AutoCloner

Multiple sequence alignment - TraesCS4B01G054300

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)

BLAST Results

Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

	qseqid	sseqid	percentage.identical	alignment.length	no.mismatch	no.gap.openings	qstart	qend	sstart	send	evalue	bitscore
0	TraesCS4B01G054300	chr4B	100.000	3785	0	0	1	3785	43108091	43104307	0.000000e+00	6990.0
1	TraesCS4B01G054300	chr4B	90.385	52	2	3	286	334	346592827	346592878	8.780000e-07	65.8
2	TraesCS4B01G054300	chr4D	94.162	2364	101	10	895	3230	30215975	30213621	0.000000e+00	3567.0
3	TraesCS4B01G054300	chr4D	90.975	277	12	5	3520	3785	30213107	30212833	1.000000e-95	361.0
4	TraesCS4B01G054300	chr4D	88.142	253	24	5	3230	3476	30213575	30213323	2.860000e-76	296.0
5	TraesCS4B01G054300	chr4D	88.660	97	10	1	757	852	331709986	331709890	2.390000e-22	117.0
6	TraesCS4B01G054300	chr4D	83.478	115	6	5	74	183	30216222	30216116	1.120000e-15	95.3
7	TraesCS4B01G054300	chr4D	89.231	65	3	3	336	398	255414446	255414384	1.130000e-10	78.7
8	TraesCS4B01G054300	chr4D	89.091	55	3	3	286	337	412018072	412018018	8.780000e-07	65.8
9	TraesCS4B01G054300	chr4D	90.385	52	2	3	286	334	432145710	432145761	8.780000e-07	65.8
10	TraesCS4B01G054300	chr4D	89.091	55	3	3	286	337	462702945	462702891	8.780000e-07	65.8
11	TraesCS4B01G054300	chr4D	100.000	28	0	0	3478	3505	30213289	30213262	7.000000e-03	52.8
12	TraesCS4B01G054300	chr4A	93.058	2420	126	19	844	3230	572835957	572838367	0.000000e+00	3500.0
13	TraesCS4B01G054300	chr4A	93.165	278	15	4	3230	3505	572838413	572838688	4.550000e-109	405.0
14	TraesCS4B01G054300	chr4A	86.919	344	31	8	4	336	572835569	572835909	1.280000e-99	374.0
15	TraesCS4B01G054300	chr4A	87.273	275	17	5	3519	3785	572838864	572839128	7.950000e-77	298.0
16	TraesCS4B01G054300	chr4A	84.906	159	16	5	757	907	545602870	545603028	1.820000e-33	154.0
17	TraesCS4B01G054300	chr4A	90.722	97	8	1	757	852	674523454	674523550	1.100000e-25	128.0
18	TraesCS4B01G054300	chr7D	88.855	332	24	3	421	742	525778182	525778510	2.740000e-106	396.0
19	TraesCS4B01G054300	chr7D	93.023	86	5	1	337	421	525778068	525778153	1.430000e-24	124.0
20	TraesCS4B01G054300	chr7D	86.667	105	14	0	623	727	106314377	106314481	2.390000e-22	117.0
21	TraesCS4B01G054300	chr7D	87.879	66	4	3	335	398	393668392	393668455	1.460000e-09	75.0
22	TraesCS4B01G054300	chr6D	87.536	345	30	3	421	754	271126471	271126813	1.650000e-103	387.0
23	TraesCS4B01G054300	chr6D	84.615	130	17	3	757	884	384225117	384225245	3.970000e-25	126.0
24	TraesCS4B01G054300	chr6D	89.062	64	3	3	337	398	240813656	240813717	4.050000e-10	76.8
25	TraesCS4B01G054300	chr6D	87.879	66	5	3	335	398	98590025	98589961	1.460000e-09	75.0
26	TraesCS4B01G054300	chr6D	89.091	55	3	3	286	337	336639052	336638998	8.780000e-07	65.8
27	TraesCS4B01G054300	chr5B	81.154	260	32	11	489	734	705972746	705973002	3.860000e-45	193.0
28	TraesCS4B01G054300	chr5B	81.757	148	16	3	529	665	540646102	540645955	3.090000e-21	113.0
29	TraesCS4B01G054300	chr5A	83.125	160	19	5	757	908	631862093	631862252	5.100000e-29	139.0
30	TraesCS4B01G054300	chr3A	84.211	133	21	0	627	759	514556939	514556807	3.070000e-26	130.0
31	TraesCS4B01G054300	chr3D	89.583	96	9	1	757	852	98538294	98538200	1.850000e-23	121.0
32	TraesCS4B01G054300	chr3D	89.231	65	3	3	336	398	551884608	551884670	1.130000e-10	78.7
33	TraesCS4B01G054300	chr3D	90.385	52	2	3	286	334	547231403	547231454	8.780000e-07	65.8
34	TraesCS4B01G054300	chr6B	88.660	97	11	0	757	853	350016896	350016992	6.640000e-23	119.0
35	TraesCS4B01G054300	chr2B	89.474	95	8	2	759	852	451836899	451836806	6.640000e-23	119.0
36	TraesCS4B01G054300	chr2A	87.255	102	13	0	758	859	779292157	779292258	2.390000e-22	117.0
37	TraesCS4B01G054300	chr2D	89.231	65	3	3	336	398	280440315	280440377	1.130000e-10	78.7
38	TraesCS4B01G054300	chr2D	89.062	64	3	3	337	398	335452712	335452651	4.050000e-10	76.8
39	TraesCS4B01G054300	chr2D	93.478	46	3	0	839	884	482794569	482794614	6.780000e-08	69.4
40	TraesCS4B01G054300	chr5D	87.879	66	4	3	335	398	90059928	90059991	1.460000e-09	75.0
41	TraesCS4B01G054300	chr1D	85.507	69	7	3	271	336	350257182	350257114	6.780000e-08	69.4
42	TraesCS4B01G054300	chrUn	90.385	52	2	3	286	334	52593924	52593975	8.780000e-07	65.8

These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

	query	scaffold	start	end	length	rev.comp	avg.bitscore	max.bitscore	avg.percent.identical	query.start	query.end	num_hsp	groupid	homo_length
0	TraesCS4B01G054300	chr4B	43104307	43108091	3784	True	6990.00	6990	100.00000	1	3785	1	chr4B.!!$R1	3784
1	TraesCS4B01G054300	chr4D	30212833	30216222	3389	True	874.42	3567	91.35140	74	3785	5	chr4D.!!$R5	3711
2	TraesCS4B01G054300	chr4A	572835569	572839128	3559	False	1144.25	3500	90.10375	4	3785	4	chr4A.!!$F3	3781

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability	Orientation
375	384	0.041090	ATCAGCCCCGGTTCCATTTT	59.959	50.0	0.00	0.00	0.00	1.82	F
653	662	0.106015	AGGTGGTCTTTTTGCAGCCT	60.106	50.0	0.00	0.00	0.00	4.58	F
710	719	0.106769	TGCACTTCCTTTGCACAGGA	60.107	50.0	17.81	17.81	45.06	3.86	F

Position	MSA Position	Penalty	Sequence	TM	GC	End Stability	Orientation
1581	1614	0.661552	TCGTCCTCTTATTCCTCGCG	59.338	55.000	5.87	R
2637	2670	0.449388	CACGGAGATTCTTTGCCAGC	59.551	55.000	4.85	R
2873	2927	4.259356	CATCACATCTGGTCATCAAGTGT	58.741	43.478	3.55	R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability
32	33	1.890625	GCCATGCATGTTCAGCCCAA	61.891	55.000	24.58	0.00	0.00	4.12
33	34	0.609151	CCATGCATGTTCAGCCCAAA	59.391	50.000	24.58	0.00	0.00	3.28
34	35	1.002201	CCATGCATGTTCAGCCCAAAA	59.998	47.619	24.58	0.00	0.00	2.44
42	43	4.613925	TGTTCAGCCCAAAATGCAAATA	57.386	36.364	0.00	0.00	0.00	1.40
50	51	6.256321	CAGCCCAAAATGCAAATAATGACTAC	59.744	38.462	0.00	0.00	0.00	2.73
51	52	5.231991	GCCCAAAATGCAAATAATGACTACG	59.768	40.000	0.00	0.00	0.00	3.51
55	56	7.253750	CCAAAATGCAAATAATGACTACGAAGC	60.254	37.037	0.00	0.00	0.00	3.86
64	65	8.804688	AATAATGACTACGAAGCTAGTTCATC	57.195	34.615	8.82	3.19	34.44	2.92
69	70	3.157932	ACGAAGCTAGTTCATCTGCTC	57.842	47.619	0.00	0.00	34.44	4.26
189	197	9.912634	AGTACACATCCATAAAACAAAATCAAG	57.087	29.630	0.00	0.00	0.00	3.02
214	222	1.802880	CGTCATCCTCCAAACGGCTAG	60.803	57.143	0.00	0.00	0.00	3.42
227	236	5.684184	CCAAACGGCTAGTGTTTTTACTTTC	59.316	40.000	11.13	0.00	37.44	2.62
244	253	3.679980	ACTTTCTCGAAATCATGGTGTCG	59.320	43.478	12.58	12.58	34.85	4.35
245	254	2.293677	TCTCGAAATCATGGTGTCGG	57.706	50.000	18.33	9.35	34.32	4.79
269	278	6.528774	GGCATAAATAACCACAAACTTTACGG	59.471	38.462	0.00	0.00	0.00	4.02
293	302	8.620533	GGAAAAGATAAATTCCGAATGTTCAG	57.379	34.615	0.00	0.00	36.09	3.02
310	319	6.040209	TGTTCAGATTTTAAGCATGGCAAT	57.960	33.333	0.00	0.00	0.00	3.56
312	321	5.266733	TCAGATTTTAAGCATGGCAATCC	57.733	39.130	0.00	0.00	0.00	3.01
314	323	4.807304	CAGATTTTAAGCATGGCAATCCAC	59.193	41.667	0.00	0.00	46.92	4.02
316	325	4.888326	TTTTAAGCATGGCAATCCACTT	57.112	36.364	0.00	0.00	46.92	3.16
320	329	3.323751	AGCATGGCAATCCACTTTTTC	57.676	42.857	0.00	0.00	46.92	2.29
321	330	1.994779	GCATGGCAATCCACTTTTTCG	59.005	47.619	0.00	0.00	46.92	3.46
330	339	2.577449	CCACTTTTTCGTGGCAACTT	57.423	45.000	0.00	0.00	46.98	2.66
331	340	2.887337	CCACTTTTTCGTGGCAACTTT	58.113	42.857	0.00	0.00	46.98	2.66
332	341	4.035278	CCACTTTTTCGTGGCAACTTTA	57.965	40.909	0.00	0.00	46.98	1.85
333	342	4.041723	CCACTTTTTCGTGGCAACTTTAG	58.958	43.478	0.00	0.00	46.98	1.85
334	343	4.439563	CCACTTTTTCGTGGCAACTTTAGT	60.440	41.667	0.00	0.00	46.98	2.24
335	344	5.099575	CACTTTTTCGTGGCAACTTTAGTT	58.900	37.500	0.00	0.00	39.12	2.24
336	345	5.575218	CACTTTTTCGTGGCAACTTTAGTTT	59.425	36.000	0.00	0.00	35.83	2.66
337	346	6.090223	CACTTTTTCGTGGCAACTTTAGTTTT	59.910	34.615	0.00	0.00	35.83	2.43
338	347	6.647481	ACTTTTTCGTGGCAACTTTAGTTTTT	59.353	30.769	0.00	0.00	35.83	1.94
361	370	6.859420	TTTTTAAAAGAAAAGGGCATCAGC	57.141	33.333	0.14	0.00	41.10	4.26
371	380	4.424711	GCATCAGCCCCGGTTCCA	62.425	66.667	0.00	0.00	33.58	3.53
372	381	2.597340	CATCAGCCCCGGTTCCAT	59.403	61.111	0.00	0.00	0.00	3.41
373	382	1.076777	CATCAGCCCCGGTTCCATT	60.077	57.895	0.00	0.00	0.00	3.16
374	383	0.684153	CATCAGCCCCGGTTCCATTT	60.684	55.000	0.00	0.00	0.00	2.32
375	384	0.041090	ATCAGCCCCGGTTCCATTTT	59.959	50.000	0.00	0.00	0.00	1.82
376	385	0.610785	TCAGCCCCGGTTCCATTTTC	60.611	55.000	0.00	0.00	0.00	2.29
377	386	0.897863	CAGCCCCGGTTCCATTTTCA	60.898	55.000	0.00	0.00	0.00	2.69
378	387	0.041090	AGCCCCGGTTCCATTTTCAT	59.959	50.000	0.00	0.00	0.00	2.57
379	388	0.459899	GCCCCGGTTCCATTTTCATC	59.540	55.000	0.00	0.00	0.00	2.92
380	389	1.846007	CCCCGGTTCCATTTTCATCA	58.154	50.000	0.00	0.00	0.00	3.07
381	390	1.750778	CCCCGGTTCCATTTTCATCAG	59.249	52.381	0.00	0.00	0.00	2.90
382	391	2.620367	CCCCGGTTCCATTTTCATCAGA	60.620	50.000	0.00	0.00	0.00	3.27
383	392	3.088532	CCCGGTTCCATTTTCATCAGAA	58.911	45.455	0.00	0.00	0.00	3.02
384	393	3.509575	CCCGGTTCCATTTTCATCAGAAA	59.490	43.478	0.00	0.00	41.78	2.52
395	404	3.980646	TCATCAGAAAACAAACCACCG	57.019	42.857	0.00	0.00	0.00	4.94
396	405	3.546724	TCATCAGAAAACAAACCACCGA	58.453	40.909	0.00	0.00	0.00	4.69
397	406	3.563808	TCATCAGAAAACAAACCACCGAG	59.436	43.478	0.00	0.00	0.00	4.63
398	407	2.993937	TCAGAAAACAAACCACCGAGT	58.006	42.857	0.00	0.00	0.00	4.18
399	408	4.139859	TCAGAAAACAAACCACCGAGTA	57.860	40.909	0.00	0.00	0.00	2.59
400	409	3.872771	TCAGAAAACAAACCACCGAGTAC	59.127	43.478	0.00	0.00	0.00	2.73
401	410	3.623960	CAGAAAACAAACCACCGAGTACA	59.376	43.478	0.00	0.00	0.00	2.90
402	411	4.274950	CAGAAAACAAACCACCGAGTACAT	59.725	41.667	0.00	0.00	0.00	2.29
403	412	4.514066	AGAAAACAAACCACCGAGTACATC	59.486	41.667	0.00	0.00	0.00	3.06
404	413	2.467566	ACAAACCACCGAGTACATCC	57.532	50.000	0.00	0.00	0.00	3.51
405	414	1.975680	ACAAACCACCGAGTACATCCT	59.024	47.619	0.00	0.00	0.00	3.24
406	415	2.370849	ACAAACCACCGAGTACATCCTT	59.629	45.455	0.00	0.00	0.00	3.36
407	416	3.579586	ACAAACCACCGAGTACATCCTTA	59.420	43.478	0.00	0.00	0.00	2.69
408	417	4.224370	ACAAACCACCGAGTACATCCTTAT	59.776	41.667	0.00	0.00	0.00	1.73
409	418	5.183228	CAAACCACCGAGTACATCCTTATT	58.817	41.667	0.00	0.00	0.00	1.40
410	419	6.070653	ACAAACCACCGAGTACATCCTTATTA	60.071	38.462	0.00	0.00	0.00	0.98
411	420	5.526506	ACCACCGAGTACATCCTTATTAC	57.473	43.478	0.00	0.00	0.00	1.89
412	421	4.957954	ACCACCGAGTACATCCTTATTACA	59.042	41.667	0.00	0.00	0.00	2.41
413	422	5.068723	ACCACCGAGTACATCCTTATTACAG	59.931	44.000	0.00	0.00	0.00	2.74
414	423	4.982916	CACCGAGTACATCCTTATTACAGC	59.017	45.833	0.00	0.00	0.00	4.40
415	424	4.038883	ACCGAGTACATCCTTATTACAGCC	59.961	45.833	0.00	0.00	0.00	4.85
416	425	4.281182	CCGAGTACATCCTTATTACAGCCT	59.719	45.833	0.00	0.00	0.00	4.58
417	426	5.475909	CCGAGTACATCCTTATTACAGCCTA	59.524	44.000	0.00	0.00	0.00	3.93
418	427	6.380190	CGAGTACATCCTTATTACAGCCTAC	58.620	44.000	0.00	0.00	0.00	3.18
419	428	6.328641	AGTACATCCTTATTACAGCCTACG	57.671	41.667	0.00	0.00	0.00	3.51
420	429	4.602340	ACATCCTTATTACAGCCTACGG	57.398	45.455	0.00	0.00	0.00	4.02
421	430	4.220724	ACATCCTTATTACAGCCTACGGA	58.779	43.478	0.00	0.00	0.00	4.69
422	431	4.838986	ACATCCTTATTACAGCCTACGGAT	59.161	41.667	0.00	0.00	0.00	4.18
423	432	5.307196	ACATCCTTATTACAGCCTACGGATT	59.693	40.000	0.00	0.00	0.00	3.01
424	433	5.464030	TCCTTATTACAGCCTACGGATTC	57.536	43.478	0.00	0.00	0.00	2.52
425	434	4.897076	TCCTTATTACAGCCTACGGATTCA	59.103	41.667	0.00	0.00	0.00	2.57
426	435	5.010719	TCCTTATTACAGCCTACGGATTCAG	59.989	44.000	0.00	0.00	0.00	3.02
427	436	5.010719	CCTTATTACAGCCTACGGATTCAGA	59.989	44.000	0.00	0.00	0.00	3.27
428	437	6.462487	CCTTATTACAGCCTACGGATTCAGAA	60.462	42.308	0.00	0.00	0.00	3.02
429	438	4.811969	TTACAGCCTACGGATTCAGAAA	57.188	40.909	0.00	0.00	0.00	2.52
430	439	2.973945	ACAGCCTACGGATTCAGAAAC	58.026	47.619	0.00	0.00	0.00	2.78
431	440	2.301870	ACAGCCTACGGATTCAGAAACA	59.698	45.455	0.00	0.00	0.00	2.83
432	441	3.055094	ACAGCCTACGGATTCAGAAACAT	60.055	43.478	0.00	0.00	0.00	2.71
433	442	4.161565	ACAGCCTACGGATTCAGAAACATA	59.838	41.667	0.00	0.00	0.00	2.29
434	443	5.116180	CAGCCTACGGATTCAGAAACATAA	58.884	41.667	0.00	0.00	0.00	1.90
435	444	5.584649	CAGCCTACGGATTCAGAAACATAAA	59.415	40.000	0.00	0.00	0.00	1.40
436	445	6.093495	CAGCCTACGGATTCAGAAACATAAAA	59.907	38.462	0.00	0.00	0.00	1.52
437	446	6.093633	AGCCTACGGATTCAGAAACATAAAAC	59.906	38.462	0.00	0.00	0.00	2.43
438	447	6.093633	GCCTACGGATTCAGAAACATAAAACT	59.906	38.462	0.00	0.00	0.00	2.66
439	448	7.676572	GCCTACGGATTCAGAAACATAAAACTC	60.677	40.741	0.00	0.00	0.00	3.01
440	449	7.549488	CCTACGGATTCAGAAACATAAAACTCT	59.451	37.037	0.00	0.00	0.00	3.24
441	450	9.582431	CTACGGATTCAGAAACATAAAACTCTA	57.418	33.333	0.00	0.00	0.00	2.43
442	451	8.252964	ACGGATTCAGAAACATAAAACTCTAC	57.747	34.615	0.00	0.00	0.00	2.59
443	452	8.095169	ACGGATTCAGAAACATAAAACTCTACT	58.905	33.333	0.00	0.00	0.00	2.57
444	453	8.936864	CGGATTCAGAAACATAAAACTCTACTT	58.063	33.333	0.00	0.00	0.00	2.24
448	457	9.621629	TTCAGAAACATAAAACTCTACTTTCCA	57.378	29.630	0.00	0.00	0.00	3.53
449	458	9.793259	TCAGAAACATAAAACTCTACTTTCCAT	57.207	29.630	0.00	0.00	0.00	3.41
459	468	9.793259	AAAACTCTACTTTCCATAACAGAATCA	57.207	29.630	0.00	0.00	0.00	2.57
460	469	9.442047	AAACTCTACTTTCCATAACAGAATCAG	57.558	33.333	0.00	0.00	0.00	2.90
461	470	8.140112	ACTCTACTTTCCATAACAGAATCAGT	57.860	34.615	0.00	0.00	0.00	3.41
462	471	8.254508	ACTCTACTTTCCATAACAGAATCAGTC	58.745	37.037	0.00	0.00	0.00	3.51
463	472	8.367660	TCTACTTTCCATAACAGAATCAGTCT	57.632	34.615	0.00	0.00	36.88	3.24
464	473	9.475620	TCTACTTTCCATAACAGAATCAGTCTA	57.524	33.333	0.00	0.00	33.56	2.59
468	477	9.482627	CTTTCCATAACAGAATCAGTCTATACC	57.517	37.037	0.00	0.00	33.56	2.73
469	478	8.547481	TTCCATAACAGAATCAGTCTATACCA	57.453	34.615	0.00	0.00	33.56	3.25
470	479	8.547481	TCCATAACAGAATCAGTCTATACCAA	57.453	34.615	0.00	0.00	33.56	3.67
471	480	8.642432	TCCATAACAGAATCAGTCTATACCAAG	58.358	37.037	0.00	0.00	33.56	3.61
472	481	7.386299	CCATAACAGAATCAGTCTATACCAAGC	59.614	40.741	0.00	0.00	33.56	4.01
473	482	4.938080	ACAGAATCAGTCTATACCAAGCG	58.062	43.478	0.00	0.00	33.56	4.68
474	483	4.402793	ACAGAATCAGTCTATACCAAGCGT	59.597	41.667	0.00	0.00	33.56	5.07
475	484	5.593095	ACAGAATCAGTCTATACCAAGCGTA	59.407	40.000	0.00	0.00	33.56	4.42
476	485	6.096423	ACAGAATCAGTCTATACCAAGCGTAA	59.904	38.462	0.00	0.00	33.56	3.18
477	486	6.638873	CAGAATCAGTCTATACCAAGCGTAAG	59.361	42.308	0.00	0.00	33.56	2.34
478	487	4.913335	TCAGTCTATACCAAGCGTAAGG	57.087	45.455	0.00	0.00	38.28	2.69
479	488	3.067742	TCAGTCTATACCAAGCGTAAGGC	59.932	47.826	0.00	0.00	44.05	4.35
484	493	1.745232	TACCAAGCGTAAGGCATTGG	58.255	50.000	14.37	14.37	46.50	3.16
485	494	0.965363	ACCAAGCGTAAGGCATTGGG	60.965	55.000	17.71	6.56	45.92	4.12
486	495	3.345557	ACCAAGCGTAAGGCATTGGGA	62.346	52.381	17.71	0.00	45.92	4.37
487	496	4.798252	ACCAAGCGTAAGGCATTGGGAA	62.798	50.000	17.71	0.00	45.92	3.97
488	497	6.869162	TACCAAGCGTAAGGCATTGGGAAA	62.869	45.833	17.71	6.97	45.92	3.13
490	499	2.734276	GCGTAAGGCATTGGGAAAAA	57.266	45.000	0.00	0.00	42.87	1.94
491	500	2.333926	GCGTAAGGCATTGGGAAAAAC	58.666	47.619	0.00	0.00	42.87	2.43
492	501	2.029380	GCGTAAGGCATTGGGAAAAACT	60.029	45.455	0.00	0.00	42.87	2.66
493	502	3.191791	GCGTAAGGCATTGGGAAAAACTA	59.808	43.478	0.00	0.00	42.87	2.24
494	503	4.729595	CGTAAGGCATTGGGAAAAACTAC	58.270	43.478	0.00	0.00	0.00	2.73
495	504	4.457949	CGTAAGGCATTGGGAAAAACTACT	59.542	41.667	0.00	0.00	0.00	2.57
496	505	4.871933	AAGGCATTGGGAAAAACTACTG	57.128	40.909	0.00	0.00	0.00	2.74
497	506	3.165071	AGGCATTGGGAAAAACTACTGG	58.835	45.455	0.00	0.00	0.00	4.00
498	507	2.353704	GGCATTGGGAAAAACTACTGGC	60.354	50.000	0.00	0.00	0.00	4.85
499	508	2.298729	GCATTGGGAAAAACTACTGGCA	59.701	45.455	0.00	0.00	0.00	4.92
500	509	3.860754	GCATTGGGAAAAACTACTGGCAC	60.861	47.826	0.00	0.00	0.00	5.01
501	510	2.738587	TGGGAAAAACTACTGGCACA	57.261	45.000	0.00	0.00	0.00	4.57
502	511	3.019799	TGGGAAAAACTACTGGCACAA	57.980	42.857	0.00	0.00	38.70	3.33
503	512	2.691011	TGGGAAAAACTACTGGCACAAC	59.309	45.455	0.00	0.00	38.70	3.32
504	513	2.691011	GGGAAAAACTACTGGCACAACA	59.309	45.455	0.00	0.00	38.70	3.33
505	514	3.490249	GGGAAAAACTACTGGCACAACAC	60.490	47.826	0.00	0.00	38.70	3.32
506	515	3.490249	GGAAAAACTACTGGCACAACACC	60.490	47.826	0.00	0.00	38.70	4.16
507	516	2.428544	AAACTACTGGCACAACACCA	57.571	45.000	0.00	0.00	38.70	4.17
508	517	1.675552	AACTACTGGCACAACACCAC	58.324	50.000	0.00	0.00	38.70	4.16
509	518	0.179029	ACTACTGGCACAACACCACC	60.179	55.000	0.00	0.00	38.70	4.61
510	519	0.889186	CTACTGGCACAACACCACCC	60.889	60.000	0.00	0.00	38.70	4.61
511	520	1.636769	TACTGGCACAACACCACCCA	61.637	55.000	0.00	0.00	38.70	4.51
512	521	1.756172	CTGGCACAACACCACCCAA	60.756	57.895	0.00	0.00	38.70	4.12
513	522	1.305297	TGGCACAACACCACCCAAA	60.305	52.632	0.00	0.00	31.92	3.28
514	523	0.904865	TGGCACAACACCACCCAAAA	60.905	50.000	0.00	0.00	31.92	2.44
515	524	0.179086	GGCACAACACCACCCAAAAG	60.179	55.000	0.00	0.00	0.00	2.27
516	525	0.179086	GCACAACACCACCCAAAAGG	60.179	55.000	0.00	0.00	43.78	3.11
517	526	1.479709	CACAACACCACCCAAAAGGA	58.520	50.000	0.00	0.00	39.89	3.36
518	527	1.827969	CACAACACCACCCAAAAGGAA	59.172	47.619	0.00	0.00	39.89	3.36
519	528	2.107366	ACAACACCACCCAAAAGGAAG	58.893	47.619	0.00	0.00	39.89	3.46
520	529	1.412343	CAACACCACCCAAAAGGAAGG	59.588	52.381	0.00	0.00	39.89	3.46
521	530	0.634465	ACACCACCCAAAAGGAAGGT	59.366	50.000	0.00	0.00	44.80	3.50
526	535	2.364972	ACCCAAAAGGAAGGTGACAG	57.635	50.000	0.00	0.00	39.89	3.51
527	536	1.850345	ACCCAAAAGGAAGGTGACAGA	59.150	47.619	0.00	0.00	39.89	3.41
528	537	2.243736	ACCCAAAAGGAAGGTGACAGAA	59.756	45.455	0.00	0.00	39.89	3.02
529	538	2.887152	CCCAAAAGGAAGGTGACAGAAG	59.113	50.000	0.00	0.00	38.24	2.85
530	539	3.555966	CCAAAAGGAAGGTGACAGAAGT	58.444	45.455	0.00	0.00	0.00	3.01
531	540	4.445735	CCCAAAAGGAAGGTGACAGAAGTA	60.446	45.833	0.00	0.00	38.24	2.24
532	541	5.316987	CCAAAAGGAAGGTGACAGAAGTAT	58.683	41.667	0.00	0.00	0.00	2.12
533	542	5.412904	CCAAAAGGAAGGTGACAGAAGTATC	59.587	44.000	0.00	0.00	0.00	2.24
534	543	5.825593	AAAGGAAGGTGACAGAAGTATCA	57.174	39.130	0.00	0.00	0.00	2.15
535	544	6.380079	AAAGGAAGGTGACAGAAGTATCAT	57.620	37.500	0.00	0.00	0.00	2.45
536	545	5.606348	AGGAAGGTGACAGAAGTATCATC	57.394	43.478	0.00	0.00	0.00	2.92
537	546	4.407296	AGGAAGGTGACAGAAGTATCATCC	59.593	45.833	0.00	0.00	0.00	3.51
538	547	4.443598	GGAAGGTGACAGAAGTATCATCCC	60.444	50.000	0.00	0.00	0.00	3.85
539	548	4.000928	AGGTGACAGAAGTATCATCCCT	57.999	45.455	0.00	0.00	0.00	4.20
540	549	3.964031	AGGTGACAGAAGTATCATCCCTC	59.036	47.826	0.00	0.00	0.00	4.30
541	550	3.070302	GGTGACAGAAGTATCATCCCTCC	59.930	52.174	0.00	0.00	0.00	4.30
542	551	3.706594	GTGACAGAAGTATCATCCCTCCA	59.293	47.826	0.00	0.00	0.00	3.86
543	552	4.346418	GTGACAGAAGTATCATCCCTCCAT	59.654	45.833	0.00	0.00	0.00	3.41
544	553	4.346127	TGACAGAAGTATCATCCCTCCATG	59.654	45.833	0.00	0.00	0.00	3.66
545	554	4.560739	ACAGAAGTATCATCCCTCCATGA	58.439	43.478	0.00	0.00	37.20	3.07
546	555	5.161135	ACAGAAGTATCATCCCTCCATGAT	58.839	41.667	0.00	1.76	44.28	2.45
547	556	5.248020	ACAGAAGTATCATCCCTCCATGATC	59.752	44.000	0.00	0.00	41.70	2.92
548	557	5.247792	CAGAAGTATCATCCCTCCATGATCA	59.752	44.000	0.00	0.00	41.70	2.92
549	558	5.248020	AGAAGTATCATCCCTCCATGATCAC	59.752	44.000	0.00	0.00	41.70	3.06
550	559	3.843027	AGTATCATCCCTCCATGATCACC	59.157	47.826	0.00	0.00	41.70	4.02
551	560	2.195153	TCATCCCTCCATGATCACCA	57.805	50.000	0.00	0.00	0.00	4.17
552	561	2.709966	TCATCCCTCCATGATCACCAT	58.290	47.619	0.00	0.00	35.44	3.55
553	562	2.641321	TCATCCCTCCATGATCACCATC	59.359	50.000	0.00	0.00	31.94	3.51
554	563	2.502068	TCCCTCCATGATCACCATCT	57.498	50.000	0.00	0.00	31.94	2.90
555	564	2.780414	TCCCTCCATGATCACCATCTT	58.220	47.619	0.00	0.00	31.94	2.40
556	565	2.440627	TCCCTCCATGATCACCATCTTG	59.559	50.000	0.00	0.00	35.05	3.02
557	566	2.174210	CCCTCCATGATCACCATCTTGT	59.826	50.000	0.00	0.00	33.96	3.16
558	567	3.474600	CCTCCATGATCACCATCTTGTC	58.525	50.000	0.00	0.00	33.96	3.18
559	568	3.136077	CCTCCATGATCACCATCTTGTCT	59.864	47.826	0.00	0.00	33.96	3.41
560	569	4.346127	CCTCCATGATCACCATCTTGTCTA	59.654	45.833	0.00	0.00	33.96	2.59
561	570	5.282055	TCCATGATCACCATCTTGTCTAC	57.718	43.478	0.00	0.00	33.96	2.59
562	571	4.964897	TCCATGATCACCATCTTGTCTACT	59.035	41.667	0.00	0.00	33.96	2.57
563	572	5.069648	TCCATGATCACCATCTTGTCTACTC	59.930	44.000	0.00	0.00	33.96	2.59
564	573	5.295950	CATGATCACCATCTTGTCTACTCC	58.704	45.833	0.00	0.00	31.94	3.85
565	574	3.706594	TGATCACCATCTTGTCTACTCCC	59.293	47.826	0.00	0.00	0.00	4.30
566	575	3.184382	TCACCATCTTGTCTACTCCCA	57.816	47.619	0.00	0.00	0.00	4.37
567	576	3.724478	TCACCATCTTGTCTACTCCCAT	58.276	45.455	0.00	0.00	0.00	4.00
568	577	3.706594	TCACCATCTTGTCTACTCCCATC	59.293	47.826	0.00	0.00	0.00	3.51
569	578	3.041946	ACCATCTTGTCTACTCCCATCC	58.958	50.000	0.00	0.00	0.00	3.51
570	579	3.041211	CCATCTTGTCTACTCCCATCCA	58.959	50.000	0.00	0.00	0.00	3.41
571	580	3.649981	CCATCTTGTCTACTCCCATCCAT	59.350	47.826	0.00	0.00	0.00	3.41
572	581	4.262808	CCATCTTGTCTACTCCCATCCATC	60.263	50.000	0.00	0.00	0.00	3.51
573	582	3.309296	TCTTGTCTACTCCCATCCATCC	58.691	50.000	0.00	0.00	0.00	3.51
574	583	3.051803	TCTTGTCTACTCCCATCCATCCT	60.052	47.826	0.00	0.00	0.00	3.24
575	584	2.964209	TGTCTACTCCCATCCATCCTC	58.036	52.381	0.00	0.00	0.00	3.71
576	585	2.252714	GTCTACTCCCATCCATCCTCC	58.747	57.143	0.00	0.00	0.00	4.30
577	586	1.150135	TCTACTCCCATCCATCCTCCC	59.850	57.143	0.00	0.00	0.00	4.30
578	587	0.948816	TACTCCCATCCATCCTCCCA	59.051	55.000	0.00	0.00	0.00	4.37
579	588	0.273161	ACTCCCATCCATCCTCCCAT	59.727	55.000	0.00	0.00	0.00	4.00
580	589	0.990374	CTCCCATCCATCCTCCCATC	59.010	60.000	0.00	0.00	0.00	3.51
581	590	0.574818	TCCCATCCATCCTCCCATCT	59.425	55.000	0.00	0.00	0.00	2.90
582	591	1.060323	TCCCATCCATCCTCCCATCTT	60.060	52.381	0.00	0.00	0.00	2.40
583	592	1.353694	CCCATCCATCCTCCCATCTTC	59.646	57.143	0.00	0.00	0.00	2.87
584	593	2.346529	CCATCCATCCTCCCATCTTCT	58.653	52.381	0.00	0.00	0.00	2.85
585	594	2.715336	CCATCCATCCTCCCATCTTCTT	59.285	50.000	0.00	0.00	0.00	2.52
586	595	3.244840	CCATCCATCCTCCCATCTTCTTC	60.245	52.174	0.00	0.00	0.00	2.87
587	596	3.135161	TCCATCCTCCCATCTTCTTCA	57.865	47.619	0.00	0.00	0.00	3.02
588	597	3.463825	TCCATCCTCCCATCTTCTTCAA	58.536	45.455	0.00	0.00	0.00	2.69
589	598	3.457380	TCCATCCTCCCATCTTCTTCAAG	59.543	47.826	0.00	0.00	0.00	3.02
590	599	3.434739	CCATCCTCCCATCTTCTTCAAGG	60.435	52.174	0.00	0.00	0.00	3.61
591	600	3.205519	TCCTCCCATCTTCTTCAAGGA	57.794	47.619	0.00	0.00	0.00	3.36
592	601	3.531059	TCCTCCCATCTTCTTCAAGGAA	58.469	45.455	0.00	0.00	0.00	3.36
593	602	4.114597	TCCTCCCATCTTCTTCAAGGAAT	58.885	43.478	0.00	0.00	0.00	3.01
594	603	5.288687	TCCTCCCATCTTCTTCAAGGAATA	58.711	41.667	0.00	0.00	0.00	1.75
595	604	5.913534	TCCTCCCATCTTCTTCAAGGAATAT	59.086	40.000	0.00	0.00	0.00	1.28
596	605	6.391055	TCCTCCCATCTTCTTCAAGGAATATT	59.609	38.462	0.00	0.00	0.00	1.28
597	606	6.489361	CCTCCCATCTTCTTCAAGGAATATTG	59.511	42.308	0.00	0.00	0.00	1.90
598	607	6.973642	TCCCATCTTCTTCAAGGAATATTGT	58.026	36.000	0.00	0.00	0.00	2.71
599	608	8.101309	TCCCATCTTCTTCAAGGAATATTGTA	57.899	34.615	0.00	0.00	0.00	2.41
600	609	8.213679	TCCCATCTTCTTCAAGGAATATTGTAG	58.786	37.037	0.00	0.00	0.00	2.74
601	610	7.040823	CCCATCTTCTTCAAGGAATATTGTAGC	60.041	40.741	0.00	0.00	30.23	3.58
602	611	7.307632	CCATCTTCTTCAAGGAATATTGTAGCG	60.308	40.741	0.00	0.00	30.23	4.26
603	612	6.873997	TCTTCTTCAAGGAATATTGTAGCGA	58.126	36.000	0.00	0.00	30.23	4.93
604	613	6.980978	TCTTCTTCAAGGAATATTGTAGCGAG	59.019	38.462	0.00	0.00	30.23	5.03
605	614	6.465439	TCTTCAAGGAATATTGTAGCGAGA	57.535	37.500	0.00	0.00	30.23	4.04
606	615	6.507900	TCTTCAAGGAATATTGTAGCGAGAG	58.492	40.000	0.00	0.00	30.23	3.20
607	616	5.854010	TCAAGGAATATTGTAGCGAGAGT	57.146	39.130	0.00	0.00	0.00	3.24
608	617	6.222038	TCAAGGAATATTGTAGCGAGAGTT	57.778	37.500	0.00	0.00	0.00	3.01
609	618	6.273825	TCAAGGAATATTGTAGCGAGAGTTC	58.726	40.000	0.00	0.00	0.00	3.01
610	619	5.203060	AGGAATATTGTAGCGAGAGTTCC	57.797	43.478	0.00	0.00	35.31	3.62
611	620	4.039366	AGGAATATTGTAGCGAGAGTTCCC	59.961	45.833	0.00	0.00	35.60	3.97
612	621	4.039366	GGAATATTGTAGCGAGAGTTCCCT	59.961	45.833	0.00	0.00	0.00	4.20
613	622	4.857509	ATATTGTAGCGAGAGTTCCCTC	57.142	45.455	0.00	0.00	38.04	4.30
623	632	2.758130	AGAGTTCCCTCTTCCTCATCC	58.242	52.381	0.00	0.00	46.08	3.51
624	633	2.317594	AGAGTTCCCTCTTCCTCATCCT	59.682	50.000	0.00	0.00	46.08	3.24
625	634	2.433970	GAGTTCCCTCTTCCTCATCCTG	59.566	54.545	0.00	0.00	34.69	3.86
626	635	2.045047	AGTTCCCTCTTCCTCATCCTGA	59.955	50.000	0.00	0.00	0.00	3.86
627	636	2.433970	GTTCCCTCTTCCTCATCCTGAG	59.566	54.545	0.00	0.00	43.91	3.35
628	637	0.758123	CCCTCTTCCTCATCCTGAGC	59.242	60.000	0.00	0.00	42.98	4.26
629	638	1.493861	CCTCTTCCTCATCCTGAGCA	58.506	55.000	0.00	0.00	42.98	4.26
630	639	1.413445	CCTCTTCCTCATCCTGAGCAG	59.587	57.143	0.00	0.00	42.98	4.24
631	640	0.829333	TCTTCCTCATCCTGAGCAGC	59.171	55.000	0.00	0.00	42.98	5.25
632	641	0.540454	CTTCCTCATCCTGAGCAGCA	59.460	55.000	0.00	0.00	42.98	4.41
633	642	0.540454	TTCCTCATCCTGAGCAGCAG	59.460	55.000	0.00	0.00	42.98	4.24
643	652	3.897856	AGCAGCAGAGGTGGTCTT	58.102	55.556	0.00	0.00	37.15	3.01
644	653	2.149530	AGCAGCAGAGGTGGTCTTT	58.850	52.632	0.00	0.00	37.15	2.52
645	654	0.475906	AGCAGCAGAGGTGGTCTTTT	59.524	50.000	0.00	0.00	37.15	2.27
646	655	1.133668	AGCAGCAGAGGTGGTCTTTTT	60.134	47.619	0.00	0.00	37.15	1.94
647	656	1.000938	GCAGCAGAGGTGGTCTTTTTG	60.001	52.381	0.00	0.00	30.64	2.44
648	657	1.000938	CAGCAGAGGTGGTCTTTTTGC	60.001	52.381	0.00	0.00	30.64	3.68
649	658	1.032014	GCAGAGGTGGTCTTTTTGCA	58.968	50.000	0.00	0.00	30.64	4.08
650	659	1.000938	GCAGAGGTGGTCTTTTTGCAG	60.001	52.381	0.00	0.00	30.64	4.41
651	660	1.000938	CAGAGGTGGTCTTTTTGCAGC	60.001	52.381	0.00	0.00	30.64	5.25
652	661	0.315251	GAGGTGGTCTTTTTGCAGCC	59.685	55.000	0.00	0.00	0.00	4.85
653	662	0.106015	AGGTGGTCTTTTTGCAGCCT	60.106	50.000	0.00	0.00	0.00	4.58
654	663	0.315251	GGTGGTCTTTTTGCAGCCTC	59.685	55.000	0.00	0.00	0.00	4.70
655	664	0.315251	GTGGTCTTTTTGCAGCCTCC	59.685	55.000	0.00	0.00	0.00	4.30
656	665	0.827507	TGGTCTTTTTGCAGCCTCCC	60.828	55.000	0.00	0.00	0.00	4.30
657	666	0.827507	GGTCTTTTTGCAGCCTCCCA	60.828	55.000	0.00	0.00	0.00	4.37
658	667	0.600057	GTCTTTTTGCAGCCTCCCAG	59.400	55.000	0.00	0.00	0.00	4.45
659	668	0.478072	TCTTTTTGCAGCCTCCCAGA	59.522	50.000	0.00	0.00	0.00	3.86
660	669	1.076024	TCTTTTTGCAGCCTCCCAGAT	59.924	47.619	0.00	0.00	0.00	2.90
661	670	2.308570	TCTTTTTGCAGCCTCCCAGATA	59.691	45.455	0.00	0.00	0.00	1.98
662	671	2.425143	TTTTGCAGCCTCCCAGATAG	57.575	50.000	0.00	0.00	0.00	2.08
663	672	0.107017	TTTGCAGCCTCCCAGATAGC	60.107	55.000	0.00	0.00	0.00	2.97
664	673	0.984961	TTGCAGCCTCCCAGATAGCT	60.985	55.000	0.00	0.00	35.52	3.32
666	675	1.071128	CAGCCTCCCAGATAGCTGC	59.929	63.158	1.39	0.00	45.44	5.25
667	676	1.074623	AGCCTCCCAGATAGCTGCT	60.075	57.895	7.57	7.57	40.91	4.24
668	677	0.189574	AGCCTCCCAGATAGCTGCTA	59.810	55.000	12.40	12.40	40.91	3.49
669	678	1.203288	AGCCTCCCAGATAGCTGCTAT	60.203	52.381	21.44	21.44	40.91	2.97
670	679	1.066286	GCCTCCCAGATAGCTGCTATG	60.066	57.143	25.75	14.23	40.91	2.23
671	680	2.533916	CCTCCCAGATAGCTGCTATGA	58.466	52.381	25.75	15.28	40.91	2.15
672	681	3.106054	CCTCCCAGATAGCTGCTATGAT	58.894	50.000	25.75	11.87	40.91	2.45
673	682	3.132646	CCTCCCAGATAGCTGCTATGATC	59.867	52.174	25.75	14.09	40.91	2.92
674	683	3.102972	TCCCAGATAGCTGCTATGATCC	58.897	50.000	25.75	11.78	40.91	3.36
675	684	3.106054	CCCAGATAGCTGCTATGATCCT	58.894	50.000	25.75	13.78	40.91	3.24
676	685	3.132646	CCCAGATAGCTGCTATGATCCTC	59.867	52.174	25.75	11.69	40.91	3.71
677	686	4.025360	CCAGATAGCTGCTATGATCCTCT	58.975	47.826	25.75	13.73	40.91	3.69
678	687	4.098349	CCAGATAGCTGCTATGATCCTCTC	59.902	50.000	25.75	10.30	40.91	3.20
679	688	4.098349	CAGATAGCTGCTATGATCCTCTCC	59.902	50.000	25.75	8.71	34.95	3.71
680	689	2.395336	AGCTGCTATGATCCTCTCCA	57.605	50.000	0.00	0.00	0.00	3.86
681	690	1.969923	AGCTGCTATGATCCTCTCCAC	59.030	52.381	0.00	0.00	0.00	4.02
682	691	1.336702	GCTGCTATGATCCTCTCCACG	60.337	57.143	0.00	0.00	0.00	4.94
683	692	0.676184	TGCTATGATCCTCTCCACGC	59.324	55.000	0.00	0.00	0.00	5.34
684	693	0.387878	GCTATGATCCTCTCCACGCG	60.388	60.000	3.53	3.53	0.00	6.01
685	694	0.387878	CTATGATCCTCTCCACGCGC	60.388	60.000	5.73	0.00	0.00	6.86
686	695	0.823769	TATGATCCTCTCCACGCGCT	60.824	55.000	5.73	0.00	0.00	5.92
687	696	2.026879	GATCCTCTCCACGCGCTC	59.973	66.667	5.73	0.00	0.00	5.03
688	697	2.441164	ATCCTCTCCACGCGCTCT	60.441	61.111	5.73	0.00	0.00	4.09
689	698	2.400896	GATCCTCTCCACGCGCTCTC	62.401	65.000	5.73	0.00	0.00	3.20
690	699	2.902423	ATCCTCTCCACGCGCTCTCT	62.902	60.000	5.73	0.00	0.00	3.10
691	700	2.705821	CCTCTCCACGCGCTCTCTT	61.706	63.158	5.73	0.00	0.00	2.85
692	701	1.515952	CTCTCCACGCGCTCTCTTG	60.516	63.158	5.73	0.00	0.00	3.02
693	702	3.184683	CTCCACGCGCTCTCTTGC	61.185	66.667	5.73	0.00	0.00	4.01
694	703	3.921767	CTCCACGCGCTCTCTTGCA	62.922	63.158	5.73	0.00	0.00	4.08
695	704	3.782244	CCACGCGCTCTCTTGCAC	61.782	66.667	5.73	0.00	0.00	4.57
696	705	2.736236	CACGCGCTCTCTTGCACT	60.736	61.111	5.73	0.00	0.00	4.40
697	706	2.029666	ACGCGCTCTCTTGCACTT	59.970	55.556	5.73	0.00	0.00	3.16
698	707	2.024319	ACGCGCTCTCTTGCACTTC	61.024	57.895	5.73	0.00	0.00	3.01
699	708	2.734673	CGCGCTCTCTTGCACTTCC	61.735	63.158	5.56	0.00	0.00	3.46
700	709	1.375268	GCGCTCTCTTGCACTTCCT	60.375	57.895	0.00	0.00	0.00	3.36
701	710	0.952984	GCGCTCTCTTGCACTTCCTT	60.953	55.000	0.00	0.00	0.00	3.36
702	711	1.517242	CGCTCTCTTGCACTTCCTTT	58.483	50.000	0.00	0.00	0.00	3.11
703	712	1.196354	CGCTCTCTTGCACTTCCTTTG	59.804	52.381	0.00	0.00	0.00	2.77
704	713	1.068679	GCTCTCTTGCACTTCCTTTGC	60.069	52.381	0.00	0.00	40.63	3.68
709	718	2.417978	TGCACTTCCTTTGCACAGG	58.582	52.632	13.02	13.02	45.06	4.00
710	719	0.106769	TGCACTTCCTTTGCACAGGA	60.107	50.000	17.81	17.81	45.06	3.86
711	720	1.251251	GCACTTCCTTTGCACAGGAT	58.749	50.000	22.01	5.80	42.89	3.24
712	721	1.200948	GCACTTCCTTTGCACAGGATC	59.799	52.381	22.01	8.48	42.89	3.36
713	722	2.787994	CACTTCCTTTGCACAGGATCT	58.212	47.619	22.01	7.64	42.89	2.75
714	723	3.152341	CACTTCCTTTGCACAGGATCTT	58.848	45.455	22.01	6.98	42.89	2.40
715	724	3.571401	CACTTCCTTTGCACAGGATCTTT	59.429	43.478	22.01	4.56	42.89	2.52
716	725	3.823304	ACTTCCTTTGCACAGGATCTTTC	59.177	43.478	22.01	0.00	42.89	2.62
717	726	3.507162	TCCTTTGCACAGGATCTTTCA	57.493	42.857	17.81	0.00	38.11	2.69
718	727	3.415212	TCCTTTGCACAGGATCTTTCAG	58.585	45.455	17.81	0.00	38.11	3.02
719	728	3.072915	TCCTTTGCACAGGATCTTTCAGA	59.927	43.478	17.81	0.00	38.11	3.27
720	729	3.439476	CCTTTGCACAGGATCTTTCAGAG	59.561	47.826	14.02	0.00	35.71	3.35
721	730	4.321718	CTTTGCACAGGATCTTTCAGAGA	58.678	43.478	0.00	0.00	39.13	3.10
723	732	4.564782	TGCACAGGATCTTTCAGAGATT	57.435	40.909	0.00	0.00	45.17	2.40
724	733	4.259356	TGCACAGGATCTTTCAGAGATTG	58.741	43.478	0.00	0.00	45.17	2.67
725	734	3.065095	GCACAGGATCTTTCAGAGATTGC	59.935	47.826	0.00	0.00	45.17	3.56
726	735	4.259356	CACAGGATCTTTCAGAGATTGCA	58.741	43.478	0.00	0.00	45.17	4.08
727	736	4.333095	CACAGGATCTTTCAGAGATTGCAG	59.667	45.833	0.00	0.00	45.17	4.41
728	737	4.224594	ACAGGATCTTTCAGAGATTGCAGA	59.775	41.667	0.00	0.00	45.17	4.26
729	738	5.183969	CAGGATCTTTCAGAGATTGCAGAA	58.816	41.667	0.00	0.00	45.17	3.02
730	739	5.646793	CAGGATCTTTCAGAGATTGCAGAAA	59.353	40.000	0.00	0.00	45.17	2.52
731	740	5.647225	AGGATCTTTCAGAGATTGCAGAAAC	59.353	40.000	0.00	0.00	45.17	2.78
732	741	5.163673	GGATCTTTCAGAGATTGCAGAAACC	60.164	44.000	0.00	0.00	45.17	3.27
733	742	4.978099	TCTTTCAGAGATTGCAGAAACCT	58.022	39.130	0.00	0.00	0.00	3.50
734	743	4.999950	TCTTTCAGAGATTGCAGAAACCTC	59.000	41.667	0.00	0.00	0.00	3.85
735	744	3.340814	TCAGAGATTGCAGAAACCTCC	57.659	47.619	0.00	0.00	0.00	4.30
736	745	2.909006	TCAGAGATTGCAGAAACCTCCT	59.091	45.455	0.00	0.00	0.00	3.69
737	746	4.096681	TCAGAGATTGCAGAAACCTCCTA	58.903	43.478	0.00	0.00	0.00	2.94
738	747	4.718774	TCAGAGATTGCAGAAACCTCCTAT	59.281	41.667	0.00	0.00	0.00	2.57
739	748	5.055812	CAGAGATTGCAGAAACCTCCTATC	58.944	45.833	0.00	0.00	0.00	2.08
740	749	4.718774	AGAGATTGCAGAAACCTCCTATCA	59.281	41.667	0.00	0.00	0.00	2.15
741	750	5.190528	AGAGATTGCAGAAACCTCCTATCAA	59.809	40.000	0.00	0.00	0.00	2.57
742	751	5.189180	AGATTGCAGAAACCTCCTATCAAC	58.811	41.667	0.00	0.00	0.00	3.18
743	752	4.640771	TTGCAGAAACCTCCTATCAACT	57.359	40.909	0.00	0.00	0.00	3.16
744	753	4.640771	TGCAGAAACCTCCTATCAACTT	57.359	40.909	0.00	0.00	0.00	2.66
745	754	4.579869	TGCAGAAACCTCCTATCAACTTC	58.420	43.478	0.00	0.00	0.00	3.01
746	755	4.041567	TGCAGAAACCTCCTATCAACTTCA	59.958	41.667	0.00	0.00	0.00	3.02
747	756	4.633565	GCAGAAACCTCCTATCAACTTCAG	59.366	45.833	0.00	0.00	0.00	3.02
748	757	5.569630	GCAGAAACCTCCTATCAACTTCAGA	60.570	44.000	0.00	0.00	0.00	3.27
749	758	6.467677	CAGAAACCTCCTATCAACTTCAGAA	58.532	40.000	0.00	0.00	0.00	3.02
750	759	7.108847	CAGAAACCTCCTATCAACTTCAGAAT	58.891	38.462	0.00	0.00	0.00	2.40
751	760	7.279758	CAGAAACCTCCTATCAACTTCAGAATC	59.720	40.741	0.00	0.00	0.00	2.52
752	761	6.627087	AACCTCCTATCAACTTCAGAATCA	57.373	37.500	0.00	0.00	0.00	2.57
753	762	5.983540	ACCTCCTATCAACTTCAGAATCAC	58.016	41.667	0.00	0.00	0.00	3.06
754	763	5.104735	ACCTCCTATCAACTTCAGAATCACC	60.105	44.000	0.00	0.00	0.00	4.02
755	764	5.104776	CCTCCTATCAACTTCAGAATCACCA	60.105	44.000	0.00	0.00	0.00	4.17
771	780	2.869801	TCACCAGCAACTTTAGTTCACG	59.130	45.455	0.00	0.00	35.83	4.35
772	781	2.612212	CACCAGCAACTTTAGTTCACGT	59.388	45.455	0.00	0.00	35.83	4.49
785	794	0.736053	TTCACGTGAGGTTGGCAAAC	59.264	50.000	19.11	7.31	35.40	2.93
786	795	0.393132	TCACGTGAGGTTGGCAAACA	60.393	50.000	18.93	8.37	38.10	2.83
787	796	0.667993	CACGTGAGGTTGGCAAACAT	59.332	50.000	18.93	0.00	38.10	2.71
788	797	0.667993	ACGTGAGGTTGGCAAACATG	59.332	50.000	18.93	16.93	38.10	3.21
789	798	0.950836	CGTGAGGTTGGCAAACATGA	59.049	50.000	18.93	0.00	38.10	3.07
791	800	2.746904	CGTGAGGTTGGCAAACATGATA	59.253	45.455	18.93	0.00	38.10	2.15
792	801	3.378112	CGTGAGGTTGGCAAACATGATAT	59.622	43.478	18.93	0.00	38.10	1.63
793	802	4.142403	CGTGAGGTTGGCAAACATGATATT	60.142	41.667	18.93	0.00	38.10	1.28
794	803	5.622007	CGTGAGGTTGGCAAACATGATATTT	60.622	40.000	18.93	0.00	38.10	1.40
795	804	6.165577	GTGAGGTTGGCAAACATGATATTTT	58.834	36.000	18.93	0.00	38.10	1.82
796	805	6.650390	GTGAGGTTGGCAAACATGATATTTTT	59.350	34.615	18.93	0.00	38.10	1.94
865	883	4.582701	AGTTGCCATGAAAAATGTTCGA	57.417	36.364	0.00	0.00	0.00	3.71
884	902	7.592938	TGTTCGAAATGACATGCTTAAAATCT	58.407	30.769	0.00	0.00	0.00	2.40
887	905	7.466805	TCGAAATGACATGCTTAAAATCTGAG	58.533	34.615	0.00	0.00	0.00	3.35
909	933	3.211865	GGGATTTATCGGGTCCAAACTC	58.788	50.000	0.00	0.00	33.62	3.01
939	963	7.069826	ACACGAATCCATGATTTCCCATTTATT	59.930	33.333	0.00	0.00	31.89	1.40
976	1002	4.773117	GACGCCGTCACTCCCGTC	62.773	72.222	13.23	0.00	42.39	4.79
1474	1507	4.785453	CCCTTCTGGCCACCTCGC	62.785	72.222	0.00	0.00	0.00	5.03
1491	1524	1.963338	GCTGATGCGGTCCTATGCC	60.963	63.158	0.00	0.00	0.00	4.40
1549	1582	2.548057	GACGAAATGCTTGTCAAGGACA	59.452	45.455	14.40	5.15	41.09	4.02
1581	1614	3.368236	GGAACGTTCTCATCACTTGCTAC	59.632	47.826	26.32	2.20	0.00	3.58
1605	1638	3.243134	CGAGGAATAAGAGGACGAAGGAC	60.243	52.174	0.00	0.00	0.00	3.85
1608	1641	3.447944	GGAATAAGAGGACGAAGGACACT	59.552	47.826	0.00	0.00	0.00	3.55
1677	1710	2.286872	GATGAGGTGACCTGCATTCTG	58.713	52.381	9.89	0.00	31.76	3.02
1737	1770	2.491825	CGGGGAGAAGATCTGGGAGTAT	60.492	54.545	0.00	0.00	0.00	2.12
1922	1955	1.974236	CTTCGGGGAGGATGCTATCTT	59.026	52.381	0.00	0.00	0.00	2.40
2127	2160	0.961019	GTGCTGGGTTGCTTGATGAA	59.039	50.000	0.00	0.00	0.00	2.57
2197	2230	3.478857	TTTGGCGAACTCTTCTTGGTA	57.521	42.857	0.00	0.00	0.00	3.25
2208	2241	0.322098	TTCTTGGTACATGCCGGGTG	60.322	55.000	2.18	0.00	39.30	4.61
2236	2269	4.332268	GTCATGTTGATCTTGGAGAGAAGC	59.668	45.833	0.00	0.00	38.06	3.86
2241	2274	4.669206	TGATCTTGGAGAGAAGCTCATC	57.331	45.455	0.00	0.00	45.81	2.92
2289	2322	5.102953	AGCAAGCTGGTGATTATGTTCTA	57.897	39.130	0.00	0.00	0.00	2.10
2376	2409	5.117406	AGGAGAATGGAATCCAAACTACC	57.883	43.478	5.89	11.37	36.95	3.18
2391	2424	2.129555	CTACCCCTGGCTGCACAACT	62.130	60.000	0.50	0.00	0.00	3.16
2637	2670	1.556564	CACAGCGTAGACCAATACGG	58.443	55.000	8.20	0.00	46.66	4.02
2697	2730	4.759516	TTTCACGAAGGTATTTTCTGGC	57.240	40.909	0.00	0.00	0.00	4.85
2873	2927	5.798125	TTTGCAACCTTGATACCAAATGA	57.202	34.783	0.00	0.00	0.00	2.57
2902	2956	4.556592	TGACCAGATGTGATGTGATTCA	57.443	40.909	0.00	0.00	0.00	2.57
2909	2963	6.458342	CCAGATGTGATGTGATTCAGTGATTG	60.458	42.308	0.00	0.00	0.00	2.67
2910	2964	4.690184	TGTGATGTGATTCAGTGATTGC	57.310	40.909	0.00	0.00	0.00	3.56
2911	2965	3.441222	TGTGATGTGATTCAGTGATTGCC	59.559	43.478	0.00	0.00	0.00	4.52
2926	2980	4.823989	GTGATTGCCAGGCATTCTACTATT	59.176	41.667	28.53	3.70	38.98	1.73
2936	2990	6.989169	CAGGCATTCTACTATTAGGGCATATC	59.011	42.308	0.00	0.00	0.00	1.63
2953	3007	2.128771	ATCGACCCAATTCCACAAGG	57.871	50.000	0.00	0.00	0.00	3.61
2997	3052	1.270465	TGGACTGCAGTCACATCTGTG	60.270	52.381	39.71	3.90	46.47	3.66
3155	3210	2.966050	AGCGGAACAGAAAGAGATGAC	58.034	47.619	0.00	0.00	0.00	3.06
3160	3215	4.508662	GGAACAGAAAGAGATGACGGATT	58.491	43.478	0.00	0.00	0.00	3.01
3164	3219	3.620374	CAGAAAGAGATGACGGATTGTGG	59.380	47.826	0.00	0.00	0.00	4.17
3168	3223	0.745845	AGATGACGGATTGTGGCAGC	60.746	55.000	0.00	0.00	0.00	5.25
3214	3269	4.150098	GGTTTCGTAGACAAGCACTACAAG	59.850	45.833	0.00	0.00	39.82	3.16
3235	3336	7.881142	ACAAGCACAAACAGTAAGCATAATAA	58.119	30.769	0.00	0.00	0.00	1.40
3249	3350	9.831737	GTAAGCATAATAAAGCCAATATCTGTG	57.168	33.333	0.00	0.00	0.00	3.66
3254	3355	9.831737	CATAATAAAGCCAATATCTGTGTAAGC	57.168	33.333	0.00	0.00	0.00	3.09
3262	3363	6.294473	CCAATATCTGTGTAAGCCTGAGAAT	58.706	40.000	0.00	0.00	0.00	2.40
3274	3375	4.916183	AGCCTGAGAATTTTGACTAAGCT	58.084	39.130	0.00	0.00	0.00	3.74
3297	3398	2.416431	GGCTATTTCAGTTTGGCAGCAG	60.416	50.000	0.00	0.00	0.00	4.24
3335	3440	5.091552	TCAAGTCAGTAAACCTCCATACCT	58.908	41.667	0.00	0.00	0.00	3.08
3470	3578	7.201732	CCCCATAAGTAATACTTTGAACAGCAG	60.202	40.741	11.22	0.00	39.51	4.24
3505	3645	5.204409	TCTGCATTTTCTTTGACAGCAAT	57.796	34.783	0.00	0.00	33.25	3.56
3506	3646	5.603596	TCTGCATTTTCTTTGACAGCAATT	58.396	33.333	0.00	0.00	33.25	2.32
3507	3647	5.693104	TCTGCATTTTCTTTGACAGCAATTC	59.307	36.000	0.00	0.00	33.25	2.17
3508	3648	5.603596	TGCATTTTCTTTGACAGCAATTCT	58.396	33.333	0.00	0.00	33.25	2.40
3630	3942	2.426024	CAGGAGATGCATTTTCCACTGG	59.574	50.000	24.71	12.57	33.32	4.00
3635	3947	2.284754	TGCATTTTCCACTGGCACTA	57.715	45.000	0.00	0.00	0.00	2.74
3648	3960	7.546358	TCCACTGGCACTATTTATTTTTCATG	58.454	34.615	0.00	0.00	0.00	3.07
3679	3991	4.703897	TGCCTGCAGTAAACTACATATCC	58.296	43.478	13.81	0.00	0.00	2.59
3732	4045	1.140134	TCTTTACCCCCTGCCTGCTT	61.140	55.000	0.00	0.00	0.00	3.91

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability
0	1	5.900425	ACATGCATGGCAATTAAATACGAA	58.100	33.333	29.41	0.00	43.62	3.85
1	2	5.512753	ACATGCATGGCAATTAAATACGA	57.487	34.783	29.41	0.00	43.62	3.43
2	3	5.747675	TGAACATGCATGGCAATTAAATACG	59.252	36.000	29.41	0.42	43.62	3.06
10	11	0.177141	GGCTGAACATGCATGGCAAT	59.823	50.000	29.41	13.24	43.62	3.56
32	33	7.088589	AGCTTCGTAGTCATTATTTGCATTT	57.911	32.000	0.00	0.00	0.00	2.32
33	34	6.683974	AGCTTCGTAGTCATTATTTGCATT	57.316	33.333	0.00	0.00	0.00	3.56
34	35	6.986817	ACTAGCTTCGTAGTCATTATTTGCAT	59.013	34.615	0.00	0.00	0.00	3.96
42	43	6.269315	CAGATGAACTAGCTTCGTAGTCATT	58.731	40.000	0.00	0.00	31.73	2.57
50	51	2.100584	AGGAGCAGATGAACTAGCTTCG	59.899	50.000	0.00	0.00	35.20	3.79
51	52	3.384467	AGAGGAGCAGATGAACTAGCTTC	59.616	47.826	0.00	0.00	34.79	3.86
55	56	4.870363	GCTAAGAGGAGCAGATGAACTAG	58.130	47.826	0.00	0.00	42.36	2.57
163	171	9.912634	CTTGATTTTGTTTTATGGATGTGTACT	57.087	29.630	0.00	0.00	0.00	2.73
172	180	4.323336	CGACGGCTTGATTTTGTTTTATGG	59.677	41.667	0.00	0.00	0.00	2.74
185	193	1.511305	GAGGATGACGACGGCTTGA	59.489	57.895	0.65	0.00	0.00	3.02
189	197	1.079405	TTTGGAGGATGACGACGGC	60.079	57.895	0.00	0.00	0.00	5.68
214	222	7.860872	ACCATGATTTCGAGAAAGTAAAAACAC	59.139	33.333	0.00	0.00	33.32	3.32
227	236	0.652592	GCCGACACCATGATTTCGAG	59.347	55.000	0.00	0.00	33.20	4.04
244	253	6.528774	CCGTAAAGTTTGTGGTTATTTATGCC	59.471	38.462	0.00	0.00	0.00	4.40
245	254	7.306953	TCCGTAAAGTTTGTGGTTATTTATGC	58.693	34.615	0.00	0.00	0.00	3.14
282	291	5.745294	CCATGCTTAAAATCTGAACATTCGG	59.255	40.000	0.00	0.00	34.85	4.30
287	296	5.465532	TTGCCATGCTTAAAATCTGAACA	57.534	34.783	0.00	0.00	0.00	3.18
312	321	4.668289	ACTAAAGTTGCCACGAAAAAGTG	58.332	39.130	0.00	0.00	41.53	3.16
313	322	4.976224	ACTAAAGTTGCCACGAAAAAGT	57.024	36.364	0.00	0.00	0.00	2.66
314	323	6.641176	AAAACTAAAGTTGCCACGAAAAAG	57.359	33.333	0.00	0.00	38.44	2.27
338	347	6.859420	GCTGATGCCCTTTTCTTTTAAAAA	57.141	33.333	1.66	0.00	0.00	1.94
354	363	3.721370	ATGGAACCGGGGCTGATGC	62.721	63.158	6.32	0.00	38.76	3.91
355	364	0.684153	AAATGGAACCGGGGCTGATG	60.684	55.000	6.32	0.00	0.00	3.07
356	365	0.041090	AAAATGGAACCGGGGCTGAT	59.959	50.000	6.32	0.00	0.00	2.90
357	366	0.610785	GAAAATGGAACCGGGGCTGA	60.611	55.000	6.32	0.00	0.00	4.26
358	367	0.897863	TGAAAATGGAACCGGGGCTG	60.898	55.000	6.32	0.00	0.00	4.85
359	368	0.041090	ATGAAAATGGAACCGGGGCT	59.959	50.000	6.32	0.00	0.00	5.19
360	369	0.459899	GATGAAAATGGAACCGGGGC	59.540	55.000	6.32	0.00	0.00	5.80
361	370	1.750778	CTGATGAAAATGGAACCGGGG	59.249	52.381	6.32	0.00	0.00	5.73
362	371	2.722094	TCTGATGAAAATGGAACCGGG	58.278	47.619	6.32	0.00	0.00	5.73
363	372	4.782019	TTTCTGATGAAAATGGAACCGG	57.218	40.909	0.00	0.00	39.02	5.28
372	381	5.105716	TCGGTGGTTTGTTTTCTGATGAAAA	60.106	36.000	0.49	0.49	46.27	2.29
373	382	4.399618	TCGGTGGTTTGTTTTCTGATGAAA	59.600	37.500	0.00	0.00	40.08	2.69
374	383	3.948473	TCGGTGGTTTGTTTTCTGATGAA	59.052	39.130	0.00	0.00	0.00	2.57
375	384	3.546724	TCGGTGGTTTGTTTTCTGATGA	58.453	40.909	0.00	0.00	0.00	2.92
376	385	3.315191	ACTCGGTGGTTTGTTTTCTGATG	59.685	43.478	0.00	0.00	0.00	3.07
377	386	3.551846	ACTCGGTGGTTTGTTTTCTGAT	58.448	40.909	0.00	0.00	0.00	2.90
378	387	2.993937	ACTCGGTGGTTTGTTTTCTGA	58.006	42.857	0.00	0.00	0.00	3.27
379	388	3.623960	TGTACTCGGTGGTTTGTTTTCTG	59.376	43.478	0.00	0.00	0.00	3.02
380	389	3.876341	TGTACTCGGTGGTTTGTTTTCT	58.124	40.909	0.00	0.00	0.00	2.52
381	390	4.319984	GGATGTACTCGGTGGTTTGTTTTC	60.320	45.833	0.00	0.00	0.00	2.29
382	391	3.566742	GGATGTACTCGGTGGTTTGTTTT	59.433	43.478	0.00	0.00	0.00	2.43
383	392	3.143728	GGATGTACTCGGTGGTTTGTTT	58.856	45.455	0.00	0.00	0.00	2.83
384	393	2.370849	AGGATGTACTCGGTGGTTTGTT	59.629	45.455	0.00	0.00	0.00	2.83
385	394	1.975680	AGGATGTACTCGGTGGTTTGT	59.024	47.619	0.00	0.00	0.00	2.83
386	395	2.762535	AGGATGTACTCGGTGGTTTG	57.237	50.000	0.00	0.00	0.00	2.93
387	396	5.431179	AATAAGGATGTACTCGGTGGTTT	57.569	39.130	0.00	0.00	0.00	3.27
388	397	5.422970	TGTAATAAGGATGTACTCGGTGGTT	59.577	40.000	0.00	0.00	0.00	3.67
389	398	4.957954	TGTAATAAGGATGTACTCGGTGGT	59.042	41.667	0.00	0.00	0.00	4.16
390	399	5.524971	TGTAATAAGGATGTACTCGGTGG	57.475	43.478	0.00	0.00	0.00	4.61
391	400	4.982916	GCTGTAATAAGGATGTACTCGGTG	59.017	45.833	0.00	0.00	0.00	4.94
392	401	4.038883	GGCTGTAATAAGGATGTACTCGGT	59.961	45.833	0.00	0.00	0.00	4.69
393	402	4.281182	AGGCTGTAATAAGGATGTACTCGG	59.719	45.833	0.00	0.00	0.00	4.63
394	403	5.455056	AGGCTGTAATAAGGATGTACTCG	57.545	43.478	0.00	0.00	0.00	4.18
395	404	6.380190	CGTAGGCTGTAATAAGGATGTACTC	58.620	44.000	0.00	0.00	0.00	2.59
396	405	5.243283	CCGTAGGCTGTAATAAGGATGTACT	59.757	44.000	0.00	0.00	46.14	2.73
397	406	5.467705	CCGTAGGCTGTAATAAGGATGTAC	58.532	45.833	0.00	0.00	46.14	2.90
398	407	5.717078	CCGTAGGCTGTAATAAGGATGTA	57.283	43.478	0.00	0.00	46.14	2.29
399	408	4.602340	CCGTAGGCTGTAATAAGGATGT	57.398	45.455	0.00	0.00	46.14	3.06
415	424	8.480643	AGAGTTTTATGTTTCTGAATCCGTAG	57.519	34.615	0.00	0.00	0.00	3.51
416	425	9.362539	GTAGAGTTTTATGTTTCTGAATCCGTA	57.637	33.333	0.00	0.00	0.00	4.02
417	426	8.095169	AGTAGAGTTTTATGTTTCTGAATCCGT	58.905	33.333	0.00	0.00	0.00	4.69
418	427	8.480643	AGTAGAGTTTTATGTTTCTGAATCCG	57.519	34.615	0.00	0.00	0.00	4.18
422	431	9.621629	TGGAAAGTAGAGTTTTATGTTTCTGAA	57.378	29.630	0.00	0.00	0.00	3.02
423	432	9.793259	ATGGAAAGTAGAGTTTTATGTTTCTGA	57.207	29.630	0.00	0.00	0.00	3.27
433	442	9.793259	TGATTCTGTTATGGAAAGTAGAGTTTT	57.207	29.630	0.00	0.00	0.00	2.43
434	443	9.442047	CTGATTCTGTTATGGAAAGTAGAGTTT	57.558	33.333	0.00	0.00	0.00	2.66
435	444	8.598041	ACTGATTCTGTTATGGAAAGTAGAGTT	58.402	33.333	0.00	0.00	0.00	3.01
436	445	8.140112	ACTGATTCTGTTATGGAAAGTAGAGT	57.860	34.615	0.00	0.00	0.00	3.24
437	446	8.474025	AGACTGATTCTGTTATGGAAAGTAGAG	58.526	37.037	0.00	0.00	31.12	2.43
438	447	8.367660	AGACTGATTCTGTTATGGAAAGTAGA	57.632	34.615	0.00	0.00	31.12	2.59
442	451	9.482627	GGTATAGACTGATTCTGTTATGGAAAG	57.517	37.037	0.00	0.00	35.55	2.62
443	452	8.988060	TGGTATAGACTGATTCTGTTATGGAAA	58.012	33.333	0.00	0.00	35.55	3.13
444	453	8.547481	TGGTATAGACTGATTCTGTTATGGAA	57.453	34.615	0.00	0.00	35.55	3.53
445	454	8.547481	TTGGTATAGACTGATTCTGTTATGGA	57.453	34.615	0.00	0.00	35.55	3.41
446	455	7.386299	GCTTGGTATAGACTGATTCTGTTATGG	59.614	40.741	0.00	0.00	35.55	2.74
447	456	7.115520	CGCTTGGTATAGACTGATTCTGTTATG	59.884	40.741	0.00	0.00	35.55	1.90
448	457	7.148641	CGCTTGGTATAGACTGATTCTGTTAT	58.851	38.462	0.00	2.14	35.55	1.89
449	458	6.096423	ACGCTTGGTATAGACTGATTCTGTTA	59.904	38.462	0.00	0.00	35.55	2.41
450	459	5.105310	ACGCTTGGTATAGACTGATTCTGTT	60.105	40.000	0.00	0.00	35.55	3.16
451	460	4.402793	ACGCTTGGTATAGACTGATTCTGT	59.597	41.667	0.00	0.00	35.55	3.41
452	461	4.938080	ACGCTTGGTATAGACTGATTCTG	58.062	43.478	0.00	0.00	35.55	3.02
453	462	6.239064	CCTTACGCTTGGTATAGACTGATTCT	60.239	42.308	0.00	0.00	38.51	2.40
454	463	5.921408	CCTTACGCTTGGTATAGACTGATTC	59.079	44.000	0.00	0.00	0.00	2.52
455	464	5.739358	GCCTTACGCTTGGTATAGACTGATT	60.739	44.000	0.00	0.00	0.00	2.57
456	465	4.262079	GCCTTACGCTTGGTATAGACTGAT	60.262	45.833	0.00	0.00	0.00	2.90
457	466	3.067742	GCCTTACGCTTGGTATAGACTGA	59.932	47.826	0.00	0.00	0.00	3.41
458	467	3.181479	TGCCTTACGCTTGGTATAGACTG	60.181	47.826	0.00	0.00	38.78	3.51
459	468	3.028850	TGCCTTACGCTTGGTATAGACT	58.971	45.455	0.00	0.00	38.78	3.24
460	469	3.447918	TGCCTTACGCTTGGTATAGAC	57.552	47.619	0.00	0.00	38.78	2.59
461	470	4.377021	CAATGCCTTACGCTTGGTATAGA	58.623	43.478	0.00	0.00	38.78	1.98
462	471	3.498397	CCAATGCCTTACGCTTGGTATAG	59.502	47.826	0.00	0.00	39.23	1.31
463	472	3.472652	CCAATGCCTTACGCTTGGTATA	58.527	45.455	0.00	0.00	39.23	1.47
464	473	2.297701	CCAATGCCTTACGCTTGGTAT	58.702	47.619	0.00	0.00	39.23	2.73
465	474	1.680555	CCCAATGCCTTACGCTTGGTA	60.681	52.381	10.15	0.00	40.94	3.25
466	475	0.965363	CCCAATGCCTTACGCTTGGT	60.965	55.000	10.15	0.00	40.94	3.67
467	476	0.679640	TCCCAATGCCTTACGCTTGG	60.680	55.000	0.00	0.00	41.60	3.61
468	477	1.173043	TTCCCAATGCCTTACGCTTG	58.827	50.000	0.00	0.00	38.78	4.01
469	478	1.917872	TTTCCCAATGCCTTACGCTT	58.082	45.000	0.00	0.00	38.78	4.68
470	479	1.917872	TTTTCCCAATGCCTTACGCT	58.082	45.000	0.00	0.00	38.78	5.07
471	480	2.029380	AGTTTTTCCCAATGCCTTACGC	60.029	45.455	0.00	0.00	38.31	4.42
472	481	3.934457	AGTTTTTCCCAATGCCTTACG	57.066	42.857	0.00	0.00	0.00	3.18
473	482	5.336451	CCAGTAGTTTTTCCCAATGCCTTAC	60.336	44.000	0.00	0.00	0.00	2.34
474	483	4.770010	CCAGTAGTTTTTCCCAATGCCTTA	59.230	41.667	0.00	0.00	0.00	2.69
475	484	3.578282	CCAGTAGTTTTTCCCAATGCCTT	59.422	43.478	0.00	0.00	0.00	4.35
476	485	3.165071	CCAGTAGTTTTTCCCAATGCCT	58.835	45.455	0.00	0.00	0.00	4.75
477	486	2.353704	GCCAGTAGTTTTTCCCAATGCC	60.354	50.000	0.00	0.00	0.00	4.40
478	487	2.298729	TGCCAGTAGTTTTTCCCAATGC	59.701	45.455	0.00	0.00	0.00	3.56
479	488	3.320541	TGTGCCAGTAGTTTTTCCCAATG	59.679	43.478	0.00	0.00	0.00	2.82
480	489	3.571590	TGTGCCAGTAGTTTTTCCCAAT	58.428	40.909	0.00	0.00	0.00	3.16
481	490	3.019799	TGTGCCAGTAGTTTTTCCCAA	57.980	42.857	0.00	0.00	0.00	4.12
482	491	2.691011	GTTGTGCCAGTAGTTTTTCCCA	59.309	45.455	0.00	0.00	0.00	4.37
483	492	2.691011	TGTTGTGCCAGTAGTTTTTCCC	59.309	45.455	0.00	0.00	0.00	3.97
484	493	3.490249	GGTGTTGTGCCAGTAGTTTTTCC	60.490	47.826	0.00	0.00	0.00	3.13
485	494	3.129638	TGGTGTTGTGCCAGTAGTTTTTC	59.870	43.478	0.00	0.00	0.00	2.29
486	495	3.093057	TGGTGTTGTGCCAGTAGTTTTT	58.907	40.909	0.00	0.00	0.00	1.94
487	496	2.425668	GTGGTGTTGTGCCAGTAGTTTT	59.574	45.455	0.00	0.00	36.57	2.43
488	497	2.021457	GTGGTGTTGTGCCAGTAGTTT	58.979	47.619	0.00	0.00	36.57	2.66
489	498	1.675552	GTGGTGTTGTGCCAGTAGTT	58.324	50.000	0.00	0.00	36.57	2.24
490	499	0.179029	GGTGGTGTTGTGCCAGTAGT	60.179	55.000	0.00	0.00	36.57	2.73
491	500	0.889186	GGGTGGTGTTGTGCCAGTAG	60.889	60.000	0.00	0.00	36.57	2.57
492	501	1.149627	GGGTGGTGTTGTGCCAGTA	59.850	57.895	0.00	0.00	36.57	2.74
493	502	2.123897	GGGTGGTGTTGTGCCAGT	60.124	61.111	0.00	0.00	36.57	4.00
494	503	1.326213	TTTGGGTGGTGTTGTGCCAG	61.326	55.000	0.00	0.00	36.57	4.85
495	504	0.904865	TTTTGGGTGGTGTTGTGCCA	60.905	50.000	0.00	0.00	0.00	4.92
496	505	0.179086	CTTTTGGGTGGTGTTGTGCC	60.179	55.000	0.00	0.00	0.00	5.01
497	506	0.179086	CCTTTTGGGTGGTGTTGTGC	60.179	55.000	0.00	0.00	35.46	4.57
498	507	1.479709	TCCTTTTGGGTGGTGTTGTG	58.520	50.000	0.00	0.00	40.87	3.33
499	508	2.107366	CTTCCTTTTGGGTGGTGTTGT	58.893	47.619	0.00	0.00	40.87	3.32
500	509	1.412343	CCTTCCTTTTGGGTGGTGTTG	59.588	52.381	0.00	0.00	40.87	3.33
501	510	1.007842	ACCTTCCTTTTGGGTGGTGTT	59.992	47.619	0.00	0.00	41.44	3.32
502	511	0.634465	ACCTTCCTTTTGGGTGGTGT	59.366	50.000	0.00	0.00	41.44	4.16
503	512	3.531821	ACCTTCCTTTTGGGTGGTG	57.468	52.632	0.00	0.00	41.44	4.17
504	513	3.531821	CACCTTCCTTTTGGGTGGT	57.468	52.632	0.00	0.00	44.63	4.16
507	516	1.850345	TCTGTCACCTTCCTTTTGGGT	59.150	47.619	0.00	0.00	40.87	4.51
508	517	2.656947	TCTGTCACCTTCCTTTTGGG	57.343	50.000	0.00	0.00	40.87	4.12
509	518	3.555966	ACTTCTGTCACCTTCCTTTTGG	58.444	45.455	0.00	0.00	42.21	3.28
510	519	5.997746	TGATACTTCTGTCACCTTCCTTTTG	59.002	40.000	0.00	0.00	0.00	2.44
511	520	6.187727	TGATACTTCTGTCACCTTCCTTTT	57.812	37.500	0.00	0.00	0.00	2.27
512	521	5.825593	TGATACTTCTGTCACCTTCCTTT	57.174	39.130	0.00	0.00	0.00	3.11
513	522	5.104735	GGATGATACTTCTGTCACCTTCCTT	60.105	44.000	0.00	0.00	0.00	3.36
514	523	4.407296	GGATGATACTTCTGTCACCTTCCT	59.593	45.833	0.00	0.00	0.00	3.36
515	524	4.443598	GGGATGATACTTCTGTCACCTTCC	60.444	50.000	0.00	0.00	0.00	3.46
516	525	4.407296	AGGGATGATACTTCTGTCACCTTC	59.593	45.833	0.00	0.00	0.00	3.46
517	526	4.366267	AGGGATGATACTTCTGTCACCTT	58.634	43.478	0.00	0.00	0.00	3.50
518	527	3.964031	GAGGGATGATACTTCTGTCACCT	59.036	47.826	0.00	0.00	0.00	4.00
519	528	3.070302	GGAGGGATGATACTTCTGTCACC	59.930	52.174	0.00	0.00	0.00	4.02
520	529	3.706594	TGGAGGGATGATACTTCTGTCAC	59.293	47.826	0.00	0.00	0.00	3.67
521	530	3.994317	TGGAGGGATGATACTTCTGTCA	58.006	45.455	0.00	0.00	0.00	3.58
522	531	4.590647	TCATGGAGGGATGATACTTCTGTC	59.409	45.833	0.00	0.00	0.00	3.51
523	532	4.560739	TCATGGAGGGATGATACTTCTGT	58.439	43.478	0.00	0.00	0.00	3.41
524	533	5.247792	TGATCATGGAGGGATGATACTTCTG	59.752	44.000	0.00	0.00	42.10	3.02
525	534	5.248020	GTGATCATGGAGGGATGATACTTCT	59.752	44.000	0.00	0.00	42.10	2.85
526	535	5.486526	GTGATCATGGAGGGATGATACTTC	58.513	45.833	0.00	0.00	42.10	3.01
527	536	4.288105	GGTGATCATGGAGGGATGATACTT	59.712	45.833	0.00	0.00	42.10	2.24
528	537	3.843027	GGTGATCATGGAGGGATGATACT	59.157	47.826	0.00	0.00	42.10	2.12
529	538	3.584406	TGGTGATCATGGAGGGATGATAC	59.416	47.826	0.00	0.00	42.10	2.24
530	539	3.873062	TGGTGATCATGGAGGGATGATA	58.127	45.455	0.00	0.00	42.10	2.15
531	540	2.709966	TGGTGATCATGGAGGGATGAT	58.290	47.619	0.00	0.00	44.24	2.45
532	541	2.195153	TGGTGATCATGGAGGGATGA	57.805	50.000	0.00	0.00	36.78	2.92
533	542	2.643304	AGATGGTGATCATGGAGGGATG	59.357	50.000	0.00	0.00	35.97	3.51
534	543	3.001325	AGATGGTGATCATGGAGGGAT	57.999	47.619	0.00	0.00	35.97	3.85
535	544	2.440627	CAAGATGGTGATCATGGAGGGA	59.559	50.000	0.00	0.00	35.97	4.20
536	545	2.174210	ACAAGATGGTGATCATGGAGGG	59.826	50.000	0.00	0.00	35.97	4.30
537	546	3.136077	AGACAAGATGGTGATCATGGAGG	59.864	47.826	0.00	0.00	35.97	4.30
538	547	4.418973	AGACAAGATGGTGATCATGGAG	57.581	45.455	0.00	0.00	35.97	3.86
539	548	4.964897	AGTAGACAAGATGGTGATCATGGA	59.035	41.667	0.00	0.00	35.97	3.41
540	549	5.287674	AGTAGACAAGATGGTGATCATGG	57.712	43.478	0.00	0.00	35.97	3.66
541	550	5.295950	GGAGTAGACAAGATGGTGATCATG	58.704	45.833	0.00	0.00	35.97	3.07
542	551	4.346418	GGGAGTAGACAAGATGGTGATCAT	59.654	45.833	0.00	0.00	39.13	2.45
543	552	3.706594	GGGAGTAGACAAGATGGTGATCA	59.293	47.826	0.00	0.00	0.00	2.92
544	553	3.706594	TGGGAGTAGACAAGATGGTGATC	59.293	47.826	0.00	0.00	0.00	2.92
545	554	3.724478	TGGGAGTAGACAAGATGGTGAT	58.276	45.455	0.00	0.00	0.00	3.06
546	555	3.184382	TGGGAGTAGACAAGATGGTGA	57.816	47.619	0.00	0.00	0.00	4.02
547	556	3.181461	GGATGGGAGTAGACAAGATGGTG	60.181	52.174	0.00	0.00	0.00	4.17
548	557	3.041946	GGATGGGAGTAGACAAGATGGT	58.958	50.000	0.00	0.00	0.00	3.55
549	558	3.041211	TGGATGGGAGTAGACAAGATGG	58.959	50.000	0.00	0.00	0.00	3.51
550	559	4.262808	GGATGGATGGGAGTAGACAAGATG	60.263	50.000	0.00	0.00	0.00	2.90
551	560	3.906846	GGATGGATGGGAGTAGACAAGAT	59.093	47.826	0.00	0.00	0.00	2.40
552	561	3.051803	AGGATGGATGGGAGTAGACAAGA	60.052	47.826	0.00	0.00	0.00	3.02
553	562	3.312890	AGGATGGATGGGAGTAGACAAG	58.687	50.000	0.00	0.00	0.00	3.16
554	563	3.309296	GAGGATGGATGGGAGTAGACAA	58.691	50.000	0.00	0.00	0.00	3.18
555	564	2.426414	GGAGGATGGATGGGAGTAGACA	60.426	54.545	0.00	0.00	0.00	3.41
556	565	2.252714	GGAGGATGGATGGGAGTAGAC	58.747	57.143	0.00	0.00	0.00	2.59
557	566	1.150135	GGGAGGATGGATGGGAGTAGA	59.850	57.143	0.00	0.00	0.00	2.59
558	567	1.132721	TGGGAGGATGGATGGGAGTAG	60.133	57.143	0.00	0.00	0.00	2.57
559	568	0.948816	TGGGAGGATGGATGGGAGTA	59.051	55.000	0.00	0.00	0.00	2.59
560	569	0.273161	ATGGGAGGATGGATGGGAGT	59.727	55.000	0.00	0.00	0.00	3.85
561	570	0.990374	GATGGGAGGATGGATGGGAG	59.010	60.000	0.00	0.00	0.00	4.30
562	571	0.574818	AGATGGGAGGATGGATGGGA	59.425	55.000	0.00	0.00	0.00	4.37
563	572	1.353694	GAAGATGGGAGGATGGATGGG	59.646	57.143	0.00	0.00	0.00	4.00
564	573	2.346529	AGAAGATGGGAGGATGGATGG	58.653	52.381	0.00	0.00	0.00	3.51
565	574	3.393609	TGAAGAAGATGGGAGGATGGATG	59.606	47.826	0.00	0.00	0.00	3.51
566	575	3.673343	TGAAGAAGATGGGAGGATGGAT	58.327	45.455	0.00	0.00	0.00	3.41
567	576	3.135161	TGAAGAAGATGGGAGGATGGA	57.865	47.619	0.00	0.00	0.00	3.41
568	577	3.434739	CCTTGAAGAAGATGGGAGGATGG	60.435	52.174	0.00	0.00	0.00	3.51
569	578	3.457380	TCCTTGAAGAAGATGGGAGGATG	59.543	47.826	0.00	0.00	0.00	3.51
570	579	3.740780	TCCTTGAAGAAGATGGGAGGAT	58.259	45.455	0.00	0.00	0.00	3.24
571	580	3.205519	TCCTTGAAGAAGATGGGAGGA	57.794	47.619	0.00	0.00	0.00	3.71
572	581	4.516652	ATTCCTTGAAGAAGATGGGAGG	57.483	45.455	0.00	0.00	0.00	4.30
573	582	7.059156	ACAATATTCCTTGAAGAAGATGGGAG	58.941	38.462	0.00	0.00	28.51	4.30
574	583	6.973642	ACAATATTCCTTGAAGAAGATGGGA	58.026	36.000	0.00	0.00	28.51	4.37
575	584	7.040823	GCTACAATATTCCTTGAAGAAGATGGG	60.041	40.741	0.00	0.00	28.51	4.00
576	585	7.307632	CGCTACAATATTCCTTGAAGAAGATGG	60.308	40.741	0.00	0.00	28.51	3.51
577	586	7.439356	TCGCTACAATATTCCTTGAAGAAGATG	59.561	37.037	0.00	0.00	28.51	2.90
578	587	7.500992	TCGCTACAATATTCCTTGAAGAAGAT	58.499	34.615	0.00	0.00	29.08	2.40
579	588	6.873997	TCGCTACAATATTCCTTGAAGAAGA	58.126	36.000	0.00	0.00	0.00	2.87
580	589	6.980978	TCTCGCTACAATATTCCTTGAAGAAG	59.019	38.462	0.00	0.00	0.00	2.85
581	590	6.873997	TCTCGCTACAATATTCCTTGAAGAA	58.126	36.000	0.00	0.00	0.00	2.52
582	591	6.096987	ACTCTCGCTACAATATTCCTTGAAGA	59.903	38.462	0.00	0.00	0.00	2.87
583	592	6.276847	ACTCTCGCTACAATATTCCTTGAAG	58.723	40.000	0.00	0.00	0.00	3.02
584	593	6.222038	ACTCTCGCTACAATATTCCTTGAA	57.778	37.500	0.00	0.00	0.00	2.69
585	594	5.854010	ACTCTCGCTACAATATTCCTTGA	57.146	39.130	0.00	0.00	0.00	3.02
586	595	5.463724	GGAACTCTCGCTACAATATTCCTTG	59.536	44.000	0.00	0.00	33.14	3.61
587	596	5.453480	GGGAACTCTCGCTACAATATTCCTT	60.453	44.000	0.00	0.00	35.68	3.36
588	597	4.039366	GGGAACTCTCGCTACAATATTCCT	59.961	45.833	0.00	0.00	35.68	3.36
589	598	4.039366	AGGGAACTCTCGCTACAATATTCC	59.961	45.833	0.00	0.00	42.72	3.01
590	599	5.203060	AGGGAACTCTCGCTACAATATTC	57.797	43.478	0.00	0.00	42.72	1.75
605	614	2.045047	TCAGGATGAGGAAGAGGGAACT	59.955	50.000	0.00	0.00	42.56	3.01
606	615	2.472029	TCAGGATGAGGAAGAGGGAAC	58.528	52.381	0.00	0.00	42.56	3.62
607	616	2.948889	TCAGGATGAGGAAGAGGGAA	57.051	50.000	0.00	0.00	42.56	3.97
619	628	0.462225	CACCTCTGCTGCTCAGGATG	60.462	60.000	20.12	12.30	43.06	3.51
620	629	1.624479	CCACCTCTGCTGCTCAGGAT	61.624	60.000	20.12	5.85	43.06	3.24
621	630	2.288778	CCACCTCTGCTGCTCAGGA	61.289	63.158	20.12	5.13	43.06	3.86
622	631	2.268280	CCACCTCTGCTGCTCAGG	59.732	66.667	13.83	13.83	43.06	3.86
623	632	1.079266	GACCACCTCTGCTGCTCAG	60.079	63.158	0.00	0.00	44.21	3.35
624	633	1.123861	AAGACCACCTCTGCTGCTCA	61.124	55.000	0.00	0.00	0.00	4.26
625	634	0.036022	AAAGACCACCTCTGCTGCTC	59.964	55.000	0.00	0.00	0.00	4.26
626	635	0.475906	AAAAGACCACCTCTGCTGCT	59.524	50.000	0.00	0.00	0.00	4.24
627	636	1.000938	CAAAAAGACCACCTCTGCTGC	60.001	52.381	0.00	0.00	0.00	5.25
628	637	1.000938	GCAAAAAGACCACCTCTGCTG	60.001	52.381	0.00	0.00	0.00	4.41
629	638	1.322442	GCAAAAAGACCACCTCTGCT	58.678	50.000	0.00	0.00	0.00	4.24
630	639	1.000938	CTGCAAAAAGACCACCTCTGC	60.001	52.381	0.00	0.00	0.00	4.26
631	640	1.000938	GCTGCAAAAAGACCACCTCTG	60.001	52.381	0.00	0.00	0.00	3.35
632	641	1.322442	GCTGCAAAAAGACCACCTCT	58.678	50.000	0.00	0.00	0.00	3.69
633	642	0.315251	GGCTGCAAAAAGACCACCTC	59.685	55.000	0.50	0.00	0.00	3.85
634	643	0.106015	AGGCTGCAAAAAGACCACCT	60.106	50.000	0.50	0.00	0.00	4.00
635	644	0.315251	GAGGCTGCAAAAAGACCACC	59.685	55.000	0.50	0.00	0.00	4.61
636	645	0.315251	GGAGGCTGCAAAAAGACCAC	59.685	55.000	0.00	0.00	0.00	4.16
637	646	0.827507	GGGAGGCTGCAAAAAGACCA	60.828	55.000	8.68	0.00	0.00	4.02
638	647	0.827507	TGGGAGGCTGCAAAAAGACC	60.828	55.000	8.68	0.00	0.00	3.85
639	648	0.600057	CTGGGAGGCTGCAAAAAGAC	59.400	55.000	8.68	0.00	0.00	3.01
640	649	0.478072	TCTGGGAGGCTGCAAAAAGA	59.522	50.000	8.68	2.18	0.00	2.52
641	650	1.553706	ATCTGGGAGGCTGCAAAAAG	58.446	50.000	8.68	0.00	0.00	2.27
642	651	2.726821	CTATCTGGGAGGCTGCAAAAA	58.273	47.619	8.68	0.00	0.00	1.94
643	652	1.683011	GCTATCTGGGAGGCTGCAAAA	60.683	52.381	8.68	0.00	0.00	2.44
644	653	0.107017	GCTATCTGGGAGGCTGCAAA	60.107	55.000	8.68	0.00	0.00	3.68
645	654	0.984961	AGCTATCTGGGAGGCTGCAA	60.985	55.000	8.68	0.00	33.50	4.08
646	655	1.383664	AGCTATCTGGGAGGCTGCA	60.384	57.895	8.68	0.00	33.50	4.41
647	656	1.071128	CAGCTATCTGGGAGGCTGC	59.929	63.158	0.00	0.00	44.03	5.25
649	658	0.189574	TAGCAGCTATCTGGGAGGCT	59.810	55.000	0.00	0.00	40.65	4.58
650	659	1.066286	CATAGCAGCTATCTGGGAGGC	60.066	57.143	12.36	0.00	40.65	4.70
651	660	2.533916	TCATAGCAGCTATCTGGGAGG	58.466	52.381	12.36	0.00	40.65	4.30
652	661	3.132646	GGATCATAGCAGCTATCTGGGAG	59.867	52.174	12.36	0.52	40.65	4.30
653	662	3.102972	GGATCATAGCAGCTATCTGGGA	58.897	50.000	12.36	7.25	40.65	4.37
654	663	3.106054	AGGATCATAGCAGCTATCTGGG	58.894	50.000	12.36	1.63	40.65	4.45
655	664	4.025360	AGAGGATCATAGCAGCTATCTGG	58.975	47.826	12.36	2.00	38.07	3.86
656	665	4.098349	GGAGAGGATCATAGCAGCTATCTG	59.902	50.000	12.36	4.31	39.77	2.90
657	666	4.264307	TGGAGAGGATCATAGCAGCTATCT	60.264	45.833	12.36	6.33	37.82	1.98
658	667	4.022603	TGGAGAGGATCATAGCAGCTATC	58.977	47.826	12.36	3.50	37.82	2.08
659	668	3.768757	GTGGAGAGGATCATAGCAGCTAT	59.231	47.826	9.33	9.33	37.82	2.97
660	669	3.161067	GTGGAGAGGATCATAGCAGCTA	58.839	50.000	4.10	4.10	37.82	3.32
661	670	1.969923	GTGGAGAGGATCATAGCAGCT	59.030	52.381	0.00	0.00	37.82	4.24
662	671	1.336702	CGTGGAGAGGATCATAGCAGC	60.337	57.143	0.00	0.00	37.82	5.25
663	672	1.336702	GCGTGGAGAGGATCATAGCAG	60.337	57.143	0.00	0.00	37.82	4.24
664	673	0.676184	GCGTGGAGAGGATCATAGCA	59.324	55.000	0.00	0.00	37.82	3.49
665	674	0.387878	CGCGTGGAGAGGATCATAGC	60.388	60.000	0.00	0.00	37.82	2.97
666	675	0.387878	GCGCGTGGAGAGGATCATAG	60.388	60.000	8.43	0.00	37.82	2.23
667	676	0.823769	AGCGCGTGGAGAGGATCATA	60.824	55.000	8.43	0.00	37.82	2.15
668	677	2.081425	GAGCGCGTGGAGAGGATCAT	62.081	60.000	8.43	0.00	37.82	2.45
669	678	2.755876	AGCGCGTGGAGAGGATCA	60.756	61.111	8.43	0.00	37.82	2.92
670	679	2.026879	GAGCGCGTGGAGAGGATC	59.973	66.667	8.43	0.00	0.00	3.36
671	680	2.441164	AGAGCGCGTGGAGAGGAT	60.441	61.111	8.43	0.00	0.00	3.24
672	681	3.134792	GAGAGCGCGTGGAGAGGA	61.135	66.667	8.43	0.00	0.00	3.71
673	682	2.705821	AAGAGAGCGCGTGGAGAGG	61.706	63.158	8.43	0.00	0.00	3.69
674	683	1.515952	CAAGAGAGCGCGTGGAGAG	60.516	63.158	8.43	0.00	0.00	3.20
675	684	2.568612	CAAGAGAGCGCGTGGAGA	59.431	61.111	8.43	0.00	0.00	3.71
676	685	3.184683	GCAAGAGAGCGCGTGGAG	61.185	66.667	8.43	0.00	0.00	3.86
677	686	3.989787	TGCAAGAGAGCGCGTGGA	61.990	61.111	8.43	0.00	37.31	4.02
678	687	3.782244	GTGCAAGAGAGCGCGTGG	61.782	66.667	8.43	0.00	37.31	4.94
682	691	0.952984	AAGGAAGTGCAAGAGAGCGC	60.953	55.000	0.00	0.00	45.04	5.92
683	692	1.196354	CAAAGGAAGTGCAAGAGAGCG	59.804	52.381	0.00	0.00	37.31	5.03
684	693	1.068679	GCAAAGGAAGTGCAAGAGAGC	60.069	52.381	0.00	0.00	41.80	4.09
685	694	2.985406	GCAAAGGAAGTGCAAGAGAG	57.015	50.000	0.00	0.00	41.80	3.20
692	701	2.719376	TCCTGTGCAAAGGAAGTGC	58.281	52.632	24.10	0.00	43.57	4.40
698	707	3.415212	TCTGAAAGATCCTGTGCAAAGG	58.585	45.455	17.77	17.77	38.67	3.11
699	708	4.321718	TCTCTGAAAGATCCTGTGCAAAG	58.678	43.478	0.00	0.00	45.62	2.77
700	709	4.356405	TCTCTGAAAGATCCTGTGCAAA	57.644	40.909	0.00	0.00	45.62	3.68
701	710	4.564782	ATCTCTGAAAGATCCTGTGCAA	57.435	40.909	0.00	0.00	45.62	4.08
702	711	4.259356	CAATCTCTGAAAGATCCTGTGCA	58.741	43.478	0.00	0.00	45.62	4.57
703	712	3.065095	GCAATCTCTGAAAGATCCTGTGC	59.935	47.826	0.00	0.00	45.62	4.57
704	713	4.259356	TGCAATCTCTGAAAGATCCTGTG	58.741	43.478	0.00	0.00	45.62	3.66
705	714	4.224594	TCTGCAATCTCTGAAAGATCCTGT	59.775	41.667	0.00	0.00	45.62	4.00
706	715	4.767478	TCTGCAATCTCTGAAAGATCCTG	58.233	43.478	0.00	0.00	45.62	3.86
707	716	5.432680	TTCTGCAATCTCTGAAAGATCCT	57.567	39.130	0.00	0.00	45.62	3.24
708	717	5.163673	GGTTTCTGCAATCTCTGAAAGATCC	60.164	44.000	0.00	0.00	45.62	3.36
709	718	5.647225	AGGTTTCTGCAATCTCTGAAAGATC	59.353	40.000	0.00	0.00	45.62	2.75
710	719	5.568392	AGGTTTCTGCAATCTCTGAAAGAT	58.432	37.500	0.00	0.00	45.62	2.40
711	720	4.978099	AGGTTTCTGCAATCTCTGAAAGA	58.022	39.130	0.00	0.00	43.69	2.52
712	721	4.155644	GGAGGTTTCTGCAATCTCTGAAAG	59.844	45.833	0.55	0.00	41.87	2.62
713	722	4.074970	GGAGGTTTCTGCAATCTCTGAAA	58.925	43.478	0.55	0.00	41.87	2.69
714	723	3.328931	AGGAGGTTTCTGCAATCTCTGAA	59.671	43.478	0.55	0.00	41.87	3.02
715	724	2.909006	AGGAGGTTTCTGCAATCTCTGA	59.091	45.455	0.55	0.00	41.87	3.27
716	725	3.347077	AGGAGGTTTCTGCAATCTCTG	57.653	47.619	0.55	0.00	41.87	3.35
717	726	4.718774	TGATAGGAGGTTTCTGCAATCTCT	59.281	41.667	0.55	0.00	41.87	3.10
718	727	5.028549	TGATAGGAGGTTTCTGCAATCTC	57.971	43.478	0.00	0.00	41.49	2.75
719	728	5.045286	AGTTGATAGGAGGTTTCTGCAATCT	60.045	40.000	0.00	0.00	33.43	2.40
720	729	5.189180	AGTTGATAGGAGGTTTCTGCAATC	58.811	41.667	0.00	0.00	33.43	2.67
721	730	5.184892	AGTTGATAGGAGGTTTCTGCAAT	57.815	39.130	0.00	0.00	33.43	3.56
722	731	4.640771	AGTTGATAGGAGGTTTCTGCAA	57.359	40.909	0.00	0.00	33.43	4.08
723	732	4.041567	TGAAGTTGATAGGAGGTTTCTGCA	59.958	41.667	0.00	0.00	33.43	4.41
724	733	4.579869	TGAAGTTGATAGGAGGTTTCTGC	58.420	43.478	0.00	0.00	0.00	4.26
725	734	6.042638	TCTGAAGTTGATAGGAGGTTTCTG	57.957	41.667	0.00	0.00	0.00	3.02
726	735	6.688073	TTCTGAAGTTGATAGGAGGTTTCT	57.312	37.500	0.00	0.00	0.00	2.52
727	736	7.065204	GTGATTCTGAAGTTGATAGGAGGTTTC	59.935	40.741	0.00	0.00	0.00	2.78
728	737	6.881602	GTGATTCTGAAGTTGATAGGAGGTTT	59.118	38.462	0.00	0.00	0.00	3.27
729	738	6.410540	GTGATTCTGAAGTTGATAGGAGGTT	58.589	40.000	0.00	0.00	0.00	3.50
730	739	5.104735	GGTGATTCTGAAGTTGATAGGAGGT	60.105	44.000	0.00	0.00	0.00	3.85
731	740	5.104776	TGGTGATTCTGAAGTTGATAGGAGG	60.105	44.000	0.00	0.00	0.00	4.30
732	741	5.982356	TGGTGATTCTGAAGTTGATAGGAG	58.018	41.667	0.00	0.00	0.00	3.69
733	742	5.627735	GCTGGTGATTCTGAAGTTGATAGGA	60.628	44.000	0.00	0.00	0.00	2.94
734	743	4.574013	GCTGGTGATTCTGAAGTTGATAGG	59.426	45.833	0.00	0.00	0.00	2.57
735	744	5.181009	TGCTGGTGATTCTGAAGTTGATAG	58.819	41.667	0.00	0.00	0.00	2.08
736	745	5.164620	TGCTGGTGATTCTGAAGTTGATA	57.835	39.130	0.00	0.00	0.00	2.15
737	746	4.025040	TGCTGGTGATTCTGAAGTTGAT	57.975	40.909	0.00	0.00	0.00	2.57
738	747	3.490439	TGCTGGTGATTCTGAAGTTGA	57.510	42.857	0.00	0.00	0.00	3.18
739	748	3.567164	AGTTGCTGGTGATTCTGAAGTTG	59.433	43.478	0.00	0.00	0.00	3.16
740	749	3.825328	AGTTGCTGGTGATTCTGAAGTT	58.175	40.909	0.00	0.00	0.00	2.66
741	750	3.498774	AGTTGCTGGTGATTCTGAAGT	57.501	42.857	0.00	0.00	0.00	3.01
742	751	4.843220	AAAGTTGCTGGTGATTCTGAAG	57.157	40.909	0.00	0.00	0.00	3.02
743	752	5.376625	ACTAAAGTTGCTGGTGATTCTGAA	58.623	37.500	0.00	0.00	0.00	3.02
744	753	4.973168	ACTAAAGTTGCTGGTGATTCTGA	58.027	39.130	0.00	0.00	0.00	3.27
745	754	5.239306	TGAACTAAAGTTGCTGGTGATTCTG	59.761	40.000	0.00	0.00	38.56	3.02
746	755	5.239525	GTGAACTAAAGTTGCTGGTGATTCT	59.760	40.000	0.00	0.00	38.56	2.40
747	756	5.452777	GTGAACTAAAGTTGCTGGTGATTC	58.547	41.667	0.00	0.00	38.56	2.52
748	757	4.024048	CGTGAACTAAAGTTGCTGGTGATT	60.024	41.667	0.00	0.00	38.56	2.57
749	758	3.498397	CGTGAACTAAAGTTGCTGGTGAT	59.502	43.478	0.00	0.00	38.56	3.06
750	759	2.869801	CGTGAACTAAAGTTGCTGGTGA	59.130	45.455	0.00	0.00	38.56	4.02
751	760	2.612212	ACGTGAACTAAAGTTGCTGGTG	59.388	45.455	0.00	0.00	38.56	4.17
752	761	2.612212	CACGTGAACTAAAGTTGCTGGT	59.388	45.455	10.90	0.00	38.56	4.00
753	762	2.869801	TCACGTGAACTAAAGTTGCTGG	59.130	45.455	17.62	0.00	38.56	4.85
754	763	3.059597	CCTCACGTGAACTAAAGTTGCTG	60.060	47.826	20.49	2.67	38.56	4.41
755	764	3.131396	CCTCACGTGAACTAAAGTTGCT	58.869	45.455	20.49	0.00	38.56	3.91
771	780	4.989279	ATATCATGTTTGCCAACCTCAC	57.011	40.909	0.00	0.00	31.02	3.51
772	781	5.999205	AAATATCATGTTTGCCAACCTCA	57.001	34.783	0.00	0.00	31.02	3.86
813	822	7.821652	TGTTAAAACATGACAACTTTGTCTCA	58.178	30.769	20.05	5.06	44.55	3.27
814	823	8.682128	TTGTTAAAACATGACAACTTTGTCTC	57.318	30.769	20.05	0.00	44.78	3.36
838	847	7.042791	CGAACATTTTTCATGGCAACTTTAGTT	60.043	33.333	0.00	0.00	39.12	2.24
839	848	6.420604	CGAACATTTTTCATGGCAACTTTAGT	59.579	34.615	0.00	0.00	37.61	2.24
841	850	6.507900	TCGAACATTTTTCATGGCAACTTTA	58.492	32.000	0.00	0.00	37.61	1.85
842	851	5.355596	TCGAACATTTTTCATGGCAACTTT	58.644	33.333	0.00	0.00	37.61	2.66
848	866	5.404968	TGTCATTTCGAACATTTTTCATGGC	59.595	36.000	0.00	0.00	0.00	4.40
849	867	7.449827	CATGTCATTTCGAACATTTTTCATGG	58.550	34.615	0.00	0.00	0.00	3.66
865	883	6.127253	CCCCTCAGATTTTAAGCATGTCATTT	60.127	38.462	0.00	0.00	0.00	2.32
884	902	1.344598	TGGACCCGATAAATCCCCTCA	60.345	52.381	0.00	0.00	0.00	3.86
887	905	2.092049	AGTTTGGACCCGATAAATCCCC	60.092	50.000	0.00	0.00	0.00	4.81
909	933	5.356751	TGGGAAATCATGGATTCGTGTTTAG	59.643	40.000	0.00	0.00	30.29	1.85
939	963	1.333347	CGTTCAATTTTGCGTCCACGA	60.333	47.619	2.58	0.00	43.02	4.35
974	1000	3.827898	CACGAGAGGGCGGGAGAC	61.828	72.222	0.00	0.00	36.64	3.36
1174	1207	4.863925	GAGTGAGAGGAGCGCGGC	62.864	72.222	8.83	0.00	0.00	6.53
1180	1213	4.200283	GGCCGCGAGTGAGAGGAG	62.200	72.222	8.23	0.00	32.51	3.69
1269	1302	1.074405	AGGATGGAGTTGCAGCAGAAA	59.926	47.619	2.55	0.00	0.00	2.52
1461	1494	2.685017	ATCAGCGAGGTGGCCAGA	60.685	61.111	5.11	0.00	0.00	3.86
1474	1507	0.882042	GTGGCATAGGACCGCATCAG	60.882	60.000	0.00	0.00	37.64	2.90
1518	1551	1.531149	AGCATTTCGTCGAACACCTTG	59.469	47.619	7.29	2.45	0.00	3.61
1527	1560	1.798223	TCCTTGACAAGCATTTCGTCG	59.202	47.619	9.85	0.00	32.17	5.12
1581	1614	0.661552	TCGTCCTCTTATTCCTCGCG	59.338	55.000	0.00	0.00	0.00	5.87
1605	1638	1.747924	TCATCGAAGAGCCTCAGAGTG	59.252	52.381	0.00	0.00	43.63	3.51
1608	1641	2.426842	TCTCATCGAAGAGCCTCAGA	57.573	50.000	12.74	0.00	43.63	3.27
1677	1710	2.827642	GTGCATGCCTGGAGGAGC	60.828	66.667	16.68	0.00	37.39	4.70
1737	1770	1.458398	CATAACCATGTTCCACCGCA	58.542	50.000	0.00	0.00	0.00	5.69
1884	1917	3.974222	GCCATTTGCTGCTAATCCC	57.026	52.632	6.35	0.00	36.87	3.85
1922	1955	6.436847	TGATTTACTCATTTCCTCAAATGCCA	59.563	34.615	3.05	0.00	46.01	4.92
2136	2169	4.762251	ACCTTCATCTCTTTAACCACAAGC	59.238	41.667	0.00	0.00	0.00	4.01
2172	2205	4.222114	CAAGAAGAGTTCGCCAAATTGTC	58.778	43.478	0.00	0.00	34.02	3.18
2175	2208	3.222603	ACCAAGAAGAGTTCGCCAAATT	58.777	40.909	0.00	0.00	34.02	1.82
2208	2241	3.018856	TCCAAGATCAACATGACCATGC	58.981	45.455	9.70	0.00	42.39	4.06
2236	2269	8.713737	TTCAGTTCAATTAGATGACTGATGAG	57.286	34.615	5.46	0.00	37.34	2.90
2241	2274	6.246449	CGCTTTCAGTTCAATTAGATGACTG	58.754	40.000	0.00	0.00	33.54	3.51
2289	2322	3.128349	CGCCGCATAGGTATTTAACAGT	58.872	45.455	0.00	0.00	43.70	3.55
2376	2409	0.957395	CTACAGTTGTGCAGCCAGGG	60.957	60.000	0.00	0.00	0.00	4.45
2391	2424	2.168496	AGCTCACCGTTAAGCTCTACA	58.832	47.619	0.00	0.00	45.57	2.74
2622	2655	0.874607	CCAGCCGTATTGGTCTACGC	60.875	60.000	0.00	0.00	42.37	4.42
2637	2670	0.449388	CACGGAGATTCTTTGCCAGC	59.551	55.000	0.00	0.00	0.00	4.85
2873	2927	4.259356	CATCACATCTGGTCATCAAGTGT	58.741	43.478	0.00	0.00	0.00	3.55
2902	2956	2.240667	AGTAGAATGCCTGGCAATCACT	59.759	45.455	32.04	27.44	43.62	3.41
2909	2963	3.870299	GCCCTAATAGTAGAATGCCTGGC	60.870	52.174	12.87	12.87	0.00	4.85
2910	2964	3.327757	TGCCCTAATAGTAGAATGCCTGG	59.672	47.826	0.00	0.00	0.00	4.45
2911	2965	4.623932	TGCCCTAATAGTAGAATGCCTG	57.376	45.455	0.00	0.00	0.00	4.85
2926	2980	2.304761	GGAATTGGGTCGATATGCCCTA	59.695	50.000	9.99	3.16	45.06	3.53
2936	2990	1.904287	TTCCTTGTGGAATTGGGTCG	58.096	50.000	0.00	0.00	46.57	4.79
2973	3028	4.651045	ACAGATGTGACTGCAGTCCATATA	59.349	41.667	37.23	21.41	44.15	0.86
3014	3069	4.802248	GCCAAGTCTCAGACATCACTCTTT	60.802	45.833	7.77	0.00	34.60	2.52
3017	3072	2.028658	TGCCAAGTCTCAGACATCACTC	60.029	50.000	7.77	0.00	34.60	3.51
3155	3210	0.169672	CAAGAAGCTGCCACAATCCG	59.830	55.000	0.00	0.00	0.00	4.18
3160	3215	0.395586	ACCAACAAGAAGCTGCCACA	60.396	50.000	0.00	0.00	0.00	4.17
3164	3219	1.265365	GTCAGACCAACAAGAAGCTGC	59.735	52.381	0.00	0.00	0.00	5.25
3168	3223	4.129380	TGATGTGTCAGACCAACAAGAAG	58.871	43.478	0.00	0.00	0.00	2.85
3214	3269	6.253512	GGCTTTATTATGCTTACTGTTTGTGC	59.746	38.462	0.00	0.00	0.00	4.57
3235	3336	4.080356	TCAGGCTTACACAGATATTGGCTT	60.080	41.667	0.00	0.00	0.00	4.35
3245	3346	5.471456	AGTCAAAATTCTCAGGCTTACACAG	59.529	40.000	0.00	0.00	0.00	3.66
3249	3350	6.372937	AGCTTAGTCAAAATTCTCAGGCTTAC	59.627	38.462	0.00	0.00	0.00	2.34
3254	3355	5.620879	GCCAAGCTTAGTCAAAATTCTCAGG	60.621	44.000	0.00	0.00	0.00	3.86
3262	3363	6.490040	ACTGAAATAGCCAAGCTTAGTCAAAA	59.510	34.615	0.00	0.00	40.44	2.44
3274	3375	2.029110	GCTGCCAAACTGAAATAGCCAA	60.029	45.455	0.00	0.00	0.00	4.52
3335	3440	7.673641	ATAATGCCAATGGTCCTTGAAAATA	57.326	32.000	0.00	0.00	0.00	1.40
3374	3480	2.409378	CGCCTTGCATTTCAACATTGTC	59.591	45.455	0.00	0.00	0.00	3.18
3516	3656	1.001293	TGGTCAGTACAGCAAGCTCTG	59.999	52.381	0.99	0.99	39.86	3.35
3630	3942	8.638685	AGCATCACATGAAAAATAAATAGTGC	57.361	30.769	0.00	0.00	0.00	4.40
3635	3947	8.426489	AGGCATAGCATCACATGAAAAATAAAT	58.574	29.630	0.00	0.00	0.00	1.40
3648	3960	2.245159	TACTGCAGGCATAGCATCAC	57.755	50.000	19.93	0.00	41.82	3.06
3679	3991	5.063017	TCCTACCTCCCAGTATGAACTAG	57.937	47.826	0.00	0.00	39.69	2.57
3688	4000	1.988406	GCCGTTCCTACCTCCCAGT	60.988	63.158	0.00	0.00	0.00	4.00
3689	4001	2.901042	GCCGTTCCTACCTCCCAG	59.099	66.667	0.00	0.00	0.00	4.45
3691	4003	3.846430	CCGCCGTTCCTACCTCCC	61.846	72.222	0.00	0.00	0.00	4.30
3692	4004	3.846430	CCCGCCGTTCCTACCTCC	61.846	72.222	0.00	0.00	0.00	4.30
3693	4005	3.073101	ACCCGCCGTTCCTACCTC	61.073	66.667	0.00	0.00	0.00	3.85
3749	4062	2.930682	GGAGACGGATCACTAAAGCAAC	59.069	50.000	0.00	0.00	0.00	4.17

Based at the University of Bristol with support from BBSRC.

AutoCloner maintained by Alex Coulton.