Multiple sequence alignment - TraesCS4B01G063000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G063000 chr4B 100.000 2753 0 0 1 2753 54865581 54862829 0.000000e+00 5084.0
1 TraesCS4B01G063000 chr4B 97.619 42 0 1 180 221 276014094 276014054 1.370000e-08 71.3
2 TraesCS4B01G063000 chr4D 94.891 2114 75 19 509 2598 37611178 37609074 0.000000e+00 3275.0
3 TraesCS4B01G063000 chr4D 89.820 167 17 0 2587 2753 95820554 95820720 5.970000e-52 215.0
4 TraesCS4B01G063000 chr4D 93.182 88 5 1 1 88 238933442 238933356 8.000000e-26 128.0
5 TraesCS4B01G063000 chr4A 96.329 1825 57 6 717 2540 563679672 563677857 0.000000e+00 2990.0
6 TraesCS4B01G063000 chr7B 81.759 1387 239 10 847 2232 586244541 586245914 0.000000e+00 1147.0
7 TraesCS4B01G063000 chr7B 89.634 164 17 0 2590 2753 464569154 464568991 2.780000e-50 209.0
8 TraesCS4B01G063000 chr7B 92.941 85 5 1 1 84 333388022 333388106 3.720000e-24 122.0
9 TraesCS4B01G063000 chr7A 80.000 1575 282 25 847 2401 624959655 624961216 0.000000e+00 1133.0
10 TraesCS4B01G063000 chr7D 81.085 1401 244 16 847 2232 542978966 542980360 0.000000e+00 1099.0
11 TraesCS4B01G063000 chr7D 82.182 275 44 3 1874 2144 543006682 543006955 5.930000e-57 231.0
12 TraesCS4B01G063000 chr7D 89.583 48 5 0 177 224 609688762 609688809 8.230000e-06 62.1
13 TraesCS4B01G063000 chrUn 91.018 167 15 0 2587 2753 398592909 398593075 2.760000e-55 226.0
14 TraesCS4B01G063000 chrUn 90.217 92 6 3 1 91 92757585 92757496 1.730000e-22 117.0
15 TraesCS4B01G063000 chr2D 91.018 167 15 0 2587 2753 610487780 610487946 2.760000e-55 226.0
16 TraesCS4B01G063000 chr5B 90.476 168 15 1 2587 2753 634537991 634538158 1.280000e-53 220.0
17 TraesCS4B01G063000 chr5B 95.122 82 0 4 1 82 128848457 128848534 2.880000e-25 126.0
18 TraesCS4B01G063000 chr5B 83.051 118 18 2 517 632 54199597 54199480 3.750000e-19 106.0
19 TraesCS4B01G063000 chr5B 80.488 123 22 2 512 632 54395545 54395423 2.920000e-15 93.5
20 TraesCS4B01G063000 chr5D 91.195 159 14 0 2595 2753 57095291 57095449 1.660000e-52 217.0
21 TraesCS4B01G063000 chr5D 89.222 167 18 0 2587 2753 100119982 100120148 2.780000e-50 209.0
22 TraesCS4B01G063000 chr5D 100.000 28 0 0 347 374 487157369 487157342 5.000000e-03 52.8
23 TraesCS4B01G063000 chr3D 89.222 167 18 0 2587 2753 577459918 577460084 2.780000e-50 209.0
24 TraesCS4B01G063000 chr3D 91.954 87 2 4 1 87 539919420 539919501 1.730000e-22 117.0
25 TraesCS4B01G063000 chr2B 89.222 167 17 1 2587 2753 658610505 658610670 9.990000e-50 207.0
26 TraesCS4B01G063000 chr6D 98.630 73 0 1 1 73 386383935 386384006 8.000000e-26 128.0
27 TraesCS4B01G063000 chr1B 89.216 102 8 3 1 100 670865109 670865009 1.040000e-24 124.0
28 TraesCS4B01G063000 chr6A 92.135 89 4 3 1 86 14823397 14823485 3.720000e-24 122.0
29 TraesCS4B01G063000 chr5A 91.011 89 5 3 1 87 570399746 570399833 1.730000e-22 117.0
30 TraesCS4B01G063000 chr6B 87.931 58 4 3 158 214 49352540 49352595 6.360000e-07 65.8
31 TraesCS4B01G063000 chr1A 94.286 35 2 0 187 221 568334435 568334401 1.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G063000 chr4B 54862829 54865581 2752 True 5084 5084 100.000 1 2753 1 chr4B.!!$R1 2752
1 TraesCS4B01G063000 chr4D 37609074 37611178 2104 True 3275 3275 94.891 509 2598 1 chr4D.!!$R1 2089
2 TraesCS4B01G063000 chr4A 563677857 563679672 1815 True 2990 2990 96.329 717 2540 1 chr4A.!!$R1 1823
3 TraesCS4B01G063000 chr7B 586244541 586245914 1373 False 1147 1147 81.759 847 2232 1 chr7B.!!$F2 1385
4 TraesCS4B01G063000 chr7A 624959655 624961216 1561 False 1133 1133 80.000 847 2401 1 chr7A.!!$F1 1554
5 TraesCS4B01G063000 chr7D 542978966 542980360 1394 False 1099 1099 81.085 847 2232 1 chr7D.!!$F1 1385

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
157 158 0.036577 AACCTGAGCTGCTACTGCTG 60.037 55.0 0.15 0.0 38.7 4.41 F
368 369 0.036952 CGCAGACATATAGGGGGCAG 60.037 60.0 0.00 0.0 0.0 4.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1365 1382 0.095935 CGCTCATGTTCAAGAAGGCG 59.904 55.0 0.00 0.00 35.75 5.52 R
2244 2305 0.040514 CCGATCGTGCTCTAGCTGAG 60.041 60.0 15.09 2.39 45.33 3.35 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
50 51 8.637196 AATAACTTTATTATTGCCTCTAGGGC 57.363 34.615 13.60 13.60 44.71 5.19
62 63 4.982241 CCTCTAGGGCATATTTCCTTCA 57.018 45.455 0.00 0.00 34.75 3.02
63 64 5.511386 CCTCTAGGGCATATTTCCTTCAT 57.489 43.478 0.00 0.00 34.75 2.57
64 65 5.251764 CCTCTAGGGCATATTTCCTTCATG 58.748 45.833 0.00 0.00 34.75 3.07
65 66 5.222007 CCTCTAGGGCATATTTCCTTCATGT 60.222 44.000 0.00 0.00 34.75 3.21
66 67 5.624159 TCTAGGGCATATTTCCTTCATGTG 58.376 41.667 0.00 0.00 34.75 3.21
67 68 2.961062 AGGGCATATTTCCTTCATGTGC 59.039 45.455 0.00 0.00 37.87 4.57
68 69 2.961062 GGGCATATTTCCTTCATGTGCT 59.039 45.455 0.00 0.00 38.46 4.40
69 70 3.005155 GGGCATATTTCCTTCATGTGCTC 59.995 47.826 0.00 0.00 38.46 4.26
70 71 3.005155 GGCATATTTCCTTCATGTGCTCC 59.995 47.826 0.00 0.00 38.46 4.70
71 72 3.005155 GCATATTTCCTTCATGTGCTCCC 59.995 47.826 0.00 0.00 36.21 4.30
72 73 2.905415 ATTTCCTTCATGTGCTCCCA 57.095 45.000 0.00 0.00 0.00 4.37
73 74 2.205022 TTTCCTTCATGTGCTCCCAG 57.795 50.000 0.00 0.00 0.00 4.45
74 75 0.322816 TTCCTTCATGTGCTCCCAGC 60.323 55.000 0.00 0.00 42.82 4.85
75 76 2.110967 CCTTCATGTGCTCCCAGCG 61.111 63.158 0.00 0.00 46.26 5.18
76 77 2.046023 TTCATGTGCTCCCAGCGG 60.046 61.111 0.00 0.00 46.26 5.52
77 78 2.526450 CTTCATGTGCTCCCAGCGGA 62.526 60.000 0.00 0.00 46.26 5.54
78 79 2.046023 CATGTGCTCCCAGCGGAA 60.046 61.111 0.00 0.00 46.26 4.30
79 80 2.045926 ATGTGCTCCCAGCGGAAC 60.046 61.111 0.00 0.00 46.26 3.62
80 81 3.628646 ATGTGCTCCCAGCGGAACC 62.629 63.158 0.00 0.00 46.26 3.62
81 82 4.021925 GTGCTCCCAGCGGAACCT 62.022 66.667 0.00 0.00 46.26 3.50
82 83 3.706373 TGCTCCCAGCGGAACCTC 61.706 66.667 0.00 0.00 46.26 3.85
83 84 4.475135 GCTCCCAGCGGAACCTCC 62.475 72.222 0.00 0.00 37.86 4.30
84 85 2.685380 CTCCCAGCGGAACCTCCT 60.685 66.667 0.00 0.00 37.86 3.69
85 86 2.683933 TCCCAGCGGAACCTCCTC 60.684 66.667 0.00 0.00 34.19 3.71
86 87 3.787001 CCCAGCGGAACCTCCTCC 61.787 72.222 0.00 0.00 33.30 4.30
87 88 2.685380 CCAGCGGAACCTCCTCCT 60.685 66.667 0.00 0.00 33.30 3.69
88 89 2.294078 CCAGCGGAACCTCCTCCTT 61.294 63.158 0.00 0.00 33.30 3.36
89 90 1.679898 CAGCGGAACCTCCTCCTTT 59.320 57.895 0.00 0.00 33.30 3.11
90 91 0.036875 CAGCGGAACCTCCTCCTTTT 59.963 55.000 0.00 0.00 33.30 2.27
91 92 0.325272 AGCGGAACCTCCTCCTTTTC 59.675 55.000 0.00 0.00 33.30 2.29
92 93 0.325272 GCGGAACCTCCTCCTTTTCT 59.675 55.000 0.00 0.00 33.30 2.52
93 94 1.271434 GCGGAACCTCCTCCTTTTCTT 60.271 52.381 0.00 0.00 33.30 2.52
94 95 2.814469 GCGGAACCTCCTCCTTTTCTTT 60.814 50.000 0.00 0.00 33.30 2.52
95 96 3.487372 CGGAACCTCCTCCTTTTCTTTT 58.513 45.455 0.00 0.00 33.30 2.27
96 97 3.889538 CGGAACCTCCTCCTTTTCTTTTT 59.110 43.478 0.00 0.00 33.30 1.94
114 115 2.748461 TTTTCGTTTTGTCGCCTCAG 57.252 45.000 0.00 0.00 0.00 3.35
115 116 1.658994 TTTCGTTTTGTCGCCTCAGT 58.341 45.000 0.00 0.00 0.00 3.41
116 117 1.658994 TTCGTTTTGTCGCCTCAGTT 58.341 45.000 0.00 0.00 0.00 3.16
117 118 1.658994 TCGTTTTGTCGCCTCAGTTT 58.341 45.000 0.00 0.00 0.00 2.66
118 119 2.011222 TCGTTTTGTCGCCTCAGTTTT 58.989 42.857 0.00 0.00 0.00 2.43
119 120 2.420722 TCGTTTTGTCGCCTCAGTTTTT 59.579 40.909 0.00 0.00 0.00 1.94
120 121 2.781646 CGTTTTGTCGCCTCAGTTTTTC 59.218 45.455 0.00 0.00 0.00 2.29
121 122 3.113322 GTTTTGTCGCCTCAGTTTTTCC 58.887 45.455 0.00 0.00 0.00 3.13
122 123 2.341846 TTGTCGCCTCAGTTTTTCCT 57.658 45.000 0.00 0.00 0.00 3.36
123 124 2.341846 TGTCGCCTCAGTTTTTCCTT 57.658 45.000 0.00 0.00 0.00 3.36
124 125 2.650322 TGTCGCCTCAGTTTTTCCTTT 58.350 42.857 0.00 0.00 0.00 3.11
125 126 3.020984 TGTCGCCTCAGTTTTTCCTTTT 58.979 40.909 0.00 0.00 0.00 2.27
126 127 3.181491 TGTCGCCTCAGTTTTTCCTTTTG 60.181 43.478 0.00 0.00 0.00 2.44
127 128 3.066203 GTCGCCTCAGTTTTTCCTTTTGA 59.934 43.478 0.00 0.00 0.00 2.69
128 129 3.066203 TCGCCTCAGTTTTTCCTTTTGAC 59.934 43.478 0.00 0.00 0.00 3.18
129 130 3.066760 CGCCTCAGTTTTTCCTTTTGACT 59.933 43.478 0.00 0.00 0.00 3.41
130 131 4.440112 CGCCTCAGTTTTTCCTTTTGACTT 60.440 41.667 0.00 0.00 0.00 3.01
131 132 4.805719 GCCTCAGTTTTTCCTTTTGACTTG 59.194 41.667 0.00 0.00 0.00 3.16
132 133 5.394115 GCCTCAGTTTTTCCTTTTGACTTGA 60.394 40.000 0.00 0.00 0.00 3.02
133 134 6.630071 CCTCAGTTTTTCCTTTTGACTTGAA 58.370 36.000 0.00 0.00 0.00 2.69
134 135 6.531594 CCTCAGTTTTTCCTTTTGACTTGAAC 59.468 38.462 0.00 0.00 0.00 3.18
135 136 7.227049 TCAGTTTTTCCTTTTGACTTGAACT 57.773 32.000 0.00 0.00 0.00 3.01
136 137 7.666623 TCAGTTTTTCCTTTTGACTTGAACTT 58.333 30.769 0.00 0.00 0.00 2.66
137 138 7.598493 TCAGTTTTTCCTTTTGACTTGAACTTG 59.402 33.333 0.00 0.00 0.00 3.16
138 139 7.598493 CAGTTTTTCCTTTTGACTTGAACTTGA 59.402 33.333 0.00 0.00 0.00 3.02
139 140 8.147704 AGTTTTTCCTTTTGACTTGAACTTGAA 58.852 29.630 0.00 0.00 0.00 2.69
140 141 7.883229 TTTTCCTTTTGACTTGAACTTGAAC 57.117 32.000 0.00 0.00 0.00 3.18
141 142 5.576447 TCCTTTTGACTTGAACTTGAACC 57.424 39.130 0.00 0.00 0.00 3.62
142 143 5.261216 TCCTTTTGACTTGAACTTGAACCT 58.739 37.500 0.00 0.00 0.00 3.50
143 144 5.125417 TCCTTTTGACTTGAACTTGAACCTG 59.875 40.000 0.00 0.00 0.00 4.00
144 145 5.125417 CCTTTTGACTTGAACTTGAACCTGA 59.875 40.000 0.00 0.00 0.00 3.86
145 146 5.818136 TTTGACTTGAACTTGAACCTGAG 57.182 39.130 0.00 0.00 0.00 3.35
146 147 3.206150 TGACTTGAACTTGAACCTGAGC 58.794 45.455 0.00 0.00 0.00 4.26
147 148 3.118261 TGACTTGAACTTGAACCTGAGCT 60.118 43.478 0.00 0.00 0.00 4.09
148 149 3.209410 ACTTGAACTTGAACCTGAGCTG 58.791 45.455 0.00 0.00 0.00 4.24
149 150 1.597742 TGAACTTGAACCTGAGCTGC 58.402 50.000 0.00 0.00 0.00 5.25
150 151 1.141657 TGAACTTGAACCTGAGCTGCT 59.858 47.619 0.00 0.00 0.00 4.24
151 152 2.368548 TGAACTTGAACCTGAGCTGCTA 59.631 45.455 0.15 0.00 0.00 3.49
152 153 2.464157 ACTTGAACCTGAGCTGCTAC 57.536 50.000 0.15 0.00 0.00 3.58
153 154 1.974236 ACTTGAACCTGAGCTGCTACT 59.026 47.619 0.15 0.00 0.00 2.57
154 155 2.289320 ACTTGAACCTGAGCTGCTACTG 60.289 50.000 0.15 0.82 0.00 2.74
155 156 0.036952 TGAACCTGAGCTGCTACTGC 60.037 55.000 0.15 0.00 40.20 4.40
156 157 0.248843 GAACCTGAGCTGCTACTGCT 59.751 55.000 0.15 0.00 41.16 4.24
157 158 0.036577 AACCTGAGCTGCTACTGCTG 60.037 55.000 0.15 0.00 38.70 4.41
158 159 1.190833 ACCTGAGCTGCTACTGCTGT 61.191 55.000 0.15 0.66 38.70 4.40
159 160 0.036577 CCTGAGCTGCTACTGCTGTT 60.037 55.000 0.15 0.00 38.70 3.16
160 161 1.077123 CTGAGCTGCTACTGCTGTTG 58.923 55.000 0.15 0.58 38.70 3.33
161 162 0.394192 TGAGCTGCTACTGCTGTTGT 59.606 50.000 0.15 0.00 38.70 3.32
162 163 0.795085 GAGCTGCTACTGCTGTTGTG 59.205 55.000 0.15 0.00 38.70 3.33
163 164 0.604780 AGCTGCTACTGCTGTTGTGG 60.605 55.000 0.00 0.00 37.28 4.17
164 165 1.580845 GCTGCTACTGCTGTTGTGGG 61.581 60.000 0.09 0.00 39.81 4.61
165 166 0.250467 CTGCTACTGCTGTTGTGGGT 60.250 55.000 0.09 0.00 40.48 4.51
166 167 0.182537 TGCTACTGCTGTTGTGGGTT 59.817 50.000 0.09 0.00 40.48 4.11
167 168 0.593128 GCTACTGCTGTTGTGGGTTG 59.407 55.000 0.09 0.00 36.03 3.77
168 169 1.967319 CTACTGCTGTTGTGGGTTGT 58.033 50.000 0.09 0.00 0.00 3.32
169 170 2.297701 CTACTGCTGTTGTGGGTTGTT 58.702 47.619 0.09 0.00 0.00 2.83
170 171 1.555967 ACTGCTGTTGTGGGTTGTTT 58.444 45.000 0.00 0.00 0.00 2.83
171 172 1.204467 ACTGCTGTTGTGGGTTGTTTG 59.796 47.619 0.00 0.00 0.00 2.93
172 173 1.476085 CTGCTGTTGTGGGTTGTTTGA 59.524 47.619 0.00 0.00 0.00 2.69
173 174 2.101249 CTGCTGTTGTGGGTTGTTTGAT 59.899 45.455 0.00 0.00 0.00 2.57
174 175 2.159128 TGCTGTTGTGGGTTGTTTGATG 60.159 45.455 0.00 0.00 0.00 3.07
175 176 2.472816 CTGTTGTGGGTTGTTTGATGC 58.527 47.619 0.00 0.00 0.00 3.91
176 177 1.202348 TGTTGTGGGTTGTTTGATGCG 60.202 47.619 0.00 0.00 0.00 4.73
177 178 0.387202 TTGTGGGTTGTTTGATGCGG 59.613 50.000 0.00 0.00 0.00 5.69
178 179 0.466372 TGTGGGTTGTTTGATGCGGA 60.466 50.000 0.00 0.00 0.00 5.54
179 180 0.887933 GTGGGTTGTTTGATGCGGAT 59.112 50.000 0.00 0.00 0.00 4.18
180 181 0.887247 TGGGTTGTTTGATGCGGATG 59.113 50.000 0.00 0.00 0.00 3.51
181 182 0.458370 GGGTTGTTTGATGCGGATGC 60.458 55.000 0.00 0.00 43.20 3.91
182 183 0.527565 GGTTGTTTGATGCGGATGCT 59.472 50.000 0.00 0.00 43.34 3.79
183 184 1.067635 GGTTGTTTGATGCGGATGCTT 60.068 47.619 0.00 0.00 43.34 3.91
184 185 2.610232 GGTTGTTTGATGCGGATGCTTT 60.610 45.455 0.00 0.00 43.34 3.51
185 186 3.366883 GGTTGTTTGATGCGGATGCTTTA 60.367 43.478 0.00 0.00 43.34 1.85
186 187 4.423732 GTTGTTTGATGCGGATGCTTTAT 58.576 39.130 0.00 0.00 43.34 1.40
187 188 5.449862 GGTTGTTTGATGCGGATGCTTTATA 60.450 40.000 0.00 0.00 43.34 0.98
188 189 5.826601 TGTTTGATGCGGATGCTTTATAA 57.173 34.783 0.00 0.00 43.34 0.98
189 190 6.389830 TGTTTGATGCGGATGCTTTATAAT 57.610 33.333 0.00 0.00 43.34 1.28
190 191 7.503521 TGTTTGATGCGGATGCTTTATAATA 57.496 32.000 0.00 0.00 43.34 0.98
191 192 8.109705 TGTTTGATGCGGATGCTTTATAATAT 57.890 30.769 0.00 0.00 43.34 1.28
192 193 9.225436 TGTTTGATGCGGATGCTTTATAATATA 57.775 29.630 0.00 0.00 43.34 0.86
204 205 7.443259 GCTTTATAATATAAAGCGGGGTGAA 57.557 36.000 30.20 0.00 46.31 3.18
205 206 7.878036 GCTTTATAATATAAAGCGGGGTGAAA 58.122 34.615 30.20 0.57 46.31 2.69
206 207 7.806487 GCTTTATAATATAAAGCGGGGTGAAAC 59.194 37.037 30.20 10.98 46.31 2.78
222 223 5.635549 GTGAAACCCTTTTTCGTCAAATG 57.364 39.130 0.00 0.00 0.00 2.32
223 224 5.344884 GTGAAACCCTTTTTCGTCAAATGA 58.655 37.500 0.00 0.00 0.00 2.57
224 225 5.983118 GTGAAACCCTTTTTCGTCAAATGAT 59.017 36.000 0.00 0.00 0.00 2.45
225 226 6.143919 GTGAAACCCTTTTTCGTCAAATGATC 59.856 38.462 0.00 0.00 0.00 2.92
226 227 6.040391 TGAAACCCTTTTTCGTCAAATGATCT 59.960 34.615 0.00 0.00 0.00 2.75
227 228 6.405278 AACCCTTTTTCGTCAAATGATCTT 57.595 33.333 0.00 0.00 0.00 2.40
228 229 5.772521 ACCCTTTTTCGTCAAATGATCTTG 58.227 37.500 0.00 0.00 0.00 3.02
229 230 4.622740 CCCTTTTTCGTCAAATGATCTTGC 59.377 41.667 0.00 0.00 0.00 4.01
230 231 5.464168 CCTTTTTCGTCAAATGATCTTGCT 58.536 37.500 0.00 0.00 0.00 3.91
231 232 6.349280 CCCTTTTTCGTCAAATGATCTTGCTA 60.349 38.462 0.00 0.00 0.00 3.49
232 233 7.253422 CCTTTTTCGTCAAATGATCTTGCTAT 58.747 34.615 0.00 0.00 0.00 2.97
233 234 7.219535 CCTTTTTCGTCAAATGATCTTGCTATG 59.780 37.037 0.00 0.00 0.00 2.23
234 235 6.741992 TTTCGTCAAATGATCTTGCTATGT 57.258 33.333 0.00 0.00 0.00 2.29
235 236 7.841915 TTTCGTCAAATGATCTTGCTATGTA 57.158 32.000 0.00 0.00 0.00 2.29
236 237 8.437360 TTTCGTCAAATGATCTTGCTATGTAT 57.563 30.769 0.00 0.00 0.00 2.29
237 238 7.643528 TCGTCAAATGATCTTGCTATGTATC 57.356 36.000 0.00 0.00 0.00 2.24
238 239 7.209475 TCGTCAAATGATCTTGCTATGTATCA 58.791 34.615 0.00 0.00 33.20 2.15
239 240 7.874528 TCGTCAAATGATCTTGCTATGTATCAT 59.125 33.333 0.00 0.00 40.02 2.45
240 241 9.143631 CGTCAAATGATCTTGCTATGTATCATA 57.856 33.333 0.00 0.00 37.94 2.15
246 247 9.761504 ATGATCTTGCTATGTATCATACTATGC 57.238 33.333 0.00 0.00 37.32 3.14
247 248 8.975295 TGATCTTGCTATGTATCATACTATGCT 58.025 33.333 0.00 0.00 0.00 3.79
251 252 8.877808 TTGCTATGTATCATACTATGCTATGC 57.122 34.615 0.00 0.00 0.00 3.14
252 253 8.242729 TGCTATGTATCATACTATGCTATGCT 57.757 34.615 0.00 0.00 0.00 3.79
253 254 9.354673 TGCTATGTATCATACTATGCTATGCTA 57.645 33.333 0.00 0.00 0.00 3.49
262 263 9.859152 TCATACTATGCTATGCTATCTATCTGT 57.141 33.333 0.00 0.00 0.00 3.41
265 266 7.264221 ACTATGCTATGCTATCTATCTGTTGC 58.736 38.462 0.00 0.00 0.00 4.17
266 267 5.473066 TGCTATGCTATCTATCTGTTGCA 57.527 39.130 0.00 0.00 34.88 4.08
267 268 6.046290 TGCTATGCTATCTATCTGTTGCAT 57.954 37.500 0.00 0.00 42.64 3.96
268 269 5.873164 TGCTATGCTATCTATCTGTTGCATG 59.127 40.000 8.29 0.00 40.65 4.06
269 270 5.293814 GCTATGCTATCTATCTGTTGCATGG 59.706 44.000 8.29 6.63 40.65 3.66
270 271 4.961438 TGCTATCTATCTGTTGCATGGA 57.039 40.909 0.00 0.00 0.00 3.41
271 272 5.294734 TGCTATCTATCTGTTGCATGGAA 57.705 39.130 0.00 0.00 0.00 3.53
272 273 5.872963 TGCTATCTATCTGTTGCATGGAAT 58.127 37.500 1.94 0.00 0.00 3.01
273 274 6.301486 TGCTATCTATCTGTTGCATGGAATT 58.699 36.000 1.94 0.00 0.00 2.17
274 275 6.206048 TGCTATCTATCTGTTGCATGGAATTG 59.794 38.462 1.94 0.00 0.00 2.32
275 276 4.906065 TCTATCTGTTGCATGGAATTGC 57.094 40.909 1.94 0.00 43.07 3.56
285 286 2.940410 GCATGGAATTGCAAGGATTTGG 59.060 45.455 2.94 0.00 42.31 3.28
286 287 3.369681 GCATGGAATTGCAAGGATTTGGA 60.370 43.478 2.94 0.00 42.31 3.53
287 288 4.439057 CATGGAATTGCAAGGATTTGGAG 58.561 43.478 2.94 0.00 35.96 3.86
288 289 2.833338 TGGAATTGCAAGGATTTGGAGG 59.167 45.455 4.94 0.00 35.96 4.30
289 290 2.833943 GGAATTGCAAGGATTTGGAGGT 59.166 45.455 4.94 0.00 35.96 3.85
290 291 3.118992 GGAATTGCAAGGATTTGGAGGTC 60.119 47.826 4.94 0.00 35.96 3.85
291 292 2.978156 TTGCAAGGATTTGGAGGTCT 57.022 45.000 0.00 0.00 35.96 3.85
292 293 2.205022 TGCAAGGATTTGGAGGTCTG 57.795 50.000 0.00 0.00 34.79 3.51
293 294 1.272092 TGCAAGGATTTGGAGGTCTGG 60.272 52.381 0.00 0.00 34.79 3.86
294 295 1.004745 GCAAGGATTTGGAGGTCTGGA 59.995 52.381 0.00 0.00 34.79 3.86
295 296 2.357569 GCAAGGATTTGGAGGTCTGGAT 60.358 50.000 0.00 0.00 34.79 3.41
296 297 3.117888 GCAAGGATTTGGAGGTCTGGATA 60.118 47.826 0.00 0.00 34.79 2.59
297 298 4.446889 GCAAGGATTTGGAGGTCTGGATAT 60.447 45.833 0.00 0.00 34.79 1.63
298 299 4.989875 AGGATTTGGAGGTCTGGATATG 57.010 45.455 0.00 0.00 0.00 1.78
299 300 4.570926 AGGATTTGGAGGTCTGGATATGA 58.429 43.478 0.00 0.00 0.00 2.15
300 301 4.596643 AGGATTTGGAGGTCTGGATATGAG 59.403 45.833 0.00 0.00 0.00 2.90
301 302 4.263243 GGATTTGGAGGTCTGGATATGAGG 60.263 50.000 0.00 0.00 0.00 3.86
302 303 2.405618 TGGAGGTCTGGATATGAGGG 57.594 55.000 0.00 0.00 0.00 4.30
303 304 1.132721 TGGAGGTCTGGATATGAGGGG 60.133 57.143 0.00 0.00 0.00 4.79
304 305 1.650528 GAGGTCTGGATATGAGGGGG 58.349 60.000 0.00 0.00 0.00 5.40
323 324 2.731721 CGGCTGCGTACACGACAA 60.732 61.111 5.84 0.00 43.02 3.18
324 325 2.304401 CGGCTGCGTACACGACAAA 61.304 57.895 5.84 0.00 43.02 2.83
325 326 1.623081 CGGCTGCGTACACGACAAAT 61.623 55.000 5.84 0.00 43.02 2.32
326 327 0.179225 GGCTGCGTACACGACAAATG 60.179 55.000 5.84 0.00 43.02 2.32
327 328 0.787787 GCTGCGTACACGACAAATGA 59.212 50.000 5.84 0.00 43.02 2.57
328 329 1.201812 GCTGCGTACACGACAAATGAG 60.202 52.381 5.84 0.00 43.02 2.90
329 330 2.324860 CTGCGTACACGACAAATGAGA 58.675 47.619 5.84 0.00 43.02 3.27
330 331 2.324860 TGCGTACACGACAAATGAGAG 58.675 47.619 5.84 0.00 43.02 3.20
331 332 1.654105 GCGTACACGACAAATGAGAGG 59.346 52.381 5.84 0.00 43.02 3.69
332 333 2.925306 GCGTACACGACAAATGAGAGGT 60.925 50.000 5.84 0.00 43.02 3.85
333 334 2.661675 CGTACACGACAAATGAGAGGTG 59.338 50.000 0.00 0.00 43.02 4.00
334 335 2.169832 ACACGACAAATGAGAGGTGG 57.830 50.000 0.00 0.00 0.00 4.61
335 336 1.270839 ACACGACAAATGAGAGGTGGG 60.271 52.381 0.00 0.00 0.00 4.61
336 337 0.321653 ACGACAAATGAGAGGTGGGC 60.322 55.000 0.00 0.00 0.00 5.36
337 338 1.361668 CGACAAATGAGAGGTGGGCG 61.362 60.000 0.00 0.00 0.00 6.13
338 339 1.002134 ACAAATGAGAGGTGGGCGG 60.002 57.895 0.00 0.00 0.00 6.13
339 340 2.044946 AAATGAGAGGTGGGCGGC 60.045 61.111 0.00 0.00 0.00 6.53
340 341 3.645268 AAATGAGAGGTGGGCGGCC 62.645 63.158 23.42 23.42 0.00 6.13
358 359 2.101575 GACGCGTCCGCAGACATA 59.898 61.111 28.61 0.00 43.73 2.29
359 360 1.299165 GACGCGTCCGCAGACATAT 60.299 57.895 28.61 0.00 43.73 1.78
360 361 0.040692 GACGCGTCCGCAGACATATA 60.041 55.000 28.61 0.00 43.73 0.86
361 362 0.040336 ACGCGTCCGCAGACATATAG 60.040 55.000 5.58 0.00 43.73 1.31
362 363 0.729478 CGCGTCCGCAGACATATAGG 60.729 60.000 12.58 0.00 43.73 2.57
363 364 0.388649 GCGTCCGCAGACATATAGGG 60.389 60.000 6.82 0.00 43.73 3.53
364 365 0.243907 CGTCCGCAGACATATAGGGG 59.756 60.000 0.20 0.00 43.73 4.79
365 366 0.608640 GTCCGCAGACATATAGGGGG 59.391 60.000 0.00 0.00 42.99 5.40
366 367 1.192146 TCCGCAGACATATAGGGGGC 61.192 60.000 0.00 0.00 36.17 5.80
367 368 1.480212 CCGCAGACATATAGGGGGCA 61.480 60.000 0.00 0.00 0.00 5.36
368 369 0.036952 CGCAGACATATAGGGGGCAG 60.037 60.000 0.00 0.00 0.00 4.85
369 370 1.352083 GCAGACATATAGGGGGCAGA 58.648 55.000 0.00 0.00 0.00 4.26
370 371 1.912043 GCAGACATATAGGGGGCAGAT 59.088 52.381 0.00 0.00 0.00 2.90
371 372 2.307098 GCAGACATATAGGGGGCAGATT 59.693 50.000 0.00 0.00 0.00 2.40
372 373 3.245052 GCAGACATATAGGGGGCAGATTT 60.245 47.826 0.00 0.00 0.00 2.17
373 374 4.330250 CAGACATATAGGGGGCAGATTTG 58.670 47.826 0.00 0.00 0.00 2.32
374 375 4.042062 CAGACATATAGGGGGCAGATTTGA 59.958 45.833 0.00 0.00 0.00 2.69
375 376 4.854436 AGACATATAGGGGGCAGATTTGAT 59.146 41.667 0.00 0.00 0.00 2.57
376 377 5.314306 AGACATATAGGGGGCAGATTTGATT 59.686 40.000 0.00 0.00 0.00 2.57
377 378 6.505344 AGACATATAGGGGGCAGATTTGATTA 59.495 38.462 0.00 0.00 0.00 1.75
378 379 7.185304 AGACATATAGGGGGCAGATTTGATTAT 59.815 37.037 0.00 0.00 0.00 1.28
379 380 7.712537 ACATATAGGGGGCAGATTTGATTATT 58.287 34.615 0.00 0.00 0.00 1.40
380 381 7.836183 ACATATAGGGGGCAGATTTGATTATTC 59.164 37.037 0.00 0.00 0.00 1.75
381 382 3.849527 AGGGGGCAGATTTGATTATTCC 58.150 45.455 0.00 0.00 0.00 3.01
382 383 2.558359 GGGGGCAGATTTGATTATTCCG 59.442 50.000 0.00 0.00 0.00 4.30
383 384 2.558359 GGGGCAGATTTGATTATTCCGG 59.442 50.000 0.00 0.00 0.00 5.14
384 385 3.222603 GGGCAGATTTGATTATTCCGGT 58.777 45.455 0.00 0.00 0.00 5.28
385 386 3.636764 GGGCAGATTTGATTATTCCGGTT 59.363 43.478 0.00 0.00 0.00 4.44
386 387 4.499696 GGGCAGATTTGATTATTCCGGTTG 60.500 45.833 0.00 0.00 0.00 3.77
387 388 4.097892 GGCAGATTTGATTATTCCGGTTGT 59.902 41.667 0.00 0.00 0.00 3.32
388 389 5.394115 GGCAGATTTGATTATTCCGGTTGTT 60.394 40.000 0.00 0.00 0.00 2.83
389 390 5.516339 GCAGATTTGATTATTCCGGTTGTTG 59.484 40.000 0.00 0.00 0.00 3.33
390 391 6.035843 CAGATTTGATTATTCCGGTTGTTGG 58.964 40.000 0.00 0.00 0.00 3.77
391 392 5.714806 AGATTTGATTATTCCGGTTGTTGGT 59.285 36.000 0.00 0.00 0.00 3.67
392 393 4.775058 TTGATTATTCCGGTTGTTGGTG 57.225 40.909 0.00 0.00 0.00 4.17
393 394 2.490115 TGATTATTCCGGTTGTTGGTGC 59.510 45.455 0.00 0.00 0.00 5.01
394 395 2.279935 TTATTCCGGTTGTTGGTGCT 57.720 45.000 0.00 0.00 0.00 4.40
395 396 1.816074 TATTCCGGTTGTTGGTGCTC 58.184 50.000 0.00 0.00 0.00 4.26
396 397 0.110486 ATTCCGGTTGTTGGTGCTCT 59.890 50.000 0.00 0.00 0.00 4.09
397 398 0.759959 TTCCGGTTGTTGGTGCTCTA 59.240 50.000 0.00 0.00 0.00 2.43
398 399 0.759959 TCCGGTTGTTGGTGCTCTAA 59.240 50.000 0.00 0.00 0.00 2.10
399 400 1.141254 TCCGGTTGTTGGTGCTCTAAA 59.859 47.619 0.00 0.00 0.00 1.85
400 401 1.950909 CCGGTTGTTGGTGCTCTAAAA 59.049 47.619 0.00 0.00 0.00 1.52
401 402 2.556622 CCGGTTGTTGGTGCTCTAAAAT 59.443 45.455 0.00 0.00 0.00 1.82
402 403 3.754323 CCGGTTGTTGGTGCTCTAAAATA 59.246 43.478 0.00 0.00 0.00 1.40
403 404 4.398044 CCGGTTGTTGGTGCTCTAAAATAT 59.602 41.667 0.00 0.00 0.00 1.28
404 405 5.587043 CCGGTTGTTGGTGCTCTAAAATATA 59.413 40.000 0.00 0.00 0.00 0.86
405 406 6.262273 CCGGTTGTTGGTGCTCTAAAATATAT 59.738 38.462 0.00 0.00 0.00 0.86
406 407 7.201785 CCGGTTGTTGGTGCTCTAAAATATATT 60.202 37.037 0.00 0.00 0.00 1.28
407 408 8.832521 CGGTTGTTGGTGCTCTAAAATATATTA 58.167 33.333 0.00 0.00 0.00 0.98
460 461 8.780846 TTATTTATCCAATAACACGACACAGT 57.219 30.769 0.00 0.00 33.14 3.55
461 462 6.715344 TTTATCCAATAACACGACACAGTC 57.285 37.500 0.00 0.00 0.00 3.51
462 463 3.737032 TCCAATAACACGACACAGTCA 57.263 42.857 0.00 0.00 32.09 3.41
463 464 4.061357 TCCAATAACACGACACAGTCAA 57.939 40.909 0.00 0.00 32.09 3.18
464 465 4.637276 TCCAATAACACGACACAGTCAAT 58.363 39.130 0.00 0.00 32.09 2.57
465 466 4.688879 TCCAATAACACGACACAGTCAATC 59.311 41.667 0.00 0.00 32.09 2.67
466 467 4.690748 CCAATAACACGACACAGTCAATCT 59.309 41.667 0.00 0.00 32.09 2.40
467 468 5.867174 CCAATAACACGACACAGTCAATCTA 59.133 40.000 0.00 0.00 32.09 1.98
468 469 6.535150 CCAATAACACGACACAGTCAATCTAT 59.465 38.462 0.00 0.00 32.09 1.98
469 470 7.064609 CCAATAACACGACACAGTCAATCTATT 59.935 37.037 0.00 0.00 32.09 1.73
470 471 7.757097 ATAACACGACACAGTCAATCTATTC 57.243 36.000 0.00 0.00 32.09 1.75
471 472 4.495422 ACACGACACAGTCAATCTATTCC 58.505 43.478 0.00 0.00 32.09 3.01
472 473 4.021456 ACACGACACAGTCAATCTATTCCA 60.021 41.667 0.00 0.00 32.09 3.53
473 474 5.111989 CACGACACAGTCAATCTATTCCAT 58.888 41.667 0.00 0.00 32.09 3.41
474 475 5.582269 CACGACACAGTCAATCTATTCCATT 59.418 40.000 0.00 0.00 32.09 3.16
475 476 5.812642 ACGACACAGTCAATCTATTCCATTC 59.187 40.000 0.00 0.00 32.09 2.67
476 477 5.235186 CGACACAGTCAATCTATTCCATTCC 59.765 44.000 0.00 0.00 32.09 3.01
477 478 6.065976 ACACAGTCAATCTATTCCATTCCA 57.934 37.500 0.00 0.00 0.00 3.53
478 479 6.118170 ACACAGTCAATCTATTCCATTCCAG 58.882 40.000 0.00 0.00 0.00 3.86
479 480 5.530171 CACAGTCAATCTATTCCATTCCAGG 59.470 44.000 0.00 0.00 0.00 4.45
480 481 5.429762 ACAGTCAATCTATTCCATTCCAGGA 59.570 40.000 0.00 0.00 35.41 3.86
481 482 5.996513 CAGTCAATCTATTCCATTCCAGGAG 59.003 44.000 0.00 0.00 39.25 3.69
482 483 5.669447 AGTCAATCTATTCCATTCCAGGAGT 59.331 40.000 0.00 0.00 39.25 3.85
483 484 6.846505 AGTCAATCTATTCCATTCCAGGAGTA 59.153 38.462 0.00 0.00 39.25 2.59
484 485 7.016072 AGTCAATCTATTCCATTCCAGGAGTAG 59.984 40.741 6.27 6.27 44.80 2.57
488 489 3.914426 TTCCATTCCAGGAGTAGAAGC 57.086 47.619 0.00 0.00 39.25 3.86
489 490 2.119495 TCCATTCCAGGAGTAGAAGCC 58.881 52.381 0.00 0.00 32.77 4.35
490 491 2.122768 CCATTCCAGGAGTAGAAGCCT 58.877 52.381 0.00 0.00 33.99 4.58
491 492 9.573716 CTATTCCATTCCAGGAGTAGAAGCCTG 62.574 48.148 6.68 0.00 45.73 4.85
498 499 5.344743 CAGGAGTAGAAGCCTGTTATTGA 57.655 43.478 0.00 0.00 45.21 2.57
499 500 5.923204 CAGGAGTAGAAGCCTGTTATTGAT 58.077 41.667 0.00 0.00 45.21 2.57
500 501 5.988561 CAGGAGTAGAAGCCTGTTATTGATC 59.011 44.000 0.00 0.00 45.21 2.92
501 502 5.902431 AGGAGTAGAAGCCTGTTATTGATCT 59.098 40.000 0.00 0.00 32.06 2.75
502 503 5.988561 GGAGTAGAAGCCTGTTATTGATCTG 59.011 44.000 0.00 0.00 0.00 2.90
503 504 5.363939 AGTAGAAGCCTGTTATTGATCTGC 58.636 41.667 0.00 0.00 0.00 4.26
504 505 4.226427 AGAAGCCTGTTATTGATCTGCA 57.774 40.909 0.00 0.00 0.00 4.41
505 506 4.592942 AGAAGCCTGTTATTGATCTGCAA 58.407 39.130 0.00 0.00 41.53 4.08
507 508 4.913335 AGCCTGTTATTGATCTGCAATG 57.087 40.909 0.00 0.00 46.38 2.82
520 521 6.094719 TGATCTGCAATGTAATGCTCAAAAC 58.905 36.000 0.67 0.00 46.54 2.43
529 530 3.837213 AATGCTCAAAACCTGACGATG 57.163 42.857 0.00 0.00 0.00 3.84
545 546 4.083590 TGACGATGAAATTTGTCATGCGAA 60.084 37.500 0.00 0.00 38.38 4.70
553 554 7.815641 TGAAATTTGTCATGCGAAAAGAGATA 58.184 30.769 0.00 0.00 0.00 1.98
592 593 9.634021 TGTGTATAAGGATTTGCCATGTTATAA 57.366 29.630 0.00 0.00 40.02 0.98
611 612 9.944663 TGTTATAAAGCGAAAATTGCCTTATAG 57.055 29.630 0.00 0.00 34.46 1.31
661 671 8.607441 ATGCTACAACGATCAATTGTATATGT 57.393 30.769 16.10 8.26 40.73 2.29
663 673 8.334632 TGCTACAACGATCAATTGTATATGTTG 58.665 33.333 16.10 19.75 40.73 3.33
685 696 0.762842 TCGGGATCCATGGTACCTGG 60.763 60.000 26.24 19.09 34.93 4.45
688 699 1.071471 GATCCATGGTACCTGGGCG 59.929 63.158 22.65 5.43 34.36 6.13
696 707 2.758327 TACCTGGGCGCGTCAGAT 60.758 61.111 25.40 15.85 34.36 2.90
697 708 3.076258 TACCTGGGCGCGTCAGATG 62.076 63.158 25.40 15.62 34.36 2.90
707 723 3.309388 GCGCGTCAGATGTTAGATGTAT 58.691 45.455 8.43 0.00 0.00 2.29
712 728 6.345329 CGCGTCAGATGTTAGATGTATTGAAG 60.345 42.308 0.00 0.00 0.00 3.02
839 856 2.568062 TGTGGCCGAAAACCTACAGATA 59.432 45.455 0.00 0.00 0.00 1.98
1010 1027 4.148871 CGATATGAACGACATGCTTACCAG 59.851 45.833 9.32 0.00 39.77 4.00
1125 1142 2.113562 CCCCACCCGACCGAAAAA 59.886 61.111 0.00 0.00 0.00 1.94
1365 1382 2.740714 GCTGTTCGACGACATGCCC 61.741 63.158 0.00 0.00 0.00 5.36
1589 1606 4.603946 GGCGGTATCGGAGGTGCC 62.604 72.222 0.00 0.00 36.79 5.01
1991 2052 4.733371 TGGTGATGAAGCGCGCGA 62.733 61.111 37.18 13.84 0.00 5.87
2146 2207 1.344065 TGTACACGTTCATGGACCCT 58.656 50.000 0.00 0.00 31.77 4.34
2242 2303 4.497006 GCGAGATCTGCAGCAAATTAACAT 60.497 41.667 9.47 0.00 0.00 2.71
2244 2305 4.679662 AGATCTGCAGCAAATTAACATGC 58.320 39.130 9.47 6.26 42.87 4.06
2376 2442 4.218478 GCGTACATGTTCCGCGGC 62.218 66.667 23.51 8.29 37.89 6.53
2431 2497 1.304282 GCTCCATGGGAAGCTCCAA 59.696 57.895 16.35 0.00 40.62 3.53
2465 2539 3.458579 CGCGTCGTCTTGGTGTCG 61.459 66.667 0.00 0.00 0.00 4.35
2494 2568 3.382832 CCGGTGAGGCTCGAGGTT 61.383 66.667 15.58 0.00 0.00 3.50
2598 2681 4.004982 ACGGAATTTATTAGCGTTGTGGT 58.995 39.130 0.00 0.00 0.00 4.16
2599 2682 4.142773 ACGGAATTTATTAGCGTTGTGGTG 60.143 41.667 0.00 0.00 0.00 4.17
2600 2683 4.668289 GGAATTTATTAGCGTTGTGGTGG 58.332 43.478 0.00 0.00 0.00 4.61
2601 2684 3.775661 ATTTATTAGCGTTGTGGTGGC 57.224 42.857 0.00 0.00 0.00 5.01
2602 2685 1.080298 TTATTAGCGTTGTGGTGGCG 58.920 50.000 0.00 0.00 0.00 5.69
2603 2686 0.037139 TATTAGCGTTGTGGTGGCGT 60.037 50.000 0.00 0.00 0.00 5.68
2604 2687 1.296056 ATTAGCGTTGTGGTGGCGTC 61.296 55.000 0.00 0.00 0.00 5.19
2607 2690 2.736995 CGTTGTGGTGGCGTCGAT 60.737 61.111 0.00 0.00 0.00 3.59
2608 2691 2.860293 GTTGTGGTGGCGTCGATG 59.140 61.111 0.00 0.00 0.00 3.84
2609 2692 2.358125 TTGTGGTGGCGTCGATGG 60.358 61.111 6.79 0.00 0.00 3.51
2613 2696 4.501714 GGTGGCGTCGATGGCGTA 62.502 66.667 24.19 6.91 38.98 4.42
2614 2697 2.954868 GTGGCGTCGATGGCGTAG 60.955 66.667 24.19 0.00 38.98 3.51
2615 2698 4.201679 TGGCGTCGATGGCGTAGG 62.202 66.667 24.19 0.00 38.98 3.18
2616 2699 3.896133 GGCGTCGATGGCGTAGGA 61.896 66.667 16.02 0.00 38.98 2.94
2617 2700 2.654404 GCGTCGATGGCGTAGGAC 60.654 66.667 6.79 1.37 38.98 3.85
2618 2701 2.025727 CGTCGATGGCGTAGGACC 59.974 66.667 0.00 0.00 38.98 4.46
2619 2702 2.478890 CGTCGATGGCGTAGGACCT 61.479 63.158 0.00 0.00 38.98 3.85
2620 2703 1.065928 GTCGATGGCGTAGGACCTG 59.934 63.158 3.53 0.00 38.98 4.00
2621 2704 2.279517 CGATGGCGTAGGACCTGC 60.280 66.667 3.53 0.74 0.00 4.85
2622 2705 2.786495 CGATGGCGTAGGACCTGCT 61.786 63.158 3.53 0.00 0.00 4.24
2623 2706 1.452953 CGATGGCGTAGGACCTGCTA 61.453 60.000 3.53 0.00 0.00 3.49
2624 2707 0.750850 GATGGCGTAGGACCTGCTAA 59.249 55.000 3.53 0.00 0.00 3.09
2625 2708 0.753262 ATGGCGTAGGACCTGCTAAG 59.247 55.000 3.53 0.00 0.00 2.18
2626 2709 0.323999 TGGCGTAGGACCTGCTAAGA 60.324 55.000 3.53 0.00 0.00 2.10
2627 2710 1.041437 GGCGTAGGACCTGCTAAGAT 58.959 55.000 3.53 0.00 0.00 2.40
2628 2711 1.413077 GGCGTAGGACCTGCTAAGATT 59.587 52.381 3.53 0.00 0.00 2.40
2629 2712 2.474816 GCGTAGGACCTGCTAAGATTG 58.525 52.381 3.53 0.00 0.00 2.67
2630 2713 2.100916 GCGTAGGACCTGCTAAGATTGA 59.899 50.000 3.53 0.00 0.00 2.57
2631 2714 3.707793 CGTAGGACCTGCTAAGATTGAC 58.292 50.000 3.53 0.00 0.00 3.18
2632 2715 3.130516 CGTAGGACCTGCTAAGATTGACA 59.869 47.826 3.53 0.00 0.00 3.58
2633 2716 3.618690 AGGACCTGCTAAGATTGACAC 57.381 47.619 0.00 0.00 0.00 3.67
2634 2717 2.237392 AGGACCTGCTAAGATTGACACC 59.763 50.000 0.00 0.00 0.00 4.16
2635 2718 2.237392 GGACCTGCTAAGATTGACACCT 59.763 50.000 0.00 0.00 0.00 4.00
2636 2719 3.526534 GACCTGCTAAGATTGACACCTC 58.473 50.000 0.00 0.00 0.00 3.85
2637 2720 2.906389 ACCTGCTAAGATTGACACCTCA 59.094 45.455 0.00 0.00 0.00 3.86
2638 2721 3.327757 ACCTGCTAAGATTGACACCTCAA 59.672 43.478 0.00 0.00 40.77 3.02
2646 2729 3.996921 ATTGACACCTCAATCTGCTCT 57.003 42.857 0.00 0.00 42.54 4.09
2647 2730 2.756840 TGACACCTCAATCTGCTCTG 57.243 50.000 0.00 0.00 0.00 3.35
2648 2731 2.250924 TGACACCTCAATCTGCTCTGA 58.749 47.619 0.00 0.00 0.00 3.27
2649 2732 2.634453 TGACACCTCAATCTGCTCTGAA 59.366 45.455 0.00 0.00 0.00 3.02
2650 2733 3.260740 GACACCTCAATCTGCTCTGAAG 58.739 50.000 0.00 0.00 0.00 3.02
2651 2734 2.902486 ACACCTCAATCTGCTCTGAAGA 59.098 45.455 0.00 0.00 0.00 2.87
2652 2735 3.518705 ACACCTCAATCTGCTCTGAAGAT 59.481 43.478 0.00 0.00 35.89 2.40
2653 2736 3.872182 CACCTCAATCTGCTCTGAAGATG 59.128 47.826 0.00 0.00 34.59 2.90
2654 2737 3.773667 ACCTCAATCTGCTCTGAAGATGA 59.226 43.478 0.00 0.00 34.59 2.92
2655 2738 4.224594 ACCTCAATCTGCTCTGAAGATGAA 59.775 41.667 0.00 0.00 34.59 2.57
2656 2739 4.571580 CCTCAATCTGCTCTGAAGATGAAC 59.428 45.833 0.00 0.00 34.59 3.18
2657 2740 5.417754 TCAATCTGCTCTGAAGATGAACT 57.582 39.130 0.00 0.00 34.59 3.01
2658 2741 6.406737 CCTCAATCTGCTCTGAAGATGAACTA 60.407 42.308 0.00 0.00 34.59 2.24
2659 2742 6.571605 TCAATCTGCTCTGAAGATGAACTAG 58.428 40.000 0.00 0.00 34.59 2.57
2660 2743 6.154192 TCAATCTGCTCTGAAGATGAACTAGT 59.846 38.462 0.00 0.00 34.59 2.57
2661 2744 5.321959 TCTGCTCTGAAGATGAACTAGTG 57.678 43.478 0.00 0.00 0.00 2.74
2662 2745 5.012893 TCTGCTCTGAAGATGAACTAGTGA 58.987 41.667 0.00 0.00 0.00 3.41
2663 2746 5.478332 TCTGCTCTGAAGATGAACTAGTGAA 59.522 40.000 0.00 0.00 0.00 3.18
2664 2747 6.015095 TCTGCTCTGAAGATGAACTAGTGAAA 60.015 38.462 0.00 0.00 0.00 2.69
2665 2748 6.162079 TGCTCTGAAGATGAACTAGTGAAAG 58.838 40.000 0.00 0.00 0.00 2.62
2666 2749 6.015095 TGCTCTGAAGATGAACTAGTGAAAGA 60.015 38.462 0.00 0.00 0.00 2.52
2667 2750 7.041107 GCTCTGAAGATGAACTAGTGAAAGAT 58.959 38.462 0.00 0.00 0.00 2.40
2668 2751 7.010367 GCTCTGAAGATGAACTAGTGAAAGATG 59.990 40.741 0.00 0.00 0.00 2.90
2669 2752 7.326454 TCTGAAGATGAACTAGTGAAAGATGG 58.674 38.462 0.00 0.00 0.00 3.51
2670 2753 5.877012 TGAAGATGAACTAGTGAAAGATGGC 59.123 40.000 0.00 0.00 0.00 4.40
2671 2754 4.437239 AGATGAACTAGTGAAAGATGGCG 58.563 43.478 0.00 0.00 0.00 5.69
2672 2755 2.972625 TGAACTAGTGAAAGATGGCGG 58.027 47.619 0.00 0.00 0.00 6.13
2673 2756 1.666189 GAACTAGTGAAAGATGGCGGC 59.334 52.381 0.00 0.00 0.00 6.53
2674 2757 0.460284 ACTAGTGAAAGATGGCGGCG 60.460 55.000 0.51 0.51 0.00 6.46
2675 2758 0.179111 CTAGTGAAAGATGGCGGCGA 60.179 55.000 12.98 0.00 0.00 5.54
2676 2759 0.464036 TAGTGAAAGATGGCGGCGAT 59.536 50.000 12.98 0.00 0.00 4.58
2677 2760 1.091771 AGTGAAAGATGGCGGCGATG 61.092 55.000 12.98 0.00 0.00 3.84
2678 2761 1.089481 GTGAAAGATGGCGGCGATGA 61.089 55.000 12.98 0.00 0.00 2.92
2679 2762 1.089481 TGAAAGATGGCGGCGATGAC 61.089 55.000 12.98 0.00 0.00 3.06
2680 2763 1.078497 AAAGATGGCGGCGATGACA 60.078 52.632 12.98 3.44 0.00 3.58
2681 2764 1.369091 AAAGATGGCGGCGATGACAC 61.369 55.000 12.98 0.00 0.00 3.67
2682 2765 2.511373 GATGGCGGCGATGACACA 60.511 61.111 12.98 0.00 0.00 3.72
2683 2766 1.889105 GATGGCGGCGATGACACAT 60.889 57.895 12.98 4.14 0.00 3.21
2684 2767 2.109538 GATGGCGGCGATGACACATG 62.110 60.000 12.98 0.00 0.00 3.21
2685 2768 2.819595 GGCGGCGATGACACATGT 60.820 61.111 12.98 0.00 0.00 3.21
2686 2769 2.400798 GCGGCGATGACACATGTG 59.599 61.111 24.25 24.25 0.00 3.21
2687 2770 2.100031 GCGGCGATGACACATGTGA 61.100 57.895 31.94 11.45 0.00 3.58
2688 2771 2.001357 CGGCGATGACACATGTGAG 58.999 57.895 31.94 16.75 0.00 3.51
2689 2772 0.737367 CGGCGATGACACATGTGAGT 60.737 55.000 31.94 16.29 0.00 3.41
2690 2773 0.723414 GGCGATGACACATGTGAGTG 59.277 55.000 31.94 16.30 44.93 3.51
2691 2774 0.095935 GCGATGACACATGTGAGTGC 59.904 55.000 31.94 21.33 43.23 4.40
2692 2775 0.367887 CGATGACACATGTGAGTGCG 59.632 55.000 31.94 22.74 43.23 5.34
2693 2776 1.432514 GATGACACATGTGAGTGCGT 58.567 50.000 31.94 17.56 43.23 5.24
2694 2777 1.391485 GATGACACATGTGAGTGCGTC 59.609 52.381 31.94 21.07 43.23 5.19
2695 2778 0.939106 TGACACATGTGAGTGCGTCG 60.939 55.000 31.94 2.46 43.23 5.12
2696 2779 1.617755 GACACATGTGAGTGCGTCGG 61.618 60.000 31.94 1.66 43.23 4.79
2697 2780 1.372872 CACATGTGAGTGCGTCGGA 60.373 57.895 21.64 0.00 32.04 4.55
2698 2781 1.372997 ACATGTGAGTGCGTCGGAC 60.373 57.895 9.08 9.08 0.00 4.79
2699 2782 1.372872 CATGTGAGTGCGTCGGACA 60.373 57.895 19.45 0.00 0.00 4.02
2700 2783 0.737367 CATGTGAGTGCGTCGGACAT 60.737 55.000 19.45 4.17 0.00 3.06
2701 2784 0.737367 ATGTGAGTGCGTCGGACATG 60.737 55.000 19.45 0.00 0.00 3.21
2702 2785 1.372997 GTGAGTGCGTCGGACATGT 60.373 57.895 19.45 0.00 0.00 3.21
2703 2786 0.944311 GTGAGTGCGTCGGACATGTT 60.944 55.000 19.45 0.00 0.00 2.71
2704 2787 0.249699 TGAGTGCGTCGGACATGTTT 60.250 50.000 19.45 0.00 0.00 2.83
2705 2788 0.163788 GAGTGCGTCGGACATGTTTG 59.836 55.000 19.45 0.00 0.00 2.93
2706 2789 0.531974 AGTGCGTCGGACATGTTTGT 60.532 50.000 19.45 0.00 39.32 2.83
2707 2790 0.384230 GTGCGTCGGACATGTTTGTG 60.384 55.000 12.41 0.00 35.79 3.33
2708 2791 1.440353 GCGTCGGACATGTTTGTGC 60.440 57.895 9.10 0.00 40.51 4.57
2709 2792 1.206578 CGTCGGACATGTTTGTGCC 59.793 57.895 9.10 0.00 40.81 5.01
2710 2793 1.227999 CGTCGGACATGTTTGTGCCT 61.228 55.000 9.10 0.00 40.81 4.75
2711 2794 0.517316 GTCGGACATGTTTGTGCCTC 59.483 55.000 0.00 0.00 40.81 4.70
2712 2795 0.948623 TCGGACATGTTTGTGCCTCG 60.949 55.000 0.00 0.00 40.81 4.63
2713 2796 1.875963 GGACATGTTTGTGCCTCGG 59.124 57.895 0.00 0.00 38.18 4.63
2714 2797 0.605319 GGACATGTTTGTGCCTCGGA 60.605 55.000 0.00 0.00 38.18 4.55
2715 2798 0.517316 GACATGTTTGTGCCTCGGAC 59.483 55.000 0.00 0.00 35.79 4.79
2716 2799 0.889186 ACATGTTTGTGCCTCGGACC 60.889 55.000 0.00 0.00 33.85 4.46
2717 2800 1.303317 ATGTTTGTGCCTCGGACCC 60.303 57.895 0.00 0.00 0.00 4.46
2718 2801 3.047877 GTTTGTGCCTCGGACCCG 61.048 66.667 1.31 1.31 41.35 5.28
2719 2802 4.323477 TTTGTGCCTCGGACCCGG 62.323 66.667 8.73 0.00 40.25 5.73
2721 2804 4.682334 TGTGCCTCGGACCCGGTA 62.682 66.667 8.73 0.00 40.25 4.02
2722 2805 3.834799 GTGCCTCGGACCCGGTAG 61.835 72.222 8.73 0.00 40.25 3.18
2723 2806 4.051167 TGCCTCGGACCCGGTAGA 62.051 66.667 8.73 0.00 40.25 2.59
2724 2807 2.521224 GCCTCGGACCCGGTAGAT 60.521 66.667 8.73 0.00 40.25 1.98
2725 2808 2.857744 GCCTCGGACCCGGTAGATG 61.858 68.421 8.73 0.00 40.25 2.90
2726 2809 2.201022 CCTCGGACCCGGTAGATGG 61.201 68.421 8.73 0.00 40.25 3.51
2727 2810 2.836360 TCGGACCCGGTAGATGGC 60.836 66.667 8.73 0.00 40.25 4.40
2728 2811 2.838225 CGGACCCGGTAGATGGCT 60.838 66.667 0.00 0.00 35.56 4.75
2729 2812 2.857744 CGGACCCGGTAGATGGCTC 61.858 68.421 0.00 0.00 35.56 4.70
2730 2813 2.728817 GACCCGGTAGATGGCTCG 59.271 66.667 0.00 0.00 0.00 5.03
2731 2814 2.838225 ACCCGGTAGATGGCTCGG 60.838 66.667 0.00 0.00 41.90 4.63
2732 2815 2.838225 CCCGGTAGATGGCTCGGT 60.838 66.667 0.00 0.00 40.78 4.69
2733 2816 2.728817 CCGGTAGATGGCTCGGTC 59.271 66.667 0.00 0.00 37.92 4.79
2734 2817 2.125326 CCGGTAGATGGCTCGGTCA 61.125 63.158 0.00 0.00 37.92 4.02
2735 2818 1.360551 CGGTAGATGGCTCGGTCAG 59.639 63.158 0.00 0.00 0.00 3.51
2736 2819 1.742768 GGTAGATGGCTCGGTCAGG 59.257 63.158 0.00 0.00 0.00 3.86
2737 2820 1.742768 GTAGATGGCTCGGTCAGGG 59.257 63.158 0.00 0.00 0.00 4.45
2743 2826 4.821589 GCTCGGTCAGGGCCTTCG 62.822 72.222 1.32 8.97 41.60 3.79
2744 2827 4.148825 CTCGGTCAGGGCCTTCGG 62.149 72.222 1.32 4.97 0.00 4.30
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
41 42 4.982241 TGAAGGAAATATGCCCTAGAGG 57.018 45.455 0.00 0.00 39.47 3.69
42 43 5.704515 CACATGAAGGAAATATGCCCTAGAG 59.295 44.000 0.00 0.00 31.36 2.43
43 44 5.624159 CACATGAAGGAAATATGCCCTAGA 58.376 41.667 0.00 0.00 31.36 2.43
44 45 4.217118 GCACATGAAGGAAATATGCCCTAG 59.783 45.833 0.00 0.00 31.36 3.02
45 46 4.141181 AGCACATGAAGGAAATATGCCCTA 60.141 41.667 0.00 0.00 31.94 3.53
46 47 2.961062 GCACATGAAGGAAATATGCCCT 59.039 45.455 0.00 0.00 0.00 5.19
47 48 2.961062 AGCACATGAAGGAAATATGCCC 59.039 45.455 0.00 0.00 31.94 5.36
48 49 3.005155 GGAGCACATGAAGGAAATATGCC 59.995 47.826 0.00 0.00 31.94 4.40
49 50 3.005155 GGGAGCACATGAAGGAAATATGC 59.995 47.826 0.00 0.00 0.00 3.14
50 51 4.209538 TGGGAGCACATGAAGGAAATATG 58.790 43.478 0.00 0.00 0.00 1.78
51 52 4.467769 CTGGGAGCACATGAAGGAAATAT 58.532 43.478 0.00 0.00 0.00 1.28
52 53 3.889815 CTGGGAGCACATGAAGGAAATA 58.110 45.455 0.00 0.00 0.00 1.40
53 54 2.731572 CTGGGAGCACATGAAGGAAAT 58.268 47.619 0.00 0.00 0.00 2.17
54 55 1.887956 GCTGGGAGCACATGAAGGAAA 60.888 52.381 0.00 0.00 41.89 3.13
55 56 0.322816 GCTGGGAGCACATGAAGGAA 60.323 55.000 0.00 0.00 41.89 3.36
56 57 1.300963 GCTGGGAGCACATGAAGGA 59.699 57.895 0.00 0.00 41.89 3.36
57 58 2.110967 CGCTGGGAGCACATGAAGG 61.111 63.158 0.00 0.00 42.58 3.46
58 59 2.110967 CCGCTGGGAGCACATGAAG 61.111 63.158 0.00 0.00 42.58 3.02
59 60 2.046023 CCGCTGGGAGCACATGAA 60.046 61.111 0.00 0.00 42.58 2.57
60 61 2.592032 TTCCGCTGGGAGCACATGA 61.592 57.895 0.00 0.00 44.98 3.07
61 62 2.046023 TTCCGCTGGGAGCACATG 60.046 61.111 0.00 0.00 44.98 3.21
62 63 2.045926 GTTCCGCTGGGAGCACAT 60.046 61.111 0.00 0.00 44.98 3.21
63 64 4.329545 GGTTCCGCTGGGAGCACA 62.330 66.667 0.00 0.00 44.75 4.57
64 65 3.959991 GAGGTTCCGCTGGGAGCAC 62.960 68.421 7.63 0.00 44.75 4.40
65 66 3.706373 GAGGTTCCGCTGGGAGCA 61.706 66.667 7.63 0.00 44.75 4.26
66 67 4.475135 GGAGGTTCCGCTGGGAGC 62.475 72.222 0.00 0.00 44.98 4.70
67 68 2.685380 AGGAGGTTCCGCTGGGAG 60.685 66.667 0.00 0.00 44.98 4.30
68 69 2.683933 GAGGAGGTTCCGCTGGGA 60.684 66.667 0.00 0.00 42.75 4.37
69 70 3.787001 GGAGGAGGTTCCGCTGGG 61.787 72.222 0.00 0.00 42.75 4.45
70 71 1.842381 AAAGGAGGAGGTTCCGCTGG 61.842 60.000 0.00 0.00 42.75 4.85
71 72 0.036875 AAAAGGAGGAGGTTCCGCTG 59.963 55.000 0.00 0.00 42.75 5.18
72 73 0.325272 GAAAAGGAGGAGGTTCCGCT 59.675 55.000 0.00 0.00 42.75 5.52
73 74 0.325272 AGAAAAGGAGGAGGTTCCGC 59.675 55.000 0.00 0.00 42.75 5.54
74 75 2.861147 AAGAAAAGGAGGAGGTTCCG 57.139 50.000 0.00 0.00 42.75 4.30
94 95 2.420722 ACTGAGGCGACAAAACGAAAAA 59.579 40.909 0.00 0.00 35.09 1.94
95 96 2.011222 ACTGAGGCGACAAAACGAAAA 58.989 42.857 0.00 0.00 35.09 2.29
96 97 1.658994 ACTGAGGCGACAAAACGAAA 58.341 45.000 0.00 0.00 35.09 3.46
97 98 1.658994 AACTGAGGCGACAAAACGAA 58.341 45.000 0.00 0.00 35.09 3.85
98 99 1.658994 AAACTGAGGCGACAAAACGA 58.341 45.000 0.00 0.00 35.09 3.85
99 100 2.468532 AAAACTGAGGCGACAAAACG 57.531 45.000 0.00 0.00 0.00 3.60
100 101 3.113322 GGAAAAACTGAGGCGACAAAAC 58.887 45.455 0.00 0.00 0.00 2.43
101 102 3.020984 AGGAAAAACTGAGGCGACAAAA 58.979 40.909 0.00 0.00 0.00 2.44
102 103 2.650322 AGGAAAAACTGAGGCGACAAA 58.350 42.857 0.00 0.00 0.00 2.83
103 104 2.341846 AGGAAAAACTGAGGCGACAA 57.658 45.000 0.00 0.00 0.00 3.18
104 105 2.341846 AAGGAAAAACTGAGGCGACA 57.658 45.000 0.00 0.00 0.00 4.35
105 106 3.066203 TCAAAAGGAAAAACTGAGGCGAC 59.934 43.478 0.00 0.00 0.00 5.19
106 107 3.066203 GTCAAAAGGAAAAACTGAGGCGA 59.934 43.478 0.00 0.00 0.00 5.54
107 108 3.066760 AGTCAAAAGGAAAAACTGAGGCG 59.933 43.478 0.00 0.00 0.00 5.52
108 109 4.655762 AGTCAAAAGGAAAAACTGAGGC 57.344 40.909 0.00 0.00 0.00 4.70
109 110 6.207691 TCAAGTCAAAAGGAAAAACTGAGG 57.792 37.500 0.00 0.00 0.00 3.86
110 111 7.315890 AGTTCAAGTCAAAAGGAAAAACTGAG 58.684 34.615 0.00 0.00 0.00 3.35
111 112 7.227049 AGTTCAAGTCAAAAGGAAAAACTGA 57.773 32.000 0.00 0.00 0.00 3.41
112 113 7.598493 TCAAGTTCAAGTCAAAAGGAAAAACTG 59.402 33.333 0.00 0.00 0.00 3.16
113 114 7.666623 TCAAGTTCAAGTCAAAAGGAAAAACT 58.333 30.769 0.00 0.00 0.00 2.66
114 115 7.883229 TCAAGTTCAAGTCAAAAGGAAAAAC 57.117 32.000 0.00 0.00 0.00 2.43
115 116 7.386573 GGTTCAAGTTCAAGTCAAAAGGAAAAA 59.613 33.333 0.00 0.00 0.00 1.94
116 117 6.871492 GGTTCAAGTTCAAGTCAAAAGGAAAA 59.129 34.615 0.00 0.00 0.00 2.29
117 118 6.210584 AGGTTCAAGTTCAAGTCAAAAGGAAA 59.789 34.615 0.00 0.00 0.00 3.13
118 119 5.714806 AGGTTCAAGTTCAAGTCAAAAGGAA 59.285 36.000 0.00 0.00 0.00 3.36
119 120 5.125417 CAGGTTCAAGTTCAAGTCAAAAGGA 59.875 40.000 0.00 0.00 0.00 3.36
120 121 5.125417 TCAGGTTCAAGTTCAAGTCAAAAGG 59.875 40.000 0.00 0.00 0.00 3.11
121 122 6.194796 TCAGGTTCAAGTTCAAGTCAAAAG 57.805 37.500 0.00 0.00 0.00 2.27
122 123 5.393027 GCTCAGGTTCAAGTTCAAGTCAAAA 60.393 40.000 0.00 0.00 0.00 2.44
123 124 4.096382 GCTCAGGTTCAAGTTCAAGTCAAA 59.904 41.667 0.00 0.00 0.00 2.69
124 125 3.627577 GCTCAGGTTCAAGTTCAAGTCAA 59.372 43.478 0.00 0.00 0.00 3.18
125 126 3.118261 AGCTCAGGTTCAAGTTCAAGTCA 60.118 43.478 0.00 0.00 0.00 3.41
126 127 3.249559 CAGCTCAGGTTCAAGTTCAAGTC 59.750 47.826 0.00 0.00 0.00 3.01
127 128 3.209410 CAGCTCAGGTTCAAGTTCAAGT 58.791 45.455 0.00 0.00 0.00 3.16
128 129 2.031333 GCAGCTCAGGTTCAAGTTCAAG 60.031 50.000 0.00 0.00 0.00 3.02
129 130 1.949525 GCAGCTCAGGTTCAAGTTCAA 59.050 47.619 0.00 0.00 0.00 2.69
130 131 1.141657 AGCAGCTCAGGTTCAAGTTCA 59.858 47.619 0.00 0.00 0.00 3.18
131 132 1.889545 AGCAGCTCAGGTTCAAGTTC 58.110 50.000 0.00 0.00 0.00 3.01
132 133 2.370189 AGTAGCAGCTCAGGTTCAAGTT 59.630 45.455 0.00 0.00 0.00 2.66
133 134 1.974236 AGTAGCAGCTCAGGTTCAAGT 59.026 47.619 0.00 0.00 0.00 3.16
134 135 2.344950 CAGTAGCAGCTCAGGTTCAAG 58.655 52.381 0.00 0.00 0.00 3.02
135 136 1.609061 GCAGTAGCAGCTCAGGTTCAA 60.609 52.381 0.00 0.00 41.58 2.69
136 137 0.036952 GCAGTAGCAGCTCAGGTTCA 60.037 55.000 0.00 0.00 41.58 3.18
137 138 0.248843 AGCAGTAGCAGCTCAGGTTC 59.751 55.000 0.00 0.00 45.49 3.62
138 139 0.036577 CAGCAGTAGCAGCTCAGGTT 60.037 55.000 0.00 0.00 45.49 3.50
139 140 1.190833 ACAGCAGTAGCAGCTCAGGT 61.191 55.000 0.00 0.00 45.49 4.00
140 141 0.036577 AACAGCAGTAGCAGCTCAGG 60.037 55.000 0.00 0.00 45.49 3.86
141 142 1.077123 CAACAGCAGTAGCAGCTCAG 58.923 55.000 0.00 0.00 45.49 3.35
142 143 0.394192 ACAACAGCAGTAGCAGCTCA 59.606 50.000 0.00 0.00 45.49 4.26
143 144 0.795085 CACAACAGCAGTAGCAGCTC 59.205 55.000 0.00 0.00 45.49 4.09
144 145 0.604780 CCACAACAGCAGTAGCAGCT 60.605 55.000 0.00 0.00 45.49 4.24
145 146 1.580845 CCCACAACAGCAGTAGCAGC 61.581 60.000 0.00 0.00 45.49 5.25
146 147 0.250467 ACCCACAACAGCAGTAGCAG 60.250 55.000 0.00 0.00 45.49 4.24
147 148 0.182537 AACCCACAACAGCAGTAGCA 59.817 50.000 0.00 0.00 45.49 3.49
148 149 0.593128 CAACCCACAACAGCAGTAGC 59.407 55.000 0.00 0.00 42.56 3.58
149 150 1.967319 ACAACCCACAACAGCAGTAG 58.033 50.000 0.00 0.00 0.00 2.57
150 151 2.425312 CAAACAACCCACAACAGCAGTA 59.575 45.455 0.00 0.00 0.00 2.74
151 152 1.204467 CAAACAACCCACAACAGCAGT 59.796 47.619 0.00 0.00 0.00 4.40
152 153 1.476085 TCAAACAACCCACAACAGCAG 59.524 47.619 0.00 0.00 0.00 4.24
153 154 1.550327 TCAAACAACCCACAACAGCA 58.450 45.000 0.00 0.00 0.00 4.41
154 155 2.472816 CATCAAACAACCCACAACAGC 58.527 47.619 0.00 0.00 0.00 4.40
155 156 2.472816 GCATCAAACAACCCACAACAG 58.527 47.619 0.00 0.00 0.00 3.16
156 157 1.202348 CGCATCAAACAACCCACAACA 60.202 47.619 0.00 0.00 0.00 3.33
157 158 1.486439 CGCATCAAACAACCCACAAC 58.514 50.000 0.00 0.00 0.00 3.32
158 159 0.387202 CCGCATCAAACAACCCACAA 59.613 50.000 0.00 0.00 0.00 3.33
159 160 0.466372 TCCGCATCAAACAACCCACA 60.466 50.000 0.00 0.00 0.00 4.17
160 161 0.887933 ATCCGCATCAAACAACCCAC 59.112 50.000 0.00 0.00 0.00 4.61
161 162 0.887247 CATCCGCATCAAACAACCCA 59.113 50.000 0.00 0.00 0.00 4.51
162 163 0.458370 GCATCCGCATCAAACAACCC 60.458 55.000 0.00 0.00 38.36 4.11
163 164 0.527565 AGCATCCGCATCAAACAACC 59.472 50.000 0.00 0.00 42.27 3.77
164 165 2.352503 AAGCATCCGCATCAAACAAC 57.647 45.000 0.00 0.00 42.27 3.32
165 166 4.717233 ATAAAGCATCCGCATCAAACAA 57.283 36.364 0.00 0.00 42.27 2.83
166 167 5.826601 TTATAAAGCATCCGCATCAAACA 57.173 34.783 0.00 0.00 42.27 2.83
181 182 8.294577 GGTTTCACCCCGCTTTATATTATAAAG 58.705 37.037 23.28 23.28 33.75 1.85
182 183 8.168790 GGTTTCACCCCGCTTTATATTATAAA 57.831 34.615 8.26 8.26 30.04 1.40
183 184 7.748691 GGTTTCACCCCGCTTTATATTATAA 57.251 36.000 0.00 0.00 30.04 0.98
199 200 3.786516 TTGACGAAAAAGGGTTTCACC 57.213 42.857 0.00 0.00 37.60 4.02
200 201 5.344884 TCATTTGACGAAAAAGGGTTTCAC 58.655 37.500 0.00 0.00 0.00 3.18
201 202 5.584253 TCATTTGACGAAAAAGGGTTTCA 57.416 34.783 0.00 0.00 0.00 2.69
202 203 6.447162 AGATCATTTGACGAAAAAGGGTTTC 58.553 36.000 0.00 0.00 0.00 2.78
203 204 6.405278 AGATCATTTGACGAAAAAGGGTTT 57.595 33.333 0.00 0.00 0.00 3.27
204 205 6.215845 CAAGATCATTTGACGAAAAAGGGTT 58.784 36.000 0.00 0.00 0.00 4.11
205 206 5.772521 CAAGATCATTTGACGAAAAAGGGT 58.227 37.500 0.00 0.00 0.00 4.34
206 207 4.622740 GCAAGATCATTTGACGAAAAAGGG 59.377 41.667 0.00 0.00 0.00 3.95
207 208 5.464168 AGCAAGATCATTTGACGAAAAAGG 58.536 37.500 0.00 0.00 0.00 3.11
208 209 7.752239 ACATAGCAAGATCATTTGACGAAAAAG 59.248 33.333 0.00 0.00 0.00 2.27
209 210 7.592938 ACATAGCAAGATCATTTGACGAAAAA 58.407 30.769 0.00 0.00 0.00 1.94
210 211 7.144722 ACATAGCAAGATCATTTGACGAAAA 57.855 32.000 0.00 0.00 0.00 2.29
211 212 6.741992 ACATAGCAAGATCATTTGACGAAA 57.258 33.333 0.00 0.00 0.00 3.46
212 213 7.710475 TGATACATAGCAAGATCATTTGACGAA 59.290 33.333 0.00 0.00 0.00 3.85
213 214 7.209475 TGATACATAGCAAGATCATTTGACGA 58.791 34.615 0.00 0.00 0.00 4.20
214 215 7.412137 TGATACATAGCAAGATCATTTGACG 57.588 36.000 0.00 0.00 0.00 4.35
220 221 9.761504 GCATAGTATGATACATAGCAAGATCAT 57.238 33.333 14.52 0.00 40.99 2.45
221 222 8.975295 AGCATAGTATGATACATAGCAAGATCA 58.025 33.333 14.52 0.00 33.09 2.92
225 226 8.976471 GCATAGCATAGTATGATACATAGCAAG 58.024 37.037 14.52 1.70 33.51 4.01
226 227 8.699130 AGCATAGCATAGTATGATACATAGCAA 58.301 33.333 14.52 0.00 33.51 3.91
227 228 8.242729 AGCATAGCATAGTATGATACATAGCA 57.757 34.615 14.52 0.00 33.51 3.49
236 237 9.859152 ACAGATAGATAGCATAGCATAGTATGA 57.141 33.333 14.52 0.00 32.88 2.15
239 240 8.409371 GCAACAGATAGATAGCATAGCATAGTA 58.591 37.037 0.00 0.00 0.00 1.82
240 241 7.093596 TGCAACAGATAGATAGCATAGCATAGT 60.094 37.037 0.00 0.00 0.00 2.12
241 242 7.263496 TGCAACAGATAGATAGCATAGCATAG 58.737 38.462 0.00 0.00 0.00 2.23
242 243 7.174107 TGCAACAGATAGATAGCATAGCATA 57.826 36.000 0.00 0.00 0.00 3.14
243 244 6.046290 TGCAACAGATAGATAGCATAGCAT 57.954 37.500 0.00 0.00 0.00 3.79
244 245 5.473066 TGCAACAGATAGATAGCATAGCA 57.527 39.130 0.00 0.00 0.00 3.49
245 246 5.293814 CCATGCAACAGATAGATAGCATAGC 59.706 44.000 0.00 0.00 40.38 2.97
246 247 6.637657 TCCATGCAACAGATAGATAGCATAG 58.362 40.000 0.00 0.00 40.38 2.23
247 248 6.610075 TCCATGCAACAGATAGATAGCATA 57.390 37.500 0.00 0.00 40.38 3.14
248 249 5.494390 TCCATGCAACAGATAGATAGCAT 57.506 39.130 0.00 0.00 42.82 3.79
249 250 4.961438 TCCATGCAACAGATAGATAGCA 57.039 40.909 0.00 0.00 36.34 3.49
250 251 6.609533 CAATTCCATGCAACAGATAGATAGC 58.390 40.000 0.00 0.00 0.00 2.97
251 252 6.609533 GCAATTCCATGCAACAGATAGATAG 58.390 40.000 0.00 0.00 45.70 2.08
252 253 6.564709 GCAATTCCATGCAACAGATAGATA 57.435 37.500 0.00 0.00 45.70 1.98
253 254 5.449107 GCAATTCCATGCAACAGATAGAT 57.551 39.130 0.00 0.00 45.70 1.98
254 255 4.906065 GCAATTCCATGCAACAGATAGA 57.094 40.909 0.00 0.00 45.70 1.98
264 265 2.940410 CCAAATCCTTGCAATTCCATGC 59.060 45.455 0.00 0.00 46.58 4.06
265 266 4.439057 CTCCAAATCCTTGCAATTCCATG 58.561 43.478 0.00 0.00 0.00 3.66
266 267 3.453353 CCTCCAAATCCTTGCAATTCCAT 59.547 43.478 0.00 0.00 0.00 3.41
267 268 2.833338 CCTCCAAATCCTTGCAATTCCA 59.167 45.455 0.00 0.00 0.00 3.53
268 269 2.833943 ACCTCCAAATCCTTGCAATTCC 59.166 45.455 0.00 0.00 0.00 3.01
269 270 3.766051 AGACCTCCAAATCCTTGCAATTC 59.234 43.478 0.00 0.00 0.00 2.17
270 271 3.512724 CAGACCTCCAAATCCTTGCAATT 59.487 43.478 0.00 0.00 0.00 2.32
271 272 3.094572 CAGACCTCCAAATCCTTGCAAT 58.905 45.455 0.00 0.00 0.00 3.56
272 273 2.517959 CAGACCTCCAAATCCTTGCAA 58.482 47.619 0.00 0.00 0.00 4.08
273 274 1.272092 CCAGACCTCCAAATCCTTGCA 60.272 52.381 0.00 0.00 0.00 4.08
274 275 1.004745 TCCAGACCTCCAAATCCTTGC 59.995 52.381 0.00 0.00 0.00 4.01
275 276 3.659183 ATCCAGACCTCCAAATCCTTG 57.341 47.619 0.00 0.00 0.00 3.61
276 277 4.977739 TCATATCCAGACCTCCAAATCCTT 59.022 41.667 0.00 0.00 0.00 3.36
277 278 4.570926 TCATATCCAGACCTCCAAATCCT 58.429 43.478 0.00 0.00 0.00 3.24
278 279 4.263243 CCTCATATCCAGACCTCCAAATCC 60.263 50.000 0.00 0.00 0.00 3.01
279 280 4.263243 CCCTCATATCCAGACCTCCAAATC 60.263 50.000 0.00 0.00 0.00 2.17
280 281 3.654806 CCCTCATATCCAGACCTCCAAAT 59.345 47.826 0.00 0.00 0.00 2.32
281 282 3.048600 CCCTCATATCCAGACCTCCAAA 58.951 50.000 0.00 0.00 0.00 3.28
282 283 2.694397 CCCTCATATCCAGACCTCCAA 58.306 52.381 0.00 0.00 0.00 3.53
283 284 1.132721 CCCCTCATATCCAGACCTCCA 60.133 57.143 0.00 0.00 0.00 3.86
284 285 1.650528 CCCCTCATATCCAGACCTCC 58.349 60.000 0.00 0.00 0.00 4.30
285 286 1.650528 CCCCCTCATATCCAGACCTC 58.349 60.000 0.00 0.00 0.00 3.85
286 287 3.901761 CCCCCTCATATCCAGACCT 57.098 57.895 0.00 0.00 0.00 3.85
306 307 1.623081 ATTTGTCGTGTACGCAGCCG 61.623 55.000 7.29 0.00 39.60 5.52
307 308 0.179225 CATTTGTCGTGTACGCAGCC 60.179 55.000 7.29 0.00 39.60 4.85
308 309 0.787787 TCATTTGTCGTGTACGCAGC 59.212 50.000 7.29 0.00 39.60 5.25
309 310 2.324860 TCTCATTTGTCGTGTACGCAG 58.675 47.619 7.29 0.00 39.60 5.18
310 311 2.324860 CTCTCATTTGTCGTGTACGCA 58.675 47.619 7.29 0.00 39.60 5.24
311 312 1.654105 CCTCTCATTTGTCGTGTACGC 59.346 52.381 0.00 0.00 39.60 4.42
312 313 2.661675 CACCTCTCATTTGTCGTGTACG 59.338 50.000 0.00 0.00 41.45 3.67
313 314 2.993899 CCACCTCTCATTTGTCGTGTAC 59.006 50.000 0.00 0.00 0.00 2.90
314 315 2.028476 CCCACCTCTCATTTGTCGTGTA 60.028 50.000 0.00 0.00 0.00 2.90
315 316 1.270839 CCCACCTCTCATTTGTCGTGT 60.271 52.381 0.00 0.00 0.00 4.49
316 317 1.442769 CCCACCTCTCATTTGTCGTG 58.557 55.000 0.00 0.00 0.00 4.35
317 318 0.321653 GCCCACCTCTCATTTGTCGT 60.322 55.000 0.00 0.00 0.00 4.34
318 319 1.361668 CGCCCACCTCTCATTTGTCG 61.362 60.000 0.00 0.00 0.00 4.35
319 320 1.026718 CCGCCCACCTCTCATTTGTC 61.027 60.000 0.00 0.00 0.00 3.18
320 321 1.002134 CCGCCCACCTCTCATTTGT 60.002 57.895 0.00 0.00 0.00 2.83
321 322 2.409870 GCCGCCCACCTCTCATTTG 61.410 63.158 0.00 0.00 0.00 2.32
322 323 2.044946 GCCGCCCACCTCTCATTT 60.045 61.111 0.00 0.00 0.00 2.32
323 324 4.115199 GGCCGCCCACCTCTCATT 62.115 66.667 0.00 0.00 0.00 2.57
340 341 2.983761 ATATGTCTGCGGACGCGTCG 62.984 60.000 30.99 25.57 44.83 5.12
341 342 0.040692 TATATGTCTGCGGACGCGTC 60.041 55.000 30.67 30.67 44.83 5.19
342 343 0.040336 CTATATGTCTGCGGACGCGT 60.040 55.000 13.85 13.85 44.83 6.01
343 344 0.729478 CCTATATGTCTGCGGACGCG 60.729 60.000 20.49 3.53 44.83 6.01
344 345 0.388649 CCCTATATGTCTGCGGACGC 60.389 60.000 20.49 10.13 44.83 5.19
345 346 0.243907 CCCCTATATGTCTGCGGACG 59.756 60.000 20.49 5.90 44.83 4.79
346 347 0.608640 CCCCCTATATGTCTGCGGAC 59.391 60.000 19.20 19.20 42.42 4.79
347 348 1.192146 GCCCCCTATATGTCTGCGGA 61.192 60.000 0.00 0.00 0.00 5.54
348 349 1.296715 GCCCCCTATATGTCTGCGG 59.703 63.158 0.00 0.00 0.00 5.69
349 350 0.036952 CTGCCCCCTATATGTCTGCG 60.037 60.000 0.00 0.00 0.00 5.18
350 351 1.352083 TCTGCCCCCTATATGTCTGC 58.648 55.000 0.00 0.00 0.00 4.26
351 352 4.042062 TCAAATCTGCCCCCTATATGTCTG 59.958 45.833 0.00 0.00 0.00 3.51
352 353 4.242811 TCAAATCTGCCCCCTATATGTCT 58.757 43.478 0.00 0.00 0.00 3.41
353 354 4.640771 TCAAATCTGCCCCCTATATGTC 57.359 45.455 0.00 0.00 0.00 3.06
354 355 5.605540 AATCAAATCTGCCCCCTATATGT 57.394 39.130 0.00 0.00 0.00 2.29
355 356 7.286316 GGAATAATCAAATCTGCCCCCTATATG 59.714 40.741 0.00 0.00 0.00 1.78
356 357 7.357471 GGAATAATCAAATCTGCCCCCTATAT 58.643 38.462 0.00 0.00 0.00 0.86
357 358 6.578238 CGGAATAATCAAATCTGCCCCCTATA 60.578 42.308 0.00 0.00 0.00 1.31
358 359 5.583932 GGAATAATCAAATCTGCCCCCTAT 58.416 41.667 0.00 0.00 0.00 2.57
359 360 4.506625 CGGAATAATCAAATCTGCCCCCTA 60.507 45.833 0.00 0.00 0.00 3.53
360 361 3.751893 CGGAATAATCAAATCTGCCCCCT 60.752 47.826 0.00 0.00 0.00 4.79
361 362 2.558359 CGGAATAATCAAATCTGCCCCC 59.442 50.000 0.00 0.00 0.00 5.40
362 363 2.558359 CCGGAATAATCAAATCTGCCCC 59.442 50.000 0.00 0.00 0.00 5.80
363 364 3.222603 ACCGGAATAATCAAATCTGCCC 58.777 45.455 9.46 0.00 0.00 5.36
364 365 4.097892 ACAACCGGAATAATCAAATCTGCC 59.902 41.667 9.46 0.00 0.00 4.85
365 366 5.248870 ACAACCGGAATAATCAAATCTGC 57.751 39.130 9.46 0.00 0.00 4.26
366 367 6.035843 CCAACAACCGGAATAATCAAATCTG 58.964 40.000 9.46 0.00 0.00 2.90
367 368 5.714806 ACCAACAACCGGAATAATCAAATCT 59.285 36.000 9.46 0.00 0.00 2.40
368 369 5.804979 CACCAACAACCGGAATAATCAAATC 59.195 40.000 9.46 0.00 0.00 2.17
369 370 5.719173 CACCAACAACCGGAATAATCAAAT 58.281 37.500 9.46 0.00 0.00 2.32
370 371 4.559704 GCACCAACAACCGGAATAATCAAA 60.560 41.667 9.46 0.00 0.00 2.69
371 372 3.057174 GCACCAACAACCGGAATAATCAA 60.057 43.478 9.46 0.00 0.00 2.57
372 373 2.490115 GCACCAACAACCGGAATAATCA 59.510 45.455 9.46 0.00 0.00 2.57
373 374 2.752903 AGCACCAACAACCGGAATAATC 59.247 45.455 9.46 0.00 0.00 1.75
374 375 2.752903 GAGCACCAACAACCGGAATAAT 59.247 45.455 9.46 0.00 0.00 1.28
375 376 2.156098 GAGCACCAACAACCGGAATAA 58.844 47.619 9.46 0.00 0.00 1.40
376 377 1.349688 AGAGCACCAACAACCGGAATA 59.650 47.619 9.46 0.00 0.00 1.75
377 378 0.110486 AGAGCACCAACAACCGGAAT 59.890 50.000 9.46 0.00 0.00 3.01
378 379 0.759959 TAGAGCACCAACAACCGGAA 59.240 50.000 9.46 0.00 0.00 4.30
379 380 0.759959 TTAGAGCACCAACAACCGGA 59.240 50.000 9.46 0.00 0.00 5.14
380 381 1.600023 TTTAGAGCACCAACAACCGG 58.400 50.000 0.00 0.00 0.00 5.28
381 382 3.915437 ATTTTAGAGCACCAACAACCG 57.085 42.857 0.00 0.00 0.00 4.44
435 436 8.780846 ACTGTGTCGTGTTATTGGATAAATAA 57.219 30.769 0.00 0.00 38.21 1.40
436 437 8.035984 TGACTGTGTCGTGTTATTGGATAAATA 58.964 33.333 0.00 0.00 34.95 1.40
437 438 6.876789 TGACTGTGTCGTGTTATTGGATAAAT 59.123 34.615 0.00 0.00 34.95 1.40
438 439 6.224584 TGACTGTGTCGTGTTATTGGATAAA 58.775 36.000 0.00 0.00 34.95 1.40
439 440 5.785243 TGACTGTGTCGTGTTATTGGATAA 58.215 37.500 0.00 0.00 34.95 1.75
440 441 5.394224 TGACTGTGTCGTGTTATTGGATA 57.606 39.130 0.00 0.00 34.95 2.59
441 442 4.265904 TGACTGTGTCGTGTTATTGGAT 57.734 40.909 0.00 0.00 34.95 3.41
442 443 3.737032 TGACTGTGTCGTGTTATTGGA 57.263 42.857 0.00 0.00 34.95 3.53
443 444 4.690748 AGATTGACTGTGTCGTGTTATTGG 59.309 41.667 0.00 0.00 34.95 3.16
444 445 5.845985 AGATTGACTGTGTCGTGTTATTG 57.154 39.130 0.00 0.00 34.95 1.90
445 446 7.277981 GGAATAGATTGACTGTGTCGTGTTATT 59.722 37.037 0.00 0.00 34.95 1.40
446 447 6.757010 GGAATAGATTGACTGTGTCGTGTTAT 59.243 38.462 0.00 0.00 34.95 1.89
447 448 6.097356 GGAATAGATTGACTGTGTCGTGTTA 58.903 40.000 0.00 0.00 34.95 2.41
448 449 4.929808 GGAATAGATTGACTGTGTCGTGTT 59.070 41.667 0.00 0.00 34.95 3.32
449 450 4.021456 TGGAATAGATTGACTGTGTCGTGT 60.021 41.667 0.00 0.00 34.95 4.49
450 451 4.494484 TGGAATAGATTGACTGTGTCGTG 58.506 43.478 0.00 0.00 34.95 4.35
451 452 4.801330 TGGAATAGATTGACTGTGTCGT 57.199 40.909 0.00 0.00 34.95 4.34
452 453 5.235186 GGAATGGAATAGATTGACTGTGTCG 59.765 44.000 0.00 0.00 34.95 4.35
453 454 6.115446 TGGAATGGAATAGATTGACTGTGTC 58.885 40.000 0.00 0.00 0.00 3.67
454 455 6.065976 TGGAATGGAATAGATTGACTGTGT 57.934 37.500 0.00 0.00 0.00 3.72
455 456 5.530171 CCTGGAATGGAATAGATTGACTGTG 59.470 44.000 0.00 0.00 0.00 3.66
456 457 5.429762 TCCTGGAATGGAATAGATTGACTGT 59.570 40.000 0.00 0.00 32.39 3.55
457 458 5.933617 TCCTGGAATGGAATAGATTGACTG 58.066 41.667 0.00 0.00 32.39 3.51
458 459 5.669447 ACTCCTGGAATGGAATAGATTGACT 59.331 40.000 0.00 0.00 35.43 3.41
459 460 5.934781 ACTCCTGGAATGGAATAGATTGAC 58.065 41.667 0.00 0.00 35.43 3.18
460 461 7.075797 TCTACTCCTGGAATGGAATAGATTGA 58.924 38.462 0.00 0.00 39.23 2.57
461 462 7.308450 TCTACTCCTGGAATGGAATAGATTG 57.692 40.000 0.00 0.00 39.23 2.67
462 463 7.474079 GCTTCTACTCCTGGAATGGAATAGATT 60.474 40.741 4.40 0.00 42.29 2.40
463 464 6.013812 GCTTCTACTCCTGGAATGGAATAGAT 60.014 42.308 4.40 0.00 42.29 1.98
464 465 5.305644 GCTTCTACTCCTGGAATGGAATAGA 59.694 44.000 4.40 0.00 41.44 1.98
465 466 5.512232 GGCTTCTACTCCTGGAATGGAATAG 60.512 48.000 4.40 0.00 37.30 1.73
466 467 4.348168 GGCTTCTACTCCTGGAATGGAATA 59.652 45.833 4.40 0.00 35.43 1.75
467 468 3.137360 GGCTTCTACTCCTGGAATGGAAT 59.863 47.826 4.40 0.00 35.43 3.01
468 469 2.505819 GGCTTCTACTCCTGGAATGGAA 59.494 50.000 3.92 3.92 35.43 3.53
469 470 2.119495 GGCTTCTACTCCTGGAATGGA 58.881 52.381 0.00 0.00 34.52 3.41
470 471 2.122768 AGGCTTCTACTCCTGGAATGG 58.877 52.381 0.00 0.00 0.00 3.16
471 472 3.191078 CAGGCTTCTACTCCTGGAATG 57.809 52.381 0.00 0.00 44.64 2.67
477 478 5.902431 AGATCAATAACAGGCTTCTACTCCT 59.098 40.000 0.00 0.00 0.00 3.69
478 479 5.988561 CAGATCAATAACAGGCTTCTACTCC 59.011 44.000 0.00 0.00 0.00 3.85
479 480 5.465056 GCAGATCAATAACAGGCTTCTACTC 59.535 44.000 0.00 0.00 0.00 2.59
480 481 5.104776 TGCAGATCAATAACAGGCTTCTACT 60.105 40.000 0.00 0.00 0.00 2.57
481 482 5.118990 TGCAGATCAATAACAGGCTTCTAC 58.881 41.667 0.00 0.00 0.00 2.59
482 483 5.357742 TGCAGATCAATAACAGGCTTCTA 57.642 39.130 0.00 0.00 0.00 2.10
483 484 4.226427 TGCAGATCAATAACAGGCTTCT 57.774 40.909 0.00 0.00 0.00 2.85
484 485 4.970662 TTGCAGATCAATAACAGGCTTC 57.029 40.909 0.00 0.00 0.00 3.86
485 486 4.708421 ACATTGCAGATCAATAACAGGCTT 59.292 37.500 0.00 0.00 43.21 4.35
486 487 4.275810 ACATTGCAGATCAATAACAGGCT 58.724 39.130 0.00 0.00 43.21 4.58
487 488 4.644103 ACATTGCAGATCAATAACAGGC 57.356 40.909 0.00 0.00 43.21 4.85
488 489 6.639686 GCATTACATTGCAGATCAATAACAGG 59.360 38.462 0.00 0.00 43.21 4.00
489 490 7.423199 AGCATTACATTGCAGATCAATAACAG 58.577 34.615 0.00 0.00 43.21 3.16
490 491 7.067251 TGAGCATTACATTGCAGATCAATAACA 59.933 33.333 0.00 0.00 43.21 2.41
491 492 7.420002 TGAGCATTACATTGCAGATCAATAAC 58.580 34.615 0.00 0.00 43.21 1.89
492 493 7.571080 TGAGCATTACATTGCAGATCAATAA 57.429 32.000 0.00 0.00 43.21 1.40
493 494 7.571080 TTGAGCATTACATTGCAGATCAATA 57.429 32.000 0.00 0.00 43.21 1.90
494 495 6.459670 TTGAGCATTACATTGCAGATCAAT 57.540 33.333 0.00 0.00 45.82 2.57
495 496 5.900865 TTGAGCATTACATTGCAGATCAA 57.099 34.783 0.00 0.00 45.23 2.57
496 497 5.900865 TTTGAGCATTACATTGCAGATCA 57.099 34.783 0.00 0.00 45.23 2.92
497 498 5.517770 GGTTTTGAGCATTACATTGCAGATC 59.482 40.000 0.00 0.00 45.23 2.75
498 499 5.186409 AGGTTTTGAGCATTACATTGCAGAT 59.814 36.000 0.00 0.00 45.23 2.90
499 500 4.523943 AGGTTTTGAGCATTACATTGCAGA 59.476 37.500 0.00 0.00 45.23 4.26
500 501 4.624024 CAGGTTTTGAGCATTACATTGCAG 59.376 41.667 0.00 0.00 45.23 4.41
501 502 4.280425 TCAGGTTTTGAGCATTACATTGCA 59.720 37.500 0.00 0.00 45.23 4.08
502 503 4.622740 GTCAGGTTTTGAGCATTACATTGC 59.377 41.667 0.00 0.00 43.09 3.56
503 504 4.853196 CGTCAGGTTTTGAGCATTACATTG 59.147 41.667 0.00 0.00 36.21 2.82
504 505 4.759693 TCGTCAGGTTTTGAGCATTACATT 59.240 37.500 0.00 0.00 36.21 2.71
505 506 4.323417 TCGTCAGGTTTTGAGCATTACAT 58.677 39.130 0.00 0.00 36.21 2.29
506 507 3.734463 TCGTCAGGTTTTGAGCATTACA 58.266 40.909 0.00 0.00 36.21 2.41
507 508 4.391830 TCATCGTCAGGTTTTGAGCATTAC 59.608 41.667 0.00 0.00 36.21 1.89
520 521 4.100529 GCATGACAAATTTCATCGTCAGG 58.899 43.478 13.60 13.60 41.36 3.86
529 530 8.673626 TTATCTCTTTTCGCATGACAAATTTC 57.326 30.769 0.00 0.00 0.00 2.17
545 546 7.889469 ACACAAGCATGACAATTTATCTCTTT 58.111 30.769 0.00 0.00 0.00 2.52
553 554 7.701539 TCCTTATACACAAGCATGACAATTT 57.298 32.000 0.00 0.00 0.00 1.82
635 645 9.056005 ACATATACAATTGATCGTTGTAGCATT 57.944 29.630 20.94 11.73 43.10 3.56
649 659 7.076842 GATCCCGATCCAACATATACAATTG 57.923 40.000 3.24 3.24 31.76 2.32
677 688 4.814294 CTGACGCGCCCAGGTACC 62.814 72.222 18.07 2.73 0.00 3.34
685 696 0.855349 CATCTAACATCTGACGCGCC 59.145 55.000 5.73 0.00 0.00 6.53
688 699 6.477033 ACTTCAATACATCTAACATCTGACGC 59.523 38.462 0.00 0.00 0.00 5.19
707 723 9.884636 TCGATAGGAATCAATAAAGAACTTCAA 57.115 29.630 0.00 0.00 31.93 2.69
802 819 1.000233 CACAGTTCAATGCACGCTGC 61.000 55.000 0.00 3.44 45.29 5.25
839 856 5.067805 GTCCTCTTTTCCAAGTGATTGTGTT 59.932 40.000 0.00 0.00 0.00 3.32
912 929 4.627447 ACGGCGTGCGTGTTCGTA 62.627 61.111 13.76 0.00 39.49 3.43
1365 1382 0.095935 CGCTCATGTTCAAGAAGGCG 59.904 55.000 0.00 0.00 35.75 5.52
1749 1766 2.159226 GCTCAGCTACGTGTCCAACTAT 60.159 50.000 0.00 0.00 0.00 2.12
1991 2052 4.873129 CTACGCGGCGCTCATGGT 62.873 66.667 30.54 21.31 0.00 3.55
2146 2207 2.592993 GCAGGTGGAGGTACTGGCA 61.593 63.158 0.00 0.00 41.55 4.92
2244 2305 0.040514 CCGATCGTGCTCTAGCTGAG 60.041 60.000 15.09 2.39 45.33 3.35
2409 2475 2.892425 GCTTCCCATGGAGCGACG 60.892 66.667 15.22 0.59 31.21 5.12
2477 2551 1.601419 TTAACCTCGAGCCTCACCGG 61.601 60.000 6.99 0.00 0.00 5.28
2478 2552 0.179134 CTTAACCTCGAGCCTCACCG 60.179 60.000 6.99 0.00 0.00 4.94
2479 2553 0.896226 ACTTAACCTCGAGCCTCACC 59.104 55.000 6.99 0.00 0.00 4.02
2480 2554 4.579753 ACTATACTTAACCTCGAGCCTCAC 59.420 45.833 6.99 0.00 0.00 3.51
2481 2555 4.579340 CACTATACTTAACCTCGAGCCTCA 59.421 45.833 6.99 0.00 0.00 3.86
2482 2556 4.579753 ACACTATACTTAACCTCGAGCCTC 59.420 45.833 6.99 0.00 0.00 4.70
2483 2557 4.534797 ACACTATACTTAACCTCGAGCCT 58.465 43.478 6.99 0.00 0.00 4.58
2484 2558 4.915158 ACACTATACTTAACCTCGAGCC 57.085 45.455 6.99 0.00 0.00 4.70
2485 2559 6.073112 CCTCTACACTATACTTAACCTCGAGC 60.073 46.154 6.99 0.00 0.00 5.03
2486 2560 6.991531 ACCTCTACACTATACTTAACCTCGAG 59.008 42.308 5.13 5.13 0.00 4.04
2487 2561 6.893583 ACCTCTACACTATACTTAACCTCGA 58.106 40.000 0.00 0.00 0.00 4.04
2488 2562 7.565323 AACCTCTACACTATACTTAACCTCG 57.435 40.000 0.00 0.00 0.00 4.63
2490 2564 8.911965 GCTAAACCTCTACACTATACTTAACCT 58.088 37.037 0.00 0.00 0.00 3.50
2573 2656 6.183360 ACCACAACGCTAATAAATTCCGTAAG 60.183 38.462 2.94 2.73 30.98 2.34
2576 2659 4.004982 ACCACAACGCTAATAAATTCCGT 58.995 39.130 0.00 0.00 31.98 4.69
2578 2661 4.668289 CCACCACAACGCTAATAAATTCC 58.332 43.478 0.00 0.00 0.00 3.01
2579 2662 4.102649 GCCACCACAACGCTAATAAATTC 58.897 43.478 0.00 0.00 0.00 2.17
2580 2663 3.426963 CGCCACCACAACGCTAATAAATT 60.427 43.478 0.00 0.00 0.00 1.82
2581 2664 2.096819 CGCCACCACAACGCTAATAAAT 59.903 45.455 0.00 0.00 0.00 1.40
2584 2667 0.037139 ACGCCACCACAACGCTAATA 60.037 50.000 0.00 0.00 0.00 0.98
2598 2681 4.201679 CCTACGCCATCGACGCCA 62.202 66.667 0.00 0.00 39.41 5.69
2599 2682 3.896133 TCCTACGCCATCGACGCC 61.896 66.667 0.00 0.00 39.41 5.68
2600 2683 2.654404 GTCCTACGCCATCGACGC 60.654 66.667 0.00 0.00 39.41 5.19
2601 2684 2.025727 GGTCCTACGCCATCGACG 59.974 66.667 0.00 0.00 39.41 5.12
2602 2685 1.065928 CAGGTCCTACGCCATCGAC 59.934 63.158 0.00 0.00 39.41 4.20
2603 2686 2.782222 GCAGGTCCTACGCCATCGA 61.782 63.158 0.00 0.00 39.41 3.59
2604 2687 1.452953 TAGCAGGTCCTACGCCATCG 61.453 60.000 0.00 0.00 42.43 3.84
2605 2688 0.750850 TTAGCAGGTCCTACGCCATC 59.249 55.000 0.00 0.00 0.00 3.51
2606 2689 0.753262 CTTAGCAGGTCCTACGCCAT 59.247 55.000 0.00 0.00 0.00 4.40
2607 2690 0.323999 TCTTAGCAGGTCCTACGCCA 60.324 55.000 0.00 0.00 0.00 5.69
2608 2691 1.041437 ATCTTAGCAGGTCCTACGCC 58.959 55.000 0.00 0.00 0.00 5.68
2609 2692 2.100916 TCAATCTTAGCAGGTCCTACGC 59.899 50.000 0.00 0.00 0.00 4.42
2610 2693 3.130516 TGTCAATCTTAGCAGGTCCTACG 59.869 47.826 0.00 0.00 0.00 3.51
2611 2694 4.434520 GTGTCAATCTTAGCAGGTCCTAC 58.565 47.826 0.00 0.00 0.00 3.18
2612 2695 3.451178 GGTGTCAATCTTAGCAGGTCCTA 59.549 47.826 0.00 0.00 0.00 2.94
2613 2696 2.237392 GGTGTCAATCTTAGCAGGTCCT 59.763 50.000 0.00 0.00 0.00 3.85
2614 2697 2.237392 AGGTGTCAATCTTAGCAGGTCC 59.763 50.000 0.00 0.00 0.00 4.46
2615 2698 3.055819 TGAGGTGTCAATCTTAGCAGGTC 60.056 47.826 0.00 0.00 0.00 3.85
2616 2699 2.906389 TGAGGTGTCAATCTTAGCAGGT 59.094 45.455 0.00 0.00 0.00 4.00
2617 2700 3.616956 TGAGGTGTCAATCTTAGCAGG 57.383 47.619 0.00 0.00 0.00 4.85
2627 2710 2.634453 TCAGAGCAGATTGAGGTGTCAA 59.366 45.455 0.00 0.00 46.81 3.18
2628 2711 2.250924 TCAGAGCAGATTGAGGTGTCA 58.749 47.619 0.00 0.00 0.00 3.58
2629 2712 3.056250 TCTTCAGAGCAGATTGAGGTGTC 60.056 47.826 0.00 0.00 0.00 3.67
2630 2713 2.902486 TCTTCAGAGCAGATTGAGGTGT 59.098 45.455 0.00 0.00 0.00 4.16
2631 2714 3.606595 TCTTCAGAGCAGATTGAGGTG 57.393 47.619 0.00 0.00 0.00 4.00
2632 2715 3.773667 TCATCTTCAGAGCAGATTGAGGT 59.226 43.478 0.00 0.00 0.00 3.85
2633 2716 4.403585 TCATCTTCAGAGCAGATTGAGG 57.596 45.455 0.00 0.00 0.00 3.86
2634 2717 5.421277 AGTTCATCTTCAGAGCAGATTGAG 58.579 41.667 0.00 0.00 0.00 3.02
2635 2718 5.417754 AGTTCATCTTCAGAGCAGATTGA 57.582 39.130 0.00 0.00 0.00 2.57
2636 2719 6.256104 CACTAGTTCATCTTCAGAGCAGATTG 59.744 42.308 0.00 0.00 0.00 2.67
2637 2720 6.154192 TCACTAGTTCATCTTCAGAGCAGATT 59.846 38.462 0.00 0.00 0.00 2.40
2638 2721 5.655974 TCACTAGTTCATCTTCAGAGCAGAT 59.344 40.000 0.00 0.00 0.00 2.90
2639 2722 5.012893 TCACTAGTTCATCTTCAGAGCAGA 58.987 41.667 0.00 0.00 0.00 4.26
2640 2723 5.321959 TCACTAGTTCATCTTCAGAGCAG 57.678 43.478 0.00 0.00 0.00 4.24
2641 2724 5.728637 TTCACTAGTTCATCTTCAGAGCA 57.271 39.130 0.00 0.00 0.00 4.26
2642 2725 6.393990 TCTTTCACTAGTTCATCTTCAGAGC 58.606 40.000 0.00 0.00 0.00 4.09
2643 2726 7.492020 CCATCTTTCACTAGTTCATCTTCAGAG 59.508 40.741 0.00 0.00 0.00 3.35
2644 2727 7.326454 CCATCTTTCACTAGTTCATCTTCAGA 58.674 38.462 0.00 0.00 0.00 3.27
2645 2728 6.036953 GCCATCTTTCACTAGTTCATCTTCAG 59.963 42.308 0.00 0.00 0.00 3.02
2646 2729 5.877012 GCCATCTTTCACTAGTTCATCTTCA 59.123 40.000 0.00 0.00 0.00 3.02
2647 2730 5.006165 CGCCATCTTTCACTAGTTCATCTTC 59.994 44.000 0.00 0.00 0.00 2.87
2648 2731 4.872691 CGCCATCTTTCACTAGTTCATCTT 59.127 41.667 0.00 0.00 0.00 2.40
2649 2732 4.437239 CGCCATCTTTCACTAGTTCATCT 58.563 43.478 0.00 0.00 0.00 2.90
2650 2733 3.557595 CCGCCATCTTTCACTAGTTCATC 59.442 47.826 0.00 0.00 0.00 2.92
2651 2734 3.535561 CCGCCATCTTTCACTAGTTCAT 58.464 45.455 0.00 0.00 0.00 2.57
2652 2735 2.935238 GCCGCCATCTTTCACTAGTTCA 60.935 50.000 0.00 0.00 0.00 3.18
2653 2736 1.666189 GCCGCCATCTTTCACTAGTTC 59.334 52.381 0.00 0.00 0.00 3.01
2654 2737 1.739067 GCCGCCATCTTTCACTAGTT 58.261 50.000 0.00 0.00 0.00 2.24
2655 2738 0.460284 CGCCGCCATCTTTCACTAGT 60.460 55.000 0.00 0.00 0.00 2.57
2656 2739 0.179111 TCGCCGCCATCTTTCACTAG 60.179 55.000 0.00 0.00 0.00 2.57
2657 2740 0.464036 ATCGCCGCCATCTTTCACTA 59.536 50.000 0.00 0.00 0.00 2.74
2658 2741 1.091771 CATCGCCGCCATCTTTCACT 61.092 55.000 0.00 0.00 0.00 3.41
2659 2742 1.089481 TCATCGCCGCCATCTTTCAC 61.089 55.000 0.00 0.00 0.00 3.18
2660 2743 1.089481 GTCATCGCCGCCATCTTTCA 61.089 55.000 0.00 0.00 0.00 2.69
2661 2744 1.089481 TGTCATCGCCGCCATCTTTC 61.089 55.000 0.00 0.00 0.00 2.62
2662 2745 1.078497 TGTCATCGCCGCCATCTTT 60.078 52.632 0.00 0.00 0.00 2.52
2663 2746 1.815421 GTGTCATCGCCGCCATCTT 60.815 57.895 0.00 0.00 0.00 2.40
2664 2747 2.202932 GTGTCATCGCCGCCATCT 60.203 61.111 0.00 0.00 0.00 2.90
2665 2748 1.889105 ATGTGTCATCGCCGCCATC 60.889 57.895 0.00 0.00 0.00 3.51
2666 2749 2.182181 CATGTGTCATCGCCGCCAT 61.182 57.895 0.00 0.00 0.00 4.40
2667 2750 2.819154 CATGTGTCATCGCCGCCA 60.819 61.111 0.00 0.00 0.00 5.69
2668 2751 2.819595 ACATGTGTCATCGCCGCC 60.820 61.111 0.00 0.00 0.00 6.13
2669 2752 2.028766 CTCACATGTGTCATCGCCGC 62.029 60.000 24.63 0.00 0.00 6.53
2670 2753 0.737367 ACTCACATGTGTCATCGCCG 60.737 55.000 24.63 7.45 0.00 6.46
2671 2754 0.723414 CACTCACATGTGTCATCGCC 59.277 55.000 24.63 0.00 33.61 5.54
2672 2755 0.095935 GCACTCACATGTGTCATCGC 59.904 55.000 24.63 16.65 39.89 4.58
2673 2756 0.367887 CGCACTCACATGTGTCATCG 59.632 55.000 24.63 18.77 39.89 3.84
2674 2757 1.432514 ACGCACTCACATGTGTCATC 58.567 50.000 24.63 12.06 39.03 2.92
2675 2758 3.612517 ACGCACTCACATGTGTCAT 57.387 47.368 24.63 9.32 39.03 3.06
2678 2761 1.664649 CCGACGCACTCACATGTGT 60.665 57.895 24.63 4.84 45.84 3.72
2679 2762 1.372872 TCCGACGCACTCACATGTG 60.373 57.895 20.18 20.18 40.62 3.21
2680 2763 1.372997 GTCCGACGCACTCACATGT 60.373 57.895 0.00 0.00 0.00 3.21
2681 2764 0.737367 ATGTCCGACGCACTCACATG 60.737 55.000 0.00 0.00 0.00 3.21
2682 2765 0.737367 CATGTCCGACGCACTCACAT 60.737 55.000 0.00 0.00 0.00 3.21
2683 2766 1.372872 CATGTCCGACGCACTCACA 60.373 57.895 0.00 0.00 0.00 3.58
2684 2767 0.944311 AACATGTCCGACGCACTCAC 60.944 55.000 0.00 0.00 0.00 3.51
2685 2768 0.249699 AAACATGTCCGACGCACTCA 60.250 50.000 0.00 0.00 0.00 3.41
2686 2769 0.163788 CAAACATGTCCGACGCACTC 59.836 55.000 0.00 0.00 0.00 3.51
2687 2770 0.531974 ACAAACATGTCCGACGCACT 60.532 50.000 0.00 0.00 0.00 4.40
2688 2771 0.384230 CACAAACATGTCCGACGCAC 60.384 55.000 0.00 0.00 0.00 5.34
2689 2772 1.938125 CACAAACATGTCCGACGCA 59.062 52.632 0.00 0.00 0.00 5.24
2690 2773 1.440353 GCACAAACATGTCCGACGC 60.440 57.895 0.00 0.00 0.00 5.19
2691 2774 1.206578 GGCACAAACATGTCCGACG 59.793 57.895 0.00 0.00 0.00 5.12
2692 2775 0.517316 GAGGCACAAACATGTCCGAC 59.483 55.000 0.00 0.00 0.00 4.79
2693 2776 0.948623 CGAGGCACAAACATGTCCGA 60.949 55.000 0.00 0.00 0.00 4.55
2694 2777 1.497278 CGAGGCACAAACATGTCCG 59.503 57.895 0.00 0.00 0.00 4.79
2695 2778 0.605319 TCCGAGGCACAAACATGTCC 60.605 55.000 0.00 0.00 0.00 4.02
2696 2779 0.517316 GTCCGAGGCACAAACATGTC 59.483 55.000 0.00 0.00 0.00 3.06
2697 2780 0.889186 GGTCCGAGGCACAAACATGT 60.889 55.000 0.00 0.00 0.00 3.21
2698 2781 1.586154 GGGTCCGAGGCACAAACATG 61.586 60.000 0.00 0.00 0.00 3.21
2699 2782 1.303317 GGGTCCGAGGCACAAACAT 60.303 57.895 0.00 0.00 0.00 2.71
2700 2783 2.112297 GGGTCCGAGGCACAAACA 59.888 61.111 0.00 0.00 0.00 2.83
2701 2784 3.047877 CGGGTCCGAGGCACAAAC 61.048 66.667 2.83 0.00 42.83 2.93
2702 2785 4.323477 CCGGGTCCGAGGCACAAA 62.323 66.667 11.39 0.00 42.83 2.83
2704 2787 4.682334 TACCGGGTCCGAGGCACA 62.682 66.667 11.39 0.00 42.83 4.57
2705 2788 3.834799 CTACCGGGTCCGAGGCAC 61.835 72.222 11.39 0.00 42.83 5.01
2706 2789 3.369410 ATCTACCGGGTCCGAGGCA 62.369 63.158 11.39 0.00 42.83 4.75
2707 2790 2.521224 ATCTACCGGGTCCGAGGC 60.521 66.667 11.39 0.00 42.83 4.70
2708 2791 2.201022 CCATCTACCGGGTCCGAGG 61.201 68.421 11.39 3.40 42.83 4.63
2709 2792 2.857744 GCCATCTACCGGGTCCGAG 61.858 68.421 11.39 0.00 42.83 4.63
2710 2793 2.836360 GCCATCTACCGGGTCCGA 60.836 66.667 11.39 1.73 42.83 4.55
2711 2794 2.838225 AGCCATCTACCGGGTCCG 60.838 66.667 6.32 1.86 39.44 4.79
2712 2795 2.857744 CGAGCCATCTACCGGGTCC 61.858 68.421 6.32 0.00 46.21 4.46
2713 2796 2.728817 CGAGCCATCTACCGGGTC 59.271 66.667 6.32 0.00 45.62 4.46
2714 2797 2.838225 CCGAGCCATCTACCGGGT 60.838 66.667 6.32 4.46 38.42 5.28
2715 2798 2.838225 ACCGAGCCATCTACCGGG 60.838 66.667 6.32 0.00 45.63 5.73
2716 2799 2.076622 CTGACCGAGCCATCTACCGG 62.077 65.000 0.00 0.00 46.65 5.28
2717 2800 1.360551 CTGACCGAGCCATCTACCG 59.639 63.158 0.00 0.00 0.00 4.02
2718 2801 1.742768 CCTGACCGAGCCATCTACC 59.257 63.158 0.00 0.00 0.00 3.18
2719 2802 1.742768 CCCTGACCGAGCCATCTAC 59.257 63.158 0.00 0.00 0.00 2.59
2720 2803 2.134287 GCCCTGACCGAGCCATCTA 61.134 63.158 0.00 0.00 0.00 1.98
2721 2804 3.474570 GCCCTGACCGAGCCATCT 61.475 66.667 0.00 0.00 0.00 2.90
2722 2805 4.554036 GGCCCTGACCGAGCCATC 62.554 72.222 0.00 0.00 46.34 3.51
2726 2809 4.821589 CGAAGGCCCTGACCGAGC 62.822 72.222 0.00 0.00 33.69 5.03
2727 2810 4.148825 CCGAAGGCCCTGACCGAG 62.149 72.222 0.00 0.00 46.14 4.63


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.