Multiple sequence alignment - TraesCS4B01G052000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G052000 chr4B 100.000 6085 0 0 1 6085 40784935 40778851 0.000000e+00 11237.0
1 TraesCS4B01G052000 chr4B 90.683 161 10 4 764 924 63765822 63765667 6.180000e-50 209.0
2 TraesCS4B01G052000 chr4B 95.775 71 3 0 5439 5509 571294690 571294760 1.390000e-21 115.0
3 TraesCS4B01G052000 chr4B 94.366 71 4 0 5439 5509 211473808 211473738 6.450000e-20 110.0
4 TraesCS4B01G052000 chr4B 94.203 69 4 0 5439 5507 571294757 571294689 8.340000e-19 106.0
5 TraesCS4B01G052000 chr4B 92.958 71 5 0 5439 5509 445142579 445142649 3.000000e-18 104.0
6 TraesCS4B01G052000 chr4D 95.746 4560 177 11 892 5442 28460533 28455982 0.000000e+00 7330.0
7 TraesCS4B01G052000 chr4D 93.418 471 21 7 2 467 28461489 28461024 0.000000e+00 689.0
8 TraesCS4B01G052000 chr4D 87.976 499 33 11 5591 6084 28455869 28455393 1.140000e-156 564.0
9 TraesCS4B01G052000 chr4D 95.050 202 8 1 568 767 28461028 28460827 3.540000e-82 316.0
10 TraesCS4B01G052000 chr4D 96.581 117 3 1 457 572 374220549 374220665 6.220000e-45 193.0
11 TraesCS4B01G052000 chr4D 97.647 85 2 0 5504 5588 28455986 28455902 4.910000e-31 147.0
12 TraesCS4B01G052000 chr4D 100.000 35 0 0 892 926 28460827 28460793 1.420000e-06 65.8
13 TraesCS4B01G052000 chr4D 87.719 57 6 1 5451 5506 293156036 293155980 1.420000e-06 65.8
14 TraesCS4B01G052000 chr4A 96.227 4347 151 4 889 5231 575027151 575031488 0.000000e+00 7107.0
15 TraesCS4B01G052000 chr4A 85.772 492 34 15 5593 6075 575032600 575033064 7.090000e-134 488.0
16 TraesCS4B01G052000 chr4A 88.235 272 16 10 2 261 575026406 575026673 1.650000e-80 311.0
17 TraesCS4B01G052000 chr4A 91.000 200 13 1 573 767 575026955 575027154 1.300000e-66 265.0
18 TraesCS4B01G052000 chr4A 88.406 207 13 5 258 461 575026753 575026951 7.880000e-59 239.0
19 TraesCS4B01G052000 chr4A 94.815 135 7 0 759 893 236160631 236160497 1.720000e-50 211.0
20 TraesCS4B01G052000 chr4A 91.946 149 10 2 755 903 652849889 652849743 2.220000e-49 207.0
21 TraesCS4B01G052000 chr4A 92.466 146 9 2 752 897 700470077 700469934 2.220000e-49 207.0
22 TraesCS4B01G052000 chr4A 85.263 95 14 0 5348 5442 575032383 575032477 1.400000e-16 99.0
23 TraesCS4B01G052000 chr5B 95.652 138 6 0 763 900 699386601 699386464 7.940000e-54 222.0
24 TraesCS4B01G052000 chr5B 91.946 149 10 2 751 899 591612464 591612318 2.220000e-49 207.0
25 TraesCS4B01G052000 chr5B 95.775 71 3 0 5439 5509 712311299 712311229 1.390000e-21 115.0
26 TraesCS4B01G052000 chr5B 94.366 71 4 0 5439 5509 641217351 641217281 6.450000e-20 110.0
27 TraesCS4B01G052000 chr5B 94.366 71 4 0 5439 5509 665952466 665952396 6.450000e-20 110.0
28 TraesCS4B01G052000 chr5B 94.366 71 4 0 5439 5509 712311232 712311302 6.450000e-20 110.0
29 TraesCS4B01G052000 chr3D 94.366 142 8 0 756 897 67064777 67064918 1.030000e-52 219.0
30 TraesCS4B01G052000 chr3D 96.581 117 3 1 457 572 509960455 509960339 6.220000e-45 193.0
31 TraesCS4B01G052000 chr3D 95.775 71 1 1 5439 5507 341026240 341026310 4.980000e-21 113.0
32 TraesCS4B01G052000 chr3D 90.244 82 1 2 5436 5511 508403130 508403210 3.880000e-17 100.0
33 TraesCS4B01G052000 chr3D 90.909 77 1 3 5439 5509 596561580 596561656 1.400000e-16 99.0
34 TraesCS4B01G052000 chr3D 92.754 69 1 1 5439 5507 532107227 532107163 5.020000e-16 97.1
35 TraesCS4B01G052000 chr3D 90.141 71 5 1 5439 5507 341026309 341026239 2.340000e-14 91.6
36 TraesCS4B01G052000 chr6D 94.928 138 6 1 756 893 35022319 35022455 1.330000e-51 215.0
37 TraesCS4B01G052000 chr6D 96.581 117 3 1 457 572 205413460 205413576 6.220000e-45 193.0
38 TraesCS4B01G052000 chr6D 92.500 80 1 3 5435 5510 420732485 420732407 6.450000e-20 110.0
39 TraesCS4B01G052000 chr6D 93.333 75 1 2 5439 5509 29889977 29889903 2.320000e-19 108.0
40 TraesCS4B01G052000 chr6D 91.667 72 4 2 5439 5509 18118451 18118521 1.400000e-16 99.0
41 TraesCS4B01G052000 chr6D 88.312 77 3 1 5439 5509 442713904 442713980 3.020000e-13 87.9
42 TraesCS4B01G052000 chr6D 100.000 38 0 0 5438 5475 297396241 297396204 3.040000e-08 71.3
43 TraesCS4B01G052000 chr6D 100.000 38 0 0 5438 5475 401298890 401298853 3.040000e-08 71.3
44 TraesCS4B01G052000 chr6D 100.000 35 0 0 5476 5510 455902740 455902774 1.420000e-06 65.8
45 TraesCS4B01G052000 chr6D 97.297 37 1 0 5476 5512 12644110 12644146 5.090000e-06 63.9
46 TraesCS4B01G052000 chr1B 94.891 137 7 0 754 890 626226869 626227005 1.330000e-51 215.0
47 TraesCS4B01G052000 chr1B 93.103 145 9 1 747 891 102627869 102627726 1.720000e-50 211.0
48 TraesCS4B01G052000 chr1B 94.444 72 4 0 5438 5509 490477860 490477931 1.790000e-20 111.0
49 TraesCS4B01G052000 chr1A 93.056 144 10 0 747 890 486045756 486045899 1.720000e-50 211.0
50 TraesCS4B01G052000 chr1A 95.041 121 5 1 462 581 584070208 584070088 8.050000e-44 189.0
51 TraesCS4B01G052000 chr1A 88.312 77 3 1 5439 5509 556643190 556643114 3.020000e-13 87.9
52 TraesCS4B01G052000 chr6B 98.198 111 2 0 461 571 120355393 120355503 1.730000e-45 195.0
53 TraesCS4B01G052000 chr6B 95.798 119 5 0 456 574 20752488 20752606 6.220000e-45 193.0
54 TraesCS4B01G052000 chr5D 96.581 117 3 1 457 572 65831552 65831436 6.220000e-45 193.0
55 TraesCS4B01G052000 chr5A 96.581 117 3 1 456 571 402092626 402092742 6.220000e-45 193.0
56 TraesCS4B01G052000 chr7A 94.355 124 5 2 456 578 32594377 32594499 8.050000e-44 189.0
57 TraesCS4B01G052000 chr3B 97.183 71 2 0 5439 5509 736425902 736425832 2.980000e-23 121.0
58 TraesCS4B01G052000 chr2D 95.588 68 3 0 5439 5506 32990644 32990577 6.450000e-20 110.0
59 TraesCS4B01G052000 chr2B 92.105 76 4 2 5432 5506 579154380 579154454 8.340000e-19 106.0
60 TraesCS4B01G052000 chrUn 92.958 71 5 0 5439 5509 408966250 408966320 3.000000e-18 104.0
61 TraesCS4B01G052000 chrUn 91.045 67 5 1 5440 5506 29745716 29745781 8.400000e-14 89.8
62 TraesCS4B01G052000 chrUn 88.312 77 2 3 5439 5509 302607878 302607803 1.090000e-12 86.1
63 TraesCS4B01G052000 chrUn 88.312 77 2 3 5439 5509 340429725 340429800 1.090000e-12 86.1
64 TraesCS4B01G052000 chrUn 88.000 75 3 2 5441 5509 97187934 97188008 3.910000e-12 84.2
65 TraesCS4B01G052000 chrUn 87.013 77 4 2 5439 5509 97268278 97268354 1.410000e-11 82.4
66 TraesCS4B01G052000 chrUn 100.000 37 0 0 5439 5475 90968768 90968804 1.090000e-07 69.4
67 TraesCS4B01G052000 chrUn 100.000 34 0 0 5476 5509 41577535 41577502 5.090000e-06 63.9
68 TraesCS4B01G052000 chrUn 100.000 34 0 0 5476 5509 104546033 104546000 5.090000e-06 63.9
69 TraesCS4B01G052000 chrUn 100.000 34 0 0 5476 5509 110488181 110488148 5.090000e-06 63.9
70 TraesCS4B01G052000 chrUn 100.000 34 0 0 5476 5509 131957668 131957635 5.090000e-06 63.9
71 TraesCS4B01G052000 chrUn 100.000 34 0 0 5476 5509 347033829 347033862 5.090000e-06 63.9
72 TraesCS4B01G052000 chrUn 97.143 35 0 1 5478 5512 218481678 218481711 2.370000e-04 58.4
73 TraesCS4B01G052000 chr1D 88.406 69 7 1 5439 5506 474820746 474820678 1.410000e-11 82.4
74 TraesCS4B01G052000 chr1D 97.561 41 1 0 5435 5475 84569151 84569191 3.040000e-08 71.3


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G052000 chr4B 40778851 40784935 6084 True 11237.000000 11237 100.000000 1 6085 1 chr4B.!!$R1 6084
1 TraesCS4B01G052000 chr4D 28455393 28461489 6096 True 1518.633333 7330 94.972833 2 6084 6 chr4D.!!$R2 6082
2 TraesCS4B01G052000 chr4A 575026406 575033064 6658 False 1418.166667 7107 89.150500 2 6075 6 chr4A.!!$F1 6073

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
782 1176 0.032813 TACTCCCTCCGTCCGGAAAT 60.033 55.000 5.23 0.0 44.66 2.17 F
785 1179 0.032813 TCCCTCCGTCCGGAAATACT 60.033 55.000 5.23 0.0 44.66 2.12 F
1644 2038 0.035152 CACTGCCAGGTGGAAGCATA 60.035 55.000 3.62 0.0 45.26 3.14 F
2277 2671 0.250901 TGCTGTTCAAGGAAGCCTCC 60.251 55.000 0.00 0.0 42.81 4.30 F
2344 2738 0.671781 ATGTGACGGTGCTGCTCTTC 60.672 55.000 0.00 0.0 0.00 2.87 F
2373 2767 0.676782 ACAAAGTATGGCGTCTGGGC 60.677 55.000 0.00 0.0 42.69 5.36 F
3761 4157 1.135083 CGAAGCGGGAAGTACACTGAT 60.135 52.381 0.00 0.0 0.00 2.90 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2354 2748 0.676782 GCCCAGACGCCATACTTTGT 60.677 55.000 0.00 0.00 0.00 2.83 R
2503 2897 1.303236 CTGCCATCCCACAAACCGA 60.303 57.895 0.00 0.00 0.00 4.69 R
3181 3577 0.579630 TTGTGTAAGCAGTTGACGCG 59.420 50.000 3.53 3.53 0.00 6.01 R
3877 4273 0.601558 TTTTAGCGACGTCTGCTCCT 59.398 50.000 28.98 14.77 42.85 3.69 R
4206 4602 2.232941 AGGCATGAAAGCAGGTGAAATG 59.767 45.455 0.00 0.00 35.83 2.32 R
4271 4667 8.516234 AGTTCAACAAGTTGTGTAAATGTAACA 58.484 29.630 9.79 0.00 40.60 2.41 R
5466 6702 0.390124 ACTCGTCGTGGCTAAAACCA 59.610 50.000 0.00 0.00 37.38 3.67 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
73 75 6.128117 ACAAGTACACTCTTCGCAAAGAAAAA 60.128 34.615 0.00 0.00 40.95 1.94
175 186 4.338118 CACAACAGAAAGGCCAGAACTAAA 59.662 41.667 5.01 0.00 0.00 1.85
187 198 4.398358 GCCAGAACTAAACTTCCCAATACC 59.602 45.833 0.00 0.00 0.00 2.73
191 202 6.884295 CAGAACTAAACTTCCCAATACCATGA 59.116 38.462 0.00 0.00 0.00 3.07
231 242 6.493115 TCCAGATGAGATAATTGACTCTCCTC 59.507 42.308 12.52 10.99 37.66 3.71
250 261 9.474920 CTCTCCTCTATAAGAAATTAGCAACTG 57.525 37.037 0.00 0.00 0.00 3.16
251 262 8.982723 TCTCCTCTATAAGAAATTAGCAACTGT 58.017 33.333 0.00 0.00 0.00 3.55
252 263 9.606631 CTCCTCTATAAGAAATTAGCAACTGTT 57.393 33.333 0.00 0.00 0.00 3.16
278 375 9.431887 TGTTCTACTTTTTAGTAAGCCATACAG 57.568 33.333 0.68 0.00 36.94 2.74
421 519 3.000727 ACCGTTGCAGATACAAACTAGC 58.999 45.455 0.00 0.00 0.00 3.42
452 550 2.508526 CCTATGGTTAGCATGGGAAGC 58.491 52.381 19.84 0.00 33.15 3.86
464 562 3.118223 GCATGGGAAGCCTCTTTACTAGT 60.118 47.826 0.00 0.00 0.00 2.57
465 563 4.101119 GCATGGGAAGCCTCTTTACTAGTA 59.899 45.833 0.00 0.00 0.00 1.82
466 564 5.602628 CATGGGAAGCCTCTTTACTAGTAC 58.397 45.833 0.91 0.00 0.00 2.73
467 565 4.944177 TGGGAAGCCTCTTTACTAGTACT 58.056 43.478 0.91 0.00 0.00 2.73
468 566 4.954826 TGGGAAGCCTCTTTACTAGTACTC 59.045 45.833 0.91 0.00 0.00 2.59
469 567 4.341806 GGGAAGCCTCTTTACTAGTACTCC 59.658 50.000 0.91 0.00 0.00 3.85
470 568 4.341806 GGAAGCCTCTTTACTAGTACTCCC 59.658 50.000 0.91 0.00 0.00 4.30
471 569 4.884887 AGCCTCTTTACTAGTACTCCCT 57.115 45.455 0.91 0.00 0.00 4.20
472 570 4.795469 AGCCTCTTTACTAGTACTCCCTC 58.205 47.826 0.91 0.00 0.00 4.30
473 571 3.890756 GCCTCTTTACTAGTACTCCCTCC 59.109 52.174 0.91 0.00 0.00 4.30
474 572 4.136051 CCTCTTTACTAGTACTCCCTCCG 58.864 52.174 0.91 0.00 0.00 4.63
475 573 4.385088 CCTCTTTACTAGTACTCCCTCCGT 60.385 50.000 0.91 0.00 0.00 4.69
476 574 5.184892 TCTTTACTAGTACTCCCTCCGTT 57.815 43.478 0.91 0.00 0.00 4.44
477 575 5.189180 TCTTTACTAGTACTCCCTCCGTTC 58.811 45.833 0.91 0.00 0.00 3.95
478 576 2.035530 ACTAGTACTCCCTCCGTTCG 57.964 55.000 0.00 0.00 0.00 3.95
479 577 1.307097 CTAGTACTCCCTCCGTTCGG 58.693 60.000 0.00 4.74 0.00 4.30
480 578 0.911769 TAGTACTCCCTCCGTTCGGA 59.088 55.000 13.34 13.34 0.00 4.55
481 579 0.038744 AGTACTCCCTCCGTTCGGAA 59.961 55.000 14.79 0.04 33.41 4.30
482 580 1.109609 GTACTCCCTCCGTTCGGAAT 58.890 55.000 14.79 2.09 33.41 3.01
483 581 1.479730 GTACTCCCTCCGTTCGGAATT 59.520 52.381 14.79 0.00 33.41 2.17
484 582 1.856629 ACTCCCTCCGTTCGGAATTA 58.143 50.000 14.79 2.82 33.41 1.40
485 583 1.479730 ACTCCCTCCGTTCGGAATTAC 59.520 52.381 14.79 0.00 33.41 1.89
486 584 1.755380 CTCCCTCCGTTCGGAATTACT 59.245 52.381 14.79 0.00 33.41 2.24
487 585 2.167900 CTCCCTCCGTTCGGAATTACTT 59.832 50.000 14.79 0.00 33.41 2.24
488 586 2.093869 TCCCTCCGTTCGGAATTACTTG 60.094 50.000 14.79 1.97 33.41 3.16
489 587 2.354403 CCCTCCGTTCGGAATTACTTGT 60.354 50.000 14.79 0.00 33.41 3.16
490 588 2.928116 CCTCCGTTCGGAATTACTTGTC 59.072 50.000 14.79 0.00 33.41 3.18
491 589 3.368116 CCTCCGTTCGGAATTACTTGTCT 60.368 47.826 14.79 0.00 33.41 3.41
492 590 3.841643 TCCGTTCGGAATTACTTGTCTC 58.158 45.455 11.66 0.00 0.00 3.36
493 591 2.597305 CCGTTCGGAATTACTTGTCTCG 59.403 50.000 5.19 0.00 0.00 4.04
494 592 2.597305 CGTTCGGAATTACTTGTCTCGG 59.403 50.000 0.00 0.00 0.00 4.63
495 593 3.671433 CGTTCGGAATTACTTGTCTCGGA 60.671 47.826 0.00 0.00 0.00 4.55
496 594 4.240096 GTTCGGAATTACTTGTCTCGGAA 58.760 43.478 0.00 0.00 0.00 4.30
497 595 4.524316 TCGGAATTACTTGTCTCGGAAA 57.476 40.909 0.00 0.00 0.00 3.13
498 596 5.080969 TCGGAATTACTTGTCTCGGAAAT 57.919 39.130 0.00 0.00 0.00 2.17
499 597 4.868171 TCGGAATTACTTGTCTCGGAAATG 59.132 41.667 0.00 0.00 0.00 2.32
500 598 4.034048 CGGAATTACTTGTCTCGGAAATGG 59.966 45.833 0.00 0.00 0.00 3.16
501 599 5.183228 GGAATTACTTGTCTCGGAAATGGA 58.817 41.667 0.00 0.00 0.00 3.41
502 600 5.823045 GGAATTACTTGTCTCGGAAATGGAT 59.177 40.000 0.00 0.00 0.00 3.41
503 601 6.238484 GGAATTACTTGTCTCGGAAATGGATG 60.238 42.308 0.00 0.00 0.00 3.51
504 602 3.703001 ACTTGTCTCGGAAATGGATGT 57.297 42.857 0.00 0.00 0.00 3.06
505 603 4.819105 ACTTGTCTCGGAAATGGATGTA 57.181 40.909 0.00 0.00 0.00 2.29
506 604 5.359194 ACTTGTCTCGGAAATGGATGTAT 57.641 39.130 0.00 0.00 0.00 2.29
507 605 5.360591 ACTTGTCTCGGAAATGGATGTATC 58.639 41.667 0.00 0.00 0.00 2.24
508 606 5.129485 ACTTGTCTCGGAAATGGATGTATCT 59.871 40.000 0.00 0.00 0.00 1.98
509 607 6.323996 ACTTGTCTCGGAAATGGATGTATCTA 59.676 38.462 0.00 0.00 0.00 1.98
510 608 6.724893 TGTCTCGGAAATGGATGTATCTAA 57.275 37.500 0.00 0.00 0.00 2.10
511 609 7.119709 TGTCTCGGAAATGGATGTATCTAAA 57.880 36.000 0.00 0.00 0.00 1.85
512 610 7.561251 TGTCTCGGAAATGGATGTATCTAAAA 58.439 34.615 0.00 0.00 0.00 1.52
513 611 7.494625 TGTCTCGGAAATGGATGTATCTAAAAC 59.505 37.037 0.00 0.00 0.00 2.43
514 612 7.711339 GTCTCGGAAATGGATGTATCTAAAACT 59.289 37.037 0.00 0.00 0.00 2.66
515 613 8.920174 TCTCGGAAATGGATGTATCTAAAACTA 58.080 33.333 0.00 0.00 0.00 2.24
516 614 9.542462 CTCGGAAATGGATGTATCTAAAACTAA 57.458 33.333 0.00 0.00 0.00 2.24
517 615 9.893634 TCGGAAATGGATGTATCTAAAACTAAA 57.106 29.630 0.00 0.00 0.00 1.85
543 641 9.664332 AATACATCTAGATACATCCATTTCTGC 57.336 33.333 4.54 0.00 0.00 4.26
544 642 6.162079 ACATCTAGATACATCCATTTCTGCG 58.838 40.000 4.54 0.00 0.00 5.18
545 643 6.015095 ACATCTAGATACATCCATTTCTGCGA 60.015 38.462 4.54 0.00 0.00 5.10
546 644 5.773575 TCTAGATACATCCATTTCTGCGAC 58.226 41.667 0.00 0.00 0.00 5.19
547 645 4.406648 AGATACATCCATTTCTGCGACA 57.593 40.909 0.00 0.00 0.00 4.35
548 646 4.769688 AGATACATCCATTTCTGCGACAA 58.230 39.130 0.00 0.00 0.00 3.18
549 647 4.813161 AGATACATCCATTTCTGCGACAAG 59.187 41.667 0.00 0.00 0.00 3.16
550 648 2.783135 ACATCCATTTCTGCGACAAGT 58.217 42.857 0.00 0.00 0.00 3.16
551 649 3.937814 ACATCCATTTCTGCGACAAGTA 58.062 40.909 0.00 0.00 0.00 2.24
552 650 4.323417 ACATCCATTTCTGCGACAAGTAA 58.677 39.130 0.00 0.00 0.00 2.24
553 651 4.943705 ACATCCATTTCTGCGACAAGTAAT 59.056 37.500 0.00 0.00 0.00 1.89
554 652 5.415701 ACATCCATTTCTGCGACAAGTAATT 59.584 36.000 0.00 0.00 0.00 1.40
555 653 5.545658 TCCATTTCTGCGACAAGTAATTC 57.454 39.130 0.00 0.00 0.00 2.17
556 654 4.394920 TCCATTTCTGCGACAAGTAATTCC 59.605 41.667 0.00 0.00 0.00 3.01
557 655 4.334443 CATTTCTGCGACAAGTAATTCCG 58.666 43.478 0.00 0.00 0.00 4.30
558 656 3.306917 TTCTGCGACAAGTAATTCCGA 57.693 42.857 0.00 0.00 0.00 4.55
559 657 3.306917 TCTGCGACAAGTAATTCCGAA 57.693 42.857 0.00 0.00 0.00 4.30
560 658 3.857052 TCTGCGACAAGTAATTCCGAAT 58.143 40.909 0.00 0.00 0.00 3.34
561 659 3.616821 TCTGCGACAAGTAATTCCGAATG 59.383 43.478 0.00 0.00 0.00 2.67
562 660 2.675844 TGCGACAAGTAATTCCGAATGG 59.324 45.455 0.00 0.00 0.00 3.16
563 661 2.933906 GCGACAAGTAATTCCGAATGGA 59.066 45.455 0.00 0.00 44.61 3.41
586 684 2.963101 GGAGTACCTTTTTGGGTTTGCT 59.037 45.455 0.00 0.00 40.48 3.91
668 766 6.597832 TTCTGAAACCAGGAAAAGAAACAA 57.402 33.333 0.00 0.00 32.62 2.83
671 769 8.299990 TCTGAAACCAGGAAAAGAAACAAATA 57.700 30.769 0.00 0.00 32.62 1.40
746 1140 3.057876 TGCAAGCTGTTAATGGTTTACCG 60.058 43.478 0.00 0.00 39.43 4.02
752 1146 5.410439 AGCTGTTAATGGTTTACCGTACTTG 59.590 40.000 0.00 0.00 39.43 3.16
769 1163 8.633561 ACCGTACTTGTATATTTTACTACTCCC 58.366 37.037 0.00 0.00 0.00 4.30
770 1164 8.854117 CCGTACTTGTATATTTTACTACTCCCT 58.146 37.037 0.00 0.00 0.00 4.20
771 1165 9.890352 CGTACTTGTATATTTTACTACTCCCTC 57.110 37.037 0.00 0.00 0.00 4.30
773 1167 7.949434 ACTTGTATATTTTACTACTCCCTCCG 58.051 38.462 0.00 0.00 0.00 4.63
774 1168 7.562821 ACTTGTATATTTTACTACTCCCTCCGT 59.437 37.037 0.00 0.00 0.00 4.69
775 1169 7.516198 TGTATATTTTACTACTCCCTCCGTC 57.484 40.000 0.00 0.00 0.00 4.79
776 1170 6.491403 TGTATATTTTACTACTCCCTCCGTCC 59.509 42.308 0.00 0.00 0.00 4.79
777 1171 1.755179 TTTACTACTCCCTCCGTCCG 58.245 55.000 0.00 0.00 0.00 4.79
778 1172 0.107017 TTACTACTCCCTCCGTCCGG 60.107 60.000 0.00 0.00 0.00 5.14
779 1173 0.982852 TACTACTCCCTCCGTCCGGA 60.983 60.000 0.00 0.00 42.90 5.14
780 1174 1.077212 CTACTCCCTCCGTCCGGAA 60.077 63.158 5.23 0.00 44.66 4.30
781 1175 0.682209 CTACTCCCTCCGTCCGGAAA 60.682 60.000 5.23 0.00 44.66 3.13
782 1176 0.032813 TACTCCCTCCGTCCGGAAAT 60.033 55.000 5.23 0.00 44.66 2.17
783 1177 0.032813 ACTCCCTCCGTCCGGAAATA 60.033 55.000 5.23 0.00 44.66 1.40
784 1178 0.388294 CTCCCTCCGTCCGGAAATAC 59.612 60.000 5.23 0.00 44.66 1.89
785 1179 0.032813 TCCCTCCGTCCGGAAATACT 60.033 55.000 5.23 0.00 44.66 2.12
786 1180 0.828677 CCCTCCGTCCGGAAATACTT 59.171 55.000 5.23 0.00 44.66 2.24
787 1181 1.472728 CCCTCCGTCCGGAAATACTTG 60.473 57.143 5.23 0.00 44.66 3.16
788 1182 1.206371 CCTCCGTCCGGAAATACTTGT 59.794 52.381 5.23 0.00 44.66 3.16
789 1183 2.537401 CTCCGTCCGGAAATACTTGTC 58.463 52.381 5.23 0.00 44.66 3.18
790 1184 1.894466 TCCGTCCGGAAATACTTGTCA 59.106 47.619 5.23 0.00 42.05 3.58
791 1185 2.498481 TCCGTCCGGAAATACTTGTCAT 59.502 45.455 5.23 0.00 42.05 3.06
792 1186 2.864343 CCGTCCGGAAATACTTGTCATC 59.136 50.000 5.23 0.00 37.50 2.92
793 1187 3.517602 CGTCCGGAAATACTTGTCATCA 58.482 45.455 5.23 0.00 0.00 3.07
794 1188 3.930229 CGTCCGGAAATACTTGTCATCAA 59.070 43.478 5.23 0.00 0.00 2.57
795 1189 4.390603 CGTCCGGAAATACTTGTCATCAAA 59.609 41.667 5.23 0.00 32.87 2.69
796 1190 5.106869 CGTCCGGAAATACTTGTCATCAAAA 60.107 40.000 5.23 0.00 32.87 2.44
797 1191 6.403200 CGTCCGGAAATACTTGTCATCAAAAT 60.403 38.462 5.23 0.00 32.87 1.82
798 1192 6.747280 GTCCGGAAATACTTGTCATCAAAATG 59.253 38.462 5.23 0.00 32.87 2.32
799 1193 6.657117 TCCGGAAATACTTGTCATCAAAATGA 59.343 34.615 0.00 0.00 39.63 2.57
800 1194 7.175816 TCCGGAAATACTTGTCATCAAAATGAA 59.824 33.333 0.00 0.00 43.42 2.57
801 1195 7.975616 CCGGAAATACTTGTCATCAAAATGAAT 59.024 33.333 0.00 0.00 43.42 2.57
809 1203 8.096414 ACTTGTCATCAAAATGAATAAAAGGGG 58.904 33.333 0.00 0.00 43.42 4.79
810 1204 7.789202 TGTCATCAAAATGAATAAAAGGGGA 57.211 32.000 0.00 0.00 43.42 4.81
811 1205 8.378115 TGTCATCAAAATGAATAAAAGGGGAT 57.622 30.769 0.00 0.00 43.42 3.85
812 1206 8.259411 TGTCATCAAAATGAATAAAAGGGGATG 58.741 33.333 0.00 0.00 43.42 3.51
813 1207 8.260114 GTCATCAAAATGAATAAAAGGGGATGT 58.740 33.333 0.00 0.00 43.42 3.06
814 1208 9.486123 TCATCAAAATGAATAAAAGGGGATGTA 57.514 29.630 0.00 0.00 38.97 2.29
817 1211 9.713684 TCAAAATGAATAAAAGGGGATGTATCT 57.286 29.630 0.00 0.00 0.00 1.98
822 1216 7.667557 TGAATAAAAGGGGATGTATCTAGACG 58.332 38.462 0.00 0.00 0.00 4.18
823 1217 7.289317 TGAATAAAAGGGGATGTATCTAGACGT 59.711 37.037 0.00 0.00 0.00 4.34
824 1218 8.716674 AATAAAAGGGGATGTATCTAGACGTA 57.283 34.615 0.00 0.00 0.00 3.57
825 1219 8.896722 ATAAAAGGGGATGTATCTAGACGTAT 57.103 34.615 0.00 0.00 0.00 3.06
826 1220 7.613551 AAAAGGGGATGTATCTAGACGTATT 57.386 36.000 0.00 0.00 0.00 1.89
827 1221 7.613551 AAAGGGGATGTATCTAGACGTATTT 57.386 36.000 0.00 0.00 0.00 1.40
828 1222 7.613551 AAGGGGATGTATCTAGACGTATTTT 57.386 36.000 0.00 0.00 0.00 1.82
829 1223 8.716674 AAGGGGATGTATCTAGACGTATTTTA 57.283 34.615 0.00 0.00 0.00 1.52
830 1224 8.350852 AGGGGATGTATCTAGACGTATTTTAG 57.649 38.462 0.00 0.00 0.00 1.85
831 1225 7.949006 AGGGGATGTATCTAGACGTATTTTAGT 59.051 37.037 0.00 0.00 0.00 2.24
832 1226 8.583296 GGGGATGTATCTAGACGTATTTTAGTT 58.417 37.037 0.00 0.00 0.00 2.24
866 1260 7.789202 TCCCTTTTTATCCATTTTGATGACA 57.211 32.000 0.00 0.00 0.00 3.58
867 1261 8.200024 TCCCTTTTTATCCATTTTGATGACAA 57.800 30.769 0.00 0.00 0.00 3.18
868 1262 8.313292 TCCCTTTTTATCCATTTTGATGACAAG 58.687 33.333 0.00 0.00 37.32 3.16
869 1263 8.096414 CCCTTTTTATCCATTTTGATGACAAGT 58.904 33.333 0.00 0.00 37.32 3.16
870 1264 8.928733 CCTTTTTATCCATTTTGATGACAAGTG 58.071 33.333 0.00 0.00 37.32 3.16
871 1265 9.480053 CTTTTTATCCATTTTGATGACAAGTGT 57.520 29.630 0.00 0.00 37.32 3.55
872 1266 9.829507 TTTTTATCCATTTTGATGACAAGTGTT 57.170 25.926 0.00 0.00 37.32 3.32
873 1267 9.829507 TTTTATCCATTTTGATGACAAGTGTTT 57.170 25.926 0.00 0.00 37.32 2.83
874 1268 9.829507 TTTATCCATTTTGATGACAAGTGTTTT 57.170 25.926 0.00 0.00 37.32 2.43
875 1269 7.951530 ATCCATTTTGATGACAAGTGTTTTC 57.048 32.000 0.00 0.00 37.32 2.29
876 1270 5.976534 TCCATTTTGATGACAAGTGTTTTCG 59.023 36.000 0.00 0.00 37.32 3.46
877 1271 5.175491 CCATTTTGATGACAAGTGTTTTCGG 59.825 40.000 0.00 0.00 37.32 4.30
878 1272 5.568685 TTTTGATGACAAGTGTTTTCGGA 57.431 34.783 0.00 0.00 37.32 4.55
879 1273 4.545823 TTGATGACAAGTGTTTTCGGAC 57.454 40.909 0.00 0.00 0.00 4.79
880 1274 2.542178 TGATGACAAGTGTTTTCGGACG 59.458 45.455 0.00 0.00 0.00 4.79
881 1275 1.292061 TGACAAGTGTTTTCGGACGG 58.708 50.000 0.00 0.00 0.00 4.79
882 1276 1.134759 TGACAAGTGTTTTCGGACGGA 60.135 47.619 0.00 0.00 0.00 4.69
883 1277 1.525619 GACAAGTGTTTTCGGACGGAG 59.474 52.381 0.00 0.00 0.00 4.63
884 1278 0.865769 CAAGTGTTTTCGGACGGAGG 59.134 55.000 0.00 0.00 0.00 4.30
885 1279 0.250166 AAGTGTTTTCGGACGGAGGG 60.250 55.000 0.00 0.00 0.00 4.30
886 1280 1.117142 AGTGTTTTCGGACGGAGGGA 61.117 55.000 0.00 0.00 0.00 4.20
887 1281 0.669625 GTGTTTTCGGACGGAGGGAG 60.670 60.000 0.00 0.00 0.00 4.30
888 1282 1.117142 TGTTTTCGGACGGAGGGAGT 61.117 55.000 0.00 0.00 0.00 3.85
889 1283 0.890683 GTTTTCGGACGGAGGGAGTA 59.109 55.000 0.00 0.00 0.00 2.59
890 1284 1.135170 GTTTTCGGACGGAGGGAGTAG 60.135 57.143 0.00 0.00 0.00 2.57
1185 1579 2.660802 GAAGGGCGGTCGGAGAAA 59.339 61.111 0.00 0.00 39.69 2.52
1287 1681 0.721154 TCAATGTCATCGCGTTCAGC 59.279 50.000 5.77 0.00 43.95 4.26
1339 1733 1.601477 CATGCAGTGCCCAGTGTCA 60.601 57.895 13.72 4.40 34.32 3.58
1564 1958 0.040204 CCCCACAGAATTTCCTGCCT 59.960 55.000 0.00 0.00 37.68 4.75
1644 2038 0.035152 CACTGCCAGGTGGAAGCATA 60.035 55.000 3.62 0.00 45.26 3.14
1818 2212 1.875576 GCCACTGATATCCCTCAAGCG 60.876 57.143 0.00 0.00 0.00 4.68
1827 2221 2.747855 CCTCAAGCGGCCAGGTTC 60.748 66.667 2.24 0.00 38.72 3.62
1935 2329 1.225855 TTAGCTTGTGTGGTTCAGCG 58.774 50.000 0.00 0.00 0.00 5.18
2202 2596 4.963276 TGTCAACAAGGAGTTTGAAGTG 57.037 40.909 0.00 0.00 38.74 3.16
2211 2605 4.016444 AGGAGTTTGAAGTGCAGAAACAA 58.984 39.130 11.19 3.40 32.96 2.83
2253 2647 2.416893 GAGGACGCAAACAATTCTCTCC 59.583 50.000 0.00 0.00 0.00 3.71
2277 2671 0.250901 TGCTGTTCAAGGAAGCCTCC 60.251 55.000 0.00 0.00 42.81 4.30
2344 2738 0.671781 ATGTGACGGTGCTGCTCTTC 60.672 55.000 0.00 0.00 0.00 2.87
2354 2748 0.833287 GCTGCTCTTCTGTATGGGGA 59.167 55.000 0.00 0.00 0.00 4.81
2373 2767 0.676782 ACAAAGTATGGCGTCTGGGC 60.677 55.000 0.00 0.00 42.69 5.36
2400 2794 1.743958 CCAACCGAGTCTCAGATACGT 59.256 52.381 0.00 0.00 0.00 3.57
2503 2897 3.566130 GCCTCTGCTCTTGGTGATT 57.434 52.632 0.00 0.00 33.53 2.57
2575 2969 2.028112 TGGTTCAGGTCACATACAGCTC 60.028 50.000 0.00 0.00 0.00 4.09
2607 3001 1.177401 GGGGAGGTGCAAAGAATGAC 58.823 55.000 0.00 0.00 0.00 3.06
3062 3456 4.344968 AGCTTTGCAGGGTGAGTAAATTTT 59.655 37.500 0.00 0.00 0.00 1.82
3094 3488 9.901172 TTTGTTTTCTCTATCTATTTACCTCCC 57.099 33.333 0.00 0.00 0.00 4.30
3120 3514 5.395435 GCCTACTTTACCTTCCTCCTTAGTG 60.395 48.000 0.00 0.00 0.00 2.74
3122 3516 5.741962 ACTTTACCTTCCTCCTTAGTGAC 57.258 43.478 0.00 0.00 0.00 3.67
3123 3517 5.404395 ACTTTACCTTCCTCCTTAGTGACT 58.596 41.667 0.00 0.00 0.00 3.41
3124 3518 5.481122 ACTTTACCTTCCTCCTTAGTGACTC 59.519 44.000 0.00 0.00 0.00 3.36
3175 3571 5.031066 TGTGTGTTGAACCTAGCTAACTT 57.969 39.130 0.00 0.00 0.00 2.66
3181 3577 7.386848 TGTGTTGAACCTAGCTAACTTGTTATC 59.613 37.037 0.00 0.00 0.00 1.75
3218 3614 6.932901 ACACAATTTGCGATTGATAACTTG 57.067 33.333 16.68 7.87 33.51 3.16
3233 3629 9.706691 ATTGATAACTTGGTAATATCGATCGTT 57.293 29.630 15.94 9.65 28.39 3.85
3253 3649 8.980481 ATCGTTTCATGGGTCTCTAATAAATT 57.020 30.769 0.00 0.00 0.00 1.82
3629 4025 2.059541 GGTGAAGTGTTCGACAGTAGC 58.940 52.381 0.00 0.00 30.24 3.58
3761 4157 1.135083 CGAAGCGGGAAGTACACTGAT 60.135 52.381 0.00 0.00 0.00 2.90
3877 4273 2.360350 GCAGGTGCAGCAAGCCTA 60.360 61.111 19.63 0.00 44.83 3.93
3890 4286 1.658686 AAGCCTAGGAGCAGACGTCG 61.659 60.000 14.75 6.47 34.23 5.12
3978 4374 6.877611 TTTACTCCAGAAAAGCACTAAAGG 57.122 37.500 0.00 0.00 0.00 3.11
4034 4430 7.385478 CAGATCCATGTCTCAGATAATTGTCAG 59.615 40.741 4.92 0.00 0.00 3.51
4124 4520 8.030692 TGCCAAATCTTCTGAATTGTTCTATTG 58.969 33.333 0.00 0.00 32.69 1.90
4198 4594 2.468409 CGTACGTTGATGTCGTTGTTCA 59.532 45.455 7.22 0.00 41.72 3.18
4206 4602 3.745975 TGATGTCGTTGTTCATTGTCCTC 59.254 43.478 0.00 0.00 0.00 3.71
4222 4618 3.149196 GTCCTCATTTCACCTGCTTTCA 58.851 45.455 0.00 0.00 0.00 2.69
4223 4619 3.760684 GTCCTCATTTCACCTGCTTTCAT 59.239 43.478 0.00 0.00 0.00 2.57
4225 4621 3.508762 CTCATTTCACCTGCTTTCATGC 58.491 45.455 0.00 0.00 0.00 4.06
4226 4622 2.231964 TCATTTCACCTGCTTTCATGCC 59.768 45.455 0.00 0.00 0.00 4.40
4622 5018 3.134458 GCAACTAGTGTATGGAGATGGC 58.866 50.000 0.00 0.00 0.00 4.40
4646 5042 1.472376 CGACTCCAGCAGATCCTTTCC 60.472 57.143 0.00 0.00 0.00 3.13
4761 5157 6.486657 TCTTCACCTTATTGACCTTGAACTTG 59.513 38.462 0.00 0.00 0.00 3.16
4815 5214 7.776933 ATTTCTGAAAAGGAAGTTTTGAAGC 57.223 32.000 6.95 0.00 38.54 3.86
4822 5221 5.521906 AAGGAAGTTTTGAAGCCTTCTTC 57.478 39.130 5.96 0.75 46.85 2.87
4832 5232 0.033699 AGCCTTCTTCTGGGAATGCC 60.034 55.000 0.00 0.00 37.49 4.40
4845 5245 3.118038 TGGGAATGCCTAGTGATGGTTAC 60.118 47.826 0.00 0.00 0.00 2.50
4884 5284 0.393537 CAGGATCAAGCACCAGGGAC 60.394 60.000 0.00 0.00 0.00 4.46
4932 5332 2.080286 AATGTTTGAGGAGGACGACG 57.920 50.000 0.00 0.00 0.00 5.12
4935 5335 3.277211 TTTGAGGAGGACGACGCGG 62.277 63.158 12.47 0.00 0.00 6.46
4952 5352 3.086600 GGGCAGTCAGAGGAGGGG 61.087 72.222 0.00 0.00 0.00 4.79
5031 5431 0.109342 AAGGGAAGCTGGTGTGTCAG 59.891 55.000 0.00 0.00 37.79 3.51
5051 5451 1.227089 CTTCATCCTCACCGCCGAG 60.227 63.158 0.00 0.00 0.00 4.63
5074 5474 3.879351 CTTGCGCTCCAACGGCAAC 62.879 63.158 9.73 0.00 41.34 4.17
5102 5502 1.881973 TGATGAAGAAGCCAGTGCAAC 59.118 47.619 0.00 0.00 41.13 4.17
5148 5550 5.750067 TGAAACAACTCTAACGAAGTACACC 59.250 40.000 0.00 0.00 45.00 4.16
5154 5556 1.983605 CTAACGAAGTACACCAGTGCG 59.016 52.381 0.00 0.00 45.00 5.34
5171 5573 1.202087 TGCGGTGTGTTTCTTTTGTCG 60.202 47.619 0.00 0.00 0.00 4.35
5198 5600 2.493278 GCTGGCTTTGCATCTTTCCTTA 59.507 45.455 0.00 0.00 0.00 2.69
5206 5608 6.364435 GCTTTGCATCTTTCCTTACTTTCTTG 59.636 38.462 0.00 0.00 0.00 3.02
5247 5649 3.319972 GGATACTACCTATGGAACGCACA 59.680 47.826 0.00 0.00 0.00 4.57
5250 5652 0.177141 TACCTATGGAACGCACAGCC 59.823 55.000 0.00 0.00 0.00 4.85
5315 5717 8.877864 AGATCATTGTTTCCCTAACACATTAA 57.122 30.769 0.00 0.00 46.09 1.40
5316 5718 9.479549 AGATCATTGTTTCCCTAACACATTAAT 57.520 29.630 0.00 0.00 46.09 1.40
5327 5730 9.537852 TCCCTAACACATTAATACTACGGATAT 57.462 33.333 0.00 0.00 0.00 1.63
5341 5744 2.623416 ACGGATATGACGCTGAATGAGA 59.377 45.455 0.00 0.00 34.00 3.27
5343 5746 3.304996 CGGATATGACGCTGAATGAGAGT 60.305 47.826 0.00 0.00 37.43 3.24
5346 5749 2.070262 TGACGCTGAATGAGAGTGTG 57.930 50.000 0.00 0.00 34.37 3.82
5377 6613 5.238214 GGATATTTTTCACCTAGCAGCTCAG 59.762 44.000 0.00 0.00 0.00 3.35
5380 6616 1.930251 TTCACCTAGCAGCTCAGTCT 58.070 50.000 0.00 0.00 0.00 3.24
5381 6617 1.180907 TCACCTAGCAGCTCAGTCTG 58.819 55.000 0.00 0.00 37.15 3.51
5382 6618 0.175302 CACCTAGCAGCTCAGTCTGG 59.825 60.000 0.00 0.00 34.74 3.86
5383 6619 0.252012 ACCTAGCAGCTCAGTCTGGT 60.252 55.000 0.00 6.16 45.55 4.00
5384 6620 0.901124 CCTAGCAGCTCAGTCTGGTT 59.099 55.000 0.00 0.00 41.51 3.67
5386 6622 1.274728 CTAGCAGCTCAGTCTGGTTGT 59.725 52.381 0.00 0.00 41.51 3.32
5390 6626 0.839946 AGCTCAGTCTGGTTGTTGGT 59.160 50.000 0.00 0.00 0.00 3.67
5404 6640 7.776030 TCTGGTTGTTGGTAGAAACTTTTATCA 59.224 33.333 0.00 0.00 0.00 2.15
5408 6644 7.504924 TGTTGGTAGAAACTTTTATCACTGG 57.495 36.000 0.00 0.00 0.00 4.00
5413 6649 8.792633 TGGTAGAAACTTTTATCACTGGAAATG 58.207 33.333 0.00 0.00 0.00 2.32
5437 6673 3.652869 AGAAGTTTTCTCTGGATCCCACA 59.347 43.478 9.90 0.00 34.07 4.17
5438 6674 4.290722 AGAAGTTTTCTCTGGATCCCACAT 59.709 41.667 9.90 0.00 34.07 3.21
5439 6675 5.488919 AGAAGTTTTCTCTGGATCCCACATA 59.511 40.000 9.90 0.00 34.07 2.29
5440 6676 5.104259 AGTTTTCTCTGGATCCCACATAC 57.896 43.478 9.90 0.00 0.00 2.39
5441 6677 4.785376 AGTTTTCTCTGGATCCCACATACT 59.215 41.667 9.90 1.45 0.00 2.12
5442 6678 5.104735 AGTTTTCTCTGGATCCCACATACTC 60.105 44.000 9.90 0.00 0.00 2.59
5443 6679 2.964209 TCTCTGGATCCCACATACTCC 58.036 52.381 9.90 0.00 0.00 3.85
5444 6680 1.974236 CTCTGGATCCCACATACTCCC 59.026 57.143 9.90 0.00 0.00 4.30
5445 6681 1.580658 TCTGGATCCCACATACTCCCT 59.419 52.381 9.90 0.00 0.00 4.20
5446 6682 1.974236 CTGGATCCCACATACTCCCTC 59.026 57.143 9.90 0.00 0.00 4.30
5447 6683 1.353091 GGATCCCACATACTCCCTCC 58.647 60.000 0.00 0.00 0.00 4.30
5448 6684 0.969894 GATCCCACATACTCCCTCCG 59.030 60.000 0.00 0.00 0.00 4.63
5449 6685 0.264955 ATCCCACATACTCCCTCCGT 59.735 55.000 0.00 0.00 0.00 4.69
5450 6686 0.042131 TCCCACATACTCCCTCCGTT 59.958 55.000 0.00 0.00 0.00 4.44
5451 6687 0.464452 CCCACATACTCCCTCCGTTC 59.536 60.000 0.00 0.00 0.00 3.95
5452 6688 0.464452 CCACATACTCCCTCCGTTCC 59.536 60.000 0.00 0.00 0.00 3.62
5453 6689 1.191535 CACATACTCCCTCCGTTCCA 58.808 55.000 0.00 0.00 0.00 3.53
5454 6690 1.553248 CACATACTCCCTCCGTTCCAA 59.447 52.381 0.00 0.00 0.00 3.53
5455 6691 2.027561 CACATACTCCCTCCGTTCCAAA 60.028 50.000 0.00 0.00 0.00 3.28
5456 6692 2.844348 ACATACTCCCTCCGTTCCAAAT 59.156 45.455 0.00 0.00 0.00 2.32
5457 6693 3.265995 ACATACTCCCTCCGTTCCAAATT 59.734 43.478 0.00 0.00 0.00 1.82
5458 6694 4.472108 ACATACTCCCTCCGTTCCAAATTA 59.528 41.667 0.00 0.00 0.00 1.40
5459 6695 3.345508 ACTCCCTCCGTTCCAAATTAC 57.654 47.619 0.00 0.00 0.00 1.89
5460 6696 2.910977 ACTCCCTCCGTTCCAAATTACT 59.089 45.455 0.00 0.00 0.00 2.24
5461 6697 3.055312 ACTCCCTCCGTTCCAAATTACTC 60.055 47.826 0.00 0.00 0.00 2.59
5462 6698 2.907696 TCCCTCCGTTCCAAATTACTCA 59.092 45.455 0.00 0.00 0.00 3.41
5463 6699 3.521937 TCCCTCCGTTCCAAATTACTCAT 59.478 43.478 0.00 0.00 0.00 2.90
5464 6700 3.877508 CCCTCCGTTCCAAATTACTCATC 59.122 47.826 0.00 0.00 0.00 2.92
5465 6701 3.555956 CCTCCGTTCCAAATTACTCATCG 59.444 47.826 0.00 0.00 0.00 3.84
5466 6702 4.181578 CTCCGTTCCAAATTACTCATCGT 58.818 43.478 0.00 0.00 0.00 3.73
5467 6703 3.930229 TCCGTTCCAAATTACTCATCGTG 59.070 43.478 0.00 0.00 0.00 4.35
5468 6704 3.063452 CCGTTCCAAATTACTCATCGTGG 59.937 47.826 0.00 0.00 0.00 4.94
5469 6705 3.682858 CGTTCCAAATTACTCATCGTGGT 59.317 43.478 0.00 0.00 0.00 4.16
5470 6706 4.153475 CGTTCCAAATTACTCATCGTGGTT 59.847 41.667 0.00 0.00 0.00 3.67
5471 6707 5.334569 CGTTCCAAATTACTCATCGTGGTTT 60.335 40.000 0.00 0.00 0.00 3.27
5472 6708 6.443792 GTTCCAAATTACTCATCGTGGTTTT 58.556 36.000 0.00 0.00 0.00 2.43
5473 6709 7.571613 CGTTCCAAATTACTCATCGTGGTTTTA 60.572 37.037 0.00 0.00 0.00 1.52
5474 6710 7.372451 TCCAAATTACTCATCGTGGTTTTAG 57.628 36.000 0.00 0.00 0.00 1.85
5475 6711 6.027749 CCAAATTACTCATCGTGGTTTTAGC 58.972 40.000 0.00 0.00 0.00 3.09
5476 6712 5.813080 AATTACTCATCGTGGTTTTAGCC 57.187 39.130 0.00 0.00 0.00 3.93
5477 6713 2.851263 ACTCATCGTGGTTTTAGCCA 57.149 45.000 0.00 0.00 35.93 4.75
5484 6720 3.204505 TGGTTTTAGCCACGACGAG 57.795 52.632 0.00 0.00 32.81 4.18
5485 6721 0.390124 TGGTTTTAGCCACGACGAGT 59.610 50.000 0.00 0.00 32.81 4.18
5486 6722 1.612950 TGGTTTTAGCCACGACGAGTA 59.387 47.619 0.00 0.00 32.81 2.59
5487 6723 2.035704 TGGTTTTAGCCACGACGAGTAA 59.964 45.455 0.00 0.00 32.81 2.24
5488 6724 3.256558 GGTTTTAGCCACGACGAGTAAT 58.743 45.455 0.00 0.00 0.00 1.89
5489 6725 3.681417 GGTTTTAGCCACGACGAGTAATT 59.319 43.478 0.00 0.00 0.00 1.40
5490 6726 4.152938 GGTTTTAGCCACGACGAGTAATTT 59.847 41.667 0.00 0.00 0.00 1.82
5491 6727 4.914312 TTTAGCCACGACGAGTAATTTG 57.086 40.909 0.00 0.00 0.00 2.32
5492 6728 1.722011 AGCCACGACGAGTAATTTGG 58.278 50.000 0.00 0.00 0.00 3.28
5493 6729 1.274167 AGCCACGACGAGTAATTTGGA 59.726 47.619 0.00 0.00 0.00 3.53
5494 6730 2.070783 GCCACGACGAGTAATTTGGAA 58.929 47.619 0.00 0.00 0.00 3.53
5495 6731 2.159747 GCCACGACGAGTAATTTGGAAC 60.160 50.000 0.00 0.00 0.00 3.62
5496 6732 2.091588 CCACGACGAGTAATTTGGAACG 59.908 50.000 0.00 0.00 0.00 3.95
5497 6733 2.091588 CACGACGAGTAATTTGGAACGG 59.908 50.000 0.00 0.00 0.00 4.44
5498 6734 2.030007 ACGACGAGTAATTTGGAACGGA 60.030 45.455 0.00 0.00 0.00 4.69
5499 6735 2.597305 CGACGAGTAATTTGGAACGGAG 59.403 50.000 0.00 0.00 0.00 4.63
5500 6736 2.928116 GACGAGTAATTTGGAACGGAGG 59.072 50.000 0.00 0.00 0.00 4.30
5501 6737 2.277084 CGAGTAATTTGGAACGGAGGG 58.723 52.381 0.00 0.00 0.00 4.30
5502 6738 2.093869 CGAGTAATTTGGAACGGAGGGA 60.094 50.000 0.00 0.00 0.00 4.20
5570 6815 3.759581 ACATGGCTGATTCAGTTTCTGT 58.240 40.909 14.90 10.40 33.43 3.41
5588 6833 7.453752 AGTTTCTGTACTAGACCTTGTTCCATA 59.546 37.037 0.00 0.00 34.43 2.74
5589 6834 7.786046 TTCTGTACTAGACCTTGTTCCATAA 57.214 36.000 0.00 0.00 34.43 1.90
5597 6872 6.380079 AGACCTTGTTCCATAATCAGAACT 57.620 37.500 4.70 0.00 42.32 3.01
5610 6885 3.095262 AGAACTGCTGATGGGGAGT 57.905 52.632 0.00 0.00 39.50 3.85
5611 6886 0.617413 AGAACTGCTGATGGGGAGTG 59.383 55.000 0.00 0.00 37.91 3.51
5612 6887 0.326264 GAACTGCTGATGGGGAGTGT 59.674 55.000 0.00 0.00 37.91 3.55
5614 6889 1.077930 CTGCTGATGGGGAGTGTGG 60.078 63.158 0.00 0.00 0.00 4.17
5677 6954 1.594862 GAAAGAACCATGATCGAGCGG 59.405 52.381 0.00 0.00 0.00 5.52
5678 6955 0.811616 AAGAACCATGATCGAGCGGC 60.812 55.000 0.00 0.00 0.00 6.53
5750 7028 6.942532 AGAGTGTTAAGTGAATGCAGAAAA 57.057 33.333 0.00 0.00 0.00 2.29
5751 7029 6.963796 AGAGTGTTAAGTGAATGCAGAAAAG 58.036 36.000 0.00 0.00 0.00 2.27
5752 7030 6.016777 AGAGTGTTAAGTGAATGCAGAAAAGG 60.017 38.462 0.00 0.00 0.00 3.11
5797 7076 3.583806 GATCGCTTATCAGTCCAGGATG 58.416 50.000 0.00 0.00 34.46 3.51
5811 7090 2.229784 CCAGGATGAAGAAAGGTTGTGC 59.770 50.000 0.00 0.00 39.69 4.57
5852 7131 9.613428 ATGTACTTGTGCTGTGTTATTATATGT 57.387 29.630 0.00 0.00 0.00 2.29
5854 7133 9.916397 GTACTTGTGCTGTGTTATTATATGTTC 57.084 33.333 0.00 0.00 0.00 3.18
5858 7137 9.448438 TTGTGCTGTGTTATTATATGTTCTTCT 57.552 29.630 0.00 0.00 0.00 2.85
5859 7138 9.098355 TGTGCTGTGTTATTATATGTTCTTCTC 57.902 33.333 0.00 0.00 0.00 2.87
5860 7139 8.269424 GTGCTGTGTTATTATATGTTCTTCTCG 58.731 37.037 0.00 0.00 0.00 4.04
5861 7140 7.979537 TGCTGTGTTATTATATGTTCTTCTCGT 59.020 33.333 0.00 0.00 0.00 4.18
5862 7141 8.480853 GCTGTGTTATTATATGTTCTTCTCGTC 58.519 37.037 0.00 0.00 0.00 4.20
5863 7142 9.516314 CTGTGTTATTATATGTTCTTCTCGTCA 57.484 33.333 0.00 0.00 0.00 4.35
5906 7188 5.382618 AGGTTCAAGTTTGATGCTTCATC 57.617 39.130 2.75 0.13 40.88 2.92
5932 7214 9.075519 CATAAGTGTTTTATTATGGCTGTGTTG 57.924 33.333 0.00 0.00 36.28 3.33
6001 7283 7.096884 TCTACTTGTGCTGTGTTACTATAGG 57.903 40.000 4.43 0.00 0.00 2.57
6017 7300 6.903340 ACTATAGGGTTGGTCTTTTATGGT 57.097 37.500 4.43 0.00 0.00 3.55
6025 7308 3.988819 TGGTCTTTTATGGTTTTGCTGC 58.011 40.909 0.00 0.00 0.00 5.25
6031 7314 1.336131 TATGGTTTTGCTGCTTGCCA 58.664 45.000 0.00 4.82 42.00 4.92
6043 7326 1.589716 GCTTGCCAGCGTGATCCTTT 61.590 55.000 0.00 0.00 35.91 3.11
6044 7327 0.169672 CTTGCCAGCGTGATCCTTTG 59.830 55.000 0.00 0.00 0.00 2.77
6053 7338 0.385974 GTGATCCTTTGTGTGTGCGC 60.386 55.000 0.00 0.00 0.00 6.09
6064 7349 0.806492 TGTGTGCGCGTTAGTGTTGA 60.806 50.000 8.43 0.00 0.00 3.18
6067 7352 1.600013 TGTGCGCGTTAGTGTTGATTT 59.400 42.857 8.43 0.00 0.00 2.17
6084 7369 1.909700 TTTTGTGCATCCTGACCTCC 58.090 50.000 0.00 0.00 0.00 4.30
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 4.248058 CCATGCCAAAATTCAGAAGGAAC 58.752 43.478 0.00 0.00 38.60 3.62
175 186 2.647299 TGTGGTCATGGTATTGGGAAGT 59.353 45.455 0.00 0.00 0.00 3.01
187 198 5.474532 TCTGGAGAAAAAGAATGTGGTCATG 59.525 40.000 0.00 0.00 34.19 3.07
191 202 5.634118 TCATCTGGAGAAAAAGAATGTGGT 58.366 37.500 0.00 0.00 0.00 4.16
244 255 9.434559 CTTACTAAAAAGTAGAACAACAGTTGC 57.565 33.333 13.56 0.00 0.00 4.17
251 262 9.781633 TGTATGGCTTACTAAAAAGTAGAACAA 57.218 29.630 11.30 0.00 0.00 2.83
252 263 9.431887 CTGTATGGCTTACTAAAAAGTAGAACA 57.568 33.333 11.30 0.00 0.00 3.18
266 363 5.699097 TCCAAACAAACTGTATGGCTTAC 57.301 39.130 3.72 3.72 0.00 2.34
293 390 7.200434 ACATTAGTGTAACCAGATGATCCTT 57.800 36.000 0.00 0.00 37.80 3.36
294 391 6.814954 ACATTAGTGTAACCAGATGATCCT 57.185 37.500 0.00 0.00 37.80 3.24
311 408 6.367422 GTCAGGTTCACTCTTCTCAACATTAG 59.633 42.308 0.00 0.00 0.00 1.73
421 519 1.123928 AACCATAGGGAAGGAGCTCG 58.876 55.000 7.83 0.00 38.05 5.03
452 550 4.136051 CGGAGGGAGTACTAGTAAAGAGG 58.864 52.174 3.61 0.00 0.00 3.69
464 562 1.856629 AATTCCGAACGGAGGGAGTA 58.143 50.000 15.34 1.05 46.06 2.59
465 563 1.479730 GTAATTCCGAACGGAGGGAGT 59.520 52.381 15.34 4.12 46.06 3.85
466 564 1.755380 AGTAATTCCGAACGGAGGGAG 59.245 52.381 15.34 0.00 46.06 4.30
467 565 1.856629 AGTAATTCCGAACGGAGGGA 58.143 50.000 15.34 2.49 46.06 4.20
468 566 2.277084 CAAGTAATTCCGAACGGAGGG 58.723 52.381 15.34 0.00 46.06 4.30
469 567 2.928116 GACAAGTAATTCCGAACGGAGG 59.072 50.000 15.34 4.52 46.06 4.30
470 568 3.846360 AGACAAGTAATTCCGAACGGAG 58.154 45.455 15.34 5.60 46.06 4.63
471 569 3.671433 CGAGACAAGTAATTCCGAACGGA 60.671 47.826 12.04 12.04 43.52 4.69
472 570 2.597305 CGAGACAAGTAATTCCGAACGG 59.403 50.000 6.94 6.94 0.00 4.44
473 571 2.597305 CCGAGACAAGTAATTCCGAACG 59.403 50.000 0.00 0.00 0.00 3.95
474 572 3.841643 TCCGAGACAAGTAATTCCGAAC 58.158 45.455 0.00 0.00 0.00 3.95
475 573 4.524316 TTCCGAGACAAGTAATTCCGAA 57.476 40.909 0.00 0.00 0.00 4.30
476 574 4.524316 TTTCCGAGACAAGTAATTCCGA 57.476 40.909 0.00 0.00 0.00 4.55
477 575 4.034048 CCATTTCCGAGACAAGTAATTCCG 59.966 45.833 0.00 0.00 0.00 4.30
478 576 5.183228 TCCATTTCCGAGACAAGTAATTCC 58.817 41.667 0.00 0.00 0.00 3.01
479 577 6.316390 ACATCCATTTCCGAGACAAGTAATTC 59.684 38.462 0.00 0.00 0.00 2.17
480 578 6.180472 ACATCCATTTCCGAGACAAGTAATT 58.820 36.000 0.00 0.00 0.00 1.40
481 579 5.745227 ACATCCATTTCCGAGACAAGTAAT 58.255 37.500 0.00 0.00 0.00 1.89
482 580 5.160607 ACATCCATTTCCGAGACAAGTAA 57.839 39.130 0.00 0.00 0.00 2.24
483 581 4.819105 ACATCCATTTCCGAGACAAGTA 57.181 40.909 0.00 0.00 0.00 2.24
484 582 3.703001 ACATCCATTTCCGAGACAAGT 57.297 42.857 0.00 0.00 0.00 3.16
485 583 5.605534 AGATACATCCATTTCCGAGACAAG 58.394 41.667 0.00 0.00 0.00 3.16
486 584 5.614324 AGATACATCCATTTCCGAGACAA 57.386 39.130 0.00 0.00 0.00 3.18
487 585 6.724893 TTAGATACATCCATTTCCGAGACA 57.275 37.500 0.00 0.00 0.00 3.41
488 586 7.711339 AGTTTTAGATACATCCATTTCCGAGAC 59.289 37.037 0.00 0.00 0.00 3.36
489 587 7.792032 AGTTTTAGATACATCCATTTCCGAGA 58.208 34.615 0.00 0.00 0.00 4.04
490 588 9.542462 TTAGTTTTAGATACATCCATTTCCGAG 57.458 33.333 0.00 0.00 0.00 4.63
491 589 9.893634 TTTAGTTTTAGATACATCCATTTCCGA 57.106 29.630 0.00 0.00 0.00 4.55
517 615 9.664332 GCAGAAATGGATGTATCTAGATGTATT 57.336 33.333 15.79 4.32 0.00 1.89
518 616 7.978414 CGCAGAAATGGATGTATCTAGATGTAT 59.022 37.037 15.79 9.11 0.00 2.29
519 617 7.176690 TCGCAGAAATGGATGTATCTAGATGTA 59.823 37.037 15.79 4.44 0.00 2.29
520 618 6.015095 TCGCAGAAATGGATGTATCTAGATGT 60.015 38.462 15.79 1.25 0.00 3.06
521 619 6.309980 GTCGCAGAAATGGATGTATCTAGATG 59.690 42.308 15.79 0.00 39.69 2.90
522 620 6.015095 TGTCGCAGAAATGGATGTATCTAGAT 60.015 38.462 10.73 10.73 39.69 1.98
523 621 5.301805 TGTCGCAGAAATGGATGTATCTAGA 59.698 40.000 0.00 0.00 39.69 2.43
524 622 5.532557 TGTCGCAGAAATGGATGTATCTAG 58.467 41.667 0.00 0.00 39.69 2.43
525 623 5.529581 TGTCGCAGAAATGGATGTATCTA 57.470 39.130 0.00 0.00 39.69 1.98
526 624 4.406648 TGTCGCAGAAATGGATGTATCT 57.593 40.909 0.00 0.00 39.69 1.98
527 625 4.572389 ACTTGTCGCAGAAATGGATGTATC 59.428 41.667 0.00 0.00 39.69 2.24
528 626 4.517285 ACTTGTCGCAGAAATGGATGTAT 58.483 39.130 0.00 0.00 39.69 2.29
529 627 3.937814 ACTTGTCGCAGAAATGGATGTA 58.062 40.909 0.00 0.00 39.69 2.29
530 628 2.783135 ACTTGTCGCAGAAATGGATGT 58.217 42.857 0.00 0.00 39.69 3.06
531 629 4.944962 TTACTTGTCGCAGAAATGGATG 57.055 40.909 0.00 0.00 39.69 3.51
532 630 5.066505 GGAATTACTTGTCGCAGAAATGGAT 59.933 40.000 0.00 0.00 39.69 3.41
533 631 4.394920 GGAATTACTTGTCGCAGAAATGGA 59.605 41.667 0.00 0.00 39.69 3.41
534 632 4.662145 GGAATTACTTGTCGCAGAAATGG 58.338 43.478 0.00 0.00 39.69 3.16
535 633 4.092821 TCGGAATTACTTGTCGCAGAAATG 59.907 41.667 0.00 0.00 39.69 2.32
536 634 4.250464 TCGGAATTACTTGTCGCAGAAAT 58.750 39.130 0.00 0.00 39.69 2.17
537 635 3.655486 TCGGAATTACTTGTCGCAGAAA 58.345 40.909 0.00 0.00 39.69 2.52
538 636 3.306917 TCGGAATTACTTGTCGCAGAA 57.693 42.857 0.00 0.00 39.69 3.02
539 637 3.306917 TTCGGAATTACTTGTCGCAGA 57.693 42.857 0.00 0.00 0.00 4.26
540 638 3.242413 CCATTCGGAATTACTTGTCGCAG 60.242 47.826 0.00 0.00 0.00 5.18
541 639 2.675844 CCATTCGGAATTACTTGTCGCA 59.324 45.455 0.00 0.00 0.00 5.10
542 640 2.933906 TCCATTCGGAATTACTTGTCGC 59.066 45.455 0.00 0.00 38.83 5.19
543 641 3.555956 CCTCCATTCGGAATTACTTGTCG 59.444 47.826 0.00 0.00 42.21 4.35
544 642 3.877508 CCCTCCATTCGGAATTACTTGTC 59.122 47.826 0.00 0.00 42.21 3.18
545 643 3.521937 TCCCTCCATTCGGAATTACTTGT 59.478 43.478 0.00 0.00 42.21 3.16
546 644 4.130118 CTCCCTCCATTCGGAATTACTTG 58.870 47.826 0.00 0.00 42.21 3.16
547 645 3.780850 ACTCCCTCCATTCGGAATTACTT 59.219 43.478 0.00 0.00 42.21 2.24
548 646 3.385115 ACTCCCTCCATTCGGAATTACT 58.615 45.455 0.00 0.00 42.21 2.24
549 647 3.840124 ACTCCCTCCATTCGGAATTAC 57.160 47.619 0.00 0.00 42.21 1.89
550 648 3.644738 GGTACTCCCTCCATTCGGAATTA 59.355 47.826 0.00 0.00 42.21 1.40
551 649 2.438392 GGTACTCCCTCCATTCGGAATT 59.562 50.000 0.00 0.00 42.21 2.17
552 650 2.047830 GGTACTCCCTCCATTCGGAAT 58.952 52.381 0.00 0.00 42.21 3.01
553 651 1.007963 AGGTACTCCCTCCATTCGGAA 59.992 52.381 0.00 0.00 40.71 4.30
554 652 0.635009 AGGTACTCCCTCCATTCGGA 59.365 55.000 0.00 0.00 40.71 4.55
555 653 1.497161 AAGGTACTCCCTCCATTCGG 58.503 55.000 0.00 0.00 45.47 4.30
556 654 3.629142 AAAAGGTACTCCCTCCATTCG 57.371 47.619 0.00 0.00 45.47 3.34
557 655 4.017126 CCAAAAAGGTACTCCCTCCATTC 58.983 47.826 0.00 0.00 45.47 2.67
558 656 3.245622 CCCAAAAAGGTACTCCCTCCATT 60.246 47.826 0.00 0.00 45.47 3.16
559 657 2.311841 CCCAAAAAGGTACTCCCTCCAT 59.688 50.000 0.00 0.00 45.47 3.41
560 658 1.708551 CCCAAAAAGGTACTCCCTCCA 59.291 52.381 0.00 0.00 45.47 3.86
561 659 1.709115 ACCCAAAAAGGTACTCCCTCC 59.291 52.381 0.00 0.00 45.47 4.30
562 660 3.520691 AACCCAAAAAGGTACTCCCTC 57.479 47.619 0.00 0.00 45.47 4.30
564 662 2.036733 GCAAACCCAAAAAGGTACTCCC 59.963 50.000 0.00 0.00 40.05 4.30
565 663 2.963101 AGCAAACCCAAAAAGGTACTCC 59.037 45.455 0.00 0.00 40.05 3.85
566 664 3.243737 CCAGCAAACCCAAAAAGGTACTC 60.244 47.826 0.00 0.00 40.05 2.59
586 684 5.905331 AGATCCATAAAGTACCACATCTCCA 59.095 40.000 0.00 0.00 0.00 3.86
752 1146 6.348868 CGGACGGAGGGAGTAGTAAAATATAC 60.349 46.154 0.00 0.00 0.00 1.47
766 1160 0.032813 AGTATTTCCGGACGGAGGGA 60.033 55.000 13.64 4.95 46.06 4.20
767 1161 0.828677 AAGTATTTCCGGACGGAGGG 59.171 55.000 13.64 0.00 46.06 4.30
768 1162 1.206371 ACAAGTATTTCCGGACGGAGG 59.794 52.381 13.64 0.00 46.06 4.30
769 1163 2.094390 TGACAAGTATTTCCGGACGGAG 60.094 50.000 13.64 3.15 46.06 4.63
770 1164 1.894466 TGACAAGTATTTCCGGACGGA 59.106 47.619 1.83 9.76 43.52 4.69
771 1165 2.373540 TGACAAGTATTTCCGGACGG 57.626 50.000 1.83 3.96 0.00 4.79
772 1166 3.517602 TGATGACAAGTATTTCCGGACG 58.482 45.455 1.83 0.00 0.00 4.79
773 1167 5.873179 TTTGATGACAAGTATTTCCGGAC 57.127 39.130 1.83 0.00 37.32 4.79
774 1168 6.657117 TCATTTTGATGACAAGTATTTCCGGA 59.343 34.615 0.00 0.00 37.32 5.14
775 1169 6.851609 TCATTTTGATGACAAGTATTTCCGG 58.148 36.000 0.00 0.00 37.32 5.14
776 1170 8.915871 ATTCATTTTGATGACAAGTATTTCCG 57.084 30.769 0.00 0.00 37.32 4.30
783 1177 8.096414 CCCCTTTTATTCATTTTGATGACAAGT 58.904 33.333 0.00 0.00 37.32 3.16
784 1178 8.313292 TCCCCTTTTATTCATTTTGATGACAAG 58.687 33.333 0.00 0.00 37.32 3.16
785 1179 8.200024 TCCCCTTTTATTCATTTTGATGACAA 57.800 30.769 0.00 0.00 0.00 3.18
786 1180 7.789202 TCCCCTTTTATTCATTTTGATGACA 57.211 32.000 0.00 0.00 0.00 3.58
787 1181 8.260114 ACATCCCCTTTTATTCATTTTGATGAC 58.740 33.333 0.00 0.00 32.39 3.06
788 1182 8.378115 ACATCCCCTTTTATTCATTTTGATGA 57.622 30.769 0.00 0.00 32.39 2.92
791 1185 9.713684 AGATACATCCCCTTTTATTCATTTTGA 57.286 29.630 0.00 0.00 0.00 2.69
796 1190 8.314751 CGTCTAGATACATCCCCTTTTATTCAT 58.685 37.037 0.00 0.00 0.00 2.57
797 1191 7.289317 ACGTCTAGATACATCCCCTTTTATTCA 59.711 37.037 0.00 0.00 0.00 2.57
798 1192 7.668492 ACGTCTAGATACATCCCCTTTTATTC 58.332 38.462 0.00 0.00 0.00 1.75
799 1193 7.613551 ACGTCTAGATACATCCCCTTTTATT 57.386 36.000 0.00 0.00 0.00 1.40
800 1194 8.896722 ATACGTCTAGATACATCCCCTTTTAT 57.103 34.615 0.00 0.00 0.00 1.40
801 1195 8.716674 AATACGTCTAGATACATCCCCTTTTA 57.283 34.615 0.00 0.00 0.00 1.52
802 1196 7.613551 AATACGTCTAGATACATCCCCTTTT 57.386 36.000 0.00 0.00 0.00 2.27
803 1197 7.613551 AAATACGTCTAGATACATCCCCTTT 57.386 36.000 0.00 0.00 0.00 3.11
804 1198 7.613551 AAAATACGTCTAGATACATCCCCTT 57.386 36.000 0.00 0.00 0.00 3.95
805 1199 7.949006 ACTAAAATACGTCTAGATACATCCCCT 59.051 37.037 0.00 0.00 0.00 4.79
806 1200 8.120140 ACTAAAATACGTCTAGATACATCCCC 57.880 38.462 0.00 0.00 0.00 4.81
840 1234 9.486123 TGTCATCAAAATGGATAAAAAGGGATA 57.514 29.630 0.00 0.00 33.42 2.59
841 1235 8.378115 TGTCATCAAAATGGATAAAAAGGGAT 57.622 30.769 0.00 0.00 33.42 3.85
842 1236 7.789202 TGTCATCAAAATGGATAAAAAGGGA 57.211 32.000 0.00 0.00 33.42 4.20
843 1237 8.096414 ACTTGTCATCAAAATGGATAAAAAGGG 58.904 33.333 0.00 0.00 33.42 3.95
844 1238 8.928733 CACTTGTCATCAAAATGGATAAAAAGG 58.071 33.333 0.00 0.00 33.42 3.11
845 1239 9.480053 ACACTTGTCATCAAAATGGATAAAAAG 57.520 29.630 0.00 0.00 33.42 2.27
846 1240 9.829507 AACACTTGTCATCAAAATGGATAAAAA 57.170 25.926 0.00 0.00 33.42 1.94
847 1241 9.829507 AAACACTTGTCATCAAAATGGATAAAA 57.170 25.926 0.00 0.00 33.42 1.52
848 1242 9.829507 AAAACACTTGTCATCAAAATGGATAAA 57.170 25.926 0.00 0.00 33.42 1.40
849 1243 9.474920 GAAAACACTTGTCATCAAAATGGATAA 57.525 29.630 0.00 0.00 33.42 1.75
850 1244 7.807433 CGAAAACACTTGTCATCAAAATGGATA 59.193 33.333 0.00 0.00 33.42 2.59
851 1245 6.642131 CGAAAACACTTGTCATCAAAATGGAT 59.358 34.615 0.00 0.00 33.42 3.41
852 1246 5.976534 CGAAAACACTTGTCATCAAAATGGA 59.023 36.000 0.00 0.00 33.42 3.41
853 1247 5.175491 CCGAAAACACTTGTCATCAAAATGG 59.825 40.000 0.00 0.00 33.42 3.16
854 1248 5.976534 TCCGAAAACACTTGTCATCAAAATG 59.023 36.000 0.00 0.00 32.87 2.32
855 1249 5.977129 GTCCGAAAACACTTGTCATCAAAAT 59.023 36.000 0.00 0.00 32.87 1.82
856 1250 5.336744 GTCCGAAAACACTTGTCATCAAAA 58.663 37.500 0.00 0.00 32.87 2.44
857 1251 4.495019 CGTCCGAAAACACTTGTCATCAAA 60.495 41.667 0.00 0.00 32.87 2.69
858 1252 3.001838 CGTCCGAAAACACTTGTCATCAA 59.998 43.478 0.00 0.00 0.00 2.57
859 1253 2.542178 CGTCCGAAAACACTTGTCATCA 59.458 45.455 0.00 0.00 0.00 3.07
860 1254 2.096417 CCGTCCGAAAACACTTGTCATC 60.096 50.000 0.00 0.00 0.00 2.92
861 1255 1.871039 CCGTCCGAAAACACTTGTCAT 59.129 47.619 0.00 0.00 0.00 3.06
862 1256 1.134759 TCCGTCCGAAAACACTTGTCA 60.135 47.619 0.00 0.00 0.00 3.58
863 1257 1.525619 CTCCGTCCGAAAACACTTGTC 59.474 52.381 0.00 0.00 0.00 3.18
864 1258 1.578583 CTCCGTCCGAAAACACTTGT 58.421 50.000 0.00 0.00 0.00 3.16
865 1259 0.865769 CCTCCGTCCGAAAACACTTG 59.134 55.000 0.00 0.00 0.00 3.16
866 1260 0.250166 CCCTCCGTCCGAAAACACTT 60.250 55.000 0.00 0.00 0.00 3.16
867 1261 1.117142 TCCCTCCGTCCGAAAACACT 61.117 55.000 0.00 0.00 0.00 3.55
868 1262 0.669625 CTCCCTCCGTCCGAAAACAC 60.670 60.000 0.00 0.00 0.00 3.32
869 1263 1.117142 ACTCCCTCCGTCCGAAAACA 61.117 55.000 0.00 0.00 0.00 2.83
870 1264 0.890683 TACTCCCTCCGTCCGAAAAC 59.109 55.000 0.00 0.00 0.00 2.43
871 1265 1.180029 CTACTCCCTCCGTCCGAAAA 58.820 55.000 0.00 0.00 0.00 2.29
872 1266 0.038744 ACTACTCCCTCCGTCCGAAA 59.961 55.000 0.00 0.00 0.00 3.46
873 1267 0.911769 TACTACTCCCTCCGTCCGAA 59.088 55.000 0.00 0.00 0.00 4.30
874 1268 0.911769 TTACTACTCCCTCCGTCCGA 59.088 55.000 0.00 0.00 0.00 4.55
875 1269 1.978454 ATTACTACTCCCTCCGTCCG 58.022 55.000 0.00 0.00 0.00 4.79
876 1270 4.277921 CACTAATTACTACTCCCTCCGTCC 59.722 50.000 0.00 0.00 0.00 4.79
877 1271 4.886489 ACACTAATTACTACTCCCTCCGTC 59.114 45.833 0.00 0.00 0.00 4.79
878 1272 4.864726 ACACTAATTACTACTCCCTCCGT 58.135 43.478 0.00 0.00 0.00 4.69
879 1273 5.848833 AACACTAATTACTACTCCCTCCG 57.151 43.478 0.00 0.00 0.00 4.63
880 1274 5.816258 GCAAACACTAATTACTACTCCCTCC 59.184 44.000 0.00 0.00 0.00 4.30
881 1275 5.816258 GGCAAACACTAATTACTACTCCCTC 59.184 44.000 0.00 0.00 0.00 4.30
882 1276 5.626116 CGGCAAACACTAATTACTACTCCCT 60.626 44.000 0.00 0.00 0.00 4.20
883 1277 4.569564 CGGCAAACACTAATTACTACTCCC 59.430 45.833 0.00 0.00 0.00 4.30
884 1278 4.033702 GCGGCAAACACTAATTACTACTCC 59.966 45.833 0.00 0.00 0.00 3.85
885 1279 4.868734 AGCGGCAAACACTAATTACTACTC 59.131 41.667 1.45 0.00 0.00 2.59
886 1280 4.828829 AGCGGCAAACACTAATTACTACT 58.171 39.130 1.45 0.00 0.00 2.57
887 1281 5.350640 AGAAGCGGCAAACACTAATTACTAC 59.649 40.000 1.45 0.00 0.00 2.73
888 1282 5.484715 AGAAGCGGCAAACACTAATTACTA 58.515 37.500 1.45 0.00 0.00 1.82
889 1283 4.324267 AGAAGCGGCAAACACTAATTACT 58.676 39.130 1.45 0.00 0.00 2.24
890 1284 4.153475 TGAGAAGCGGCAAACACTAATTAC 59.847 41.667 1.45 0.00 0.00 1.89
986 1380 2.942752 GCAGGCATTGAGGAAGACATCA 60.943 50.000 0.00 0.00 34.99 3.07
1034 1428 2.356667 CCCTTTCCTGGGTGCTCC 59.643 66.667 0.00 0.00 42.25 4.70
1056 1450 1.069049 GCATCAAGGGTTGTTTGTGCT 59.931 47.619 0.00 0.00 33.66 4.40
1185 1579 1.833630 TGCTGCAAGTAGGCTATGACT 59.166 47.619 0.00 0.00 35.30 3.41
1290 1684 0.878416 TAAGCATTTCTGGCGCGTTT 59.122 45.000 8.43 0.00 36.08 3.60
1339 1733 2.998949 GAGCCTTGGGGGATCGTT 59.001 61.111 0.00 0.00 40.91 3.85
1515 1909 3.251004 GCTCAAAGTCTACCACCAAACAG 59.749 47.826 0.00 0.00 0.00 3.16
1564 1958 4.355720 CAAGGCCCCAGCAGCAGA 62.356 66.667 0.00 0.00 42.56 4.26
1644 2038 3.464907 CACAGTATTGCATAGCAGCTCT 58.535 45.455 0.00 0.00 40.61 4.09
1818 2212 1.923356 TCATGAAAAGGAACCTGGCC 58.077 50.000 0.00 0.00 0.00 5.36
1827 2221 4.442073 CGCACTTTGTTCTTCATGAAAAGG 59.558 41.667 17.08 9.12 36.30 3.11
1870 2264 5.869649 TCGATGACCTTTATGGATCTTGA 57.130 39.130 0.00 0.00 39.71 3.02
1935 2329 3.054503 CTGTGTGCTGCCCTGAGC 61.055 66.667 0.00 0.00 44.14 4.26
2202 2596 4.939948 TTTTTCGCGTAATTGTTTCTGC 57.060 36.364 5.77 0.00 0.00 4.26
2237 2631 1.798223 TGTCGGAGAGAATTGTTTGCG 59.202 47.619 0.68 0.68 36.95 4.85
2344 2738 3.214328 GCCATACTTTGTCCCCATACAG 58.786 50.000 0.00 0.00 0.00 2.74
2354 2748 0.676782 GCCCAGACGCCATACTTTGT 60.677 55.000 0.00 0.00 0.00 2.83
2503 2897 1.303236 CTGCCATCCCACAAACCGA 60.303 57.895 0.00 0.00 0.00 4.69
2575 2969 3.285484 CACCTCCCCATCTGATTTCTTG 58.715 50.000 0.00 0.00 0.00 3.02
2607 3001 1.337384 TGTCATCCTGGTCCGATGGG 61.337 60.000 6.85 0.00 38.13 4.00
3071 3465 7.153315 CGGGGAGGTAAATAGATAGAGAAAAC 58.847 42.308 0.00 0.00 0.00 2.43
3094 3488 1.138464 GGAGGAAGGTAAAGTAGGCGG 59.862 57.143 0.00 0.00 0.00 6.13
3120 3514 9.121517 CAACAAATGAAGATAACACAATGAGTC 57.878 33.333 0.00 0.00 0.00 3.36
3122 3516 9.850628 ATCAACAAATGAAGATAACACAATGAG 57.149 29.630 0.00 0.00 42.54 2.90
3175 3571 1.790755 AAGCAGTTGACGCGATAACA 58.209 45.000 24.01 12.45 0.00 2.41
3181 3577 0.579630 TTGTGTAAGCAGTTGACGCG 59.420 50.000 3.53 3.53 0.00 6.01
3218 3614 5.235516 ACCCATGAAACGATCGATATTACC 58.764 41.667 24.34 4.00 0.00 2.85
3233 3629 8.188139 GCGAAAAATTTATTAGAGACCCATGAA 58.812 33.333 0.00 0.00 0.00 2.57
3253 3649 1.952990 TGCCTGTTTGATCAGCGAAAA 59.047 42.857 0.00 0.00 34.47 2.29
3761 4157 2.708216 TGTTCACTGACAGAAGGCAA 57.292 45.000 10.08 0.00 0.00 4.52
3877 4273 0.601558 TTTTAGCGACGTCTGCTCCT 59.398 50.000 28.98 14.77 42.85 3.69
3890 4286 4.876125 AGAAAGCTTTCAGCCTTTTTAGC 58.124 39.130 34.39 9.38 43.77 3.09
3978 4374 7.194607 TCTGTTCTTCATTCAAATCTGTGTC 57.805 36.000 0.00 0.00 0.00 3.67
4034 4430 4.672801 GCAAGTATCTTGTTTAGCTGGTGC 60.673 45.833 0.00 0.00 40.05 5.01
4124 4520 4.332819 AGCCATAAGTAAACATGAGAACGC 59.667 41.667 0.00 0.00 0.00 4.84
4198 4594 3.446442 AGCAGGTGAAATGAGGACAAT 57.554 42.857 0.00 0.00 0.00 2.71
4206 4602 2.232941 AGGCATGAAAGCAGGTGAAATG 59.767 45.455 0.00 0.00 35.83 2.32
4271 4667 8.516234 AGTTCAACAAGTTGTGTAAATGTAACA 58.484 29.630 9.79 0.00 40.60 2.41
4544 4940 2.118076 CCTTTTCCCTGGCAGGCA 59.882 61.111 28.51 11.59 32.73 4.75
4622 5018 0.526524 GGATCTGCTGGAGTCGAACG 60.527 60.000 0.00 0.00 0.00 3.95
4646 5042 7.484975 ACTTCACTGAAATAGATAGGAAGTCG 58.515 38.462 0.00 0.00 0.00 4.18
4761 5157 0.461339 ATTGCACGACCGATGTACCC 60.461 55.000 0.00 0.00 0.00 3.69
4815 5214 2.507471 ACTAGGCATTCCCAGAAGAAGG 59.493 50.000 0.00 0.00 35.39 3.46
4822 5221 1.492176 ACCATCACTAGGCATTCCCAG 59.508 52.381 0.00 0.00 35.39 4.45
4832 5232 7.155328 ACAGAGACAAAAGTAACCATCACTAG 58.845 38.462 0.00 0.00 0.00 2.57
4845 5245 7.496529 TCCTGAAAACATACAGAGACAAAAG 57.503 36.000 0.00 0.00 36.38 2.27
4884 5284 2.494530 GCTCTGCCGGGACTCCTAG 61.495 68.421 2.18 0.00 0.00 3.02
4932 5332 4.154347 CTCCTCTGACTGCCCCGC 62.154 72.222 0.00 0.00 0.00 6.13
4935 5335 3.086600 CCCCTCCTCTGACTGCCC 61.087 72.222 0.00 0.00 0.00 5.36
4936 5336 1.920835 AACCCCTCCTCTGACTGCC 60.921 63.158 0.00 0.00 0.00 4.85
4952 5352 0.617820 TAGAGACCAGGAGGCCCAAC 60.618 60.000 0.00 0.00 39.06 3.77
5031 5431 1.519455 CGGCGGTGAGGATGAAGAC 60.519 63.158 0.00 0.00 0.00 3.01
5074 5474 1.372087 GCTTCTTCATCACTGCCCCG 61.372 60.000 0.00 0.00 0.00 5.73
5077 5477 1.093159 CTGGCTTCTTCATCACTGCC 58.907 55.000 0.00 0.00 40.62 4.85
5081 5481 1.527034 TGCACTGGCTTCTTCATCAC 58.473 50.000 0.00 0.00 41.91 3.06
5102 5502 4.213482 CACATACCATCTGATGAGCATGTG 59.787 45.833 26.27 26.27 37.27 3.21
5148 5550 2.184448 CAAAAGAAACACACCGCACTG 58.816 47.619 0.00 0.00 0.00 3.66
5154 5556 2.553079 TGCGACAAAAGAAACACACC 57.447 45.000 0.00 0.00 0.00 4.16
5171 5573 1.005394 ATGCAAAGCCAGCAGTTGC 60.005 52.632 18.74 18.74 46.36 4.17
5198 5600 8.868522 TTTGATGGAGTATGAATCAAGAAAGT 57.131 30.769 0.00 0.00 40.40 2.66
5234 5636 0.739462 TTCGGCTGTGCGTTCCATAG 60.739 55.000 0.00 0.00 35.92 2.23
5247 5649 1.001641 AAGGCTGCAGATTTCGGCT 60.002 52.632 20.43 4.49 37.92 5.52
5250 5652 1.167851 TTGGAAGGCTGCAGATTTCG 58.832 50.000 20.43 0.00 0.00 3.46
5315 5717 5.414765 TCATTCAGCGTCATATCCGTAGTAT 59.585 40.000 0.00 0.00 0.00 2.12
5316 5718 4.758165 TCATTCAGCGTCATATCCGTAGTA 59.242 41.667 0.00 0.00 0.00 1.82
5317 5719 3.568430 TCATTCAGCGTCATATCCGTAGT 59.432 43.478 0.00 0.00 0.00 2.73
5327 5730 1.341209 ACACACTCTCATTCAGCGTCA 59.659 47.619 0.00 0.00 0.00 4.35
5341 5744 6.828785 GGTGAAAAATATCCTATCCACACACT 59.171 38.462 0.00 0.00 0.00 3.55
5343 5746 6.969043 AGGTGAAAAATATCCTATCCACACA 58.031 36.000 0.00 0.00 0.00 3.72
5346 5749 7.224297 TGCTAGGTGAAAAATATCCTATCCAC 58.776 38.462 0.00 0.00 32.99 4.02
5377 6613 5.830000 AAAGTTTCTACCAACAACCAGAC 57.170 39.130 0.00 0.00 0.00 3.51
5380 6616 7.558444 AGTGATAAAAGTTTCTACCAACAACCA 59.442 33.333 0.00 0.00 0.00 3.67
5381 6617 7.860872 CAGTGATAAAAGTTTCTACCAACAACC 59.139 37.037 0.00 0.00 0.00 3.77
5382 6618 7.860872 CCAGTGATAAAAGTTTCTACCAACAAC 59.139 37.037 0.00 0.00 0.00 3.32
5383 6619 7.776030 TCCAGTGATAAAAGTTTCTACCAACAA 59.224 33.333 0.00 0.00 0.00 2.83
5384 6620 7.284074 TCCAGTGATAAAAGTTTCTACCAACA 58.716 34.615 0.00 0.00 0.00 3.33
5386 6622 8.754991 TTTCCAGTGATAAAAGTTTCTACCAA 57.245 30.769 0.00 0.00 0.00 3.67
5404 6640 6.264067 CCAGAGAAAACTTCTTCATTTCCAGT 59.736 38.462 0.00 0.00 40.87 4.00
5408 6644 7.362487 GGGATCCAGAGAAAACTTCTTCATTTC 60.362 40.741 15.23 0.00 40.87 2.17
5413 6649 4.697828 GTGGGATCCAGAGAAAACTTCTTC 59.302 45.833 15.23 0.00 40.87 2.87
5437 6673 4.720273 AGTAATTTGGAACGGAGGGAGTAT 59.280 41.667 0.00 0.00 0.00 2.12
5438 6674 4.098894 AGTAATTTGGAACGGAGGGAGTA 58.901 43.478 0.00 0.00 0.00 2.59
5439 6675 2.910977 AGTAATTTGGAACGGAGGGAGT 59.089 45.455 0.00 0.00 0.00 3.85
5440 6676 3.055385 TGAGTAATTTGGAACGGAGGGAG 60.055 47.826 0.00 0.00 0.00 4.30
5441 6677 2.907696 TGAGTAATTTGGAACGGAGGGA 59.092 45.455 0.00 0.00 0.00 4.20
5442 6678 3.343941 TGAGTAATTTGGAACGGAGGG 57.656 47.619 0.00 0.00 0.00 4.30
5443 6679 3.555956 CGATGAGTAATTTGGAACGGAGG 59.444 47.826 0.00 0.00 0.00 4.30
5444 6680 4.032900 CACGATGAGTAATTTGGAACGGAG 59.967 45.833 0.00 0.00 0.00 4.63
5445 6681 3.930229 CACGATGAGTAATTTGGAACGGA 59.070 43.478 0.00 0.00 0.00 4.69
5446 6682 3.063452 CCACGATGAGTAATTTGGAACGG 59.937 47.826 0.00 0.00 0.00 4.44
5447 6683 3.682858 ACCACGATGAGTAATTTGGAACG 59.317 43.478 0.00 0.00 0.00 3.95
5448 6684 5.622770 AACCACGATGAGTAATTTGGAAC 57.377 39.130 0.00 0.00 0.00 3.62
5449 6685 6.642707 AAAACCACGATGAGTAATTTGGAA 57.357 33.333 0.00 0.00 0.00 3.53
5450 6686 6.128117 GCTAAAACCACGATGAGTAATTTGGA 60.128 38.462 0.00 0.00 0.00 3.53
5451 6687 6.027749 GCTAAAACCACGATGAGTAATTTGG 58.972 40.000 0.00 0.00 0.00 3.28
5452 6688 6.027749 GGCTAAAACCACGATGAGTAATTTG 58.972 40.000 0.00 0.00 0.00 2.32
5453 6689 5.708230 TGGCTAAAACCACGATGAGTAATTT 59.292 36.000 0.00 0.00 33.75 1.82
5454 6690 5.250200 TGGCTAAAACCACGATGAGTAATT 58.750 37.500 0.00 0.00 33.75 1.40
5455 6691 4.839121 TGGCTAAAACCACGATGAGTAAT 58.161 39.130 0.00 0.00 33.75 1.89
5456 6692 4.274602 TGGCTAAAACCACGATGAGTAA 57.725 40.909 0.00 0.00 33.75 2.24
5457 6693 3.965379 TGGCTAAAACCACGATGAGTA 57.035 42.857 0.00 0.00 33.75 2.59
5458 6694 2.851263 TGGCTAAAACCACGATGAGT 57.149 45.000 0.00 0.00 33.75 3.41
5466 6702 0.390124 ACTCGTCGTGGCTAAAACCA 59.610 50.000 0.00 0.00 37.38 3.67
5467 6703 2.352503 TACTCGTCGTGGCTAAAACC 57.647 50.000 0.00 0.00 0.00 3.27
5468 6704 4.916099 AATTACTCGTCGTGGCTAAAAC 57.084 40.909 0.00 0.00 0.00 2.43
5469 6705 4.152759 CCAAATTACTCGTCGTGGCTAAAA 59.847 41.667 0.00 0.00 0.00 1.52
5470 6706 3.680937 CCAAATTACTCGTCGTGGCTAAA 59.319 43.478 0.00 0.00 0.00 1.85
5471 6707 3.056678 TCCAAATTACTCGTCGTGGCTAA 60.057 43.478 0.00 0.00 0.00 3.09
5472 6708 2.492881 TCCAAATTACTCGTCGTGGCTA 59.507 45.455 0.00 0.00 0.00 3.93
5473 6709 1.274167 TCCAAATTACTCGTCGTGGCT 59.726 47.619 0.00 0.00 0.00 4.75
5474 6710 1.717194 TCCAAATTACTCGTCGTGGC 58.283 50.000 0.00 0.00 0.00 5.01
5475 6711 2.091588 CGTTCCAAATTACTCGTCGTGG 59.908 50.000 0.00 0.00 0.00 4.94
5476 6712 2.091588 CCGTTCCAAATTACTCGTCGTG 59.908 50.000 0.00 0.00 0.00 4.35
5477 6713 2.030007 TCCGTTCCAAATTACTCGTCGT 60.030 45.455 0.00 0.00 0.00 4.34
5478 6714 2.597305 CTCCGTTCCAAATTACTCGTCG 59.403 50.000 0.00 0.00 0.00 5.12
5479 6715 2.928116 CCTCCGTTCCAAATTACTCGTC 59.072 50.000 0.00 0.00 0.00 4.20
5480 6716 2.354403 CCCTCCGTTCCAAATTACTCGT 60.354 50.000 0.00 0.00 0.00 4.18
5481 6717 2.093869 TCCCTCCGTTCCAAATTACTCG 60.094 50.000 0.00 0.00 0.00 4.18
5482 6718 3.055312 ACTCCCTCCGTTCCAAATTACTC 60.055 47.826 0.00 0.00 0.00 2.59
5483 6719 2.910977 ACTCCCTCCGTTCCAAATTACT 59.089 45.455 0.00 0.00 0.00 2.24
5484 6720 3.345508 ACTCCCTCCGTTCCAAATTAC 57.654 47.619 0.00 0.00 0.00 1.89
5485 6721 4.098894 AGTACTCCCTCCGTTCCAAATTA 58.901 43.478 0.00 0.00 0.00 1.40
5486 6722 2.910977 AGTACTCCCTCCGTTCCAAATT 59.089 45.455 0.00 0.00 0.00 1.82
5487 6723 2.547990 AGTACTCCCTCCGTTCCAAAT 58.452 47.619 0.00 0.00 0.00 2.32
5488 6724 2.019807 AGTACTCCCTCCGTTCCAAA 57.980 50.000 0.00 0.00 0.00 3.28
5489 6725 2.905415 TAGTACTCCCTCCGTTCCAA 57.095 50.000 0.00 0.00 0.00 3.53
5490 6726 3.393426 AATAGTACTCCCTCCGTTCCA 57.607 47.619 0.00 0.00 0.00 3.53
5491 6727 4.442612 GGAAAATAGTACTCCCTCCGTTCC 60.443 50.000 0.00 0.95 0.00 3.62
5492 6728 4.691175 GGAAAATAGTACTCCCTCCGTTC 58.309 47.826 0.00 0.00 0.00 3.95
5493 6729 3.131755 CGGAAAATAGTACTCCCTCCGTT 59.868 47.826 19.71 1.26 39.54 4.44
5494 6730 2.692041 CGGAAAATAGTACTCCCTCCGT 59.308 50.000 19.71 0.00 39.54 4.69
5495 6731 3.366440 CGGAAAATAGTACTCCCTCCG 57.634 52.381 16.48 16.48 38.49 4.63
5496 6732 5.136105 TCTACGGAAAATAGTACTCCCTCC 58.864 45.833 0.00 0.84 0.00 4.30
5497 6733 5.827267 ACTCTACGGAAAATAGTACTCCCTC 59.173 44.000 0.00 0.00 0.00 4.30
5498 6734 5.764432 ACTCTACGGAAAATAGTACTCCCT 58.236 41.667 0.00 0.00 0.00 4.20
5499 6735 5.009510 GGACTCTACGGAAAATAGTACTCCC 59.990 48.000 0.00 0.00 0.00 4.30
5500 6736 5.827267 AGGACTCTACGGAAAATAGTACTCC 59.173 44.000 0.00 0.00 23.90 3.85
5501 6737 6.940831 AGGACTCTACGGAAAATAGTACTC 57.059 41.667 0.00 0.00 23.90 2.59
5502 6738 8.993404 ATAAGGACTCTACGGAAAATAGTACT 57.007 34.615 0.00 0.00 32.64 2.73
5532 6777 4.555511 GCCATGTTTGTCACTCTTCTGAAC 60.556 45.833 0.00 0.00 0.00 3.18
5597 6872 3.080641 CCACACTCCCCATCAGCA 58.919 61.111 0.00 0.00 0.00 4.41
5607 6882 1.000938 CTTCAGCAAAAGGCCACACTC 60.001 52.381 5.01 0.00 46.50 3.51
5608 6883 1.035139 CTTCAGCAAAAGGCCACACT 58.965 50.000 5.01 0.00 46.50 3.55
5609 6884 1.032014 TCTTCAGCAAAAGGCCACAC 58.968 50.000 5.01 0.00 46.50 3.82
5610 6885 1.774110 TTCTTCAGCAAAAGGCCACA 58.226 45.000 5.01 0.00 46.50 4.17
5611 6886 3.391506 AATTCTTCAGCAAAAGGCCAC 57.608 42.857 5.01 0.00 46.50 5.01
5612 6887 4.128643 CAAAATTCTTCAGCAAAAGGCCA 58.871 39.130 5.01 0.00 46.50 5.36
5614 6889 5.739752 AACAAAATTCTTCAGCAAAAGGC 57.260 34.783 0.00 0.00 45.30 4.35
5750 7028 1.133356 AGCCAACCTTTGCTTCTTCCT 60.133 47.619 0.00 0.00 32.94 3.36
5751 7029 1.332195 AGCCAACCTTTGCTTCTTCC 58.668 50.000 0.00 0.00 32.94 3.46
5752 7030 2.747436 CAAGCCAACCTTTGCTTCTTC 58.253 47.619 0.00 0.00 45.59 2.87
5773 7051 2.288702 CCTGGACTGATAAGCGATCCTG 60.289 54.545 0.00 0.00 33.07 3.86
5797 7076 0.317854 GTGCCGCACAACCTTTCTTC 60.318 55.000 18.79 0.00 34.08 2.87
5811 7090 1.129064 GTACATAACCAAACCGTGCCG 59.871 52.381 0.00 0.00 0.00 5.69
5849 7128 1.887198 AGGACGTGACGAGAAGAACAT 59.113 47.619 13.70 0.00 0.00 2.71
5851 7130 2.483491 AGTAGGACGTGACGAGAAGAAC 59.517 50.000 13.70 1.96 0.00 3.01
5852 7131 2.775890 AGTAGGACGTGACGAGAAGAA 58.224 47.619 13.70 0.00 0.00 2.52
5854 7133 3.622163 ACATAGTAGGACGTGACGAGAAG 59.378 47.826 13.70 0.00 0.00 2.85
5858 7137 4.271776 CACATACATAGTAGGACGTGACGA 59.728 45.833 13.70 0.00 0.00 4.20
5859 7138 4.034858 ACACATACATAGTAGGACGTGACG 59.965 45.833 2.24 2.24 0.00 4.35
5860 7139 5.496133 ACACATACATAGTAGGACGTGAC 57.504 43.478 0.00 0.00 0.00 3.67
5861 7140 6.261603 CCTTACACATACATAGTAGGACGTGA 59.738 42.308 0.00 0.00 0.00 4.35
5862 7141 6.039047 ACCTTACACATACATAGTAGGACGTG 59.961 42.308 0.00 0.00 0.00 4.49
5863 7142 6.125029 ACCTTACACATACATAGTAGGACGT 58.875 40.000 0.00 0.00 0.00 4.34
5906 7188 9.075519 CAACACAGCCATAATAAAACACTTATG 57.924 33.333 0.00 0.00 35.86 1.90
6001 7283 4.749598 CAGCAAAACCATAAAAGACCAACC 59.250 41.667 0.00 0.00 0.00 3.77
6025 7308 0.169672 CAAAGGATCACGCTGGCAAG 59.830 55.000 0.00 0.00 0.00 4.01
6031 7314 1.229428 CACACACAAAGGATCACGCT 58.771 50.000 0.00 0.00 0.00 5.07
6043 7326 1.084935 AACACTAACGCGCACACACA 61.085 50.000 5.73 0.00 0.00 3.72
6044 7327 0.653323 CAACACTAACGCGCACACAC 60.653 55.000 5.73 0.00 0.00 3.82
6053 7338 4.616802 GGATGCACAAAATCAACACTAACG 59.383 41.667 0.00 0.00 0.00 3.18
6064 7349 2.450476 GGAGGTCAGGATGCACAAAAT 58.550 47.619 0.00 0.00 34.76 1.82


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.