.00 45.49 1.28
2173 2221 5.236478 CAGTCACACCACAACTTAACCTAAG 59.764 44.000 0.00 0.00 41.51 2.18
2348 2396 3.392947 TGGTGTCAAGGGTTCTATCAACA 59.607 43.478 0.00 0.00 0.00 3.33
2619 2668 8.785946 CATTTTGGGCAATTTTCTTTGTAGATT 58.214 29.630 0.00 0.00 0.00 2.40
2749 2799 9.028097 ACCTACAGGCACATCAATGATTCATTG 62.028 40.741 26.55 26.55 44.32 2.82
2773 2823 2.149973 AAGGGAAGGATCATGCAACC 57.850 50.000 0.00 0.00 0.00 3.77
3015 3423 3.974871 TTCGTACTATCATGTAGCGCA 57.025 42.857 11.47 0.00 0.00 6.09
3287 3760 4.164796 ACAGATATTGAGGAGTGCAATCCA 59.835 41.667 32.85 14.86 42.26 3.41
3338 3811 7.598278 AGATAGATACCAAGTTAGCAGATTCG 58.402 38.462 0.00 0.00 0.00 3.34
3379 3852 8.303876 ACAAAAATCGTCTAATAAGCACCAAAT 58.696 29.630 0.00 0.00 0.00 2.32
3433 3906 7.713507 CGAAAGATTATGTCCCCACTGTAATAA 59.286 37.037 0.00 0.00 0.00 1.40
3434 3907 7.147620 ACGAAAGATTATGTCCCCACTGTAATA 60.148 37.037 0.00 0.00 0.00 0.98
3819 4292 3.131223 TCTGGATCTCCTGCTTTAACTCG 59.869 47.826 0.00 0.00 36.82 4.18
3858 4331 4.593206 CAGAGGGATTAAGGCACATACCTA 59.407 45.833 0.00 0.00 39.93 3.08
3897 4370 2.607038 GGTTTCAGGTTCGTGAAATGCC 60.607 50.000 18.78 14.07 45.71 4.40
3900 4373 2.567985 ACGGTTTCAGGTTCGTGAAAT 58.432 42.857 18.78 5.69 45.71 2.17
3907 4380 1.071228 AGTGGGTACGGTTTCAGGTTC 59.929 52.381 0.00 0.00 0.00 3.62
3911 4384 0.250124 TGCAGTGGGTACGGTTTCAG 60.250 55.000 0.00 0.00 0.00 3.02
4021 4494 8.954350 CCATCAACAGAAAATAGAATCTTCAGT 58.046 33.333 0.00 0.00 0.00 3.41
4082 4555 2.669950 GCGTTCGTGGGTAAAATGCAAT 60.670 45.455 0.00 0.00 35.49 3.56
4093 4566 0.519519 TATTGCAAAGCGTTCGTGGG 59.480 50.000 1.71 0.00 0.00 4.61
4096 4569 4.550063 CGTCATATATTGCAAAGCGTTCGT 60.550 41.667 1.71 0.00 0.00 3.85
4100 4573 5.977171 TTACGTCATATATTGCAAAGCGT 57.023 34.783 1.71 9.01 0.00 5.07
4116 4589 9.343103 CAGACATCATATACCTTGTATTACGTC 57.657 37.037 0.00 0.00 0.00 4.34
4117 4590 9.074576 TCAGACATCATATACCTTGTATTACGT 57.925 33.333 0.00 0.00 0.00 3.57
4125 4684 7.219322 TGACCAATCAGACATCATATACCTTG 58.781 38.462 0.00 0.00 0.00 3.61
4149 4708 4.730657 ACGGTATGTCGAAAACTACTCTG 58.269 43.478 0.00 0.00 0.00 3.35
4177 4736 2.287608 TGAACTGTGAGCTAGTGTCGTG 60.288 50.000 0.00 0.00 0.00 4.35
4199 4758 8.405531 TGTAGAAAACAATATAGCAAAGCATCC 58.594 33.333 0.00 0.00 34.29 3.51
4274 4902 6.437928 TGAAACATTGTTAGACAAGACATGC 58.562 36.000 1.76 0.00 41.94 4.06
4278 4906 6.970484 ACCATGAAACATTGTTAGACAAGAC 58.030 36.000 1.76 0.00 41.94 3.01
4289 4920 7.549839 ACTGGAATGATTACCATGAAACATTG 58.450 34.615 7.18 0.00 35.24 2.82
4310 4941 3.429141 CGCTGCAGCTGGAACTGG 61.429 66.667 34.22 14.00 38.16 4.00
4439 5070 1.967779 GAAGCCCCCTTTTGCAAAGTA 59.032 47.619 12.41 0.00 0.00 2.24
4509 5140 5.552870 AGTCAGGACAACAAATCTGTACT 57.447 39.130 1.84 0.00 38.58 2.73
4510 5141 6.260050 TCAAAGTCAGGACAACAAATCTGTAC 59.740 38.462 1.84 0.00 33.45 2.90
4511 5142 6.353323 TCAAAGTCAGGACAACAAATCTGTA 58.647 36.000 1.84 0.00 33.45 2.74
4512 5143 5.192927 TCAAAGTCAGGACAACAAATCTGT 58.807 37.500 1.84 0.00 37.39 3.41
4513 5144 5.756195 TCAAAGTCAGGACAACAAATCTG 57.244 39.130 1.84 0.00 0.00 2.90
4591 5222 7.067494 ACTCATAAAAACAACTTGCTCTCTTGT 59.933 33.333 0.00 0.00 0.00 3.16
4598 5229 6.064717 AGAGGACTCATAAAAACAACTTGCT 58.935 36.000 1.75 0.00 0.00 3.91
4712 5346 4.116961 GGTAAACTTGTCTTTGTTTGGCC 58.883 43.478 0.00 0.00 37.06 5.36
4736 5370 9.855021 CCACTAAAACTGAAAGAAGAAGAAAAA 57.145 29.630 0.00 0.00 37.43 1.94
4739 5373 7.282450 GTCCCACTAAAACTGAAAGAAGAAGAA 59.718 37.037 0.00 0.00 37.43 2.52
4740 5374 6.766467 GTCCCACTAAAACTGAAAGAAGAAGA 59.234 38.462 0.00 0.00 37.43 2.87
4741 5375 6.292919 CGTCCCACTAAAACTGAAAGAAGAAG 60.293 42.308 0.00 0.00 37.43 2.85
4744 5378 4.814771 ACGTCCCACTAAAACTGAAAGAAG 59.185 41.667 0.00 0.00 37.43 2.85
4799 5433 7.661847 AGAAAAGAGGTGTTCGACAGATAAAAT 59.338 33.333 0.00 0.00 0.00 1.82
4801 5435 6.423905 CAGAAAAGAGGTGTTCGACAGATAAA 59.576 38.462 0.00 0.00 0.00 1.40
4802 5436 5.926542 CAGAAAAGAGGTGTTCGACAGATAA 59.073 40.000 0.00 0.00 0.00 1.75
4803 5437 5.010719 ACAGAAAAGAGGTGTTCGACAGATA 59.989 40.000 0.00 0.00 0.00 1.98
4804 5438 4.202264 ACAGAAAAGAGGTGTTCGACAGAT 60.202 41.667 0.00 0.00 0.00 2.90
4805 5439 3.132289 ACAGAAAAGAGGTGTTCGACAGA 59.868 43.478 0.00 0.00 0.00 3.41
4806 5440 3.458189 ACAGAAAAGAGGTGTTCGACAG 58.542 45.455 0.00 0.00 0.00 3.51
4807 5441 3.454375 GACAGAAAAGAGGTGTTCGACA 58.546 45.455 0.00 0.00 0.00 4.35
4808 5442 2.471743 CGACAGAAAAGAGGTGTTCGAC 59.528 50.000 0.00 0.00 0.00 4.20
4809 5443 2.359848 TCGACAGAAAAGAGGTGTTCGA 59.640 45.455 0.00 0.00 0.00 3.71
4810 5444 2.739292 TCGACAGAAAAGAGGTGTTCG 58.261 47.619 0.00 0.00 0.00 3.95
4811 5445 4.120589 AGTTCGACAGAAAAGAGGTGTTC 58.879 43.478 0.00 0.00 38.23 3.18
4812 5446 4.138487 AGTTCGACAGAAAAGAGGTGTT 57.862 40.909 0.00 0.00 38.23 3.32
4813 5447 3.821421 AGTTCGACAGAAAAGAGGTGT 57.179 42.857 0.00 0.00 38.23 4.16
4976 5611 1.654105 CCACGACACACGCTATCTTTC 59.346 52.381 0.00 0.00 46.94 2.62
5114 5802 9.547279 TGGATGTATATAGACACATTACTGGAT 57.453 33.333 1.52 0.00 35.55 3.41
5177 5907 6.679843 CATCTACTCCCTCCGTTTCTAATAC 58.320 44.000 0.00 0.00 0.00 1.89
5182 5912 1.757699 GCATCTACTCCCTCCGTTTCT 59.242 52.381 0.00 0.00 0.00 2.52
5183 5913 1.757699 AGCATCTACTCCCTCCGTTTC 59.242 52.381 0.00 0.00 0.00 2.78
5184 5914 1.757699 GAGCATCTACTCCCTCCGTTT 59.242 52.381 0.00 0.00 0.00 3.60
5222 5977 0.539051 CTCGGCCTCTTCCTGACAAT 59.461 55.000 0.00 0.00 0.00 2.71
5234 5989 2.363147 GACCTCTCACCTCGGCCT 60.363 66.667 0.00 0.00 0.00 5.19
5235 5990 2.569218 TAGGACCTCTCACCTCGGCC 62.569 65.000 0.00 0.00 37.68 6.13
5259 6019 5.163581 GGCATCATCTATCACTGTTTTGCTT 60.164 40.000 0.00 0.00 0.00 3.91
5401 6161 3.296854 AGCTCCATAACCGATCACTGTA 58.703 45.455 0.00 0.00 0.00 2.74


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.