Multiple sequence alignment - TraesCS4B01G062600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G062600 chr4B 100.000 6259 0 0 1 6259 54351496 54345238 0.000000e+00 11559.0
1 TraesCS4B01G062600 chr4B 85.919 1186 125 25 4155 5320 54139026 54137863 0.000000e+00 1227.0
2 TraesCS4B01G062600 chr4B 84.851 1076 130 24 2093 3154 54140311 54139255 0.000000e+00 1053.0
3 TraesCS4B01G062600 chr4B 82.251 1217 146 47 1981 3149 54039390 54038196 0.000000e+00 987.0
4 TraesCS4B01G062600 chr4B 98.753 401 5 0 1597 1997 54041166 54040766 0.000000e+00 713.0
5 TraesCS4B01G062600 chr4B 84.802 454 60 8 4787 5233 54037081 54036630 1.240000e-121 448.0
6 TraesCS4B01G062600 chr4B 78.219 629 106 18 5382 5987 165028467 165027847 2.130000e-99 374.0
7 TraesCS4B01G062600 chr4B 95.455 220 10 0 3742 3961 231275283 231275502 9.980000e-93 351.0
8 TraesCS4B01G062600 chr4A 91.478 2300 132 30 3958 6234 564973209 564975467 0.000000e+00 3103.0
9 TraesCS4B01G062600 chr4A 87.847 1226 116 20 2045 3242 564971712 564972932 0.000000e+00 1408.0
10 TraesCS4B01G062600 chr4A 81.881 1446 166 36 2091 3502 565041070 565042453 0.000000e+00 1131.0
11 TraesCS4B01G062600 chr4A 84.154 1218 124 39 4131 5320 565042479 565043655 0.000000e+00 1116.0
12 TraesCS4B01G062600 chr4A 81.282 1154 156 41 2000 3114 565302716 565303848 0.000000e+00 880.0
13 TraesCS4B01G062600 chr4A 81.466 491 45 25 847 1320 564971122 564971583 1.660000e-95 361.0
14 TraesCS4B01G062600 chr4A 88.364 275 15 5 1325 1598 564971650 564971908 1.310000e-81 315.0
15 TraesCS4B01G062600 chr4A 80.523 421 67 10 4815 5233 565305165 565305572 6.090000e-80 309.0
16 TraesCS4B01G062600 chr4A 88.839 224 11 8 3536 3757 737297032 737296821 4.810000e-66 263.0
17 TraesCS4B01G062600 chr4A 90.047 211 8 3 3537 3745 734346903 734346704 1.730000e-65 261.0
18 TraesCS4B01G062600 chr4A 81.957 327 24 9 1701 1999 565302344 565302663 1.740000e-60 244.0
19 TraesCS4B01G062600 chr4A 83.830 235 27 9 2770 3004 191358317 191358540 4.920000e-51 213.0
20 TraesCS4B01G062600 chr4A 83.491 212 23 7 3531 3741 645783102 645783302 2.980000e-43 187.0
21 TraesCS4B01G062600 chr4D 94.612 1559 73 6 4140 5693 37254259 37252707 0.000000e+00 2403.0
22 TraesCS4B01G062600 chr4D 85.738 1213 129 25 4130 5320 37136093 37134903 0.000000e+00 1242.0
23 TraesCS4B01G062600 chr4D 82.714 1319 139 42 2220 3502 37137384 37136119 0.000000e+00 1090.0
24 TraesCS4B01G062600 chr4D 90.743 713 55 8 2187 2896 37262467 37261763 0.000000e+00 941.0
25 TraesCS4B01G062600 chr4D 80.499 1082 153 42 2072 3114 37052050 37050988 0.000000e+00 776.0
26 TraesCS4B01G062600 chr4D 87.636 550 55 11 5695 6237 37232395 37231852 1.480000e-175 627.0
27 TraesCS4B01G062600 chr4D 89.096 376 19 8 2891 3244 37256827 37256452 1.240000e-121 448.0
28 TraesCS4B01G062600 chr4D 86.104 367 25 9 770 1125 37263544 37263193 7.660000e-99 372.0
29 TraesCS4B01G062600 chr4D 81.637 452 75 7 4787 5233 37049785 37049337 9.910000e-98 368.0
30 TraesCS4B01G062600 chr4D 91.429 210 11 1 1325 1527 37263105 37262896 1.330000e-71 281.0
31 TraesCS4B01G062600 chr4D 97.143 105 3 0 1597 1701 37052465 37052361 1.790000e-40 178.0
32 TraesCS4B01G062600 chr4D 92.405 79 5 1 1520 1598 37262494 37262417 1.840000e-20 111.0
33 TraesCS4B01G062600 chr4D 85.294 68 0 1 688 755 37263599 37263542 1.880000e-05 62.1
34 TraesCS4B01G062600 chr7A 87.168 904 84 20 5351 6237 571328483 571327595 0.000000e+00 998.0
35 TraesCS4B01G062600 chr7A 79.585 578 101 12 5351 5919 158195329 158194760 1.260000e-106 398.0
36 TraesCS4B01G062600 chr7A 95.455 220 10 0 3742 3961 648554078 648553859 9.980000e-93 351.0
37 TraesCS4B01G062600 chr7A 94.323 229 11 2 3742 3969 717947100 717946873 3.590000e-92 350.0
38 TraesCS4B01G062600 chr3A 86.688 631 75 5 5351 5973 655537600 655536971 0.000000e+00 691.0
39 TraesCS4B01G062600 chr3D 85.345 580 58 10 1 556 553330982 553331558 5.440000e-160 575.0
40 TraesCS4B01G062600 chr6B 82.972 646 95 10 5355 5989 693040984 693041625 2.530000e-158 569.0
41 TraesCS4B01G062600 chr6B 79.899 597 87 20 5412 5985 319532277 319532863 2.100000e-109 407.0
42 TraesCS4B01G062600 chr5D 84.629 579 62 10 1 555 210775729 210775154 9.170000e-153 551.0
43 TraesCS4B01G062600 chr5D 83.296 449 53 11 105 552 15127745 15127318 1.640000e-105 394.0
44 TraesCS4B01G062600 chr5D 90.789 76 6 1 567 641 15127329 15127254 3.990000e-17 100.0
45 TraesCS4B01G062600 chr6A 84.948 578 40 16 1 557 183263408 183262857 5.520000e-150 542.0
46 TraesCS4B01G062600 chr6A 84.127 441 57 8 5341 5772 578439004 578439440 1.260000e-111 414.0
47 TraesCS4B01G062600 chr6A 95.455 220 10 0 3742 3961 559750432 559750651 9.980000e-93 351.0
48 TraesCS4B01G062600 chr6A 95.023 221 7 4 3742 3961 15569995 15570212 1.670000e-90 344.0
49 TraesCS4B01G062600 chr6A 96.471 85 3 0 556 640 183262884 183262800 2.350000e-29 141.0
50 TraesCS4B01G062600 chr6D 84.369 563 74 9 1 556 460806466 460807021 1.990000e-149 540.0
51 TraesCS4B01G062600 chr6D 90.141 213 9 6 3533 3745 64928842 64928642 3.720000e-67 267.0
52 TraesCS4B01G062600 chr2B 89.666 329 34 0 105 433 535642650 535642978 2.700000e-113 420.0
53 TraesCS4B01G062600 chr2B 89.666 329 34 0 105 433 535662136 535662464 2.700000e-113 420.0
54 TraesCS4B01G062600 chr2B 95.455 220 9 1 3742 3961 128593851 128593633 3.590000e-92 350.0
55 TraesCS4B01G062600 chr2B 95.434 219 8 2 3742 3960 798491543 798491759 1.290000e-91 348.0
56 TraesCS4B01G062600 chr2B 93.886 229 14 0 3742 3970 174790762 174790990 4.640000e-91 346.0
57 TraesCS4B01G062600 chr2B 81.215 362 58 7 5413 5768 558262713 558263070 3.690000e-72 283.0
58 TraesCS4B01G062600 chr2B 91.905 210 4 7 3537 3745 78097329 78097526 1.330000e-71 281.0
59 TraesCS4B01G062600 chr2B 91.469 211 6 2 3537 3746 800511645 800511844 4.780000e-71 279.0
60 TraesCS4B01G062600 chr2B 91.429 210 6 2 3537 3745 800511321 800511519 1.720000e-70 278.0
61 TraesCS4B01G062600 chr2B 90.278 144 14 0 280 423 535642999 535643142 8.280000e-44 189.0
62 TraesCS4B01G062600 chr2B 95.349 86 4 0 556 641 535698356 535698441 3.040000e-28 137.0
63 TraesCS4B01G062600 chr2B 95.000 60 2 1 5351 5410 558280163 558280221 6.680000e-15 93.5
64 TraesCS4B01G062600 chr7B 84.579 428 57 7 127 552 606128861 606129281 3.490000e-112 416.0
65 TraesCS4B01G062600 chr7B 88.626 211 12 7 3537 3745 649454300 649454100 4.850000e-61 246.0
66 TraesCS4B01G062600 chr7B 88.626 211 10 4 3537 3745 685195775 685195577 1.740000e-60 244.0
67 TraesCS4B01G062600 chr5B 80.034 581 93 11 5417 5987 4545174 4544607 5.840000e-110 409.0
68 TraesCS4B01G062600 chr5B 88.288 222 12 7 3530 3748 100792434 100792224 2.900000e-63 254.0
69 TraesCS4B01G062600 chr1A 95.023 221 8 3 3742 3961 514878255 514878037 1.670000e-90 344.0
70 TraesCS4B01G062600 chr1B 91.080 213 7 6 3537 3749 293571016 293570816 1.720000e-70 278.0
71 TraesCS4B01G062600 chr1B 90.952 210 7 6 3537 3746 213592841 213593038 8.000000e-69 272.0
72 TraesCS4B01G062600 chr1B 89.815 216 9 3 3531 3745 131602797 131602594 1.340000e-66 265.0
73 TraesCS4B01G062600 chrUn 90.521 211 7 7 3537 3745 67918125 67918324 3.720000e-67 267.0
74 TraesCS4B01G062600 chrUn 84.211 209 9 6 3537 3745 47644209 47644025 1.390000e-41 182.0
75 TraesCS4B01G062600 chr7D 86.538 208 23 5 2770 2977 61277116 61276914 2.270000e-54 224.0
76 TraesCS4B01G062600 chr1D 100.000 28 0 0 5324 5351 9858627 9858654 1.100000e-02 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G062600 chr4B 54345238 54351496 6258 True 11559.000000 11559 100.000000 1 6259 1 chr4B.!!$R1 6258
1 TraesCS4B01G062600 chr4B 54137863 54140311 2448 True 1140.000000 1227 85.385000 2093 5320 2 chr4B.!!$R4 3227
2 TraesCS4B01G062600 chr4B 54036630 54041166 4536 True 716.000000 987 88.602000 1597 5233 3 chr4B.!!$R3 3636
3 TraesCS4B01G062600 chr4B 165027847 165028467 620 True 374.000000 374 78.219000 5382 5987 1 chr4B.!!$R2 605
4 TraesCS4B01G062600 chr4A 564971122 564975467 4345 False 1296.750000 3103 87.288750 847 6234 4 chr4A.!!$F3 5387
5 TraesCS4B01G062600 chr4A 565041070 565043655 2585 False 1123.500000 1131 83.017500 2091 5320 2 chr4A.!!$F4 3229
6 TraesCS4B01G062600 chr4A 565302344 565305572 3228 False 477.666667 880 81.254000 1701 5233 3 chr4A.!!$F5 3532
7 TraesCS4B01G062600 chr4D 37252707 37256827 4120 True 1425.500000 2403 91.854000 2891 5693 2 chr4D.!!$R4 2802
8 TraesCS4B01G062600 chr4D 37134903 37137384 2481 True 1166.000000 1242 84.226000 2220 5320 2 chr4D.!!$R3 3100
9 TraesCS4B01G062600 chr4D 37231852 37232395 543 True 627.000000 627 87.636000 5695 6237 1 chr4D.!!$R1 542
10 TraesCS4B01G062600 chr4D 37049337 37052465 3128 True 440.666667 776 86.426333 1597 5233 3 chr4D.!!$R2 3636
11 TraesCS4B01G062600 chr4D 37261763 37263599 1836 True 353.420000 941 89.195000 688 2896 5 chr4D.!!$R5 2208
12 TraesCS4B01G062600 chr7A 571327595 571328483 888 True 998.000000 998 87.168000 5351 6237 1 chr7A.!!$R2 886
13 TraesCS4B01G062600 chr7A 158194760 158195329 569 True 398.000000 398 79.585000 5351 5919 1 chr7A.!!$R1 568
14 TraesCS4B01G062600 chr3A 655536971 655537600 629 True 691.000000 691 86.688000 5351 5973 1 chr3A.!!$R1 622
15 TraesCS4B01G062600 chr3D 553330982 553331558 576 False 575.000000 575 85.345000 1 556 1 chr3D.!!$F1 555
16 TraesCS4B01G062600 chr6B 693040984 693041625 641 False 569.000000 569 82.972000 5355 5989 1 chr6B.!!$F2 634
17 TraesCS4B01G062600 chr6B 319532277 319532863 586 False 407.000000 407 79.899000 5412 5985 1 chr6B.!!$F1 573
18 TraesCS4B01G062600 chr5D 210775154 210775729 575 True 551.000000 551 84.629000 1 555 1 chr5D.!!$R1 554
19 TraesCS4B01G062600 chr6A 183262800 183263408 608 True 341.500000 542 90.709500 1 640 2 chr6A.!!$R1 639
20 TraesCS4B01G062600 chr6D 460806466 460807021 555 False 540.000000 540 84.369000 1 556 1 chr6D.!!$F1 555
21 TraesCS4B01G062600 chr2B 800511321 800511844 523 False 278.500000 279 91.449000 3537 3746 2 chr2B.!!$F9 209
22 TraesCS4B01G062600 chr5B 4544607 4545174 567 True 409.000000 409 80.034000 5417 5987 1 chr5B.!!$R1 570

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
673 697 0.037017 TTCCAAAAGGATTCCCGCGA 59.963 50.0 8.23 0.0 37.58 5.87 F
1152 1194 0.108804 CAGCGAACCTCGGAAGCTTA 60.109 55.0 0.00 0.0 40.84 3.09 F
1153 1195 0.173708 AGCGAACCTCGGAAGCTTAG 59.826 55.0 0.00 0.0 40.84 2.18 F
2916 5050 0.179023 ATCCGTCTACTCTCGGGTCC 60.179 60.0 3.85 0.0 45.79 4.46 F
3869 6676 0.175760 CCGGGGATGTAGCCATATCG 59.824 60.0 0.00 0.0 0.00 2.92 F
3917 6724 0.110056 GTGCCTCGTGTGATTGCTTG 60.110 55.0 0.00 0.0 0.00 4.01 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1669 2199 0.679640 CGGGACCCATTAAGCTTGCA 60.680 55.000 12.15 0.00 0.00 4.08 R
2911 5045 1.000060 GGCCTGTTTAAAAACGGACCC 60.000 52.381 14.56 10.71 45.87 4.46 R
3048 5184 3.366396 TGCGAAGATAGGATATCCTCCC 58.634 50.000 27.86 19.20 44.77 4.30 R
3898 6705 0.110056 CAAGCAATCACACGAGGCAC 60.110 55.000 0.00 0.00 0.00 5.01 R
4692 9307 0.248621 GCATATGAGTTGTTGGCCGC 60.249 55.000 6.97 0.00 0.00 6.53 R
5809 10467 1.227639 AGTAGTCTATCGCGCGTCAT 58.772 50.000 30.98 19.41 0.00 3.06 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
63 64 4.265320 GCTGCTACCGTATTTGATTTTTGC 59.735 41.667 0.00 0.00 0.00 3.68
70 71 5.475564 ACCGTATTTGATTTTTGCTACCACT 59.524 36.000 0.00 0.00 0.00 4.00
82 83 6.767524 TTTGCTACCACTCTTTCTTTTTGA 57.232 33.333 0.00 0.00 0.00 2.69
184 207 1.671379 GCCGCTTTTCTTCCCTCGT 60.671 57.895 0.00 0.00 0.00 4.18
222 245 3.242518 GAGCTACGAAATTGGCAAAACC 58.757 45.455 3.01 0.00 39.84 3.27
223 246 2.890945 AGCTACGAAATTGGCAAAACCT 59.109 40.909 3.01 0.00 40.22 3.50
225 248 2.524569 ACGAAATTGGCAAAACCTGG 57.475 45.000 3.01 0.00 40.22 4.45
227 250 2.432510 ACGAAATTGGCAAAACCTGGAA 59.567 40.909 3.01 0.00 40.22 3.53
229 252 2.928801 AATTGGCAAAACCTGGAACC 57.071 45.000 3.01 0.00 40.22 3.62
231 254 1.395826 TTGGCAAAACCTGGAACCGG 61.396 55.000 0.00 0.00 40.22 5.28
232 255 1.830847 GGCAAAACCTGGAACCGGT 60.831 57.895 0.00 0.00 35.97 5.28
233 256 1.362355 GCAAAACCTGGAACCGGTG 59.638 57.895 8.52 0.00 34.33 4.94
244 267 1.202475 GGAACCGGTGCACAATTTTGT 60.202 47.619 20.43 2.83 43.36 2.83
276 299 1.069978 CCAAATTTTGCTGGAACCGGT 59.930 47.619 0.00 0.00 34.35 5.28
373 396 1.529226 CGTGTTTTGCTACATGGGGA 58.471 50.000 0.00 0.00 32.58 4.81
523 547 2.032620 ACCACGAGCTAGTAGGGAATG 58.967 52.381 9.85 0.00 0.00 2.67
554 578 2.753077 CGTTTCTCGCGAGAAGAAAG 57.247 50.000 40.19 28.77 46.80 2.62
555 579 1.387084 CGTTTCTCGCGAGAAGAAAGG 59.613 52.381 40.19 29.98 46.80 3.11
556 580 1.727335 GTTTCTCGCGAGAAGAAAGGG 59.273 52.381 40.19 14.91 46.80 3.95
557 581 0.389948 TTCTCGCGAGAAGAAAGGGC 60.390 55.000 39.93 0.00 42.06 5.19
558 582 1.216710 CTCGCGAGAAGAAAGGGCT 59.783 57.895 32.06 0.00 41.32 5.19
559 583 1.079819 TCGCGAGAAGAAAGGGCTG 60.080 57.895 3.71 0.00 37.03 4.85
560 584 2.103042 CGCGAGAAGAAAGGGCTGG 61.103 63.158 0.00 0.00 0.00 4.85
561 585 2.402572 GCGAGAAGAAAGGGCTGGC 61.403 63.158 0.00 0.00 0.00 4.85
562 586 2.103042 CGAGAAGAAAGGGCTGGCG 61.103 63.158 0.00 0.00 0.00 5.69
563 587 1.003233 GAGAAGAAAGGGCTGGCGT 60.003 57.895 0.00 0.00 0.00 5.68
564 588 0.606673 GAGAAGAAAGGGCTGGCGTT 60.607 55.000 3.12 3.12 0.00 4.84
565 589 0.178990 AGAAGAAAGGGCTGGCGTTT 60.179 50.000 19.69 19.69 0.00 3.60
566 590 0.241213 GAAGAAAGGGCTGGCGTTTC 59.759 55.000 30.21 30.21 0.00 2.78
567 591 0.178990 AAGAAAGGGCTGGCGTTTCT 60.179 50.000 32.76 32.76 41.29 2.52
568 592 0.606673 AGAAAGGGCTGGCGTTTCTC 60.607 55.000 32.76 18.63 36.03 2.87
569 593 1.912371 GAAAGGGCTGGCGTTTCTCG 61.912 60.000 30.11 0.00 43.12 4.04
644 668 4.477975 GGCTGCGCGTCGACTAGT 62.478 66.667 14.70 0.00 0.00 2.57
645 669 2.402388 GCTGCGCGTCGACTAGTA 59.598 61.111 14.70 5.90 0.00 1.82
646 670 1.933519 GCTGCGCGTCGACTAGTAC 60.934 63.158 14.70 0.00 0.00 2.73
647 671 1.714414 CTGCGCGTCGACTAGTACT 59.286 57.895 14.70 0.00 0.00 2.73
648 672 0.586748 CTGCGCGTCGACTAGTACTG 60.587 60.000 14.70 0.00 0.00 2.74
649 673 1.933519 GCGCGTCGACTAGTACTGC 60.934 63.158 14.70 6.63 0.00 4.40
650 674 1.297451 CGCGTCGACTAGTACTGCC 60.297 63.158 14.70 0.00 0.00 4.85
651 675 1.063811 GCGTCGACTAGTACTGCCC 59.936 63.158 14.70 0.00 0.00 5.36
652 676 1.651240 GCGTCGACTAGTACTGCCCA 61.651 60.000 14.70 0.00 0.00 5.36
653 677 1.022735 CGTCGACTAGTACTGCCCAT 58.977 55.000 14.70 0.00 0.00 4.00
654 678 1.404391 CGTCGACTAGTACTGCCCATT 59.596 52.381 14.70 0.00 0.00 3.16
655 679 2.159282 CGTCGACTAGTACTGCCCATTT 60.159 50.000 14.70 0.00 0.00 2.32
656 680 3.445857 GTCGACTAGTACTGCCCATTTC 58.554 50.000 8.70 0.00 0.00 2.17
657 681 2.429610 TCGACTAGTACTGCCCATTTCC 59.570 50.000 5.39 0.00 0.00 3.13
658 682 2.167693 CGACTAGTACTGCCCATTTCCA 59.832 50.000 5.39 0.00 0.00 3.53
659 683 3.369052 CGACTAGTACTGCCCATTTCCAA 60.369 47.826 5.39 0.00 0.00 3.53
660 684 4.585879 GACTAGTACTGCCCATTTCCAAA 58.414 43.478 5.39 0.00 0.00 3.28
661 685 4.993028 ACTAGTACTGCCCATTTCCAAAA 58.007 39.130 5.39 0.00 0.00 2.44
662 686 5.010282 ACTAGTACTGCCCATTTCCAAAAG 58.990 41.667 5.39 0.00 0.00 2.27
663 687 3.165071 AGTACTGCCCATTTCCAAAAGG 58.835 45.455 0.00 0.00 0.00 3.11
664 688 2.397044 ACTGCCCATTTCCAAAAGGA 57.603 45.000 0.00 0.00 0.00 3.36
665 689 2.906568 ACTGCCCATTTCCAAAAGGAT 58.093 42.857 0.00 0.00 0.00 3.24
666 690 3.250617 ACTGCCCATTTCCAAAAGGATT 58.749 40.909 0.00 0.00 0.00 3.01
667 691 3.261643 ACTGCCCATTTCCAAAAGGATTC 59.738 43.478 0.00 0.00 0.00 2.52
668 692 2.571202 TGCCCATTTCCAAAAGGATTCC 59.429 45.455 0.00 0.00 0.00 3.01
669 693 2.092968 GCCCATTTCCAAAAGGATTCCC 60.093 50.000 0.00 0.00 0.00 3.97
670 694 2.168313 CCCATTTCCAAAAGGATTCCCG 59.832 50.000 0.00 0.00 37.58 5.14
671 695 2.418609 CCATTTCCAAAAGGATTCCCGC 60.419 50.000 0.00 0.00 37.58 6.13
672 696 0.885196 TTTCCAAAAGGATTCCCGCG 59.115 50.000 0.00 0.00 37.58 6.46
673 697 0.037017 TTCCAAAAGGATTCCCGCGA 59.963 50.000 8.23 0.00 37.58 5.87
674 698 0.392461 TCCAAAAGGATTCCCGCGAG 60.392 55.000 8.23 0.00 37.58 5.03
675 699 0.392461 CCAAAAGGATTCCCGCGAGA 60.392 55.000 8.23 0.00 37.58 4.04
676 700 1.448985 CAAAAGGATTCCCGCGAGAA 58.551 50.000 8.23 6.60 37.58 2.87
677 701 1.398390 CAAAAGGATTCCCGCGAGAAG 59.602 52.381 8.23 0.00 37.58 2.85
678 702 0.902531 AAAGGATTCCCGCGAGAAGA 59.097 50.000 8.23 0.00 37.58 2.87
679 703 0.902531 AAGGATTCCCGCGAGAAGAA 59.097 50.000 8.23 5.42 37.58 2.52
680 704 0.461961 AGGATTCCCGCGAGAAGAAG 59.538 55.000 8.23 0.00 37.58 2.85
681 705 0.530870 GGATTCCCGCGAGAAGAAGG 60.531 60.000 8.23 0.00 0.00 3.46
682 706 1.153349 ATTCCCGCGAGAAGAAGGC 60.153 57.895 8.23 0.00 0.00 4.35
683 707 2.595009 ATTCCCGCGAGAAGAAGGCC 62.595 60.000 8.23 0.00 0.00 5.19
714 738 2.960819 GGCGAATCAAGCCGATAGTAT 58.039 47.619 0.00 0.00 45.58 2.12
715 739 4.106029 GGCGAATCAAGCCGATAGTATA 57.894 45.455 0.00 0.00 45.58 1.47
716 740 3.858238 GGCGAATCAAGCCGATAGTATAC 59.142 47.826 0.00 0.00 45.58 1.47
717 741 4.482386 GCGAATCAAGCCGATAGTATACA 58.518 43.478 5.50 0.00 32.51 2.29
718 742 4.921515 GCGAATCAAGCCGATAGTATACAA 59.078 41.667 5.50 0.00 32.51 2.41
719 743 5.061064 GCGAATCAAGCCGATAGTATACAAG 59.939 44.000 5.50 0.00 32.51 3.16
720 744 6.150318 CGAATCAAGCCGATAGTATACAAGT 58.850 40.000 5.50 0.00 32.51 3.16
721 745 7.303261 CGAATCAAGCCGATAGTATACAAGTA 58.697 38.462 5.50 0.00 32.51 2.24
722 746 7.270793 CGAATCAAGCCGATAGTATACAAGTAC 59.729 40.741 5.50 0.00 32.51 2.73
723 747 5.993891 TCAAGCCGATAGTATACAAGTACG 58.006 41.667 5.50 3.74 0.00 3.67
755 779 3.730761 GTTGCTGGCTCTGGCGTG 61.731 66.667 0.00 0.00 39.81 5.34
804 828 2.967270 CTGAAGGCAGAAAAGGGGG 58.033 57.895 0.00 0.00 45.17 5.40
805 829 1.228862 TGAAGGCAGAAAAGGGGGC 60.229 57.895 0.00 0.00 0.00 5.80
806 830 1.984570 GAAGGCAGAAAAGGGGGCC 60.985 63.158 0.00 0.00 46.77 5.80
811 835 1.675641 CAGAAAAGGGGGCCGACAG 60.676 63.158 0.00 0.00 0.00 3.51
870 894 3.674753 CGGAAACCATTTTTGCAGCTTAG 59.325 43.478 0.00 0.00 0.00 2.18
884 915 1.524482 CTTAGCTCCAGTCCCCTGC 59.476 63.158 0.00 0.00 37.38 4.85
885 916 2.303549 CTTAGCTCCAGTCCCCTGCG 62.304 65.000 0.00 0.00 37.38 5.18
886 917 2.798445 TTAGCTCCAGTCCCCTGCGA 62.798 60.000 0.00 0.00 37.38 5.10
887 918 4.459089 GCTCCAGTCCCCTGCGAC 62.459 72.222 0.00 0.00 37.38 5.19
888 919 2.997315 CTCCAGTCCCCTGCGACA 60.997 66.667 0.00 0.00 37.38 4.35
889 920 2.997315 TCCAGTCCCCTGCGACAG 60.997 66.667 0.00 0.00 37.38 3.51
890 921 4.767255 CCAGTCCCCTGCGACAGC 62.767 72.222 0.00 0.00 45.41 4.40
943 974 0.912006 GGGGAGGAGGAGAAGCAAGT 60.912 60.000 0.00 0.00 0.00 3.16
951 982 2.359230 AGAAGCAAGTCCGCCAGC 60.359 61.111 0.00 0.00 0.00 4.85
1005 1047 2.797278 CCGGTCGAAGGAGATGGGG 61.797 68.421 2.20 0.00 0.00 4.96
1006 1048 1.756950 CGGTCGAAGGAGATGGGGA 60.757 63.158 0.00 0.00 0.00 4.81
1008 1050 1.403687 GGTCGAAGGAGATGGGGAGG 61.404 65.000 0.00 0.00 0.00 4.30
1078 1120 0.317479 CCAGGTTCGGTTCTTCTCGT 59.683 55.000 0.00 0.00 0.00 4.18
1086 1128 4.617808 TCGGTTCTTCTCGTCTTATCTG 57.382 45.455 0.00 0.00 0.00 2.90
1128 1170 5.244785 TGCAGATTTGGTAGTAGTAGTCG 57.755 43.478 0.00 0.00 0.00 4.18
1131 1173 5.512473 CAGATTTGGTAGTAGTAGTCGAGC 58.488 45.833 0.00 0.00 0.00 5.03
1134 1176 1.293924 GGTAGTAGTAGTCGAGCGCA 58.706 55.000 11.47 0.00 0.00 6.09
1151 1193 1.374758 CAGCGAACCTCGGAAGCTT 60.375 57.895 0.00 0.00 40.84 3.74
1152 1194 0.108804 CAGCGAACCTCGGAAGCTTA 60.109 55.000 0.00 0.00 40.84 3.09
1153 1195 0.173708 AGCGAACCTCGGAAGCTTAG 59.826 55.000 0.00 0.00 40.84 2.18
1156 1198 1.736032 CGAACCTCGGAAGCTTAGTGG 60.736 57.143 16.42 16.42 36.00 4.00
1157 1199 0.613777 AACCTCGGAAGCTTAGTGGG 59.386 55.000 19.99 13.81 0.00 4.61
1158 1200 0.544595 ACCTCGGAAGCTTAGTGGGT 60.545 55.000 19.99 14.31 0.00 4.51
1160 1202 0.895530 CTCGGAAGCTTAGTGGGTGA 59.104 55.000 0.00 0.00 0.00 4.02
1161 1203 0.606604 TCGGAAGCTTAGTGGGTGAC 59.393 55.000 0.00 0.00 0.00 3.67
1164 1206 1.672145 GGAAGCTTAGTGGGTGACGAC 60.672 57.143 0.00 0.00 39.69 4.34
1165 1207 0.320697 AAGCTTAGTGGGTGACGACC 59.679 55.000 0.00 0.00 40.37 4.79
1166 1208 0.542232 AGCTTAGTGGGTGACGACCT 60.542 55.000 0.00 0.00 42.66 3.85
1178 1220 3.744719 CGACCTGTCCTCCGCGAA 61.745 66.667 8.23 0.00 0.00 4.70
1179 1221 2.182030 GACCTGTCCTCCGCGAAG 59.818 66.667 8.23 0.00 0.00 3.79
1192 1234 2.316687 CGAAGCGCGAACGAATCC 59.683 61.111 12.10 0.00 44.57 3.01
1193 1235 2.441378 CGAAGCGCGAACGAATCCA 61.441 57.895 12.10 0.00 44.57 3.41
1194 1236 1.058903 GAAGCGCGAACGAATCCAC 59.941 57.895 12.10 0.00 43.93 4.02
1195 1237 2.292802 GAAGCGCGAACGAATCCACC 62.293 60.000 12.10 0.00 43.93 4.61
1196 1238 3.115892 GCGCGAACGAATCCACCA 61.116 61.111 12.10 0.00 43.93 4.17
1197 1239 2.776072 CGCGAACGAATCCACCAC 59.224 61.111 0.00 0.00 43.93 4.16
1198 1240 2.736682 CGCGAACGAATCCACCACC 61.737 63.158 0.00 0.00 43.93 4.61
1199 1241 2.396157 GCGAACGAATCCACCACCC 61.396 63.158 0.00 0.00 0.00 4.61
1200 1242 1.743995 CGAACGAATCCACCACCCC 60.744 63.158 0.00 0.00 0.00 4.95
1201 1243 1.743995 GAACGAATCCACCACCCCG 60.744 63.158 0.00 0.00 0.00 5.73
1202 1244 3.262448 AACGAATCCACCACCCCGG 62.262 63.158 0.00 0.00 42.50 5.73
1203 1245 3.395702 CGAATCCACCACCCCGGA 61.396 66.667 0.73 0.00 38.63 5.14
1204 1246 2.271173 GAATCCACCACCCCGGAC 59.729 66.667 0.73 0.00 38.63 4.79
1205 1247 3.335729 AATCCACCACCCCGGACC 61.336 66.667 0.73 0.00 38.63 4.46
1206 1248 3.883822 AATCCACCACCCCGGACCT 62.884 63.158 0.73 0.00 38.63 3.85
1209 1251 3.009115 CACCACCCCGGACCTGAT 61.009 66.667 0.73 0.00 38.63 2.90
1251 1293 1.709147 GCCGTGTTGCAGCTAGATGG 61.709 60.000 10.52 7.76 0.00 3.51
1269 1311 2.194212 GCGAGCCCGTCCTCTGATA 61.194 63.158 0.00 0.00 38.24 2.15
1270 1312 1.953017 CGAGCCCGTCCTCTGATAG 59.047 63.158 0.00 0.00 0.00 2.08
1271 1313 0.535328 CGAGCCCGTCCTCTGATAGA 60.535 60.000 0.00 0.00 0.00 1.98
1272 1314 0.955905 GAGCCCGTCCTCTGATAGAC 59.044 60.000 0.00 0.00 0.00 2.59
1273 1315 0.553819 AGCCCGTCCTCTGATAGACT 59.446 55.000 6.46 0.00 0.00 3.24
1275 1317 1.751032 GCCCGTCCTCTGATAGACTGA 60.751 57.143 6.46 0.00 0.00 3.41
1285 1337 8.470805 GTCCTCTGATAGACTGATACTGAAAAA 58.529 37.037 1.83 0.00 0.00 1.94
1302 1354 4.512198 TGAAAAACGAATAGCTTGGAACGA 59.488 37.500 0.00 0.00 0.00 3.85
1304 1356 5.622770 AAAACGAATAGCTTGGAACGAAT 57.377 34.783 0.00 0.00 0.00 3.34
1351 1465 5.902613 TTCTCTGCTTGGGATAAAATGTG 57.097 39.130 0.00 0.00 0.00 3.21
1381 1495 6.459923 CCCTACTAGCATTAAGGAATCAGTC 58.540 44.000 0.00 0.00 0.00 3.51
1518 1639 5.993748 TTTTATCCCCCTCAAATTGACAC 57.006 39.130 0.00 0.00 0.00 3.67
1540 2070 9.080097 GACACCATATTTATGTCTACTCCTACT 57.920 37.037 0.00 0.00 39.72 2.57
1559 2089 9.522804 CTCCTACTCATCTTCTATTGTTTGTAC 57.477 37.037 0.00 0.00 0.00 2.90
1669 2199 4.765339 CCGTTTAGGGAAACTTTGAGGATT 59.235 41.667 0.00 0.00 42.44 3.01
2297 4391 1.302511 GTGGACGGCTGGACACAAT 60.303 57.895 14.68 0.00 34.16 2.71
2391 4492 2.064762 CTTCTCTGTTTGCTGACCTCG 58.935 52.381 0.00 0.00 0.00 4.63
2493 4594 6.156748 GGTGTTCCAACCAAAACTTATTCT 57.843 37.500 0.00 0.00 40.22 2.40
2495 4596 7.143340 GGTGTTCCAACCAAAACTTATTCTAC 58.857 38.462 0.00 0.00 40.22 2.59
2621 4746 6.043243 ACTCCATGATCATAAACCGGTTCTAT 59.957 38.462 22.53 16.61 0.00 1.98
2653 4778 6.403866 AATTGCACTGACCAACTTCATTTA 57.596 33.333 0.00 0.00 0.00 1.40
2654 4779 5.843673 TTGCACTGACCAACTTCATTTAA 57.156 34.783 0.00 0.00 0.00 1.52
2732 4861 9.547753 AAGTAAGTCTATGCACATTACCTTATG 57.452 33.333 0.00 0.00 0.00 1.90
2758 4887 2.281070 ACCACGAGTGCTTGCTGG 60.281 61.111 0.00 0.00 0.00 4.85
2760 4889 1.597854 CCACGAGTGCTTGCTGGAA 60.598 57.895 0.00 0.00 0.00 3.53
2819 4953 2.666190 CAGGGTCACTGTGGTGCG 60.666 66.667 8.11 0.00 42.42 5.34
2916 5050 0.179023 ATCCGTCTACTCTCGGGTCC 60.179 60.000 3.85 0.00 45.79 4.46
3048 5184 0.884259 TGTGTGGCGATGGTTGTGAG 60.884 55.000 0.00 0.00 0.00 3.51
3126 5265 7.006865 TGACGAGGTATAGCTAACTCTCTAT 57.993 40.000 4.01 7.46 39.21 1.98
3151 5297 4.930696 TCTACCACTTCAGTGTCCTGATA 58.069 43.478 6.22 0.00 46.80 2.15
3186 5369 9.995003 ATCCTGTTATTATGAATCACTTCTCTC 57.005 33.333 0.00 0.00 32.29 3.20
3230 5413 7.038587 ACAACAGTGGGTATTACTGAATCTGTA 60.039 37.037 11.65 0.00 46.52 2.74
3367 5686 5.375417 TCATTTGGCGCTAAATGATATGG 57.625 39.130 40.87 24.61 46.50 2.74
3420 5906 7.733047 TCAGGGAATAGTAGGAGCATATTGTAA 59.267 37.037 0.00 0.00 0.00 2.41
3481 5967 2.285083 TGTTCAGGCACAACACTACAC 58.715 47.619 0.00 0.00 0.00 2.90
3489 5975 5.008613 CAGGCACAACACTACACTACAAATT 59.991 40.000 0.00 0.00 0.00 1.82
3521 6014 5.040635 TCAAGTTTTGGAAAATTCGCTGTC 58.959 37.500 0.00 0.00 0.00 3.51
3524 6017 0.947960 TTGGAAAATTCGCTGTCGCA 59.052 45.000 0.00 0.00 35.30 5.10
3527 6020 2.942376 TGGAAAATTCGCTGTCGCATAT 59.058 40.909 0.00 0.00 35.30 1.78
3528 6021 4.123506 TGGAAAATTCGCTGTCGCATATA 58.876 39.130 0.00 0.00 35.30 0.86
3529 6022 4.025229 TGGAAAATTCGCTGTCGCATATAC 60.025 41.667 0.00 0.00 35.30 1.47
3530 6023 4.025229 GGAAAATTCGCTGTCGCATATACA 60.025 41.667 0.00 0.00 35.30 2.29
3531 6024 5.478233 AAAATTCGCTGTCGCATATACAA 57.522 34.783 0.00 0.00 35.30 2.41
3532 6025 4.452890 AATTCGCTGTCGCATATACAAC 57.547 40.909 0.00 0.00 35.30 3.32
3533 6026 2.570442 TCGCTGTCGCATATACAACA 57.430 45.000 0.00 0.00 35.30 3.33
3534 6027 3.092334 TCGCTGTCGCATATACAACAT 57.908 42.857 0.00 0.00 35.30 2.71
3535 6028 2.794350 TCGCTGTCGCATATACAACATG 59.206 45.455 0.00 0.00 35.30 3.21
3592 6085 7.117379 GGTAGACATAACACGATTTATAAGGGC 59.883 40.741 0.00 0.00 0.00 5.19
3641 6447 0.991920 CAGGCTAGTCTTTTGGGGGA 59.008 55.000 0.00 0.00 0.00 4.81
3680 6486 2.826128 TCATAAGTCGGTGTTGCTCTCT 59.174 45.455 0.00 0.00 0.00 3.10
3732 6539 4.143333 CTGGTGTAGCGGACCCGG 62.143 72.222 10.70 0.00 40.19 5.73
3746 6553 0.831966 ACCCGGGATTGCGTAACATA 59.168 50.000 32.02 0.00 0.00 2.29
3747 6554 1.209990 ACCCGGGATTGCGTAACATAA 59.790 47.619 32.02 0.00 0.00 1.90
3748 6555 2.158726 ACCCGGGATTGCGTAACATAAT 60.159 45.455 32.02 0.00 0.00 1.28
3749 6556 3.071312 ACCCGGGATTGCGTAACATAATA 59.929 43.478 32.02 0.00 0.00 0.98
3750 6557 3.682858 CCCGGGATTGCGTAACATAATAG 59.317 47.826 18.48 0.00 0.00 1.73
3751 6558 3.124636 CCGGGATTGCGTAACATAATAGC 59.875 47.826 0.00 0.00 0.00 2.97
3752 6559 3.743911 CGGGATTGCGTAACATAATAGCA 59.256 43.478 0.00 0.00 35.90 3.49
3753 6560 4.377022 CGGGATTGCGTAACATAATAGCAC 60.377 45.833 0.00 0.00 37.57 4.40
3754 6561 4.377022 GGGATTGCGTAACATAATAGCACG 60.377 45.833 0.00 0.00 37.57 5.34
3755 6562 4.377022 GGATTGCGTAACATAATAGCACGG 60.377 45.833 0.00 0.00 37.57 4.94
3756 6563 2.475818 TGCGTAACATAATAGCACGGG 58.524 47.619 0.00 0.00 33.39 5.28
3757 6564 1.193874 GCGTAACATAATAGCACGGGC 59.806 52.381 0.00 0.00 41.61 6.13
3758 6565 2.475818 CGTAACATAATAGCACGGGCA 58.524 47.619 14.57 0.00 44.61 5.36
3759 6566 2.220133 CGTAACATAATAGCACGGGCAC 59.780 50.000 14.57 0.00 44.61 5.01
3760 6567 1.295792 AACATAATAGCACGGGCACG 58.704 50.000 14.57 6.92 44.61 5.34
3761 6568 1.157870 ACATAATAGCACGGGCACGC 61.158 55.000 14.57 0.00 46.04 5.34
3762 6569 1.954146 ATAATAGCACGGGCACGCG 60.954 57.895 14.57 3.53 46.04 6.01
3811 6618 4.524318 CGGCCGGAGTGCGGTATT 62.524 66.667 24.77 0.00 0.00 1.89
3812 6619 2.895372 GGCCGGAGTGCGGTATTG 60.895 66.667 24.77 0.00 0.00 1.90
3813 6620 2.125269 GCCGGAGTGCGGTATTGT 60.125 61.111 24.77 0.00 0.00 2.71
3814 6621 2.461110 GCCGGAGTGCGGTATTGTG 61.461 63.158 24.77 0.00 0.00 3.33
3815 6622 1.216977 CCGGAGTGCGGTATTGTGA 59.783 57.895 15.93 0.00 0.00 3.58
3816 6623 1.082117 CCGGAGTGCGGTATTGTGAC 61.082 60.000 15.93 0.00 0.00 3.67
3817 6624 1.410737 CGGAGTGCGGTATTGTGACG 61.411 60.000 0.00 0.00 0.00 4.35
3818 6625 1.082117 GGAGTGCGGTATTGTGACGG 61.082 60.000 0.00 0.00 0.00 4.79
3819 6626 0.389426 GAGTGCGGTATTGTGACGGT 60.389 55.000 0.00 0.00 0.00 4.83
3820 6627 0.669318 AGTGCGGTATTGTGACGGTG 60.669 55.000 0.00 0.00 0.00 4.94
3821 6628 0.947180 GTGCGGTATTGTGACGGTGT 60.947 55.000 0.00 0.00 0.00 4.16
3822 6629 0.668096 TGCGGTATTGTGACGGTGTC 60.668 55.000 0.00 0.00 0.00 3.67
3823 6630 0.668096 GCGGTATTGTGACGGTGTCA 60.668 55.000 0.00 0.00 40.50 3.58
3830 6637 3.299977 TGACGGTGTCACGGGGAG 61.300 66.667 14.33 0.00 37.67 4.30
3831 6638 4.065281 GACGGTGTCACGGGGAGG 62.065 72.222 14.33 0.00 38.39 4.30
3832 6639 4.608774 ACGGTGTCACGGGGAGGA 62.609 66.667 14.33 0.00 38.39 3.71
3833 6640 3.760035 CGGTGTCACGGGGAGGAG 61.760 72.222 2.66 0.00 0.00 3.69
3834 6641 4.083862 GGTGTCACGGGGAGGAGC 62.084 72.222 0.00 0.00 0.00 4.70
3835 6642 4.436998 GTGTCACGGGGAGGAGCG 62.437 72.222 0.00 0.00 0.00 5.03
3844 6651 3.902086 GGAGGAGCGCCCGTAGTC 61.902 72.222 2.29 0.00 40.87 2.59
3845 6652 3.138798 GAGGAGCGCCCGTAGTCA 61.139 66.667 2.29 0.00 40.87 3.41
3846 6653 3.127352 GAGGAGCGCCCGTAGTCAG 62.127 68.421 2.29 0.00 40.87 3.51
3847 6654 4.208686 GGAGCGCCCGTAGTCAGG 62.209 72.222 2.29 0.00 0.00 3.86
3848 6655 4.874977 GAGCGCCCGTAGTCAGGC 62.875 72.222 2.29 0.00 46.17 4.85
3856 6663 4.791069 GTAGTCAGGCCCCGGGGA 62.791 72.222 44.86 20.80 37.50 4.81
3857 6664 3.774336 TAGTCAGGCCCCGGGGAT 61.774 66.667 44.86 28.05 37.50 3.85
3860 6667 4.096816 TCAGGCCCCGGGGATGTA 62.097 66.667 44.86 24.26 37.50 2.29
3861 6668 3.560251 CAGGCCCCGGGGATGTAG 61.560 72.222 44.86 22.59 37.50 2.74
3865 6672 2.854032 CCCCGGGGATGTAGCCAT 60.854 66.667 38.41 0.00 37.50 4.40
3866 6673 1.537889 CCCCGGGGATGTAGCCATA 60.538 63.158 38.41 0.00 37.50 2.74
3867 6674 0.914417 CCCCGGGGATGTAGCCATAT 60.914 60.000 38.41 0.00 37.50 1.78
3868 6675 0.541863 CCCGGGGATGTAGCCATATC 59.458 60.000 14.71 0.00 0.00 1.63
3869 6676 0.175760 CCGGGGATGTAGCCATATCG 59.824 60.000 0.00 0.00 0.00 2.92
3870 6677 0.175760 CGGGGATGTAGCCATATCGG 59.824 60.000 0.00 0.00 38.11 4.18
3871 6678 1.276622 GGGGATGTAGCCATATCGGT 58.723 55.000 0.00 0.00 36.97 4.69
3872 6679 1.066143 GGGGATGTAGCCATATCGGTG 60.066 57.143 0.00 0.00 36.97 4.94
3873 6680 1.899814 GGGATGTAGCCATATCGGTGA 59.100 52.381 0.00 0.00 36.97 4.02
3874 6681 2.301870 GGGATGTAGCCATATCGGTGAA 59.698 50.000 0.00 0.00 36.97 3.18
3875 6682 3.326747 GGATGTAGCCATATCGGTGAAC 58.673 50.000 0.00 0.00 36.97 3.18
3876 6683 2.902705 TGTAGCCATATCGGTGAACC 57.097 50.000 0.00 0.00 36.97 3.62
3877 6684 2.394632 TGTAGCCATATCGGTGAACCT 58.605 47.619 0.00 0.00 36.97 3.50
3878 6685 2.769663 TGTAGCCATATCGGTGAACCTT 59.230 45.455 0.00 0.00 36.97 3.50
3879 6686 2.332063 AGCCATATCGGTGAACCTTG 57.668 50.000 0.00 0.00 36.97 3.61
3880 6687 1.559682 AGCCATATCGGTGAACCTTGT 59.440 47.619 0.00 0.00 36.97 3.16
3881 6688 2.026262 AGCCATATCGGTGAACCTTGTT 60.026 45.455 0.00 0.00 36.97 2.83
3882 6689 3.199071 AGCCATATCGGTGAACCTTGTTA 59.801 43.478 0.00 0.00 36.97 2.41
3883 6690 3.942748 GCCATATCGGTGAACCTTGTTAA 59.057 43.478 0.00 0.00 36.97 2.01
3884 6691 4.201881 GCCATATCGGTGAACCTTGTTAAC 60.202 45.833 0.00 0.00 36.97 2.01
3885 6692 4.938832 CCATATCGGTGAACCTTGTTAACA 59.061 41.667 3.59 3.59 0.00 2.41
3886 6693 5.413213 CCATATCGGTGAACCTTGTTAACAA 59.587 40.000 19.53 19.53 0.00 2.83
3887 6694 6.072397 CCATATCGGTGAACCTTGTTAACAAA 60.072 38.462 20.89 4.13 35.15 2.83
3888 6695 7.362574 CCATATCGGTGAACCTTGTTAACAAAT 60.363 37.037 20.89 10.22 35.15 2.32
3889 6696 5.427036 TCGGTGAACCTTGTTAACAAATC 57.573 39.130 20.89 18.03 35.15 2.17
3890 6697 5.127491 TCGGTGAACCTTGTTAACAAATCT 58.873 37.500 20.89 8.64 35.15 2.40
3891 6698 5.237779 TCGGTGAACCTTGTTAACAAATCTC 59.762 40.000 20.89 17.45 35.15 2.75
3892 6699 5.449304 GGTGAACCTTGTTAACAAATCTCG 58.551 41.667 20.89 9.57 35.15 4.04
3893 6700 5.449304 GTGAACCTTGTTAACAAATCTCGG 58.551 41.667 20.89 19.03 35.15 4.63
3894 6701 5.008316 GTGAACCTTGTTAACAAATCTCGGT 59.992 40.000 20.89 19.61 35.15 4.69
3895 6702 5.008217 TGAACCTTGTTAACAAATCTCGGTG 59.992 40.000 22.73 10.27 35.15 4.94
3896 6703 4.457466 ACCTTGTTAACAAATCTCGGTGT 58.543 39.130 21.85 8.82 35.15 4.16
3897 6704 4.885325 ACCTTGTTAACAAATCTCGGTGTT 59.115 37.500 21.85 4.56 40.88 3.32
3898 6705 5.212194 CCTTGTTAACAAATCTCGGTGTTG 58.788 41.667 20.89 5.80 38.40 3.33
3899 6706 5.220970 CCTTGTTAACAAATCTCGGTGTTGT 60.221 40.000 20.89 0.00 38.40 3.32
3900 6707 5.163302 TGTTAACAAATCTCGGTGTTGTG 57.837 39.130 5.64 0.00 38.40 3.33
3901 6708 2.774439 AACAAATCTCGGTGTTGTGC 57.226 45.000 0.00 0.00 36.62 4.57
3902 6709 0.951558 ACAAATCTCGGTGTTGTGCC 59.048 50.000 0.00 0.00 34.28 5.01
3903 6710 1.238439 CAAATCTCGGTGTTGTGCCT 58.762 50.000 0.00 0.00 0.00 4.75
3904 6711 1.197721 CAAATCTCGGTGTTGTGCCTC 59.802 52.381 0.00 0.00 0.00 4.70
3905 6712 0.670546 AATCTCGGTGTTGTGCCTCG 60.671 55.000 0.00 0.00 0.00 4.63
3906 6713 1.816863 ATCTCGGTGTTGTGCCTCGT 61.817 55.000 0.00 0.00 0.00 4.18
3907 6714 2.279851 TCGGTGTTGTGCCTCGTG 60.280 61.111 0.00 0.00 0.00 4.35
3908 6715 2.587753 CGGTGTTGTGCCTCGTGT 60.588 61.111 0.00 0.00 0.00 4.49
3909 6716 2.881266 CGGTGTTGTGCCTCGTGTG 61.881 63.158 0.00 0.00 0.00 3.82
3910 6717 1.522806 GGTGTTGTGCCTCGTGTGA 60.523 57.895 0.00 0.00 0.00 3.58
3911 6718 0.884704 GGTGTTGTGCCTCGTGTGAT 60.885 55.000 0.00 0.00 0.00 3.06
3912 6719 0.944386 GTGTTGTGCCTCGTGTGATT 59.056 50.000 0.00 0.00 0.00 2.57
3913 6720 0.943673 TGTTGTGCCTCGTGTGATTG 59.056 50.000 0.00 0.00 0.00 2.67
3914 6721 0.385974 GTTGTGCCTCGTGTGATTGC 60.386 55.000 0.00 0.00 0.00 3.56
3915 6722 0.534877 TTGTGCCTCGTGTGATTGCT 60.535 50.000 0.00 0.00 0.00 3.91
3916 6723 0.534877 TGTGCCTCGTGTGATTGCTT 60.535 50.000 0.00 0.00 0.00 3.91
3917 6724 0.110056 GTGCCTCGTGTGATTGCTTG 60.110 55.000 0.00 0.00 0.00 4.01
3918 6725 1.236616 TGCCTCGTGTGATTGCTTGG 61.237 55.000 0.00 0.00 0.00 3.61
3919 6726 1.237285 GCCTCGTGTGATTGCTTGGT 61.237 55.000 0.00 0.00 0.00 3.67
3920 6727 0.798776 CCTCGTGTGATTGCTTGGTC 59.201 55.000 0.00 0.00 0.00 4.02
3921 6728 0.798776 CTCGTGTGATTGCTTGGTCC 59.201 55.000 0.00 0.00 0.00 4.46
3922 6729 0.396435 TCGTGTGATTGCTTGGTCCT 59.604 50.000 0.00 0.00 0.00 3.85
3923 6730 1.621317 TCGTGTGATTGCTTGGTCCTA 59.379 47.619 0.00 0.00 0.00 2.94
3924 6731 2.002586 CGTGTGATTGCTTGGTCCTAG 58.997 52.381 0.00 0.00 0.00 3.02
3925 6732 2.359900 GTGTGATTGCTTGGTCCTAGG 58.640 52.381 0.82 0.82 0.00 3.02
3926 6733 1.985159 TGTGATTGCTTGGTCCTAGGT 59.015 47.619 9.08 0.00 0.00 3.08
3927 6734 3.055385 GTGTGATTGCTTGGTCCTAGGTA 60.055 47.826 9.08 0.00 0.00 3.08
3928 6735 3.197766 TGTGATTGCTTGGTCCTAGGTAG 59.802 47.826 9.08 3.85 0.00 3.18
3929 6736 3.451178 GTGATTGCTTGGTCCTAGGTAGA 59.549 47.826 9.08 0.00 0.00 2.59
3930 6737 4.101741 GTGATTGCTTGGTCCTAGGTAGAT 59.898 45.833 9.08 0.00 0.00 1.98
3931 6738 4.345257 TGATTGCTTGGTCCTAGGTAGATC 59.655 45.833 9.08 3.74 0.00 2.75
3932 6739 2.307768 TGCTTGGTCCTAGGTAGATCG 58.692 52.381 9.08 0.00 0.00 3.69
3933 6740 2.092049 TGCTTGGTCCTAGGTAGATCGA 60.092 50.000 9.08 0.00 0.00 3.59
3934 6741 2.293955 GCTTGGTCCTAGGTAGATCGAC 59.706 54.545 9.08 0.00 0.00 4.20
3935 6742 2.251409 TGGTCCTAGGTAGATCGACG 57.749 55.000 9.08 0.00 0.00 5.12
3936 6743 1.202734 TGGTCCTAGGTAGATCGACGG 60.203 57.143 9.08 0.00 0.00 4.79
3937 6744 1.071385 GGTCCTAGGTAGATCGACGGA 59.929 57.143 9.08 0.00 0.00 4.69
3938 6745 2.415776 GTCCTAGGTAGATCGACGGAG 58.584 57.143 9.08 0.08 0.00 4.63
3939 6746 1.158434 CCTAGGTAGATCGACGGAGC 58.842 60.000 0.00 0.00 0.00 4.70
3940 6747 0.791422 CTAGGTAGATCGACGGAGCG 59.209 60.000 0.00 0.00 32.66 5.03
3941 6748 1.226686 TAGGTAGATCGACGGAGCGC 61.227 60.000 0.00 0.00 32.66 5.92
3942 6749 2.051166 GTAGATCGACGGAGCGCC 60.051 66.667 2.29 0.00 32.66 6.53
3943 6750 2.203167 TAGATCGACGGAGCGCCT 60.203 61.111 2.29 0.00 32.66 5.52
3944 6751 1.822613 TAGATCGACGGAGCGCCTT 60.823 57.895 2.29 0.00 32.66 4.35
3945 6752 2.060004 TAGATCGACGGAGCGCCTTG 62.060 60.000 2.29 0.00 32.66 3.61
3946 6753 4.514577 ATCGACGGAGCGCCTTGG 62.515 66.667 2.29 0.00 0.00 3.61
3948 6755 4.514577 CGACGGAGCGCCTTGGAT 62.515 66.667 2.29 0.00 0.00 3.41
3949 6756 2.125106 GACGGAGCGCCTTGGATT 60.125 61.111 2.29 0.00 0.00 3.01
3950 6757 1.745489 GACGGAGCGCCTTGGATTT 60.745 57.895 2.29 0.00 0.00 2.17
3951 6758 0.461339 GACGGAGCGCCTTGGATTTA 60.461 55.000 2.29 0.00 0.00 1.40
3952 6759 0.180406 ACGGAGCGCCTTGGATTTAT 59.820 50.000 2.29 0.00 0.00 1.40
3953 6760 1.308998 CGGAGCGCCTTGGATTTATT 58.691 50.000 2.29 0.00 0.00 1.40
3954 6761 1.264288 CGGAGCGCCTTGGATTTATTC 59.736 52.381 2.29 0.00 0.00 1.75
3955 6762 2.576615 GGAGCGCCTTGGATTTATTCT 58.423 47.619 2.29 0.00 0.00 2.40
3956 6763 3.740115 GGAGCGCCTTGGATTTATTCTA 58.260 45.455 2.29 0.00 0.00 2.10
4040 6848 3.057946 GGAAAACACAGAAAGCCTAGCTG 60.058 47.826 0.00 0.00 39.62 4.24
4041 6849 3.492102 AAACACAGAAAGCCTAGCTGA 57.508 42.857 0.00 0.00 39.62 4.26
4042 6850 3.492102 AACACAGAAAGCCTAGCTGAA 57.508 42.857 0.00 0.00 39.62 3.02
4043 6851 3.492102 ACACAGAAAGCCTAGCTGAAA 57.508 42.857 0.00 0.00 39.62 2.69
4044 6852 3.406764 ACACAGAAAGCCTAGCTGAAAG 58.593 45.455 0.00 0.00 39.62 2.62
4063 6871 0.375106 GCCTGAAACTATCTGCACGC 59.625 55.000 0.00 0.00 0.00 5.34
4321 8884 4.869861 GTGTGTGAAAAGAAATGCAAGGTT 59.130 37.500 0.00 0.00 0.00 3.50
4488 9053 8.075574 TCAGTATTTGATGTTTGACATGTGTTC 58.924 33.333 1.15 0.00 39.27 3.18
4617 9217 4.851639 AGAACATGGCAGTAGGAGAAAT 57.148 40.909 0.00 0.00 0.00 2.17
4689 9296 9.971922 ATACAATTATTATCTTTGAAGCCTTGC 57.028 29.630 0.00 0.00 0.00 4.01
4692 9307 8.761497 CAATTATTATCTTTGAAGCCTTGCATG 58.239 33.333 0.00 0.00 0.00 4.06
4696 9311 2.768503 TTTGAAGCCTTGCATGCGGC 62.769 55.000 24.36 24.36 46.65 6.53
4800 9417 9.278978 TGTTACTTTCAGTGCTGATTTAATACA 57.721 29.630 2.47 2.19 39.64 2.29
5061 9683 0.391661 GGGCGATGTGAGTGTGACAT 60.392 55.000 0.00 0.00 36.73 3.06
5134 9761 8.426881 TTGGCTAATTAACAAGTTTTGGTTTC 57.573 30.769 0.00 0.00 34.12 2.78
5150 9777 8.306761 GTTTTGGTTTCTGATTCATTGTAGGAT 58.693 33.333 0.00 0.00 0.00 3.24
5255 9882 1.139520 GGGTAGCGCCTTTGCAATG 59.860 57.895 2.29 1.92 37.32 2.82
5309 9937 5.891551 GCAGTTGGAATTAGGGATTTTCCTA 59.108 40.000 0.00 0.00 39.72 2.94
5522 10156 7.536895 TTTCAAAAACTGAAATGTGATGGTG 57.463 32.000 0.00 0.00 46.80 4.17
5599 10248 3.499338 ACATTGATGGACCTTGCTTGAA 58.501 40.909 0.00 0.00 0.00 2.69
5745 10400 9.169592 TCATATAGCTTACAAAAACTAACCCAC 57.830 33.333 0.00 0.00 0.00 4.61
5789 10446 1.661821 GCCCAGCGCTATGTAGACG 60.662 63.158 10.99 0.00 0.00 4.18
5827 10487 1.319172 CATGACGCGCGATAGACTAC 58.681 55.000 39.36 15.78 39.76 2.73
5833 10493 4.019919 ACGCGCGATAGACTACTAAAAA 57.980 40.909 39.36 0.00 39.76 1.94
5864 10524 8.809468 AATGACCTCTAAAGATTCCCTAAAAC 57.191 34.615 0.00 0.00 0.00 2.43
5896 10557 7.028926 TGTAAGCGATGGTTTCTTTTGTTTA 57.971 32.000 0.00 0.00 0.00 2.01
6181 10866 2.354729 GGCCGGCCCATATGCATA 59.645 61.111 36.64 9.27 0.00 3.14
6206 10891 4.475135 GGAGGAGGTCCGCTTGCC 62.475 72.222 0.00 0.00 42.08 4.52
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
184 207 4.100084 CCCCTGGCACATCTCGCA 62.100 66.667 0.00 0.00 38.20 5.10
222 245 0.673437 AAATTGTGCACCGGTTCCAG 59.327 50.000 15.69 0.00 0.00 3.86
223 246 1.115467 AAAATTGTGCACCGGTTCCA 58.885 45.000 15.69 1.53 0.00 3.53
225 248 2.217429 ACAAAATTGTGCACCGGTTC 57.783 45.000 15.69 0.00 40.49 3.62
227 250 1.472376 CCAACAAAATTGTGCACCGGT 60.472 47.619 15.69 0.00 41.31 5.28
229 252 2.215907 TCCAACAAAATTGTGCACCG 57.784 45.000 15.69 0.00 41.31 4.94
231 254 3.184178 CCGATTCCAACAAAATTGTGCAC 59.816 43.478 10.75 10.75 41.31 4.57
232 255 3.388308 CCGATTCCAACAAAATTGTGCA 58.612 40.909 0.00 0.00 41.31 4.57
233 256 2.157474 GCCGATTCCAACAAAATTGTGC 59.843 45.455 0.00 0.00 41.31 4.57
244 267 0.605589 AAATTTGGCGCCGATTCCAA 59.394 45.000 23.90 6.19 40.31 3.53
276 299 4.178214 CCGTAGCCGTCGCCGTAA 62.178 66.667 0.00 0.00 34.57 3.18
502 525 2.226962 TTCCCTACTAGCTCGTGGTT 57.773 50.000 0.22 0.00 0.00 3.67
504 527 2.032620 ACATTCCCTACTAGCTCGTGG 58.967 52.381 0.22 0.00 0.00 4.94
507 530 2.799917 GCACACATTCCCTACTAGCTCG 60.800 54.545 0.00 0.00 0.00 5.03
508 531 2.799917 CGCACACATTCCCTACTAGCTC 60.800 54.545 0.00 0.00 0.00 4.09
509 532 1.137086 CGCACACATTCCCTACTAGCT 59.863 52.381 0.00 0.00 0.00 3.32
510 533 1.571919 CGCACACATTCCCTACTAGC 58.428 55.000 0.00 0.00 0.00 3.42
511 534 1.806623 GCCGCACACATTCCCTACTAG 60.807 57.143 0.00 0.00 0.00 2.57
512 535 0.177141 GCCGCACACATTCCCTACTA 59.823 55.000 0.00 0.00 0.00 1.82
515 539 1.078497 CAGCCGCACACATTCCCTA 60.078 57.895 0.00 0.00 0.00 3.53
523 547 4.683334 GAAACGCCAGCCGCACAC 62.683 66.667 0.00 0.00 41.76 3.82
552 576 2.358737 CGAGAAACGCCAGCCCTT 60.359 61.111 0.00 0.00 34.51 3.95
561 585 1.529802 CTCTCTTCTCGCGAGAAACG 58.470 55.000 41.10 33.90 45.75 3.60
562 586 1.468395 CCCTCTCTTCTCGCGAGAAAC 60.468 57.143 41.10 0.00 45.75 2.78
563 587 0.811915 CCCTCTCTTCTCGCGAGAAA 59.188 55.000 41.10 31.19 45.75 2.52
564 588 0.035343 TCCCTCTCTTCTCGCGAGAA 60.035 55.000 40.12 40.12 44.47 2.87
565 589 0.745128 GTCCCTCTCTTCTCGCGAGA 60.745 60.000 33.84 33.84 36.22 4.04
566 590 1.725066 GTCCCTCTCTTCTCGCGAG 59.275 63.158 30.03 30.03 0.00 5.03
567 591 2.107292 CGTCCCTCTCTTCTCGCGA 61.107 63.158 9.26 9.26 0.00 5.87
568 592 2.400158 ACGTCCCTCTCTTCTCGCG 61.400 63.158 0.00 0.00 0.00 5.87
569 593 1.137825 CACGTCCCTCTCTTCTCGC 59.862 63.158 0.00 0.00 0.00 5.03
570 594 1.137825 GCACGTCCCTCTCTTCTCG 59.862 63.158 0.00 0.00 0.00 4.04
571 595 1.137825 CGCACGTCCCTCTCTTCTC 59.862 63.158 0.00 0.00 0.00 2.87
572 596 2.995872 GCGCACGTCCCTCTCTTCT 61.996 63.158 0.30 0.00 0.00 2.85
573 597 2.507324 GCGCACGTCCCTCTCTTC 60.507 66.667 0.30 0.00 0.00 2.87
574 598 4.421479 CGCGCACGTCCCTCTCTT 62.421 66.667 8.75 0.00 33.53 2.85
576 600 4.838486 CTCGCGCACGTCCCTCTC 62.838 72.222 8.75 0.00 41.18 3.20
640 664 4.399303 CCTTTTGGAAATGGGCAGTACTAG 59.601 45.833 0.00 0.00 44.07 2.57
641 665 4.340617 CCTTTTGGAAATGGGCAGTACTA 58.659 43.478 0.00 0.00 44.07 1.82
642 666 3.165071 CCTTTTGGAAATGGGCAGTACT 58.835 45.455 0.00 0.00 44.07 2.73
643 667 3.592898 CCTTTTGGAAATGGGCAGTAC 57.407 47.619 0.00 0.00 44.07 2.73
656 680 0.392461 TCTCGCGGGAATCCTTTTGG 60.392 55.000 6.00 0.00 42.21 3.28
657 681 1.398390 CTTCTCGCGGGAATCCTTTTG 59.602 52.381 23.81 4.50 0.00 2.44
658 682 1.278127 TCTTCTCGCGGGAATCCTTTT 59.722 47.619 23.81 0.00 0.00 2.27
659 683 0.902531 TCTTCTCGCGGGAATCCTTT 59.097 50.000 23.81 0.00 0.00 3.11
660 684 0.902531 TTCTTCTCGCGGGAATCCTT 59.097 50.000 23.81 0.00 0.00 3.36
661 685 0.461961 CTTCTTCTCGCGGGAATCCT 59.538 55.000 23.81 0.00 0.00 3.24
662 686 0.530870 CCTTCTTCTCGCGGGAATCC 60.531 60.000 23.81 0.00 0.00 3.01
663 687 1.154814 GCCTTCTTCTCGCGGGAATC 61.155 60.000 23.81 5.65 0.00 2.52
664 688 1.153349 GCCTTCTTCTCGCGGGAAT 60.153 57.895 23.81 0.00 0.00 3.01
665 689 2.264794 GCCTTCTTCTCGCGGGAA 59.735 61.111 22.11 22.11 0.00 3.97
666 690 3.771160 GGCCTTCTTCTCGCGGGA 61.771 66.667 3.45 3.45 0.00 5.14
670 694 4.796231 TCGCGGCCTTCTTCTCGC 62.796 66.667 6.13 0.00 44.04 5.03
671 695 2.881352 GTCGCGGCCTTCTTCTCG 60.881 66.667 6.13 0.00 0.00 4.04
672 696 2.881352 CGTCGCGGCCTTCTTCTC 60.881 66.667 4.51 0.00 0.00 2.87
675 699 4.760047 ATGCGTCGCGGCCTTCTT 62.760 61.111 13.38 0.00 0.00 2.52
770 794 4.796231 AGATCGGCACCACGCGAC 62.796 66.667 15.93 0.00 43.84 5.19
771 795 4.794439 CAGATCGGCACCACGCGA 62.794 66.667 15.93 0.00 43.84 5.87
786 810 1.253593 GCCCCCTTTTCTGCCTTCAG 61.254 60.000 0.00 0.00 41.67 3.02
842 866 1.001520 CAAAAATGGTTTCCGGGGGAC 59.998 52.381 0.00 0.00 0.00 4.46
843 867 1.343069 CAAAAATGGTTTCCGGGGGA 58.657 50.000 0.00 0.00 0.00 4.81
889 920 0.688087 ACAGGGGAGTAGCTGTAGGC 60.688 60.000 0.00 0.00 42.19 3.93
890 921 1.867363 AACAGGGGAGTAGCTGTAGG 58.133 55.000 0.00 0.00 0.00 3.18
920 951 1.081092 CTTCTCCTCCTCCCCCACA 59.919 63.158 0.00 0.00 0.00 4.17
930 961 1.448717 GGCGGACTTGCTTCTCCTC 60.449 63.158 0.00 0.00 34.52 3.71
1005 1047 4.228567 GCCAGCGGGAGTAGCCTC 62.229 72.222 7.23 0.00 35.59 4.70
1078 1120 3.637229 GGTGGGATCTCGTTCAGATAAGA 59.363 47.826 0.00 0.00 42.48 2.10
1086 1128 0.179097 GCAGAGGTGGGATCTCGTTC 60.179 60.000 0.00 0.00 36.45 3.95
1131 1173 3.181967 CTTCCGAGGTTCGCTGCG 61.182 66.667 17.25 17.25 38.82 5.18
1134 1176 0.173708 CTAAGCTTCCGAGGTTCGCT 59.826 55.000 0.00 0.00 42.31 4.93
1151 1193 2.649831 GACAGGTCGTCACCCACTA 58.350 57.895 0.00 0.00 45.12 2.74
1152 1194 3.456317 GACAGGTCGTCACCCACT 58.544 61.111 0.00 0.00 45.12 4.00
1161 1203 3.685214 CTTCGCGGAGGACAGGTCG 62.685 68.421 6.48 0.00 0.00 4.79
1175 1217 2.316687 GGATTCGTTCGCGCTTCG 59.683 61.111 5.56 7.64 41.05 3.79
1178 1220 2.813908 GGTGGATTCGTTCGCGCT 60.814 61.111 5.56 0.00 41.05 5.92
1179 1221 3.115892 TGGTGGATTCGTTCGCGC 61.116 61.111 0.00 0.00 41.05 6.86
1181 1223 2.396157 GGGTGGTGGATTCGTTCGC 61.396 63.158 0.00 0.00 0.00 4.70
1182 1224 1.743995 GGGGTGGTGGATTCGTTCG 60.744 63.158 0.00 0.00 0.00 3.95
1183 1225 1.743995 CGGGGTGGTGGATTCGTTC 60.744 63.158 0.00 0.00 0.00 3.95
1184 1226 2.349755 CGGGGTGGTGGATTCGTT 59.650 61.111 0.00 0.00 0.00 3.85
1185 1227 3.712907 CCGGGGTGGTGGATTCGT 61.713 66.667 0.00 0.00 0.00 3.85
1187 1229 2.271173 GTCCGGGGTGGTGGATTC 59.729 66.667 0.00 0.00 39.52 2.52
1188 1230 3.335729 GGTCCGGGGTGGTGGATT 61.336 66.667 0.00 0.00 39.52 3.01
1189 1231 4.348495 AGGTCCGGGGTGGTGGAT 62.348 66.667 0.00 0.00 39.52 3.41
1192 1234 3.009115 ATCAGGTCCGGGGTGGTG 61.009 66.667 0.00 0.00 39.52 4.17
1193 1235 3.009115 CATCAGGTCCGGGGTGGT 61.009 66.667 0.00 0.00 39.52 4.16
1194 1236 3.797353 CCATCAGGTCCGGGGTGG 61.797 72.222 0.00 0.00 40.09 4.61
1195 1237 2.687200 TCCATCAGGTCCGGGGTG 60.687 66.667 0.00 0.00 35.89 4.61
1196 1238 2.365635 CTCCATCAGGTCCGGGGT 60.366 66.667 0.00 0.00 35.89 4.95
1197 1239 3.164269 CCTCCATCAGGTCCGGGG 61.164 72.222 0.00 0.00 37.53 5.73
1198 1240 3.164269 CCCTCCATCAGGTCCGGG 61.164 72.222 0.00 0.00 41.51 5.73
1199 1241 3.164269 CCCCTCCATCAGGTCCGG 61.164 72.222 0.00 0.00 41.51 5.14
1200 1242 3.866582 GCCCCTCCATCAGGTCCG 61.867 72.222 0.00 0.00 41.51 4.79
1201 1243 3.493303 GGCCCCTCCATCAGGTCC 61.493 72.222 0.00 0.00 41.51 4.46
1202 1244 2.367512 AGGCCCCTCCATCAGGTC 60.368 66.667 0.00 0.00 41.51 3.85
1203 1245 2.367512 GAGGCCCCTCCATCAGGT 60.368 66.667 0.00 0.00 41.51 4.00
1204 1246 3.554342 CGAGGCCCCTCCATCAGG 61.554 72.222 8.68 0.00 43.01 3.86
1205 1247 3.554342 CCGAGGCCCCTCCATCAG 61.554 72.222 8.68 0.00 39.77 2.90
1238 1280 1.522355 GCTCGCCATCTAGCTGCAA 60.522 57.895 1.02 0.00 35.80 4.08
1251 1293 2.136196 CTATCAGAGGACGGGCTCGC 62.136 65.000 5.51 0.00 40.63 5.03
1269 1311 7.324178 AGCTATTCGTTTTTCAGTATCAGTCT 58.676 34.615 0.00 0.00 0.00 3.24
1270 1312 7.527084 AGCTATTCGTTTTTCAGTATCAGTC 57.473 36.000 0.00 0.00 0.00 3.51
1271 1313 7.148407 CCAAGCTATTCGTTTTTCAGTATCAGT 60.148 37.037 0.00 0.00 0.00 3.41
1272 1314 7.064609 TCCAAGCTATTCGTTTTTCAGTATCAG 59.935 37.037 0.00 0.00 0.00 2.90
1273 1315 6.876789 TCCAAGCTATTCGTTTTTCAGTATCA 59.123 34.615 0.00 0.00 0.00 2.15
1275 1317 7.527457 GTTCCAAGCTATTCGTTTTTCAGTAT 58.473 34.615 0.00 0.00 0.00 2.12
1285 1337 3.596214 ACATTCGTTCCAAGCTATTCGT 58.404 40.909 0.00 0.00 0.00 3.85
1302 1354 2.509548 TGGGATGAAGGGATCGAACATT 59.490 45.455 0.00 0.00 0.00 2.71
1304 1356 1.578897 TGGGATGAAGGGATCGAACA 58.421 50.000 0.00 0.00 0.00 3.18
1320 1372 2.028748 CCCAAGCAGAGAAAAACATGGG 60.029 50.000 0.00 0.00 40.23 4.00
1321 1373 2.892852 TCCCAAGCAGAGAAAAACATGG 59.107 45.455 0.00 0.00 0.00 3.66
1351 1465 1.430992 TAATGCTAGTAGGGGTGGGC 58.569 55.000 0.00 0.00 0.00 5.36
1381 1495 2.178474 GCCAACTGCGTAACATCATG 57.822 50.000 0.00 0.00 0.00 3.07
1577 2107 5.488341 GAACCTGTGATAGTACAACACCAT 58.512 41.667 12.17 0.00 34.18 3.55
1578 2108 4.559906 CGAACCTGTGATAGTACAACACCA 60.560 45.833 12.17 0.00 34.18 4.17
1579 2109 3.924686 CGAACCTGTGATAGTACAACACC 59.075 47.826 12.17 0.29 34.18 4.16
1580 2110 4.553323 ACGAACCTGTGATAGTACAACAC 58.447 43.478 0.00 3.02 35.45 3.32
1581 2111 4.859304 ACGAACCTGTGATAGTACAACA 57.141 40.909 0.00 0.00 0.00 3.33
1582 2112 5.574443 GGTAACGAACCTGTGATAGTACAAC 59.426 44.000 0.00 0.00 45.75 3.32
1583 2113 5.713025 GGTAACGAACCTGTGATAGTACAA 58.287 41.667 0.00 0.00 45.75 2.41
1584 2114 5.314923 GGTAACGAACCTGTGATAGTACA 57.685 43.478 0.00 0.00 45.75 2.90
1669 2199 0.679640 CGGGACCCATTAAGCTTGCA 60.680 55.000 12.15 0.00 0.00 4.08
2297 4391 3.635373 CAGTATAGTTTGCGAGGTAGGGA 59.365 47.826 0.00 0.00 0.00 4.20
2346 4442 1.463674 AATGGTGCCTCGATGGAAAC 58.536 50.000 5.24 0.00 38.35 2.78
2347 4443 2.214376 AAATGGTGCCTCGATGGAAA 57.786 45.000 5.24 0.00 38.35 3.13
2391 4492 1.134401 TGCACGGAAGAGGATGATTCC 60.134 52.381 0.00 0.00 42.96 3.01
2493 4594 5.878406 GGAGATCCTCCTTTTCTGATGTA 57.122 43.478 5.78 0.00 46.41 2.29
2621 4746 2.287909 GGTCAGTGCAATTAAAACGGCA 60.288 45.455 0.00 0.00 0.00 5.69
2653 4778 6.894339 AGGTATTGGAGAAAAACAACGATT 57.106 33.333 0.00 0.00 0.00 3.34
2654 4779 6.677913 CAAGGTATTGGAGAAAAACAACGAT 58.322 36.000 0.00 0.00 32.43 3.73
2732 4861 1.280206 GCACTCGTGGTGGTAACGAC 61.280 60.000 11.68 0.00 44.58 4.34
2760 4889 9.911788 ACATACTACCTTGATCATCTTCAATTT 57.088 29.630 0.00 0.00 35.20 1.82
2819 4953 2.133641 AGCACCAAAGGCCCAACAC 61.134 57.895 0.00 0.00 0.00 3.32
2911 5045 1.000060 GGCCTGTTTAAAAACGGACCC 60.000 52.381 14.56 10.71 45.87 4.46
3048 5184 3.366396 TGCGAAGATAGGATATCCTCCC 58.634 50.000 27.86 19.20 44.77 4.30
3186 5369 8.969267 CACTGTTGTAGTTAGAACTTAGAACAG 58.031 37.037 23.15 23.15 41.97 3.16
3333 5545 6.579666 AGCGCCAAATGATACAATCAATAT 57.420 33.333 2.29 0.00 43.50 1.28
3336 5548 5.826601 TTAGCGCCAAATGATACAATCAA 57.173 34.783 2.29 0.00 43.50 2.57
3362 5681 9.569122 GGGTTCAAATATACAGTGTTACCATAT 57.431 33.333 0.00 0.00 0.00 1.78
3363 5682 7.711772 CGGGTTCAAATATACAGTGTTACCATA 59.288 37.037 0.00 0.00 0.00 2.74
3364 5683 6.540914 CGGGTTCAAATATACAGTGTTACCAT 59.459 38.462 0.00 0.00 0.00 3.55
3365 5684 5.875910 CGGGTTCAAATATACAGTGTTACCA 59.124 40.000 0.00 0.00 0.00 3.25
3366 5685 6.108015 TCGGGTTCAAATATACAGTGTTACC 58.892 40.000 0.00 0.00 0.00 2.85
3367 5686 7.599630 TTCGGGTTCAAATATACAGTGTTAC 57.400 36.000 0.00 0.00 0.00 2.50
3373 5692 7.417612 CCTGATTTTCGGGTTCAAATATACAG 58.582 38.462 0.00 0.00 38.13 2.74
3420 5906 6.109359 GCAAATAGTCAGGACACACTAAGAT 58.891 40.000 1.84 0.00 0.00 2.40
3481 5967 7.992180 AAACTTGAAACAGAGCAATTTGTAG 57.008 32.000 0.00 0.00 0.00 2.74
3489 5975 5.398603 TTTCCAAAACTTGAAACAGAGCA 57.601 34.783 0.00 0.00 0.00 4.26
3568 6061 7.728148 TGCCCTTATAAATCGTGTTATGTCTA 58.272 34.615 4.33 0.00 0.00 2.59
3658 6464 3.119316 AGAGAGCAACACCGACTTATGAG 60.119 47.826 0.00 0.00 0.00 2.90
3680 6486 4.263572 CGTCACCAGGCCCAACCA 62.264 66.667 0.00 0.00 43.14 3.67
3732 6539 4.377022 CCGTGCTATTATGTTACGCAATCC 60.377 45.833 0.00 0.00 33.76 3.01
3733 6540 4.377022 CCCGTGCTATTATGTTACGCAATC 60.377 45.833 0.00 0.00 33.76 2.67
3798 6605 1.410737 CGTCACAATACCGCACTCCG 61.411 60.000 0.00 0.00 0.00 4.63
3799 6606 1.082117 CCGTCACAATACCGCACTCC 61.082 60.000 0.00 0.00 0.00 3.85
3800 6607 0.389426 ACCGTCACAATACCGCACTC 60.389 55.000 0.00 0.00 0.00 3.51
3801 6608 0.669318 CACCGTCACAATACCGCACT 60.669 55.000 0.00 0.00 0.00 4.40
3802 6609 0.947180 ACACCGTCACAATACCGCAC 60.947 55.000 0.00 0.00 0.00 5.34
3803 6610 0.668096 GACACCGTCACAATACCGCA 60.668 55.000 0.00 0.00 32.09 5.69
3804 6611 0.668096 TGACACCGTCACAATACCGC 60.668 55.000 0.00 0.00 37.67 5.68
3805 6612 3.500455 TGACACCGTCACAATACCG 57.500 52.632 0.00 0.00 37.67 4.02
3813 6620 3.299977 CTCCCCGTGACACCGTCA 61.300 66.667 0.00 0.00 40.50 4.35
3814 6621 4.065281 CCTCCCCGTGACACCGTC 62.065 72.222 0.00 0.00 0.00 4.79
3815 6622 4.608774 TCCTCCCCGTGACACCGT 62.609 66.667 0.00 0.00 0.00 4.83
3816 6623 3.760035 CTCCTCCCCGTGACACCG 61.760 72.222 0.00 0.00 0.00 4.94
3817 6624 4.083862 GCTCCTCCCCGTGACACC 62.084 72.222 0.00 0.00 0.00 4.16
3818 6625 4.436998 CGCTCCTCCCCGTGACAC 62.437 72.222 0.00 0.00 0.00 3.67
3827 6634 3.902086 GACTACGGGCGCTCCTCC 61.902 72.222 7.64 0.00 0.00 4.30
3828 6635 3.127352 CTGACTACGGGCGCTCCTC 62.127 68.421 7.64 1.25 0.00 3.71
3829 6636 3.141488 CTGACTACGGGCGCTCCT 61.141 66.667 7.64 0.00 0.00 3.69
3830 6637 4.208686 CCTGACTACGGGCGCTCC 62.209 72.222 7.64 6.04 35.63 4.70
3839 6646 4.791069 TCCCCGGGGCCTGACTAC 62.791 72.222 36.68 0.00 34.68 2.73
3840 6647 3.774336 ATCCCCGGGGCCTGACTA 61.774 66.667 36.68 16.98 34.68 2.59
3843 6650 4.096816 TACATCCCCGGGGCCTGA 62.097 66.667 35.53 22.46 34.68 3.86
3844 6651 3.560251 CTACATCCCCGGGGCCTG 61.560 72.222 36.68 32.77 34.68 4.85
3848 6655 0.914417 ATATGGCTACATCCCCGGGG 60.914 60.000 35.80 35.80 38.53 5.73
3849 6656 0.541863 GATATGGCTACATCCCCGGG 59.458 60.000 15.80 15.80 38.53 5.73
3850 6657 0.175760 CGATATGGCTACATCCCCGG 59.824 60.000 0.00 0.00 38.53 5.73
3851 6658 0.175760 CCGATATGGCTACATCCCCG 59.824 60.000 0.00 0.00 38.53 5.73
3852 6659 1.066143 CACCGATATGGCTACATCCCC 60.066 57.143 0.00 0.00 43.94 4.81
3853 6660 1.899814 TCACCGATATGGCTACATCCC 59.100 52.381 0.00 0.00 43.94 3.85
3854 6661 3.326747 GTTCACCGATATGGCTACATCC 58.673 50.000 0.00 0.00 43.94 3.51
3855 6662 3.006967 AGGTTCACCGATATGGCTACATC 59.993 47.826 0.00 0.00 43.94 3.06
3856 6663 2.972713 AGGTTCACCGATATGGCTACAT 59.027 45.455 0.00 0.00 43.94 2.29
3857 6664 2.394632 AGGTTCACCGATATGGCTACA 58.605 47.619 0.00 0.00 43.94 2.74
3858 6665 3.131396 CAAGGTTCACCGATATGGCTAC 58.869 50.000 0.00 0.00 43.94 3.58
3859 6666 2.769663 ACAAGGTTCACCGATATGGCTA 59.230 45.455 0.00 0.00 43.94 3.93
3860 6667 1.559682 ACAAGGTTCACCGATATGGCT 59.440 47.619 0.00 0.00 43.94 4.75
3861 6668 2.038387 ACAAGGTTCACCGATATGGC 57.962 50.000 0.00 0.00 43.94 4.40
3862 6669 4.938832 TGTTAACAAGGTTCACCGATATGG 59.061 41.667 5.64 0.00 46.41 2.74
3863 6670 6.489127 TTGTTAACAAGGTTCACCGATATG 57.511 37.500 17.01 0.00 42.08 1.78
3864 6671 7.610305 AGATTTGTTAACAAGGTTCACCGATAT 59.390 33.333 19.72 7.20 42.08 1.63
3865 6672 6.938030 AGATTTGTTAACAAGGTTCACCGATA 59.062 34.615 19.72 2.62 42.08 2.92
3866 6673 5.768164 AGATTTGTTAACAAGGTTCACCGAT 59.232 36.000 19.72 8.35 42.08 4.18
3867 6674 5.127491 AGATTTGTTAACAAGGTTCACCGA 58.873 37.500 19.72 3.81 42.08 4.69
3868 6675 5.432885 AGATTTGTTAACAAGGTTCACCG 57.567 39.130 19.72 0.00 42.08 4.94
3869 6676 5.449304 CGAGATTTGTTAACAAGGTTCACC 58.551 41.667 19.72 12.68 37.15 4.02
3870 6677 5.008316 ACCGAGATTTGTTAACAAGGTTCAC 59.992 40.000 19.72 14.85 37.15 3.18
3871 6678 5.008217 CACCGAGATTTGTTAACAAGGTTCA 59.992 40.000 20.70 8.81 37.15 3.18
3872 6679 5.008316 ACACCGAGATTTGTTAACAAGGTTC 59.992 40.000 20.70 17.70 37.15 3.62
3873 6680 4.885325 ACACCGAGATTTGTTAACAAGGTT 59.115 37.500 20.70 11.66 37.15 3.50
3874 6681 4.457466 ACACCGAGATTTGTTAACAAGGT 58.543 39.130 19.72 19.09 37.15 3.50
3875 6682 5.212194 CAACACCGAGATTTGTTAACAAGG 58.788 41.667 19.72 18.51 37.15 3.61
3876 6683 5.681105 CACAACACCGAGATTTGTTAACAAG 59.319 40.000 19.72 10.61 37.15 3.16
3877 6684 5.574082 CACAACACCGAGATTTGTTAACAA 58.426 37.500 17.01 17.01 34.12 2.83
3878 6685 4.496673 GCACAACACCGAGATTTGTTAACA 60.497 41.667 3.59 3.59 34.12 2.41
3879 6686 3.972502 GCACAACACCGAGATTTGTTAAC 59.027 43.478 0.00 0.00 34.12 2.01
3880 6687 3.003897 GGCACAACACCGAGATTTGTTAA 59.996 43.478 0.00 0.00 34.12 2.01
3881 6688 2.550606 GGCACAACACCGAGATTTGTTA 59.449 45.455 0.00 0.00 34.12 2.41
3882 6689 1.336755 GGCACAACACCGAGATTTGTT 59.663 47.619 0.00 0.00 36.35 2.83
3883 6690 0.951558 GGCACAACACCGAGATTTGT 59.048 50.000 0.00 0.00 33.69 2.83
3884 6691 1.197721 GAGGCACAACACCGAGATTTG 59.802 52.381 0.00 0.00 0.00 2.32
3885 6692 1.523758 GAGGCACAACACCGAGATTT 58.476 50.000 0.00 0.00 0.00 2.17
3886 6693 0.670546 CGAGGCACAACACCGAGATT 60.671 55.000 0.00 0.00 0.00 2.40
3887 6694 1.079819 CGAGGCACAACACCGAGAT 60.080 57.895 0.00 0.00 0.00 2.75
3888 6695 2.338620 CGAGGCACAACACCGAGA 59.661 61.111 0.00 0.00 0.00 4.04
3889 6696 2.029073 ACGAGGCACAACACCGAG 59.971 61.111 0.00 0.00 0.00 4.63
3890 6697 2.279851 CACGAGGCACAACACCGA 60.280 61.111 0.00 0.00 0.00 4.69
3891 6698 2.587753 ACACGAGGCACAACACCG 60.588 61.111 0.00 0.00 0.00 4.94
3892 6699 0.884704 ATCACACGAGGCACAACACC 60.885 55.000 0.00 0.00 0.00 4.16
3893 6700 0.944386 AATCACACGAGGCACAACAC 59.056 50.000 0.00 0.00 0.00 3.32
3894 6701 0.943673 CAATCACACGAGGCACAACA 59.056 50.000 0.00 0.00 0.00 3.33
3895 6702 0.385974 GCAATCACACGAGGCACAAC 60.386 55.000 0.00 0.00 0.00 3.32
3896 6703 0.534877 AGCAATCACACGAGGCACAA 60.535 50.000 0.00 0.00 0.00 3.33
3897 6704 0.534877 AAGCAATCACACGAGGCACA 60.535 50.000 0.00 0.00 0.00 4.57
3898 6705 0.110056 CAAGCAATCACACGAGGCAC 60.110 55.000 0.00 0.00 0.00 5.01
3899 6706 1.236616 CCAAGCAATCACACGAGGCA 61.237 55.000 0.00 0.00 0.00 4.75
3900 6707 1.237285 ACCAAGCAATCACACGAGGC 61.237 55.000 0.00 0.00 0.00 4.70
3901 6708 0.798776 GACCAAGCAATCACACGAGG 59.201 55.000 0.00 0.00 0.00 4.63
3902 6709 0.798776 GGACCAAGCAATCACACGAG 59.201 55.000 0.00 0.00 0.00 4.18
3903 6710 0.396435 AGGACCAAGCAATCACACGA 59.604 50.000 0.00 0.00 0.00 4.35
3904 6711 2.002586 CTAGGACCAAGCAATCACACG 58.997 52.381 0.00 0.00 0.00 4.49
3905 6712 2.290323 ACCTAGGACCAAGCAATCACAC 60.290 50.000 17.98 0.00 0.00 3.82
3906 6713 1.985159 ACCTAGGACCAAGCAATCACA 59.015 47.619 17.98 0.00 0.00 3.58
3907 6714 2.789409 ACCTAGGACCAAGCAATCAC 57.211 50.000 17.98 0.00 0.00 3.06
3908 6715 3.719871 TCTACCTAGGACCAAGCAATCA 58.280 45.455 17.98 0.00 0.00 2.57
3909 6716 4.559704 CGATCTACCTAGGACCAAGCAATC 60.560 50.000 17.98 5.81 0.00 2.67
3910 6717 3.322254 CGATCTACCTAGGACCAAGCAAT 59.678 47.826 17.98 0.00 0.00 3.56
3911 6718 2.693591 CGATCTACCTAGGACCAAGCAA 59.306 50.000 17.98 0.00 0.00 3.91
3912 6719 2.092049 TCGATCTACCTAGGACCAAGCA 60.092 50.000 17.98 0.00 0.00 3.91
3913 6720 2.293955 GTCGATCTACCTAGGACCAAGC 59.706 54.545 17.98 0.00 0.00 4.01
3914 6721 2.548904 CGTCGATCTACCTAGGACCAAG 59.451 54.545 17.98 7.29 0.00 3.61
3915 6722 2.569059 CGTCGATCTACCTAGGACCAA 58.431 52.381 17.98 0.00 0.00 3.67
3916 6723 1.202734 CCGTCGATCTACCTAGGACCA 60.203 57.143 17.98 0.00 0.00 4.02
3917 6724 1.071385 TCCGTCGATCTACCTAGGACC 59.929 57.143 17.98 0.00 0.00 4.46
3918 6725 2.415776 CTCCGTCGATCTACCTAGGAC 58.584 57.143 17.98 0.00 0.00 3.85
3919 6726 1.270732 GCTCCGTCGATCTACCTAGGA 60.271 57.143 17.98 0.00 0.00 2.94
3920 6727 1.158434 GCTCCGTCGATCTACCTAGG 58.842 60.000 7.41 7.41 0.00 3.02
3921 6728 0.791422 CGCTCCGTCGATCTACCTAG 59.209 60.000 0.00 0.00 0.00 3.02
3922 6729 1.226686 GCGCTCCGTCGATCTACCTA 61.227 60.000 0.00 0.00 0.00 3.08
3923 6730 2.544698 GCGCTCCGTCGATCTACCT 61.545 63.158 0.00 0.00 0.00 3.08
3924 6731 2.051166 GCGCTCCGTCGATCTACC 60.051 66.667 0.00 0.00 0.00 3.18
3925 6732 2.051166 GGCGCTCCGTCGATCTAC 60.051 66.667 7.64 0.00 0.00 2.59
3926 6733 1.822613 AAGGCGCTCCGTCGATCTA 60.823 57.895 7.64 0.00 36.23 1.98
3927 6734 3.141488 AAGGCGCTCCGTCGATCT 61.141 61.111 7.64 0.00 36.23 2.75
3928 6735 2.956964 CAAGGCGCTCCGTCGATC 60.957 66.667 7.64 0.00 36.23 3.69
3929 6736 4.514577 CCAAGGCGCTCCGTCGAT 62.515 66.667 7.64 0.00 36.23 3.59
3931 6738 4.514577 ATCCAAGGCGCTCCGTCG 62.515 66.667 7.64 0.00 36.23 5.12
3932 6739 0.461339 TAAATCCAAGGCGCTCCGTC 60.461 55.000 7.64 0.00 37.47 4.79
3933 6740 0.180406 ATAAATCCAAGGCGCTCCGT 59.820 50.000 7.64 0.00 37.47 4.69
3934 6741 1.264288 GAATAAATCCAAGGCGCTCCG 59.736 52.381 7.64 0.00 37.47 4.63
3935 6742 2.576615 AGAATAAATCCAAGGCGCTCC 58.423 47.619 7.64 0.00 0.00 4.70
3936 6743 4.574828 TGTTAGAATAAATCCAAGGCGCTC 59.425 41.667 7.64 0.00 0.00 5.03
3937 6744 4.523083 TGTTAGAATAAATCCAAGGCGCT 58.477 39.130 7.64 0.00 0.00 5.92
3938 6745 4.893424 TGTTAGAATAAATCCAAGGCGC 57.107 40.909 0.00 0.00 0.00 6.53
3939 6746 6.189677 TGTTGTTAGAATAAATCCAAGGCG 57.810 37.500 0.00 0.00 0.00 5.52
3940 6747 7.771183 TCATGTTGTTAGAATAAATCCAAGGC 58.229 34.615 0.00 0.00 0.00 4.35
3941 6748 9.793252 CTTCATGTTGTTAGAATAAATCCAAGG 57.207 33.333 0.00 0.00 0.00 3.61
3952 6759 9.554395 TGATTCTTGTACTTCATGTTGTTAGAA 57.446 29.630 0.00 4.53 0.00 2.10
3953 6760 9.725019 ATGATTCTTGTACTTCATGTTGTTAGA 57.275 29.630 0.00 0.00 0.00 2.10
4014 6821 3.631250 AGGCTTTCTGTGTTTTCCAGAA 58.369 40.909 0.00 0.00 44.83 3.02
4040 6848 3.181516 CGTGCAGATAGTTTCAGGCTTTC 60.182 47.826 0.00 0.00 0.00 2.62
4041 6849 2.744202 CGTGCAGATAGTTTCAGGCTTT 59.256 45.455 0.00 0.00 0.00 3.51
4042 6850 2.350522 CGTGCAGATAGTTTCAGGCTT 58.649 47.619 0.00 0.00 0.00 4.35
4043 6851 2.009042 GCGTGCAGATAGTTTCAGGCT 61.009 52.381 0.00 0.00 37.36 4.58
4044 6852 0.375106 GCGTGCAGATAGTTTCAGGC 59.625 55.000 0.00 0.00 34.05 4.85
4055 6863 0.744414 GCCAGATAAAGGCGTGCAGA 60.744 55.000 0.00 0.00 43.15 4.26
4137 7830 9.064706 GGGGAGAGCCTAGTTAAATAAAAATAC 57.935 37.037 0.00 0.00 0.00 1.89
4138 7831 9.010767 AGGGGAGAGCCTAGTTAAATAAAAATA 57.989 33.333 0.00 0.00 0.00 1.40
4192 8747 3.550437 ACAAGGATGAGTGGTATGCTC 57.450 47.619 0.00 0.00 0.00 4.26
4488 9053 2.165167 TCATTTTGAGAGCCTTGGCAG 58.835 47.619 14.54 0.00 0.00 4.85
4617 9217 8.908903 ACAAGAGTATGTATGTTTTTGTTTCCA 58.091 29.630 0.00 0.00 0.00 3.53
4689 9296 1.093972 TATGAGTTGTTGGCCGCATG 58.906 50.000 0.00 0.00 0.00 4.06
4692 9307 0.248621 GCATATGAGTTGTTGGCCGC 60.249 55.000 6.97 0.00 0.00 6.53
4696 9311 8.192774 ACAATCATAAAGCATATGAGTTGTTGG 58.807 33.333 6.97 10.46 37.37 3.77
4750 9366 8.734386 ACAAATATCTTCTTCACCTTTGATGAC 58.266 33.333 0.00 0.00 36.04 3.06
5061 9683 6.056090 TGCACTTCAACAATACAGGGTATA 57.944 37.500 0.00 0.00 0.00 1.47
5134 9761 6.179906 AGTACCCATCCTACAATGAATCAG 57.820 41.667 0.00 0.00 0.00 2.90
5139 9766 5.104527 CCTTGAAGTACCCATCCTACAATGA 60.105 44.000 0.00 0.00 0.00 2.57
5150 9777 3.521937 CCCTTATGACCTTGAAGTACCCA 59.478 47.826 0.00 0.00 0.00 4.51
5255 9882 3.482783 GCGCCGCTCAGACTTCAC 61.483 66.667 0.00 0.00 0.00 3.18
5309 9937 8.884124 TGAATCAAAGAGGGTCTTAATTTGAT 57.116 30.769 5.81 5.81 46.91 2.57
5528 10162 3.440522 GGTGCCTTAGGAAATCAAGTCAC 59.559 47.826 0.69 0.00 31.55 3.67
5599 10248 6.459435 CGAGACACATCATTCATCAGTCTAGT 60.459 42.308 0.00 0.00 35.24 2.57
5798 10455 4.523853 TCGCGCGTCATGTATAAATTTT 57.476 36.364 30.98 0.00 0.00 1.82
5799 10456 4.725556 ATCGCGCGTCATGTATAAATTT 57.274 36.364 30.98 0.00 0.00 1.82
5800 10457 5.060569 GTCTATCGCGCGTCATGTATAAATT 59.939 40.000 30.98 0.00 0.00 1.82
5801 10458 4.557690 GTCTATCGCGCGTCATGTATAAAT 59.442 41.667 30.98 13.95 0.00 1.40
5809 10467 1.227639 AGTAGTCTATCGCGCGTCAT 58.772 50.000 30.98 19.41 0.00 3.06
5833 10493 9.997172 AGGGAATCTTTAGAGGTCATTTTATTT 57.003 29.630 0.00 0.00 0.00 1.40
5855 10515 6.071221 TCGCTTACATAGAGTTGTTTTAGGGA 60.071 38.462 0.00 0.00 0.00 4.20
5864 10524 5.812642 AGAAACCATCGCTTACATAGAGTTG 59.187 40.000 0.00 0.00 0.00 3.16
6176 10861 3.536917 CCTCCTCCCGCGTATGCA 61.537 66.667 4.92 0.00 42.97 3.96


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.