Multiple sequence alignment - TraesCS4B01G057000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G057000 chr4B 100.000 3374 0 0 1 3374 46931904 46935277 0.000000e+00 6231.0
1 TraesCS4B01G057000 chr4B 98.351 485 8 0 1 485 46925029 46925513 0.000000e+00 852.0
2 TraesCS4B01G057000 chr4B 94.340 212 11 1 2325 2535 46923386 46923175 1.170000e-84 324.0
3 TraesCS4B01G057000 chr3B 97.463 2050 51 1 486 2535 489349692 489351740 0.000000e+00 3496.0
4 TraesCS4B01G057000 chr3B 94.600 1852 80 14 486 2323 651425381 651427226 0.000000e+00 2848.0
5 TraesCS4B01G057000 chr3B 98.351 485 8 0 1 485 780419082 780419566 0.000000e+00 852.0
6 TraesCS4B01G057000 chr3B 83.411 645 104 2 1682 2323 651501913 651502557 2.240000e-166 595.0
7 TraesCS4B01G057000 chr3B 94.340 212 11 1 2325 2535 489349338 489349127 1.170000e-84 324.0
8 TraesCS4B01G057000 chr3B 83.003 353 57 3 1086 1437 651501357 651501707 1.950000e-82 316.0
9 TraesCS4B01G057000 chr3B 88.889 225 22 3 2325 2547 331552304 331552527 1.190000e-69 274.0
10 TraesCS4B01G057000 chr2B 96.829 2050 54 1 486 2535 254628028 254625990 0.000000e+00 3415.0
11 TraesCS4B01G057000 chr2B 92.453 212 15 1 2325 2535 24026079 24026290 5.470000e-78 302.0
12 TraesCS4B01G057000 chr2B 92.965 199 13 1 2338 2535 239858677 239858479 4.260000e-74 289.0
13 TraesCS4B01G057000 chr2B 91.346 208 17 1 2325 2531 24017131 24016924 1.980000e-72 283.0
14 TraesCS4B01G057000 chr3D 94.318 1848 89 15 486 2326 488951949 488950111 0.000000e+00 2817.0
15 TraesCS4B01G057000 chr3D 84.360 633 99 0 1691 2323 488903676 488903044 3.700000e-174 621.0
16 TraesCS4B01G057000 chr3A 92.865 1864 82 26 486 2323 632039372 632041210 0.000000e+00 2658.0
17 TraesCS4B01G057000 chr3A 83.140 344 58 0 1094 1437 632288663 632289006 7.030000e-82 315.0
18 TraesCS4B01G057000 chr7B 88.018 1352 141 14 977 2326 40276959 40275627 0.000000e+00 1580.0
19 TraesCS4B01G057000 chr7B 97.942 486 7 1 1 483 377013384 377013869 0.000000e+00 839.0
20 TraesCS4B01G057000 chr7B 96.787 498 11 2 1 493 326214886 326214389 0.000000e+00 826.0
21 TraesCS4B01G057000 chr7D 86.432 1393 144 23 960 2326 89312344 89310971 0.000000e+00 1483.0
22 TraesCS4B01G057000 chr4D 90.643 855 58 14 2536 3371 32343650 32344501 0.000000e+00 1116.0
23 TraesCS4B01G057000 chr4A 90.364 851 55 17 2536 3374 570275378 570274543 0.000000e+00 1092.0
24 TraesCS4B01G057000 chr1B 97.951 488 7 1 1 485 356163939 356163452 0.000000e+00 843.0
25 TraesCS4B01G057000 chr1B 97.746 488 8 1 1 485 279730332 279730819 0.000000e+00 837.0
26 TraesCS4B01G057000 chr1B 97.746 488 8 1 1 485 532088797 532089284 0.000000e+00 837.0
27 TraesCS4B01G057000 chr1B 92.308 208 15 1 2338 2544 605557341 605557134 9.160000e-76 294.0
28 TraesCS4B01G057000 chr1B 90.654 214 15 4 2325 2535 659947746 659947957 2.560000e-71 279.0
29 TraesCS4B01G057000 chr1B 80.220 91 13 5 3237 3326 151094316 151094230 2.810000e-06 63.9
30 TraesCS4B01G057000 chrUn 97.541 488 9 1 1 485 353914658 353915145 0.000000e+00 832.0
31 TraesCS4B01G057000 chr5B 96.964 494 12 1 1 491 593112623 593113116 0.000000e+00 826.0
32 TraesCS4B01G057000 chr5B 84.146 82 5 4 3270 3343 6580913 6580994 4.670000e-09 73.1
33 TraesCS4B01G057000 chr5D 77.857 140 26 5 3230 3366 547455816 547455679 7.760000e-12 82.4
34 TraesCS4B01G057000 chr1A 80.645 93 12 6 3230 3319 104947319 104947230 2.170000e-07 67.6
35 TraesCS4B01G057000 chr1D 80.220 91 13 5 3237 3326 100457847 100457933 2.810000e-06 63.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G057000 chr4B 46931904 46935277 3373 False 6231.0 6231 100.000 1 3374 1 chr4B.!!$F2 3373
1 TraesCS4B01G057000 chr3B 489349692 489351740 2048 False 3496.0 3496 97.463 486 2535 1 chr3B.!!$F2 2049
2 TraesCS4B01G057000 chr3B 651425381 651427226 1845 False 2848.0 2848 94.600 486 2323 1 chr3B.!!$F3 1837
3 TraesCS4B01G057000 chr3B 651501357 651502557 1200 False 455.5 595 83.207 1086 2323 2 chr3B.!!$F5 1237
4 TraesCS4B01G057000 chr2B 254625990 254628028 2038 True 3415.0 3415 96.829 486 2535 1 chr2B.!!$R3 2049
5 TraesCS4B01G057000 chr3D 488950111 488951949 1838 True 2817.0 2817 94.318 486 2326 1 chr3D.!!$R2 1840
6 TraesCS4B01G057000 chr3D 488903044 488903676 632 True 621.0 621 84.360 1691 2323 1 chr3D.!!$R1 632
7 TraesCS4B01G057000 chr3A 632039372 632041210 1838 False 2658.0 2658 92.865 486 2323 1 chr3A.!!$F1 1837
8 TraesCS4B01G057000 chr7B 40275627 40276959 1332 True 1580.0 1580 88.018 977 2326 1 chr7B.!!$R1 1349
9 TraesCS4B01G057000 chr7D 89310971 89312344 1373 True 1483.0 1483 86.432 960 2326 1 chr7D.!!$R1 1366
10 TraesCS4B01G057000 chr4D 32343650 32344501 851 False 1116.0 1116 90.643 2536 3371 1 chr4D.!!$F1 835
11 TraesCS4B01G057000 chr4A 570274543 570275378 835 True 1092.0 1092 90.364 2536 3374 1 chr4A.!!$R1 838

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
45 46 0.033601 TGCCAACCCAACAGACACTT 60.034 50.000 0.00 0.0 0.00 3.16 F
300 301 0.036164 TGTCCATGGTCAGGAAACCG 59.964 55.000 12.58 0.0 42.62 4.44 F
301 302 0.036306 GTCCATGGTCAGGAAACCGT 59.964 55.000 12.58 0.0 42.62 4.83 F
310 311 1.001974 TCAGGAAACCGTGACCATCTG 59.998 52.381 0.00 0.0 0.00 2.90 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1050 1085 0.532573 CCGAGAGCAAGGTGAAGCTA 59.467 55.000 0.00 0.0 42.04 3.32 R
1718 1809 1.095600 CGACTGGGAGAAGATGACGA 58.904 55.000 0.00 0.0 0.00 4.20 R
2323 2417 1.680735 TGCGTTTTGCTGAATCAACCT 59.319 42.857 0.00 0.0 46.63 3.50 R
2409 2504 1.743394 GTTTTAGTCCCAGGCCAATCG 59.257 52.381 5.01 0.0 0.00 3.34 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 2.611518 GAGTGACAAATCCCAGTCTCG 58.388 52.381 0.00 0.00 35.81 4.04
21 22 2.231478 GAGTGACAAATCCCAGTCTCGA 59.769 50.000 0.00 0.00 35.81 4.04
22 23 2.834549 AGTGACAAATCCCAGTCTCGAT 59.165 45.455 0.00 0.00 35.81 3.59
23 24 3.261897 AGTGACAAATCCCAGTCTCGATT 59.738 43.478 0.00 0.00 35.81 3.34
24 25 3.619038 GTGACAAATCCCAGTCTCGATTC 59.381 47.826 0.00 0.00 35.81 2.52
25 26 2.860735 GACAAATCCCAGTCTCGATTCG 59.139 50.000 0.00 0.00 0.00 3.34
26 27 2.233922 ACAAATCCCAGTCTCGATTCGT 59.766 45.455 5.89 0.00 0.00 3.85
27 28 2.586258 AATCCCAGTCTCGATTCGTG 57.414 50.000 5.89 3.75 0.00 4.35
28 29 0.103208 ATCCCAGTCTCGATTCGTGC 59.897 55.000 5.89 0.85 0.00 5.34
29 30 1.519455 CCCAGTCTCGATTCGTGCC 60.519 63.158 5.89 0.00 0.00 5.01
30 31 1.215382 CCAGTCTCGATTCGTGCCA 59.785 57.895 5.89 0.00 0.00 4.92
31 32 0.389817 CCAGTCTCGATTCGTGCCAA 60.390 55.000 5.89 0.00 0.00 4.52
32 33 0.716108 CAGTCTCGATTCGTGCCAAC 59.284 55.000 5.89 0.00 0.00 3.77
33 34 0.389948 AGTCTCGATTCGTGCCAACC 60.390 55.000 5.89 0.00 0.00 3.77
34 35 1.079405 TCTCGATTCGTGCCAACCC 60.079 57.895 5.89 0.00 0.00 4.11
35 36 1.375396 CTCGATTCGTGCCAACCCA 60.375 57.895 5.89 0.00 0.00 4.51
36 37 0.953471 CTCGATTCGTGCCAACCCAA 60.953 55.000 5.89 0.00 0.00 4.12
37 38 1.209127 CGATTCGTGCCAACCCAAC 59.791 57.895 0.00 0.00 0.00 3.77
38 39 1.511318 CGATTCGTGCCAACCCAACA 61.511 55.000 0.00 0.00 0.00 3.33
39 40 0.240945 GATTCGTGCCAACCCAACAG 59.759 55.000 0.00 0.00 0.00 3.16
40 41 0.179004 ATTCGTGCCAACCCAACAGA 60.179 50.000 0.00 0.00 0.00 3.41
41 42 1.098712 TTCGTGCCAACCCAACAGAC 61.099 55.000 0.00 0.00 0.00 3.51
42 43 1.821759 CGTGCCAACCCAACAGACA 60.822 57.895 0.00 0.00 0.00 3.41
43 44 1.733526 GTGCCAACCCAACAGACAC 59.266 57.895 0.00 0.00 0.00 3.67
44 45 0.751643 GTGCCAACCCAACAGACACT 60.752 55.000 0.00 0.00 0.00 3.55
45 46 0.033601 TGCCAACCCAACAGACACTT 60.034 50.000 0.00 0.00 0.00 3.16
46 47 1.111277 GCCAACCCAACAGACACTTT 58.889 50.000 0.00 0.00 0.00 2.66
47 48 1.067060 GCCAACCCAACAGACACTTTC 59.933 52.381 0.00 0.00 0.00 2.62
48 49 1.333619 CCAACCCAACAGACACTTTCG 59.666 52.381 0.00 0.00 0.00 3.46
49 50 1.333619 CAACCCAACAGACACTTTCGG 59.666 52.381 0.00 0.00 0.00 4.30
50 51 0.834612 ACCCAACAGACACTTTCGGA 59.165 50.000 0.00 0.00 0.00 4.55
51 52 1.202651 ACCCAACAGACACTTTCGGAG 60.203 52.381 0.00 0.00 0.00 4.63
52 53 1.070134 CCCAACAGACACTTTCGGAGA 59.930 52.381 0.00 0.00 0.00 3.71
53 54 2.289694 CCCAACAGACACTTTCGGAGAT 60.290 50.000 0.00 0.00 35.04 2.75
54 55 3.056107 CCCAACAGACACTTTCGGAGATA 60.056 47.826 0.00 0.00 35.04 1.98
55 56 3.927142 CCAACAGACACTTTCGGAGATAC 59.073 47.826 0.00 0.00 35.04 2.24
56 57 4.322049 CCAACAGACACTTTCGGAGATACT 60.322 45.833 0.00 0.00 35.04 2.12
57 58 5.230942 CAACAGACACTTTCGGAGATACTT 58.769 41.667 0.00 0.00 35.04 2.24
58 59 4.810790 ACAGACACTTTCGGAGATACTTG 58.189 43.478 0.00 0.00 35.04 3.16
59 60 4.281182 ACAGACACTTTCGGAGATACTTGT 59.719 41.667 0.00 0.00 35.04 3.16
60 61 5.475909 ACAGACACTTTCGGAGATACTTGTA 59.524 40.000 0.00 0.00 35.04 2.41
61 62 6.030849 CAGACACTTTCGGAGATACTTGTAG 58.969 44.000 0.00 0.00 35.04 2.74
62 63 5.711036 AGACACTTTCGGAGATACTTGTAGT 59.289 40.000 0.00 0.00 35.04 2.73
63 64 5.710984 ACACTTTCGGAGATACTTGTAGTG 58.289 41.667 0.00 0.00 35.04 2.74
64 65 4.563184 CACTTTCGGAGATACTTGTAGTGC 59.437 45.833 0.00 0.00 35.04 4.40
65 66 4.219944 ACTTTCGGAGATACTTGTAGTGCA 59.780 41.667 0.00 0.00 35.04 4.57
66 67 3.777465 TCGGAGATACTTGTAGTGCAC 57.223 47.619 9.40 9.40 0.00 4.57
67 68 2.426024 TCGGAGATACTTGTAGTGCACC 59.574 50.000 14.63 0.00 0.00 5.01
68 69 2.427453 CGGAGATACTTGTAGTGCACCT 59.573 50.000 14.63 3.48 0.00 4.00
69 70 3.119101 CGGAGATACTTGTAGTGCACCTT 60.119 47.826 14.63 0.00 0.00 3.50
70 71 4.620803 CGGAGATACTTGTAGTGCACCTTT 60.621 45.833 14.63 0.00 0.00 3.11
71 72 5.393787 CGGAGATACTTGTAGTGCACCTTTA 60.394 44.000 14.63 0.00 0.00 1.85
72 73 6.583562 GGAGATACTTGTAGTGCACCTTTAT 58.416 40.000 14.63 2.08 0.00 1.40
73 74 7.469594 CGGAGATACTTGTAGTGCACCTTTATA 60.470 40.741 14.63 0.00 0.00 0.98
74 75 7.868415 GGAGATACTTGTAGTGCACCTTTATAG 59.132 40.741 14.63 6.49 0.00 1.31
75 76 7.210873 AGATACTTGTAGTGCACCTTTATAGC 58.789 38.462 14.63 2.58 0.00 2.97
76 77 4.514401 ACTTGTAGTGCACCTTTATAGCC 58.486 43.478 14.63 0.00 0.00 3.93
77 78 4.019681 ACTTGTAGTGCACCTTTATAGCCA 60.020 41.667 14.63 0.00 0.00 4.75
78 79 3.869065 TGTAGTGCACCTTTATAGCCAC 58.131 45.455 14.63 0.00 0.00 5.01
79 80 2.420058 AGTGCACCTTTATAGCCACC 57.580 50.000 14.63 0.00 0.00 4.61
80 81 1.064685 AGTGCACCTTTATAGCCACCC 60.065 52.381 14.63 0.00 0.00 4.61
81 82 0.995803 TGCACCTTTATAGCCACCCA 59.004 50.000 0.00 0.00 0.00 4.51
82 83 1.064758 TGCACCTTTATAGCCACCCAG 60.065 52.381 0.00 0.00 0.00 4.45
83 84 1.064685 GCACCTTTATAGCCACCCAGT 60.065 52.381 0.00 0.00 0.00 4.00
84 85 2.620627 GCACCTTTATAGCCACCCAGTT 60.621 50.000 0.00 0.00 0.00 3.16
85 86 3.371166 GCACCTTTATAGCCACCCAGTTA 60.371 47.826 0.00 0.00 0.00 2.24
86 87 4.196971 CACCTTTATAGCCACCCAGTTAC 58.803 47.826 0.00 0.00 0.00 2.50
87 88 3.118519 ACCTTTATAGCCACCCAGTTACG 60.119 47.826 0.00 0.00 0.00 3.18
88 89 3.118519 CCTTTATAGCCACCCAGTTACGT 60.119 47.826 0.00 0.00 0.00 3.57
89 90 4.510571 CTTTATAGCCACCCAGTTACGTT 58.489 43.478 0.00 0.00 0.00 3.99
90 91 2.396590 ATAGCCACCCAGTTACGTTG 57.603 50.000 0.00 0.00 0.00 4.10
91 92 1.050204 TAGCCACCCAGTTACGTTGT 58.950 50.000 0.00 0.00 0.00 3.32
92 93 0.534203 AGCCACCCAGTTACGTTGTG 60.534 55.000 0.00 0.00 0.00 3.33
93 94 0.533308 GCCACCCAGTTACGTTGTGA 60.533 55.000 0.00 0.00 0.00 3.58
94 95 1.223187 CCACCCAGTTACGTTGTGAC 58.777 55.000 0.00 0.00 0.00 3.67
105 106 2.356386 CGTTGTGACGTTTGGTACAC 57.644 50.000 0.00 0.00 44.08 2.90
106 107 1.004715 CGTTGTGACGTTTGGTACACC 60.005 52.381 0.00 0.00 44.08 4.16
107 108 1.331447 GTTGTGACGTTTGGTACACCC 59.669 52.381 0.00 0.00 39.29 4.61
108 109 0.540454 TGTGACGTTTGGTACACCCA 59.460 50.000 0.00 0.00 43.27 4.51
117 118 1.917872 TGGTACACCCAAAGCATTCC 58.082 50.000 0.00 0.00 41.50 3.01
118 119 1.427368 TGGTACACCCAAAGCATTCCT 59.573 47.619 0.00 0.00 41.50 3.36
119 120 2.645297 TGGTACACCCAAAGCATTCCTA 59.355 45.455 0.00 0.00 41.50 2.94
120 121 3.014623 GGTACACCCAAAGCATTCCTAC 58.985 50.000 0.00 0.00 0.00 3.18
121 122 1.821216 ACACCCAAAGCATTCCTACG 58.179 50.000 0.00 0.00 0.00 3.51
122 123 1.094785 CACCCAAAGCATTCCTACGG 58.905 55.000 0.00 0.00 0.00 4.02
123 124 0.696501 ACCCAAAGCATTCCTACGGT 59.303 50.000 0.00 0.00 0.00 4.83
124 125 1.910671 ACCCAAAGCATTCCTACGGTA 59.089 47.619 0.00 0.00 0.00 4.02
125 126 2.508300 ACCCAAAGCATTCCTACGGTAT 59.492 45.455 0.00 0.00 0.00 2.73
126 127 3.139077 CCCAAAGCATTCCTACGGTATC 58.861 50.000 0.00 0.00 0.00 2.24
127 128 3.139077 CCAAAGCATTCCTACGGTATCC 58.861 50.000 0.00 0.00 0.00 2.59
137 138 4.902308 CGGTATCCGTGAGTTGCA 57.098 55.556 0.00 0.00 42.73 4.08
138 139 2.369870 CGGTATCCGTGAGTTGCAC 58.630 57.895 0.00 0.00 42.73 4.57
148 149 3.482722 GTGAGTTGCACAATCTCATGG 57.517 47.619 14.40 0.00 46.91 3.66
149 150 2.816087 GTGAGTTGCACAATCTCATGGT 59.184 45.455 14.40 0.00 46.91 3.55
150 151 3.076621 TGAGTTGCACAATCTCATGGTC 58.923 45.455 9.91 0.00 34.00 4.02
151 152 3.244665 TGAGTTGCACAATCTCATGGTCT 60.245 43.478 9.91 0.00 34.00 3.85
152 153 4.020307 TGAGTTGCACAATCTCATGGTCTA 60.020 41.667 9.91 0.00 34.00 2.59
153 154 4.910195 AGTTGCACAATCTCATGGTCTAA 58.090 39.130 0.00 0.00 0.00 2.10
154 155 4.940046 AGTTGCACAATCTCATGGTCTAAG 59.060 41.667 0.00 0.00 0.00 2.18
155 156 3.877559 TGCACAATCTCATGGTCTAAGG 58.122 45.455 0.00 0.00 0.00 2.69
156 157 3.519107 TGCACAATCTCATGGTCTAAGGA 59.481 43.478 0.00 0.00 0.00 3.36
157 158 4.019411 TGCACAATCTCATGGTCTAAGGAA 60.019 41.667 0.00 0.00 0.00 3.36
158 159 4.943705 GCACAATCTCATGGTCTAAGGAAA 59.056 41.667 0.00 0.00 0.00 3.13
159 160 5.591877 GCACAATCTCATGGTCTAAGGAAAT 59.408 40.000 0.00 0.00 0.00 2.17
160 161 6.459298 GCACAATCTCATGGTCTAAGGAAATG 60.459 42.308 0.00 0.00 0.00 2.32
161 162 6.825213 CACAATCTCATGGTCTAAGGAAATGA 59.175 38.462 0.00 0.00 0.00 2.57
162 163 7.501559 CACAATCTCATGGTCTAAGGAAATGAT 59.498 37.037 0.00 0.00 31.04 2.45
163 164 8.717717 ACAATCTCATGGTCTAAGGAAATGATA 58.282 33.333 0.00 0.00 31.04 2.15
164 165 8.997323 CAATCTCATGGTCTAAGGAAATGATAC 58.003 37.037 0.00 0.00 31.04 2.24
165 166 7.921041 TCTCATGGTCTAAGGAAATGATACT 57.079 36.000 0.00 0.00 31.04 2.12
166 167 8.324191 TCTCATGGTCTAAGGAAATGATACTT 57.676 34.615 0.00 0.00 31.04 2.24
167 168 8.206867 TCTCATGGTCTAAGGAAATGATACTTG 58.793 37.037 0.00 0.00 31.04 3.16
168 169 8.089625 TCATGGTCTAAGGAAATGATACTTGA 57.910 34.615 0.00 0.00 0.00 3.02
169 170 7.987458 TCATGGTCTAAGGAAATGATACTTGAC 59.013 37.037 0.00 0.00 0.00 3.18
170 171 7.252612 TGGTCTAAGGAAATGATACTTGACA 57.747 36.000 0.00 0.00 30.76 3.58
171 172 7.861629 TGGTCTAAGGAAATGATACTTGACAT 58.138 34.615 0.00 0.00 30.76 3.06
172 173 8.328758 TGGTCTAAGGAAATGATACTTGACATT 58.671 33.333 0.00 0.00 38.18 2.71
173 174 9.832445 GGTCTAAGGAAATGATACTTGACATTA 57.168 33.333 0.00 0.00 35.99 1.90
180 181 9.508567 GGAAATGATACTTGACATTAGAAAAGC 57.491 33.333 0.00 0.00 35.99 3.51
186 187 9.709600 GATACTTGACATTAGAAAAGCTTTAGC 57.290 33.333 13.10 7.97 42.49 3.09
187 188 7.510549 ACTTGACATTAGAAAAGCTTTAGCA 57.489 32.000 13.10 0.00 45.16 3.49
188 189 8.115490 ACTTGACATTAGAAAAGCTTTAGCAT 57.885 30.769 13.10 0.00 45.16 3.79
189 190 9.231297 ACTTGACATTAGAAAAGCTTTAGCATA 57.769 29.630 13.10 0.54 45.16 3.14
190 191 9.495754 CTTGACATTAGAAAAGCTTTAGCATAC 57.504 33.333 13.10 1.75 45.16 2.39
191 192 7.684670 TGACATTAGAAAAGCTTTAGCATACG 58.315 34.615 13.10 1.72 45.16 3.06
192 193 7.547722 TGACATTAGAAAAGCTTTAGCATACGA 59.452 33.333 13.10 0.00 45.16 3.43
193 194 8.263940 ACATTAGAAAAGCTTTAGCATACGAA 57.736 30.769 13.10 3.87 45.16 3.85
194 195 8.175716 ACATTAGAAAAGCTTTAGCATACGAAC 58.824 33.333 13.10 0.00 45.16 3.95
195 196 7.900782 TTAGAAAAGCTTTAGCATACGAACT 57.099 32.000 13.10 0.00 45.16 3.01
196 197 8.991243 TTAGAAAAGCTTTAGCATACGAACTA 57.009 30.769 13.10 1.92 45.16 2.24
197 198 7.292129 AGAAAAGCTTTAGCATACGAACTAC 57.708 36.000 13.10 0.00 45.16 2.73
198 199 5.697848 AAAGCTTTAGCATACGAACTACG 57.302 39.130 10.72 0.00 45.16 3.51
199 200 4.627611 AGCTTTAGCATACGAACTACGA 57.372 40.909 4.33 0.00 43.82 3.43
200 201 5.184340 AGCTTTAGCATACGAACTACGAT 57.816 39.130 4.33 0.00 43.82 3.73
201 202 5.213675 AGCTTTAGCATACGAACTACGATC 58.786 41.667 4.33 0.00 43.82 3.69
202 203 5.008811 AGCTTTAGCATACGAACTACGATCT 59.991 40.000 4.33 0.00 43.82 2.75
203 204 5.686397 GCTTTAGCATACGAACTACGATCTT 59.314 40.000 0.00 0.00 42.05 2.40
204 205 6.198591 GCTTTAGCATACGAACTACGATCTTT 59.801 38.462 0.00 0.00 42.05 2.52
205 206 7.445900 TTTAGCATACGAACTACGATCTTTG 57.554 36.000 0.00 0.00 45.77 2.77
206 207 4.995124 AGCATACGAACTACGATCTTTGT 58.005 39.130 0.00 0.00 45.77 2.83
207 208 4.798907 AGCATACGAACTACGATCTTTGTG 59.201 41.667 0.00 0.00 45.77 3.33
208 209 4.548346 GCATACGAACTACGATCTTTGTGC 60.548 45.833 0.00 0.00 45.77 4.57
209 210 3.299340 ACGAACTACGATCTTTGTGCT 57.701 42.857 0.00 0.00 45.77 4.40
210 211 4.430137 ACGAACTACGATCTTTGTGCTA 57.570 40.909 0.00 0.00 45.77 3.49
211 212 4.413087 ACGAACTACGATCTTTGTGCTAG 58.587 43.478 0.00 0.00 45.77 3.42
212 213 3.791887 CGAACTACGATCTTTGTGCTAGG 59.208 47.826 0.00 0.00 45.77 3.02
213 214 3.166489 ACTACGATCTTTGTGCTAGGC 57.834 47.619 0.00 0.00 0.00 3.93
214 215 2.761208 ACTACGATCTTTGTGCTAGGCT 59.239 45.455 0.00 0.00 0.00 4.58
215 216 2.770164 ACGATCTTTGTGCTAGGCTT 57.230 45.000 0.00 0.00 0.00 4.35
216 217 3.887621 ACGATCTTTGTGCTAGGCTTA 57.112 42.857 0.00 0.00 0.00 3.09
217 218 3.786635 ACGATCTTTGTGCTAGGCTTAG 58.213 45.455 0.00 0.00 0.00 2.18
218 219 3.126831 CGATCTTTGTGCTAGGCTTAGG 58.873 50.000 4.88 0.00 0.00 2.69
219 220 3.181475 CGATCTTTGTGCTAGGCTTAGGA 60.181 47.826 4.88 0.00 0.00 2.94
220 221 4.502259 CGATCTTTGTGCTAGGCTTAGGAT 60.502 45.833 4.88 0.00 29.47 3.24
221 222 4.844349 TCTTTGTGCTAGGCTTAGGATT 57.156 40.909 4.88 0.00 29.47 3.01
222 223 4.517285 TCTTTGTGCTAGGCTTAGGATTG 58.483 43.478 4.88 0.00 29.47 2.67
223 224 3.281727 TTGTGCTAGGCTTAGGATTGG 57.718 47.619 4.88 0.00 29.47 3.16
224 225 1.490490 TGTGCTAGGCTTAGGATTGGG 59.510 52.381 4.88 0.00 29.47 4.12
225 226 1.490910 GTGCTAGGCTTAGGATTGGGT 59.509 52.381 4.88 0.00 29.47 4.51
226 227 1.768870 TGCTAGGCTTAGGATTGGGTC 59.231 52.381 4.88 0.00 0.00 4.46
227 228 2.050918 GCTAGGCTTAGGATTGGGTCT 58.949 52.381 4.88 0.00 0.00 3.85
228 229 2.439880 GCTAGGCTTAGGATTGGGTCTT 59.560 50.000 4.88 0.00 0.00 3.01
229 230 3.745797 GCTAGGCTTAGGATTGGGTCTTG 60.746 52.174 4.88 0.00 0.00 3.02
230 231 2.279173 AGGCTTAGGATTGGGTCTTGT 58.721 47.619 0.00 0.00 0.00 3.16
231 232 2.239907 AGGCTTAGGATTGGGTCTTGTC 59.760 50.000 0.00 0.00 0.00 3.18
232 233 2.644676 GCTTAGGATTGGGTCTTGTCC 58.355 52.381 0.00 0.00 0.00 4.02
233 234 2.026262 GCTTAGGATTGGGTCTTGTCCA 60.026 50.000 0.00 0.00 33.12 4.02
234 235 3.372025 GCTTAGGATTGGGTCTTGTCCAT 60.372 47.826 0.00 0.00 33.82 3.41
235 236 4.455606 CTTAGGATTGGGTCTTGTCCATC 58.544 47.826 0.00 0.00 33.82 3.51
236 237 2.278245 AGGATTGGGTCTTGTCCATCA 58.722 47.619 0.00 0.00 33.82 3.07
237 238 2.025887 AGGATTGGGTCTTGTCCATCAC 60.026 50.000 0.00 0.00 33.82 3.06
238 239 2.290896 GGATTGGGTCTTGTCCATCACA 60.291 50.000 0.00 0.00 33.82 3.58
239 240 3.624777 GATTGGGTCTTGTCCATCACAT 58.375 45.455 0.00 0.00 33.90 3.21
240 241 2.787473 TGGGTCTTGTCCATCACATC 57.213 50.000 0.00 0.00 33.90 3.06
241 242 1.984424 TGGGTCTTGTCCATCACATCA 59.016 47.619 0.00 0.00 33.90 3.07
242 243 2.577563 TGGGTCTTGTCCATCACATCAT 59.422 45.455 0.00 0.00 33.90 2.45
243 244 3.010472 TGGGTCTTGTCCATCACATCATT 59.990 43.478 0.00 0.00 33.90 2.57
244 245 3.629398 GGGTCTTGTCCATCACATCATTC 59.371 47.826 0.00 0.00 33.90 2.67
245 246 4.521146 GGTCTTGTCCATCACATCATTCT 58.479 43.478 0.00 0.00 33.90 2.40
246 247 4.946157 GGTCTTGTCCATCACATCATTCTT 59.054 41.667 0.00 0.00 33.90 2.52
247 248 5.065731 GGTCTTGTCCATCACATCATTCTTC 59.934 44.000 0.00 0.00 33.90 2.87
248 249 5.879223 GTCTTGTCCATCACATCATTCTTCT 59.121 40.000 0.00 0.00 33.90 2.85
249 250 7.044181 GTCTTGTCCATCACATCATTCTTCTA 58.956 38.462 0.00 0.00 33.90 2.10
250 251 7.550551 GTCTTGTCCATCACATCATTCTTCTAA 59.449 37.037 0.00 0.00 33.90 2.10
251 252 8.270030 TCTTGTCCATCACATCATTCTTCTAAT 58.730 33.333 0.00 0.00 33.90 1.73
252 253 7.797038 TGTCCATCACATCATTCTTCTAATG 57.203 36.000 0.00 0.00 0.00 1.90
253 254 7.567458 TGTCCATCACATCATTCTTCTAATGA 58.433 34.615 3.13 3.13 40.50 2.57
254 255 8.215736 TGTCCATCACATCATTCTTCTAATGAT 58.784 33.333 7.28 7.28 45.40 2.45
263 264 6.226052 TCATTCTTCTAATGATGTGATCCCG 58.774 40.000 0.00 0.00 32.21 5.14
264 265 5.614324 TTCTTCTAATGATGTGATCCCGT 57.386 39.130 0.00 0.00 0.00 5.28
265 266 5.614324 TCTTCTAATGATGTGATCCCGTT 57.386 39.130 0.00 0.00 0.00 4.44
266 267 6.724893 TCTTCTAATGATGTGATCCCGTTA 57.275 37.500 0.00 0.00 0.00 3.18
267 268 7.303182 TCTTCTAATGATGTGATCCCGTTAT 57.697 36.000 0.00 0.00 0.00 1.89
268 269 7.378966 TCTTCTAATGATGTGATCCCGTTATC 58.621 38.462 0.00 0.00 0.00 1.75
269 270 6.664428 TCTAATGATGTGATCCCGTTATCA 57.336 37.500 0.00 0.00 33.48 2.15
270 271 7.061566 TCTAATGATGTGATCCCGTTATCAA 57.938 36.000 0.00 0.00 37.61 2.57
271 272 6.929049 TCTAATGATGTGATCCCGTTATCAAC 59.071 38.462 0.00 0.00 37.61 3.18
293 294 3.008835 ACATCCAATGTCCATGGTCAG 57.991 47.619 16.79 4.75 39.92 3.51
294 295 2.304092 CATCCAATGTCCATGGTCAGG 58.696 52.381 16.79 13.14 39.09 3.86
295 296 1.667595 TCCAATGTCCATGGTCAGGA 58.332 50.000 16.79 15.06 39.09 3.86
296 297 1.991813 TCCAATGTCCATGGTCAGGAA 59.008 47.619 16.79 0.75 39.09 3.36
297 298 2.378208 TCCAATGTCCATGGTCAGGAAA 59.622 45.455 16.79 1.08 39.09 3.13
298 299 2.493278 CCAATGTCCATGGTCAGGAAAC 59.507 50.000 16.79 4.30 36.80 2.78
299 300 2.493278 CAATGTCCATGGTCAGGAAACC 59.507 50.000 16.79 0.00 36.80 3.27
300 301 0.036164 TGTCCATGGTCAGGAAACCG 59.964 55.000 12.58 0.00 42.62 4.44
301 302 0.036306 GTCCATGGTCAGGAAACCGT 59.964 55.000 12.58 0.00 42.62 4.83
304 305 3.625745 ATGGTCAGGAAACCGTGAC 57.374 52.632 9.08 9.08 44.35 3.67
307 308 3.625745 GTCAGGAAACCGTGACCAT 57.374 52.632 6.92 0.00 41.21 3.55
308 309 1.439679 GTCAGGAAACCGTGACCATC 58.560 55.000 6.92 0.00 41.21 3.51
309 310 1.002087 GTCAGGAAACCGTGACCATCT 59.998 52.381 6.92 0.00 41.21 2.90
310 311 1.001974 TCAGGAAACCGTGACCATCTG 59.998 52.381 0.00 0.00 0.00 2.90
311 312 1.056660 AGGAAACCGTGACCATCTGT 58.943 50.000 0.00 0.00 0.00 3.41
312 313 1.420138 AGGAAACCGTGACCATCTGTT 59.580 47.619 0.00 0.00 0.00 3.16
313 314 1.535462 GGAAACCGTGACCATCTGTTG 59.465 52.381 0.00 0.00 0.00 3.33
314 315 2.489971 GAAACCGTGACCATCTGTTGA 58.510 47.619 0.00 0.00 0.00 3.18
315 316 2.859165 AACCGTGACCATCTGTTGAT 57.141 45.000 0.00 0.00 0.00 2.57
316 317 2.386661 ACCGTGACCATCTGTTGATC 57.613 50.000 0.00 0.00 0.00 2.92
317 318 1.623311 ACCGTGACCATCTGTTGATCA 59.377 47.619 0.00 0.00 0.00 2.92
318 319 2.038426 ACCGTGACCATCTGTTGATCAA 59.962 45.455 3.38 3.38 0.00 2.57
319 320 2.416547 CCGTGACCATCTGTTGATCAAC 59.583 50.000 28.10 28.10 41.50 3.18
320 321 2.092681 CGTGACCATCTGTTGATCAACG 59.907 50.000 28.55 23.04 43.94 4.10
321 322 3.325870 GTGACCATCTGTTGATCAACGA 58.674 45.455 28.55 26.46 43.94 3.85
322 323 3.369147 GTGACCATCTGTTGATCAACGAG 59.631 47.826 28.55 24.84 43.94 4.18
323 324 2.349886 GACCATCTGTTGATCAACGAGC 59.650 50.000 28.55 16.38 43.94 5.03
324 325 2.027745 ACCATCTGTTGATCAACGAGCT 60.028 45.455 28.55 17.34 43.94 4.09
325 326 3.195610 ACCATCTGTTGATCAACGAGCTA 59.804 43.478 28.55 13.42 43.94 3.32
326 327 3.801050 CCATCTGTTGATCAACGAGCTAG 59.199 47.826 28.55 20.93 43.94 3.42
327 328 4.428209 CATCTGTTGATCAACGAGCTAGT 58.572 43.478 28.55 13.33 43.94 2.57
328 329 4.098055 TCTGTTGATCAACGAGCTAGTC 57.902 45.455 28.55 6.98 43.94 2.59
329 330 3.506067 TCTGTTGATCAACGAGCTAGTCA 59.494 43.478 28.55 10.88 43.94 3.41
330 331 4.022329 TCTGTTGATCAACGAGCTAGTCAA 60.022 41.667 28.55 10.18 43.94 3.18
331 332 4.820897 TGTTGATCAACGAGCTAGTCAAT 58.179 39.130 28.55 0.00 43.94 2.57
332 333 5.237815 TGTTGATCAACGAGCTAGTCAATT 58.762 37.500 28.55 0.00 43.94 2.32
333 334 6.394809 TGTTGATCAACGAGCTAGTCAATTA 58.605 36.000 28.55 7.59 43.94 1.40
334 335 6.531594 TGTTGATCAACGAGCTAGTCAATTAG 59.468 38.462 28.55 0.00 43.94 1.73
335 336 6.451064 TGATCAACGAGCTAGTCAATTAGA 57.549 37.500 0.00 0.00 0.00 2.10
336 337 6.499172 TGATCAACGAGCTAGTCAATTAGAG 58.501 40.000 0.00 0.00 0.00 2.43
337 338 5.250235 TCAACGAGCTAGTCAATTAGAGG 57.750 43.478 0.00 0.00 0.00 3.69
338 339 3.719173 ACGAGCTAGTCAATTAGAGGC 57.281 47.619 0.00 0.00 0.00 4.70
339 340 3.292460 ACGAGCTAGTCAATTAGAGGCT 58.708 45.455 0.00 0.00 32.76 4.58
340 341 3.702045 ACGAGCTAGTCAATTAGAGGCTT 59.298 43.478 0.00 0.00 31.07 4.35
341 342 4.888239 ACGAGCTAGTCAATTAGAGGCTTA 59.112 41.667 0.00 0.00 31.07 3.09
342 343 5.216648 CGAGCTAGTCAATTAGAGGCTTAC 58.783 45.833 0.00 0.00 31.07 2.34
343 344 5.009210 CGAGCTAGTCAATTAGAGGCTTACT 59.991 44.000 0.00 0.00 31.07 2.24
344 345 6.205076 CGAGCTAGTCAATTAGAGGCTTACTA 59.795 42.308 0.00 0.00 31.07 1.82
345 346 7.519032 AGCTAGTCAATTAGAGGCTTACTAG 57.481 40.000 0.00 0.00 38.50 2.57
346 347 6.492087 AGCTAGTCAATTAGAGGCTTACTAGG 59.508 42.308 0.00 0.00 36.85 3.02
347 348 6.294843 GCTAGTCAATTAGAGGCTTACTAGGG 60.295 46.154 0.00 0.00 36.85 3.53
348 349 5.778542 AGTCAATTAGAGGCTTACTAGGGA 58.221 41.667 0.00 0.00 0.00 4.20
349 350 5.599242 AGTCAATTAGAGGCTTACTAGGGAC 59.401 44.000 0.00 0.00 0.00 4.46
350 351 5.363005 GTCAATTAGAGGCTTACTAGGGACA 59.637 44.000 0.00 0.00 0.00 4.02
351 352 6.042208 GTCAATTAGAGGCTTACTAGGGACAT 59.958 42.308 0.00 0.00 0.00 3.06
352 353 6.042093 TCAATTAGAGGCTTACTAGGGACATG 59.958 42.308 0.00 0.00 0.00 3.21
353 354 2.683768 AGAGGCTTACTAGGGACATGG 58.316 52.381 0.00 0.00 0.00 3.66
354 355 2.022918 AGAGGCTTACTAGGGACATGGT 60.023 50.000 0.00 0.00 0.00 3.55
355 356 2.103263 GAGGCTTACTAGGGACATGGTG 59.897 54.545 0.00 0.00 0.00 4.17
356 357 1.838077 GGCTTACTAGGGACATGGTGT 59.162 52.381 0.00 0.00 0.00 4.16
357 358 2.238898 GGCTTACTAGGGACATGGTGTT 59.761 50.000 0.00 0.00 0.00 3.32
358 359 3.270877 GCTTACTAGGGACATGGTGTTG 58.729 50.000 0.00 0.00 0.00 3.33
359 360 3.307480 GCTTACTAGGGACATGGTGTTGT 60.307 47.826 0.00 0.00 0.00 3.32
360 361 4.504858 CTTACTAGGGACATGGTGTTGTC 58.495 47.826 0.00 0.00 44.27 3.18
361 362 2.621070 ACTAGGGACATGGTGTTGTCT 58.379 47.619 0.00 0.00 44.39 3.41
362 363 3.786553 ACTAGGGACATGGTGTTGTCTA 58.213 45.455 0.00 0.00 44.39 2.59
363 364 4.362677 ACTAGGGACATGGTGTTGTCTAT 58.637 43.478 0.00 0.00 44.39 1.98
364 365 3.634397 AGGGACATGGTGTTGTCTATG 57.366 47.619 0.00 0.00 44.39 2.23
365 366 2.912956 AGGGACATGGTGTTGTCTATGT 59.087 45.455 0.00 0.00 44.39 2.29
366 367 4.101114 AGGGACATGGTGTTGTCTATGTA 58.899 43.478 0.00 0.00 44.39 2.29
367 368 4.081087 AGGGACATGGTGTTGTCTATGTAC 60.081 45.833 0.00 0.00 44.39 2.90
368 369 4.189231 GGACATGGTGTTGTCTATGTACC 58.811 47.826 0.00 0.00 44.39 3.34
369 370 4.189231 GACATGGTGTTGTCTATGTACCC 58.811 47.826 0.00 0.00 42.22 3.69
370 371 3.585289 ACATGGTGTTGTCTATGTACCCA 59.415 43.478 0.00 0.00 32.41 4.51
371 372 3.688694 TGGTGTTGTCTATGTACCCAC 57.311 47.619 0.00 0.00 0.00 4.61
372 373 2.973406 TGGTGTTGTCTATGTACCCACA 59.027 45.455 0.00 0.00 39.52 4.17
373 374 3.244284 TGGTGTTGTCTATGTACCCACAC 60.244 47.826 0.00 0.00 37.54 3.82
374 375 3.244284 GGTGTTGTCTATGTACCCACACA 60.244 47.826 0.00 0.00 37.54 3.72
375 376 4.564821 GGTGTTGTCTATGTACCCACACAT 60.565 45.833 0.00 0.00 41.88 3.21
376 377 4.391830 GTGTTGTCTATGTACCCACACATG 59.608 45.833 0.00 0.00 39.46 3.21
377 378 4.041075 TGTTGTCTATGTACCCACACATGT 59.959 41.667 0.00 0.00 39.46 3.21
378 379 5.246429 TGTTGTCTATGTACCCACACATGTA 59.754 40.000 0.00 0.00 39.46 2.29
379 380 6.070481 TGTTGTCTATGTACCCACACATGTAT 60.070 38.462 0.00 0.00 39.46 2.29
380 381 6.156748 TGTCTATGTACCCACACATGTATC 57.843 41.667 0.00 0.00 39.46 2.24
381 382 5.897250 TGTCTATGTACCCACACATGTATCT 59.103 40.000 0.00 0.00 39.46 1.98
382 383 6.183360 TGTCTATGTACCCACACATGTATCTG 60.183 42.308 0.00 0.00 39.46 2.90
383 384 6.040504 GTCTATGTACCCACACATGTATCTGA 59.959 42.308 0.00 0.00 39.46 3.27
384 385 4.736126 TGTACCCACACATGTATCTGAG 57.264 45.455 0.00 0.00 0.00 3.35
385 386 4.093743 TGTACCCACACATGTATCTGAGT 58.906 43.478 0.00 0.00 0.00 3.41
386 387 4.530553 TGTACCCACACATGTATCTGAGTT 59.469 41.667 0.00 0.00 0.00 3.01
387 388 4.640771 ACCCACACATGTATCTGAGTTT 57.359 40.909 0.00 0.00 0.00 2.66
388 389 4.579869 ACCCACACATGTATCTGAGTTTC 58.420 43.478 0.00 0.00 0.00 2.78
389 390 3.941483 CCCACACATGTATCTGAGTTTCC 59.059 47.826 0.00 0.00 0.00 3.13
390 391 4.323792 CCCACACATGTATCTGAGTTTCCT 60.324 45.833 0.00 0.00 0.00 3.36
391 392 5.104941 CCCACACATGTATCTGAGTTTCCTA 60.105 44.000 0.00 0.00 0.00 2.94
392 393 6.408548 CCCACACATGTATCTGAGTTTCCTAT 60.409 42.308 0.00 0.00 0.00 2.57
393 394 6.703607 CCACACATGTATCTGAGTTTCCTATC 59.296 42.308 0.00 0.00 0.00 2.08
394 395 7.267857 CACACATGTATCTGAGTTTCCTATCA 58.732 38.462 0.00 0.00 0.00 2.15
395 396 7.765819 CACACATGTATCTGAGTTTCCTATCAA 59.234 37.037 0.00 0.00 0.00 2.57
396 397 8.489489 ACACATGTATCTGAGTTTCCTATCAAT 58.511 33.333 0.00 0.00 0.00 2.57
397 398 9.987272 CACATGTATCTGAGTTTCCTATCAATA 57.013 33.333 0.00 0.00 0.00 1.90
398 399 9.988815 ACATGTATCTGAGTTTCCTATCAATAC 57.011 33.333 0.00 0.00 0.00 1.89
399 400 9.987272 CATGTATCTGAGTTTCCTATCAATACA 57.013 33.333 0.00 0.00 35.88 2.29
401 402 9.817809 TGTATCTGAGTTTCCTATCAATACAAC 57.182 33.333 0.00 0.00 32.66 3.32
407 408 9.982651 TGAGTTTCCTATCAATACAACTATAGC 57.017 33.333 0.00 0.00 0.00 2.97
408 409 9.982651 GAGTTTCCTATCAATACAACTATAGCA 57.017 33.333 0.00 0.00 0.00 3.49
411 412 9.725019 TTTCCTATCAATACAACTATAGCATGG 57.275 33.333 0.00 0.00 0.00 3.66
412 413 8.664669 TCCTATCAATACAACTATAGCATGGA 57.335 34.615 0.00 0.00 0.00 3.41
413 414 9.271921 TCCTATCAATACAACTATAGCATGGAT 57.728 33.333 0.00 0.00 0.00 3.41
471 472 7.839680 AACCAATTTATTATTGCCTCTAGGG 57.160 36.000 0.00 0.00 35.18 3.53
484 485 4.437682 CCTCTAGGGCATATTTCCAACA 57.562 45.455 0.00 0.00 0.00 3.33
860 885 5.011586 CACTTTTCCCCTCCCGTAAAAATA 58.988 41.667 0.00 0.00 0.00 1.40
987 1022 2.676471 ACAGCCGGGTTGCCATTC 60.676 61.111 11.10 0.00 0.00 2.67
1042 1077 2.571216 CCGGTGTTCCACTCGGACT 61.571 63.158 14.90 0.00 44.62 3.85
1050 1085 2.737180 CACTCGGACTGGTGCACT 59.263 61.111 17.98 0.00 0.00 4.40
1061 1096 3.633361 GGTGCACTAGCTTCACCTT 57.367 52.632 17.98 0.00 45.04 3.50
1111 1146 2.028112 GTGCAGGTGACCATCTTCTACA 60.028 50.000 3.63 0.00 0.00 2.74
1203 1238 4.265056 AACCAGCACCACCCCGAC 62.265 66.667 0.00 0.00 0.00 4.79
1583 1671 5.046591 TCAGGCTTACATACAGTGCTAACTT 60.047 40.000 0.00 0.00 32.98 2.66
1718 1809 1.491670 GCGACGTGCATCATCTATGT 58.508 50.000 0.00 0.00 45.45 2.29
2136 2230 1.488393 GGGCTGCAGGAGTTCTTCTAT 59.512 52.381 17.12 0.00 0.00 1.98
2336 2430 0.674581 CTCGCCAGGTTGATTCAGCA 60.675 55.000 2.83 0.00 0.00 4.41
2344 2438 2.053627 GGTTGATTCAGCAAAACGCAG 58.946 47.619 2.83 0.00 46.13 5.18
2366 2461 2.235891 GGGGTTTGTGAGAAAATCCGT 58.764 47.619 0.00 0.00 40.65 4.69
2457 2552 1.702401 TGGGTGCAAGTTGAGGTATGA 59.298 47.619 7.16 0.00 0.00 2.15
2587 2682 1.726865 CAGCGCAAAAGTGTGTGGA 59.273 52.632 11.47 0.00 37.58 4.02
2646 2741 5.317733 TGAAACGTGTCACAAATTTTCCT 57.682 34.783 3.71 0.00 0.00 3.36
2647 2742 5.336744 TGAAACGTGTCACAAATTTTCCTC 58.663 37.500 3.71 0.00 0.00 3.71
2649 2744 2.286772 ACGTGTCACAAATTTTCCTCGC 60.287 45.455 3.42 0.00 0.00 5.03
2667 2762 0.668535 GCGCTTTTTCAGGACCACTT 59.331 50.000 0.00 0.00 0.00 3.16
2737 2832 4.469552 GTGGAATAAACCGGAAAAGTTCG 58.530 43.478 9.46 0.00 0.00 3.95
2821 2916 1.056700 ACGGCTTAGCTCCCATGGAT 61.057 55.000 15.22 0.00 0.00 3.41
2955 3050 8.181904 TGCATCTCCTTTTCAGTTCTTTTATT 57.818 30.769 0.00 0.00 0.00 1.40
2956 3051 9.295825 TGCATCTCCTTTTCAGTTCTTTTATTA 57.704 29.630 0.00 0.00 0.00 0.98
2957 3052 9.780413 GCATCTCCTTTTCAGTTCTTTTATTAG 57.220 33.333 0.00 0.00 0.00 1.73
2992 3101 2.896685 GGAATGTGATTTGGGGAACACA 59.103 45.455 0.00 0.00 45.06 3.72
2997 3106 3.772025 TGTGATTTGGGGAACACAGTTTT 59.228 39.130 0.00 0.00 38.14 2.43
3010 3119 0.508641 CAGTTTTCGTCTGGTCTGCG 59.491 55.000 0.00 0.00 0.00 5.18
3013 3122 2.725203 TTTTCGTCTGGTCTGCGGGG 62.725 60.000 0.00 0.00 0.00 5.73
3050 3159 3.708615 GCAAGTAGCTGTTGGGAACCTG 61.709 54.545 11.42 0.00 46.30 4.00
3076 3185 3.804036 TCCTATCCAAATACAACAGCCG 58.196 45.455 0.00 0.00 0.00 5.52
3084 3193 1.530323 ATACAACAGCCGGTGGAAAC 58.470 50.000 1.90 0.00 0.00 2.78
3117 3226 6.149633 GCTCCGAAGACAACATAATTTTGTT 58.850 36.000 8.29 8.29 40.39 2.83
3162 3282 5.300752 AGAAGCACCATAGAATTATCCACG 58.699 41.667 0.00 0.00 0.00 4.94
3175 3295 8.202745 AGAATTATCCACGAATTGAAGAAGAC 57.797 34.615 0.00 0.00 0.00 3.01
3190 3310 1.940613 GAAGACGCCCGCTTATTTCAT 59.059 47.619 0.00 0.00 0.00 2.57
3212 3332 4.336889 TGTGGCTGGATTATAGCAGTAC 57.663 45.455 0.00 0.00 42.88 2.73
3228 3348 2.224079 CAGTACATGCACTTCGCTTTGT 59.776 45.455 0.00 0.00 43.06 2.83
3246 3366 5.508224 GCTTTGTGTAAACAAGATGATACGC 59.492 40.000 0.00 0.00 0.00 4.42
3257 3377 1.705337 ATGATACGCTGCGTGTTGCC 61.705 55.000 35.11 18.32 45.60 4.52
3280 3400 4.201812 CGCGGGAATCGATTGCAATATATT 60.202 41.667 27.71 14.35 42.43 1.28
3317 3437 7.554476 TGGTTGTATGAAACATGAATATTCGGA 59.446 33.333 10.80 0.00 38.10 4.55
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.231478 TCGAGACTGGGATTTGTCACTC 59.769 50.000 0.00 0.00 35.81 3.51
1 2 2.248248 TCGAGACTGGGATTTGTCACT 58.752 47.619 0.00 0.00 35.81 3.41
3 4 3.676049 CGAATCGAGACTGGGATTTGTCA 60.676 47.826 0.00 0.00 33.25 3.58
5 6 2.233922 ACGAATCGAGACTGGGATTTGT 59.766 45.455 10.55 10.79 40.66 2.83
6 7 2.604914 CACGAATCGAGACTGGGATTTG 59.395 50.000 10.55 9.87 39.11 2.32
7 8 2.893637 CACGAATCGAGACTGGGATTT 58.106 47.619 10.55 0.00 33.25 2.17
9 10 0.103208 GCACGAATCGAGACTGGGAT 59.897 55.000 10.55 0.00 0.00 3.85
10 11 1.511305 GCACGAATCGAGACTGGGA 59.489 57.895 10.55 0.00 0.00 4.37
11 12 1.519455 GGCACGAATCGAGACTGGG 60.519 63.158 10.55 0.00 0.00 4.45
12 13 0.389817 TTGGCACGAATCGAGACTGG 60.390 55.000 10.55 0.00 0.00 4.00
13 14 0.716108 GTTGGCACGAATCGAGACTG 59.284 55.000 10.55 0.00 0.00 3.51
14 15 0.389948 GGTTGGCACGAATCGAGACT 60.390 55.000 10.55 0.00 0.00 3.24
15 16 1.359459 GGGTTGGCACGAATCGAGAC 61.359 60.000 10.55 3.74 0.00 3.36
16 17 1.079405 GGGTTGGCACGAATCGAGA 60.079 57.895 10.55 0.00 0.00 4.04
17 18 0.953471 TTGGGTTGGCACGAATCGAG 60.953 55.000 10.55 1.74 0.00 4.04
18 19 1.071642 TTGGGTTGGCACGAATCGA 59.928 52.632 10.55 0.00 0.00 3.59
19 20 1.209127 GTTGGGTTGGCACGAATCG 59.791 57.895 0.00 0.00 0.00 3.34
20 21 0.240945 CTGTTGGGTTGGCACGAATC 59.759 55.000 0.00 0.00 0.00 2.52
21 22 0.179004 TCTGTTGGGTTGGCACGAAT 60.179 50.000 0.00 0.00 0.00 3.34
22 23 1.098712 GTCTGTTGGGTTGGCACGAA 61.099 55.000 0.00 0.00 0.00 3.85
23 24 1.525077 GTCTGTTGGGTTGGCACGA 60.525 57.895 0.00 0.00 0.00 4.35
24 25 1.821759 TGTCTGTTGGGTTGGCACG 60.822 57.895 0.00 0.00 0.00 5.34
25 26 0.751643 AGTGTCTGTTGGGTTGGCAC 60.752 55.000 0.00 0.00 0.00 5.01
26 27 0.033601 AAGTGTCTGTTGGGTTGGCA 60.034 50.000 0.00 0.00 0.00 4.92
27 28 1.067060 GAAAGTGTCTGTTGGGTTGGC 59.933 52.381 0.00 0.00 0.00 4.52
28 29 1.333619 CGAAAGTGTCTGTTGGGTTGG 59.666 52.381 0.00 0.00 0.00 3.77
29 30 1.333619 CCGAAAGTGTCTGTTGGGTTG 59.666 52.381 0.00 0.00 0.00 3.77
30 31 1.210967 TCCGAAAGTGTCTGTTGGGTT 59.789 47.619 0.00 0.00 0.00 4.11
31 32 0.834612 TCCGAAAGTGTCTGTTGGGT 59.165 50.000 0.00 0.00 0.00 4.51
32 33 1.070134 TCTCCGAAAGTGTCTGTTGGG 59.930 52.381 0.00 0.00 0.00 4.12
33 34 2.526304 TCTCCGAAAGTGTCTGTTGG 57.474 50.000 0.00 0.00 0.00 3.77
34 35 4.810790 AGTATCTCCGAAAGTGTCTGTTG 58.189 43.478 0.00 0.00 0.00 3.33
35 36 5.221461 ACAAGTATCTCCGAAAGTGTCTGTT 60.221 40.000 0.00 0.00 0.00 3.16
36 37 4.281182 ACAAGTATCTCCGAAAGTGTCTGT 59.719 41.667 0.00 0.00 0.00 3.41
37 38 4.810790 ACAAGTATCTCCGAAAGTGTCTG 58.189 43.478 0.00 0.00 0.00 3.51
38 39 5.711036 ACTACAAGTATCTCCGAAAGTGTCT 59.289 40.000 0.00 0.00 0.00 3.41
39 40 5.800941 CACTACAAGTATCTCCGAAAGTGTC 59.199 44.000 0.00 0.00 0.00 3.67
40 41 5.710984 CACTACAAGTATCTCCGAAAGTGT 58.289 41.667 0.00 0.00 0.00 3.55
41 42 4.563184 GCACTACAAGTATCTCCGAAAGTG 59.437 45.833 0.00 0.00 35.94 3.16
42 43 4.219944 TGCACTACAAGTATCTCCGAAAGT 59.780 41.667 0.00 0.00 0.00 2.66
43 44 4.563184 GTGCACTACAAGTATCTCCGAAAG 59.437 45.833 10.32 0.00 0.00 2.62
44 45 4.491676 GTGCACTACAAGTATCTCCGAAA 58.508 43.478 10.32 0.00 0.00 3.46
45 46 3.119245 GGTGCACTACAAGTATCTCCGAA 60.119 47.826 17.98 0.00 0.00 4.30
46 47 2.426024 GGTGCACTACAAGTATCTCCGA 59.574 50.000 17.98 0.00 0.00 4.55
47 48 2.427453 AGGTGCACTACAAGTATCTCCG 59.573 50.000 17.98 0.00 0.00 4.63
48 49 4.473477 AAGGTGCACTACAAGTATCTCC 57.527 45.455 17.98 0.00 0.00 3.71
49 50 7.382759 GCTATAAAGGTGCACTACAAGTATCTC 59.617 40.741 17.98 0.00 0.00 2.75
50 51 7.210873 GCTATAAAGGTGCACTACAAGTATCT 58.789 38.462 17.98 0.00 0.00 1.98
51 52 6.424207 GGCTATAAAGGTGCACTACAAGTATC 59.576 42.308 17.98 0.00 0.00 2.24
52 53 6.126883 TGGCTATAAAGGTGCACTACAAGTAT 60.127 38.462 17.98 8.62 0.00 2.12
53 54 5.188163 TGGCTATAAAGGTGCACTACAAGTA 59.812 40.000 17.98 2.89 0.00 2.24
54 55 4.019681 TGGCTATAAAGGTGCACTACAAGT 60.020 41.667 17.98 1.79 0.00 3.16
55 56 4.332819 GTGGCTATAAAGGTGCACTACAAG 59.667 45.833 17.98 8.25 0.00 3.16
56 57 4.258543 GTGGCTATAAAGGTGCACTACAA 58.741 43.478 17.98 0.66 0.00 2.41
57 58 3.370103 GGTGGCTATAAAGGTGCACTACA 60.370 47.826 17.98 0.00 0.00 2.74
58 59 3.203716 GGTGGCTATAAAGGTGCACTAC 58.796 50.000 17.98 0.06 0.00 2.73
59 60 2.171870 GGGTGGCTATAAAGGTGCACTA 59.828 50.000 17.98 1.23 0.00 2.74
60 61 1.064685 GGGTGGCTATAAAGGTGCACT 60.065 52.381 17.98 0.00 0.00 4.40
61 62 1.340600 TGGGTGGCTATAAAGGTGCAC 60.341 52.381 8.80 8.80 0.00 4.57
62 63 0.995803 TGGGTGGCTATAAAGGTGCA 59.004 50.000 0.00 0.00 0.00 4.57
63 64 1.064685 ACTGGGTGGCTATAAAGGTGC 60.065 52.381 0.00 0.00 0.00 5.01
64 65 3.366052 AACTGGGTGGCTATAAAGGTG 57.634 47.619 0.00 0.00 0.00 4.00
65 66 3.118519 CGTAACTGGGTGGCTATAAAGGT 60.119 47.826 0.00 0.00 0.00 3.50
66 67 3.118519 ACGTAACTGGGTGGCTATAAAGG 60.119 47.826 0.00 0.00 0.00 3.11
67 68 4.133013 ACGTAACTGGGTGGCTATAAAG 57.867 45.455 0.00 0.00 0.00 1.85
68 69 4.255301 CAACGTAACTGGGTGGCTATAAA 58.745 43.478 0.00 0.00 0.00 1.40
69 70 3.261390 ACAACGTAACTGGGTGGCTATAA 59.739 43.478 0.00 0.00 0.00 0.98
70 71 2.833338 ACAACGTAACTGGGTGGCTATA 59.167 45.455 0.00 0.00 0.00 1.31
71 72 1.626825 ACAACGTAACTGGGTGGCTAT 59.373 47.619 0.00 0.00 0.00 2.97
72 73 1.050204 ACAACGTAACTGGGTGGCTA 58.950 50.000 0.00 0.00 0.00 3.93
73 74 0.534203 CACAACGTAACTGGGTGGCT 60.534 55.000 0.00 0.00 0.00 4.75
74 75 0.533308 TCACAACGTAACTGGGTGGC 60.533 55.000 0.00 0.00 0.00 5.01
75 76 1.223187 GTCACAACGTAACTGGGTGG 58.777 55.000 0.00 0.00 0.00 4.61
76 77 0.856641 CGTCACAACGTAACTGGGTG 59.143 55.000 0.00 0.00 43.94 4.61
77 78 3.277652 CGTCACAACGTAACTGGGT 57.722 52.632 0.00 0.00 43.94 4.51
86 87 1.004715 GGTGTACCAAACGTCACAACG 60.005 52.381 5.35 0.00 44.58 4.10
87 88 1.331447 GGGTGTACCAAACGTCACAAC 59.669 52.381 3.11 0.62 39.85 3.32
88 89 1.666054 GGGTGTACCAAACGTCACAA 58.334 50.000 3.11 0.00 39.85 3.33
89 90 3.383092 GGGTGTACCAAACGTCACA 57.617 52.632 3.11 0.00 39.85 3.58
99 100 2.215942 AGGAATGCTTTGGGTGTACC 57.784 50.000 0.00 0.00 40.81 3.34
100 101 2.676342 CGTAGGAATGCTTTGGGTGTAC 59.324 50.000 0.00 0.00 0.00 2.90
101 102 2.980568 CGTAGGAATGCTTTGGGTGTA 58.019 47.619 0.00 0.00 0.00 2.90
102 103 1.821216 CGTAGGAATGCTTTGGGTGT 58.179 50.000 0.00 0.00 0.00 4.16
128 129 2.816087 ACCATGAGATTGTGCAACTCAC 59.184 45.455 13.54 0.67 42.18 3.51
129 130 3.076621 GACCATGAGATTGTGCAACTCA 58.923 45.455 13.61 13.61 43.25 3.41
130 131 3.341823 AGACCATGAGATTGTGCAACTC 58.658 45.455 0.00 0.00 38.04 3.01
131 132 3.430042 AGACCATGAGATTGTGCAACT 57.570 42.857 0.00 0.00 38.04 3.16
132 133 4.095483 CCTTAGACCATGAGATTGTGCAAC 59.905 45.833 0.00 0.00 37.35 4.17
133 134 4.019411 TCCTTAGACCATGAGATTGTGCAA 60.019 41.667 0.00 0.00 0.00 4.08
134 135 3.519107 TCCTTAGACCATGAGATTGTGCA 59.481 43.478 0.00 0.00 0.00 4.57
135 136 4.142609 TCCTTAGACCATGAGATTGTGC 57.857 45.455 0.00 0.00 0.00 4.57
136 137 6.825213 TCATTTCCTTAGACCATGAGATTGTG 59.175 38.462 0.00 0.00 0.00 3.33
137 138 6.962182 TCATTTCCTTAGACCATGAGATTGT 58.038 36.000 0.00 0.00 0.00 2.71
138 139 8.997323 GTATCATTTCCTTAGACCATGAGATTG 58.003 37.037 0.00 0.00 29.44 2.67
139 140 8.943085 AGTATCATTTCCTTAGACCATGAGATT 58.057 33.333 0.00 0.00 29.44 2.40
140 141 8.503428 AGTATCATTTCCTTAGACCATGAGAT 57.497 34.615 0.00 0.00 29.44 2.75
141 142 7.921041 AGTATCATTTCCTTAGACCATGAGA 57.079 36.000 0.00 0.00 29.44 3.27
142 143 8.206867 TCAAGTATCATTTCCTTAGACCATGAG 58.793 37.037 0.00 0.00 29.44 2.90
143 144 7.987458 GTCAAGTATCATTTCCTTAGACCATGA 59.013 37.037 0.00 0.00 0.00 3.07
144 145 7.770433 TGTCAAGTATCATTTCCTTAGACCATG 59.230 37.037 0.00 0.00 0.00 3.66
145 146 7.861629 TGTCAAGTATCATTTCCTTAGACCAT 58.138 34.615 0.00 0.00 0.00 3.55
146 147 7.252612 TGTCAAGTATCATTTCCTTAGACCA 57.747 36.000 0.00 0.00 0.00 4.02
147 148 8.738645 AATGTCAAGTATCATTTCCTTAGACC 57.261 34.615 0.00 0.00 31.35 3.85
154 155 9.508567 GCTTTTCTAATGTCAAGTATCATTTCC 57.491 33.333 0.00 0.00 36.06 3.13
160 161 9.709600 GCTAAAGCTTTTCTAATGTCAAGTATC 57.290 33.333 18.47 0.00 38.21 2.24
161 162 9.231297 TGCTAAAGCTTTTCTAATGTCAAGTAT 57.769 29.630 18.47 0.00 42.66 2.12
162 163 8.615878 TGCTAAAGCTTTTCTAATGTCAAGTA 57.384 30.769 18.47 0.96 42.66 2.24
163 164 7.510549 TGCTAAAGCTTTTCTAATGTCAAGT 57.489 32.000 18.47 0.00 42.66 3.16
164 165 9.495754 GTATGCTAAAGCTTTTCTAATGTCAAG 57.504 33.333 18.47 5.49 42.66 3.02
165 166 8.175069 CGTATGCTAAAGCTTTTCTAATGTCAA 58.825 33.333 18.47 0.00 42.66 3.18
166 167 7.547722 TCGTATGCTAAAGCTTTTCTAATGTCA 59.452 33.333 18.47 4.72 42.66 3.58
167 168 7.906160 TCGTATGCTAAAGCTTTTCTAATGTC 58.094 34.615 18.47 1.59 42.66 3.06
168 169 7.843490 TCGTATGCTAAAGCTTTTCTAATGT 57.157 32.000 18.47 0.66 42.66 2.71
169 170 8.391106 AGTTCGTATGCTAAAGCTTTTCTAATG 58.609 33.333 18.47 5.69 42.66 1.90
170 171 8.494016 AGTTCGTATGCTAAAGCTTTTCTAAT 57.506 30.769 18.47 8.96 42.66 1.73
171 172 7.900782 AGTTCGTATGCTAAAGCTTTTCTAA 57.099 32.000 18.47 0.00 42.66 2.10
172 173 7.219535 CGTAGTTCGTATGCTAAAGCTTTTCTA 59.780 37.037 18.47 4.25 37.04 2.10
173 174 6.034683 CGTAGTTCGTATGCTAAAGCTTTTCT 59.965 38.462 18.47 2.60 37.04 2.52
174 175 6.034256 TCGTAGTTCGTATGCTAAAGCTTTTC 59.966 38.462 18.47 10.34 40.27 2.29
175 176 5.865552 TCGTAGTTCGTATGCTAAAGCTTTT 59.134 36.000 18.47 1.19 40.27 2.27
176 177 5.404946 TCGTAGTTCGTATGCTAAAGCTTT 58.595 37.500 17.30 17.30 40.27 3.51
177 178 4.990257 TCGTAGTTCGTATGCTAAAGCTT 58.010 39.130 3.26 0.00 40.27 3.74
178 179 4.627611 TCGTAGTTCGTATGCTAAAGCT 57.372 40.909 3.26 0.00 40.27 3.74
179 180 5.213675 AGATCGTAGTTCGTATGCTAAAGC 58.786 41.667 0.00 0.00 40.80 3.51
180 181 7.220300 ACAAAGATCGTAGTTCGTATGCTAAAG 59.780 37.037 0.00 0.00 40.80 1.85
181 182 7.008901 CACAAAGATCGTAGTTCGTATGCTAAA 59.991 37.037 0.00 0.00 40.80 1.85
182 183 6.471198 CACAAAGATCGTAGTTCGTATGCTAA 59.529 38.462 0.00 0.00 40.80 3.09
183 184 5.969435 CACAAAGATCGTAGTTCGTATGCTA 59.031 40.000 0.00 0.00 40.80 3.49
184 185 4.798907 CACAAAGATCGTAGTTCGTATGCT 59.201 41.667 0.00 0.00 40.80 3.79
185 186 4.548346 GCACAAAGATCGTAGTTCGTATGC 60.548 45.833 0.00 0.00 40.80 3.14
186 187 4.798907 AGCACAAAGATCGTAGTTCGTATG 59.201 41.667 0.00 0.00 40.80 2.39
187 188 4.995124 AGCACAAAGATCGTAGTTCGTAT 58.005 39.130 0.00 0.00 40.80 3.06
188 189 4.430137 AGCACAAAGATCGTAGTTCGTA 57.570 40.909 0.00 0.00 40.80 3.43
189 190 3.299340 AGCACAAAGATCGTAGTTCGT 57.701 42.857 0.00 0.00 40.80 3.85
190 191 3.791887 CCTAGCACAAAGATCGTAGTTCG 59.208 47.826 0.00 0.00 41.41 3.95
191 192 3.552294 GCCTAGCACAAAGATCGTAGTTC 59.448 47.826 0.00 0.00 0.00 3.01
192 193 3.195825 AGCCTAGCACAAAGATCGTAGTT 59.804 43.478 0.00 0.00 0.00 2.24
193 194 2.761208 AGCCTAGCACAAAGATCGTAGT 59.239 45.455 0.00 0.00 0.00 2.73
194 195 3.444703 AGCCTAGCACAAAGATCGTAG 57.555 47.619 0.00 0.00 0.00 3.51
195 196 3.887621 AAGCCTAGCACAAAGATCGTA 57.112 42.857 0.00 0.00 0.00 3.43
196 197 2.770164 AAGCCTAGCACAAAGATCGT 57.230 45.000 0.00 0.00 0.00 3.73
197 198 3.126831 CCTAAGCCTAGCACAAAGATCG 58.873 50.000 0.00 0.00 0.00 3.69
198 199 4.408182 TCCTAAGCCTAGCACAAAGATC 57.592 45.455 0.00 0.00 0.00 2.75
199 200 5.128919 CAATCCTAAGCCTAGCACAAAGAT 58.871 41.667 0.00 0.00 0.00 2.40
200 201 4.517285 CAATCCTAAGCCTAGCACAAAGA 58.483 43.478 0.00 0.00 0.00 2.52
201 202 3.629398 CCAATCCTAAGCCTAGCACAAAG 59.371 47.826 0.00 0.00 0.00 2.77
202 203 3.620488 CCAATCCTAAGCCTAGCACAAA 58.380 45.455 0.00 0.00 0.00 2.83
203 204 2.092429 CCCAATCCTAAGCCTAGCACAA 60.092 50.000 0.00 0.00 0.00 3.33
204 205 1.490490 CCCAATCCTAAGCCTAGCACA 59.510 52.381 0.00 0.00 0.00 4.57
205 206 1.490910 ACCCAATCCTAAGCCTAGCAC 59.509 52.381 0.00 0.00 0.00 4.40
206 207 1.768870 GACCCAATCCTAAGCCTAGCA 59.231 52.381 0.00 0.00 0.00 3.49
207 208 2.050918 AGACCCAATCCTAAGCCTAGC 58.949 52.381 0.00 0.00 0.00 3.42
208 209 3.456277 ACAAGACCCAATCCTAAGCCTAG 59.544 47.826 0.00 0.00 0.00 3.02
209 210 3.454812 GACAAGACCCAATCCTAAGCCTA 59.545 47.826 0.00 0.00 0.00 3.93
210 211 2.239907 GACAAGACCCAATCCTAAGCCT 59.760 50.000 0.00 0.00 0.00 4.58
211 212 2.644676 GACAAGACCCAATCCTAAGCC 58.355 52.381 0.00 0.00 0.00 4.35
212 213 2.026262 TGGACAAGACCCAATCCTAAGC 60.026 50.000 0.00 0.00 32.06 3.09
213 214 4.080356 TGATGGACAAGACCCAATCCTAAG 60.080 45.833 0.00 0.00 37.22 2.18
214 215 3.849574 TGATGGACAAGACCCAATCCTAA 59.150 43.478 0.00 0.00 37.22 2.69
215 216 3.199946 GTGATGGACAAGACCCAATCCTA 59.800 47.826 0.00 0.00 37.22 2.94
216 217 2.025887 GTGATGGACAAGACCCAATCCT 60.026 50.000 0.00 0.00 37.22 3.24
217 218 2.290896 TGTGATGGACAAGACCCAATCC 60.291 50.000 0.00 0.00 37.22 3.01
218 219 3.071874 TGTGATGGACAAGACCCAATC 57.928 47.619 0.00 0.00 37.22 2.67
219 220 3.010472 TGATGTGATGGACAAGACCCAAT 59.990 43.478 0.00 0.00 38.36 3.16
220 221 2.374839 TGATGTGATGGACAAGACCCAA 59.625 45.455 0.00 0.00 38.36 4.12
221 222 1.984424 TGATGTGATGGACAAGACCCA 59.016 47.619 0.00 0.00 38.36 4.51
222 223 2.787473 TGATGTGATGGACAAGACCC 57.213 50.000 0.00 0.00 38.36 4.46
223 224 4.521146 AGAATGATGTGATGGACAAGACC 58.479 43.478 0.00 0.00 38.36 3.85
224 225 5.879223 AGAAGAATGATGTGATGGACAAGAC 59.121 40.000 0.00 0.00 38.36 3.01
225 226 6.058553 AGAAGAATGATGTGATGGACAAGA 57.941 37.500 0.00 0.00 38.36 3.02
226 227 7.854557 TTAGAAGAATGATGTGATGGACAAG 57.145 36.000 0.00 0.00 38.36 3.16
227 228 8.048514 TCATTAGAAGAATGATGTGATGGACAA 58.951 33.333 0.00 0.00 38.36 3.18
228 229 7.567458 TCATTAGAAGAATGATGTGATGGACA 58.433 34.615 0.00 0.00 39.53 4.02
229 230 8.618702 ATCATTAGAAGAATGATGTGATGGAC 57.381 34.615 11.08 0.00 43.52 4.02
238 239 6.877855 CGGGATCACATCATTAGAAGAATGAT 59.122 38.462 6.90 6.90 45.40 2.45
239 240 6.183361 ACGGGATCACATCATTAGAAGAATGA 60.183 38.462 0.00 2.66 40.50 2.57
240 241 5.994054 ACGGGATCACATCATTAGAAGAATG 59.006 40.000 0.00 0.00 0.00 2.67
241 242 6.179906 ACGGGATCACATCATTAGAAGAAT 57.820 37.500 0.00 0.00 0.00 2.40
242 243 5.614324 ACGGGATCACATCATTAGAAGAA 57.386 39.130 0.00 0.00 0.00 2.52
243 244 5.614324 AACGGGATCACATCATTAGAAGA 57.386 39.130 0.00 0.00 0.00 2.87
244 245 7.154656 TGATAACGGGATCACATCATTAGAAG 58.845 38.462 0.00 0.00 30.75 2.85
245 246 7.061566 TGATAACGGGATCACATCATTAGAA 57.938 36.000 0.00 0.00 30.75 2.10
246 247 6.664428 TGATAACGGGATCACATCATTAGA 57.336 37.500 0.00 0.00 30.75 2.10
247 248 7.121974 GTTGATAACGGGATCACATCATTAG 57.878 40.000 0.00 0.00 35.56 1.73
274 275 2.092267 TCCTGACCATGGACATTGGATG 60.092 50.000 21.47 5.31 0.00 3.51
275 276 2.207988 TCCTGACCATGGACATTGGAT 58.792 47.619 21.47 0.00 0.00 3.41
276 277 1.667595 TCCTGACCATGGACATTGGA 58.332 50.000 21.47 18.93 0.00 3.53
277 278 2.493278 GTTTCCTGACCATGGACATTGG 59.507 50.000 21.47 16.85 32.65 3.16
278 279 2.493278 GGTTTCCTGACCATGGACATTG 59.507 50.000 21.47 12.72 39.57 2.82
279 280 2.807676 GGTTTCCTGACCATGGACATT 58.192 47.619 21.47 0.00 39.57 2.71
280 281 1.340017 CGGTTTCCTGACCATGGACAT 60.340 52.381 21.47 0.00 39.78 3.06
281 282 0.036164 CGGTTTCCTGACCATGGACA 59.964 55.000 21.47 18.47 39.78 4.02
282 283 0.036306 ACGGTTTCCTGACCATGGAC 59.964 55.000 21.47 13.94 39.78 4.02
283 284 0.036164 CACGGTTTCCTGACCATGGA 59.964 55.000 21.47 0.00 39.78 3.41
284 285 0.036164 TCACGGTTTCCTGACCATGG 59.964 55.000 11.19 11.19 39.78 3.66
285 286 1.156736 GTCACGGTTTCCTGACCATG 58.843 55.000 0.00 0.00 39.78 3.66
286 287 3.625745 GTCACGGTTTCCTGACCAT 57.374 52.632 0.00 0.00 39.78 3.55
289 290 1.002087 AGATGGTCACGGTTTCCTGAC 59.998 52.381 0.00 8.67 36.78 3.51
290 291 1.001974 CAGATGGTCACGGTTTCCTGA 59.998 52.381 0.00 0.00 0.00 3.86
291 292 1.270839 ACAGATGGTCACGGTTTCCTG 60.271 52.381 0.00 0.00 0.00 3.86
292 293 1.056660 ACAGATGGTCACGGTTTCCT 58.943 50.000 0.00 0.00 0.00 3.36
293 294 1.535462 CAACAGATGGTCACGGTTTCC 59.465 52.381 0.00 0.00 0.00 3.13
294 295 2.489971 TCAACAGATGGTCACGGTTTC 58.510 47.619 0.00 0.00 0.00 2.78
295 296 2.631160 TCAACAGATGGTCACGGTTT 57.369 45.000 0.00 0.00 0.00 3.27
296 297 2.038426 TGATCAACAGATGGTCACGGTT 59.962 45.455 0.00 0.00 44.28 4.44
297 298 1.623311 TGATCAACAGATGGTCACGGT 59.377 47.619 0.00 0.00 44.28 4.83
298 299 2.385013 TGATCAACAGATGGTCACGG 57.615 50.000 0.00 0.00 44.28 4.94
302 303 2.349886 GCTCGTTGATCAACAGATGGTC 59.650 50.000 32.06 16.84 41.20 4.02
303 304 2.027745 AGCTCGTTGATCAACAGATGGT 60.028 45.455 32.06 23.11 41.20 3.55
304 305 2.625737 AGCTCGTTGATCAACAGATGG 58.374 47.619 32.06 18.60 41.20 3.51
305 306 4.428209 ACTAGCTCGTTGATCAACAGATG 58.572 43.478 32.06 22.34 41.20 2.90
306 307 4.158579 TGACTAGCTCGTTGATCAACAGAT 59.841 41.667 32.06 26.87 41.20 2.90
307 308 3.506067 TGACTAGCTCGTTGATCAACAGA 59.494 43.478 32.06 26.81 41.20 3.41
308 309 3.838120 TGACTAGCTCGTTGATCAACAG 58.162 45.455 32.06 26.93 41.20 3.16
309 310 3.934457 TGACTAGCTCGTTGATCAACA 57.066 42.857 32.06 20.24 41.20 3.33
310 311 5.786401 AATTGACTAGCTCGTTGATCAAC 57.214 39.130 25.68 25.68 37.92 3.18
311 312 6.863275 TCTAATTGACTAGCTCGTTGATCAA 58.137 36.000 3.38 3.38 0.00 2.57
312 313 6.451064 TCTAATTGACTAGCTCGTTGATCA 57.549 37.500 0.00 0.00 0.00 2.92
313 314 5.918011 CCTCTAATTGACTAGCTCGTTGATC 59.082 44.000 0.00 0.00 0.00 2.92
314 315 5.737635 GCCTCTAATTGACTAGCTCGTTGAT 60.738 44.000 0.00 0.00 0.00 2.57
315 316 4.440250 GCCTCTAATTGACTAGCTCGTTGA 60.440 45.833 0.00 0.00 0.00 3.18
316 317 3.799420 GCCTCTAATTGACTAGCTCGTTG 59.201 47.826 0.00 0.00 0.00 4.10
317 318 3.702045 AGCCTCTAATTGACTAGCTCGTT 59.298 43.478 0.00 0.00 0.00 3.85
318 319 3.292460 AGCCTCTAATTGACTAGCTCGT 58.708 45.455 0.00 0.00 0.00 4.18
319 320 4.314740 AAGCCTCTAATTGACTAGCTCG 57.685 45.455 0.00 0.00 0.00 5.03
320 321 6.399639 AGTAAGCCTCTAATTGACTAGCTC 57.600 41.667 0.00 0.00 0.00 4.09
321 322 6.492087 CCTAGTAAGCCTCTAATTGACTAGCT 59.508 42.308 0.00 0.00 35.60 3.32
322 323 6.294843 CCCTAGTAAGCCTCTAATTGACTAGC 60.295 46.154 0.00 0.00 35.60 3.42
323 324 7.005296 TCCCTAGTAAGCCTCTAATTGACTAG 58.995 42.308 0.00 0.00 36.32 2.57
324 325 6.776603 GTCCCTAGTAAGCCTCTAATTGACTA 59.223 42.308 0.00 0.00 0.00 2.59
325 326 5.599242 GTCCCTAGTAAGCCTCTAATTGACT 59.401 44.000 0.00 0.00 0.00 3.41
326 327 5.363005 TGTCCCTAGTAAGCCTCTAATTGAC 59.637 44.000 0.00 0.00 0.00 3.18
327 328 5.525484 TGTCCCTAGTAAGCCTCTAATTGA 58.475 41.667 0.00 0.00 0.00 2.57
328 329 5.871396 TGTCCCTAGTAAGCCTCTAATTG 57.129 43.478 0.00 0.00 0.00 2.32
329 330 5.308237 CCATGTCCCTAGTAAGCCTCTAATT 59.692 44.000 0.00 0.00 0.00 1.40
330 331 4.841246 CCATGTCCCTAGTAAGCCTCTAAT 59.159 45.833 0.00 0.00 0.00 1.73
331 332 4.223953 CCATGTCCCTAGTAAGCCTCTAA 58.776 47.826 0.00 0.00 0.00 2.10
332 333 3.206866 ACCATGTCCCTAGTAAGCCTCTA 59.793 47.826 0.00 0.00 0.00 2.43
333 334 2.022918 ACCATGTCCCTAGTAAGCCTCT 60.023 50.000 0.00 0.00 0.00 3.69
334 335 2.103263 CACCATGTCCCTAGTAAGCCTC 59.897 54.545 0.00 0.00 0.00 4.70
335 336 2.119495 CACCATGTCCCTAGTAAGCCT 58.881 52.381 0.00 0.00 0.00 4.58
336 337 1.838077 ACACCATGTCCCTAGTAAGCC 59.162 52.381 0.00 0.00 0.00 4.35
337 338 3.270877 CAACACCATGTCCCTAGTAAGC 58.729 50.000 0.00 0.00 0.00 3.09
338 339 4.504858 GACAACACCATGTCCCTAGTAAG 58.495 47.826 0.00 0.00 43.11 2.34
339 340 4.546829 GACAACACCATGTCCCTAGTAA 57.453 45.455 0.00 0.00 43.11 2.24
348 349 3.585289 TGGGTACATAGACAACACCATGT 59.415 43.478 0.00 0.00 35.81 3.21
349 350 3.938963 GTGGGTACATAGACAACACCATG 59.061 47.826 0.00 0.00 0.00 3.66
350 351 3.585289 TGTGGGTACATAGACAACACCAT 59.415 43.478 0.00 0.00 31.47 3.55
351 352 2.973406 TGTGGGTACATAGACAACACCA 59.027 45.455 0.00 0.00 31.47 4.17
352 353 3.244284 TGTGTGGGTACATAGACAACACC 60.244 47.826 0.00 0.00 39.39 4.16
353 354 3.997762 TGTGTGGGTACATAGACAACAC 58.002 45.455 0.00 0.00 39.39 3.32
354 355 4.041075 ACATGTGTGGGTACATAGACAACA 59.959 41.667 0.00 0.00 39.17 3.33
355 356 4.575885 ACATGTGTGGGTACATAGACAAC 58.424 43.478 0.00 0.00 39.17 3.32
356 357 4.901197 ACATGTGTGGGTACATAGACAA 57.099 40.909 0.00 0.00 39.17 3.18
357 358 5.897250 AGATACATGTGTGGGTACATAGACA 59.103 40.000 9.11 0.00 39.17 3.41
358 359 6.040504 TCAGATACATGTGTGGGTACATAGAC 59.959 42.308 9.11 0.00 39.17 2.59
359 360 6.133356 TCAGATACATGTGTGGGTACATAGA 58.867 40.000 9.11 0.00 39.17 1.98
360 361 6.040955 ACTCAGATACATGTGTGGGTACATAG 59.959 42.308 9.11 0.00 39.17 2.23
361 362 5.897250 ACTCAGATACATGTGTGGGTACATA 59.103 40.000 9.11 0.00 39.17 2.29
362 363 4.716784 ACTCAGATACATGTGTGGGTACAT 59.283 41.667 9.11 0.00 41.77 2.29
363 364 4.093743 ACTCAGATACATGTGTGGGTACA 58.906 43.478 9.11 0.00 34.63 2.90
364 365 4.737855 ACTCAGATACATGTGTGGGTAC 57.262 45.455 9.11 0.00 0.00 3.34
365 366 5.338056 GGAAACTCAGATACATGTGTGGGTA 60.338 44.000 9.11 0.00 0.00 3.69
366 367 4.565652 GGAAACTCAGATACATGTGTGGGT 60.566 45.833 9.11 6.49 0.00 4.51
367 368 3.941483 GGAAACTCAGATACATGTGTGGG 59.059 47.826 9.11 5.82 0.00 4.61
368 369 4.836825 AGGAAACTCAGATACATGTGTGG 58.163 43.478 9.11 0.00 32.90 4.17
369 370 7.267857 TGATAGGAAACTCAGATACATGTGTG 58.732 38.462 9.11 3.44 43.67 3.82
370 371 7.423844 TGATAGGAAACTCAGATACATGTGT 57.576 36.000 9.11 0.10 43.67 3.72
371 372 8.899427 ATTGATAGGAAACTCAGATACATGTG 57.101 34.615 9.11 0.00 43.67 3.21
372 373 9.988815 GTATTGATAGGAAACTCAGATACATGT 57.011 33.333 2.69 2.69 43.67 3.21
373 374 9.987272 TGTATTGATAGGAAACTCAGATACATG 57.013 33.333 0.00 0.00 43.67 3.21
375 376 9.817809 GTTGTATTGATAGGAAACTCAGATACA 57.182 33.333 0.00 0.00 43.67 2.29
381 382 9.982651 GCTATAGTTGTATTGATAGGAAACTCA 57.017 33.333 0.84 0.00 43.67 3.41
382 383 9.982651 TGCTATAGTTGTATTGATAGGAAACTC 57.017 33.333 0.84 0.00 43.67 3.01
385 386 9.725019 CCATGCTATAGTTGTATTGATAGGAAA 57.275 33.333 0.84 0.00 0.00 3.13
386 387 9.100197 TCCATGCTATAGTTGTATTGATAGGAA 57.900 33.333 0.84 0.00 0.00 3.36
387 388 8.664669 TCCATGCTATAGTTGTATTGATAGGA 57.335 34.615 0.84 0.00 0.00 2.94
445 446 9.533831 CCCTAGAGGCAATAATAAATTGGTTAT 57.466 33.333 0.00 0.00 33.58 1.89
446 447 8.934023 CCCTAGAGGCAATAATAAATTGGTTA 57.066 34.615 0.00 0.00 0.00 2.85
447 448 7.839680 CCCTAGAGGCAATAATAAATTGGTT 57.160 36.000 0.00 0.00 0.00 3.67
463 464 4.437682 TGTTGGAAATATGCCCTAGAGG 57.562 45.455 0.00 0.00 39.47 3.69
464 465 5.006386 GGATGTTGGAAATATGCCCTAGAG 58.994 45.833 0.00 0.00 29.72 2.43
465 466 4.415179 TGGATGTTGGAAATATGCCCTAGA 59.585 41.667 0.00 0.00 34.96 2.43
466 467 4.520492 GTGGATGTTGGAAATATGCCCTAG 59.480 45.833 0.00 0.00 34.96 3.02
467 468 4.469657 GTGGATGTTGGAAATATGCCCTA 58.530 43.478 0.00 0.00 34.96 3.53
468 469 3.299503 GTGGATGTTGGAAATATGCCCT 58.700 45.455 0.00 0.00 34.96 5.19
469 470 2.365293 GGTGGATGTTGGAAATATGCCC 59.635 50.000 0.00 0.00 34.96 5.36
470 471 2.034558 CGGTGGATGTTGGAAATATGCC 59.965 50.000 0.00 0.00 34.96 4.40
471 472 2.034558 CCGGTGGATGTTGGAAATATGC 59.965 50.000 0.00 0.00 36.35 3.14
472 473 2.034558 GCCGGTGGATGTTGGAAATATG 59.965 50.000 1.90 0.00 0.00 1.78
473 474 2.306847 GCCGGTGGATGTTGGAAATAT 58.693 47.619 1.90 0.00 0.00 1.28
474 475 1.683629 GGCCGGTGGATGTTGGAAATA 60.684 52.381 1.90 0.00 0.00 1.40
475 476 0.970427 GGCCGGTGGATGTTGGAAAT 60.970 55.000 1.90 0.00 0.00 2.17
476 477 1.605165 GGCCGGTGGATGTTGGAAA 60.605 57.895 1.90 0.00 0.00 3.13
477 478 2.034999 GGCCGGTGGATGTTGGAA 59.965 61.111 1.90 0.00 0.00 3.53
478 479 4.402528 CGGCCGGTGGATGTTGGA 62.403 66.667 20.10 0.00 0.00 3.53
479 480 3.697439 ATCGGCCGGTGGATGTTGG 62.697 63.158 27.83 0.00 0.00 3.77
480 481 2.124736 ATCGGCCGGTGGATGTTG 60.125 61.111 27.83 0.00 0.00 3.33
481 482 2.124736 CATCGGCCGGTGGATGTT 60.125 61.111 31.13 0.00 36.23 2.71
502 503 3.950794 GAGGACGAACATGGCGGCA 62.951 63.158 16.34 16.34 38.88 5.69
654 674 3.367395 CGTCAGGTAGCTGATGAAGTTGA 60.367 47.826 31.49 4.62 41.52 3.18
860 885 4.956085 GCACTTTTTATGTCAAAAGGGGT 58.044 39.130 9.59 0.00 44.33 4.95
1050 1085 0.532573 CCGAGAGCAAGGTGAAGCTA 59.467 55.000 0.00 0.00 42.04 3.32
1111 1146 1.395826 GCCACCAGGTAGAGCGAGAT 61.396 60.000 0.00 0.00 37.19 2.75
1186 1221 4.265056 GTCGGGGTGGTGCTGGTT 62.265 66.667 0.00 0.00 0.00 3.67
1215 1250 1.273606 CAGTTGAAGAAGGAGCTCCGA 59.726 52.381 26.95 5.39 42.08 4.55
1583 1671 5.850557 AACAACAGATCAACCACATTCAA 57.149 34.783 0.00 0.00 0.00 2.69
1716 1807 1.819288 GACTGGGAGAAGATGACGACA 59.181 52.381 0.00 0.00 0.00 4.35
1718 1809 1.095600 CGACTGGGAGAAGATGACGA 58.904 55.000 0.00 0.00 0.00 4.20
2323 2417 1.680735 TGCGTTTTGCTGAATCAACCT 59.319 42.857 0.00 0.00 46.63 3.50
2409 2504 1.743394 GTTTTAGTCCCAGGCCAATCG 59.257 52.381 5.01 0.00 0.00 3.34
2472 2567 8.627208 ATGTGATGATTTAGTCTCAAAGTTGT 57.373 30.769 0.00 0.00 0.00 3.32
2556 2651 6.019075 CACTTTTGCGCTGCTACATTATAGTA 60.019 38.462 9.73 0.00 0.00 1.82
2557 2652 4.876107 ACTTTTGCGCTGCTACATTATAGT 59.124 37.500 9.73 0.00 0.00 2.12
2558 2653 5.200454 CACTTTTGCGCTGCTACATTATAG 58.800 41.667 9.73 0.00 0.00 1.31
2559 2654 4.634004 ACACTTTTGCGCTGCTACATTATA 59.366 37.500 9.73 0.00 0.00 0.98
2587 2682 4.411256 TTCCGAAAACTAGTGGACTGTT 57.589 40.909 0.00 0.00 0.00 3.16
2646 2741 1.227704 TGGTCCTGAAAAAGCGCGA 60.228 52.632 12.10 0.00 0.00 5.87
2647 2742 1.082104 GTGGTCCTGAAAAAGCGCG 60.082 57.895 0.00 0.00 0.00 6.86
2649 2744 1.600413 GCAAGTGGTCCTGAAAAAGCG 60.600 52.381 0.00 0.00 0.00 4.68
2667 2762 1.004161 TCCTTTTCGGGACATGATGCA 59.996 47.619 0.00 0.00 0.00 3.96
2821 2916 0.033920 ACGCATGCTCTCACACTTGA 59.966 50.000 17.13 0.00 0.00 3.02
2883 2978 3.943479 TAGCACCGCGTTGCCGAAT 62.943 57.895 25.64 9.27 44.14 3.34
2955 3050 6.292923 TCACATTCCGAAGTTCTTTTTCCTA 58.707 36.000 0.56 0.00 0.00 2.94
2956 3051 5.130350 TCACATTCCGAAGTTCTTTTTCCT 58.870 37.500 0.56 0.00 0.00 3.36
2957 3052 5.432885 TCACATTCCGAAGTTCTTTTTCC 57.567 39.130 0.56 0.00 0.00 3.13
2958 3053 7.096065 CCAAATCACATTCCGAAGTTCTTTTTC 60.096 37.037 0.56 0.00 0.00 2.29
2992 3101 0.600255 CCGCAGACCAGACGAAAACT 60.600 55.000 0.00 0.00 0.00 2.66
2997 3106 3.957435 ATCCCCGCAGACCAGACGA 62.957 63.158 0.00 0.00 0.00 4.20
3010 3119 0.748005 CACGTGGTTCATGGATCCCC 60.748 60.000 9.90 2.86 0.00 4.81
3013 3122 1.131126 CTTGCACGTGGTTCATGGATC 59.869 52.381 18.88 0.00 0.00 3.36
3050 3159 6.330278 GCTGTTGTATTTGGATAGGAAAACC 58.670 40.000 0.00 0.00 0.00 3.27
3051 3160 6.330278 GGCTGTTGTATTTGGATAGGAAAAC 58.670 40.000 0.00 0.00 0.00 2.43
3058 3167 3.275143 CACCGGCTGTTGTATTTGGATA 58.725 45.455 0.00 0.00 0.00 2.59
3084 3193 1.137675 TGTCTTCGGAGCAGATGGATG 59.862 52.381 0.00 0.00 0.00 3.51
3140 3259 5.297547 TCGTGGATAATTCTATGGTGCTTC 58.702 41.667 0.00 0.00 0.00 3.86
3162 3282 0.097150 GCGGGCGTCTTCTTCAATTC 59.903 55.000 0.00 0.00 0.00 2.17
3173 3293 1.400494 ACAATGAAATAAGCGGGCGTC 59.600 47.619 0.00 0.00 0.00 5.19
3175 3295 1.533756 CCACAATGAAATAAGCGGGCG 60.534 52.381 0.00 0.00 0.00 6.13
3190 3310 3.931907 ACTGCTATAATCCAGCCACAA 57.068 42.857 0.00 0.00 38.29 3.33
3212 3332 6.459642 TTGTTTACACAAAGCGAAGTGCATG 61.460 40.000 0.00 0.00 41.48 4.06
3217 3337 5.295787 TCATCTTGTTTACACAAAGCGAAGT 59.704 36.000 0.00 0.00 42.53 3.01
3228 3348 3.305897 CGCAGCGTATCATCTTGTTTACA 59.694 43.478 6.65 0.00 0.00 2.41
3257 3377 0.865111 TATTGCAATCGATTCCCGCG 59.135 50.000 16.86 0.00 38.37 6.46
3280 3400 8.175925 TGTTTCATACAACCAAATCTCATTGA 57.824 30.769 0.00 0.00 32.64 2.57


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.