Multiple sequence alignment - TraesCS4B01G050200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G050200 chr4B 100.000 8297 0 0 1 8297 38784012 38792308 0.000000e+00 15322.0
1 TraesCS4B01G050200 chr4D 93.564 5842 205 67 1712 7438 26244955 26250740 0.000000e+00 8547.0
2 TraesCS4B01G050200 chr4D 81.371 1342 65 94 314 1580 26243497 26244728 0.000000e+00 922.0
3 TraesCS4B01G050200 chr4D 91.434 572 17 12 7736 8297 26252224 26252773 0.000000e+00 756.0
4 TraesCS4B01G050200 chr4D 93.077 260 11 3 7482 7737 26250757 26251013 2.830000e-99 374.0
5 TraesCS4B01G050200 chr4A 93.029 3443 133 49 1723 5103 577055665 577052268 0.000000e+00 4929.0
6 TraesCS4B01G050200 chr4A 90.993 2698 119 48 5088 7711 577050655 577048008 0.000000e+00 3522.0
7 TraesCS4B01G050200 chr4A 94.056 572 20 8 7736 8297 577047089 577046522 0.000000e+00 856.0
8 TraesCS4B01G050200 chr4A 82.712 885 68 50 789 1638 577056642 577055808 0.000000e+00 708.0
9 TraesCS4B01G050200 chr1A 89.147 129 13 1 7596 7724 569453765 569453638 8.620000e-35 159.0
10 TraesCS4B01G050200 chr5D 85.039 127 18 1 7598 7724 544694724 544694849 2.430000e-25 128.0
11 TraesCS4B01G050200 chr5B 84.252 127 19 1 7598 7724 687167955 687167830 1.130000e-23 122.0
12 TraesCS4B01G050200 chr5B 93.333 75 5 0 7862 7936 687164695 687164621 2.450000e-20 111.0
13 TraesCS4B01G050200 chrUn 97.297 37 1 0 3071 3107 23169627 23169663 6.950000e-06 63.9
14 TraesCS4B01G050200 chrUn 97.297 37 1 0 3071 3107 306819865 306819829 6.950000e-06 63.9
15 TraesCS4B01G050200 chr2D 97.297 37 1 0 3071 3107 620018590 620018554 6.950000e-06 63.9
16 TraesCS4B01G050200 chr2B 97.297 37 1 0 3071 3107 759652760 759652724 6.950000e-06 63.9
17 TraesCS4B01G050200 chr2B 97.297 37 1 0 3071 3107 759655409 759655373 6.950000e-06 63.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G050200 chr4B 38784012 38792308 8296 False 15322.00 15322 100.0000 1 8297 1 chr4B.!!$F1 8296
1 TraesCS4B01G050200 chr4D 26243497 26252773 9276 False 2649.75 8547 89.8615 314 8297 4 chr4D.!!$F1 7983
2 TraesCS4B01G050200 chr4A 577046522 577056642 10120 True 2503.75 4929 90.1975 789 8297 4 chr4A.!!$R1 7508

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
610 624 0.031314 CCGTGGGATCAGACGAGATG 59.969 60.000 15.25 0.0 37.81 2.90 F
611 625 0.031314 CGTGGGATCAGACGAGATGG 59.969 60.000 9.52 0.0 37.81 3.51 F
1118 1214 0.106217 CCCCTCCCTCTGTCTCTCTC 60.106 65.000 0.00 0.0 0.00 3.20 F
2492 2782 0.030092 TTCCCCTCCCCTCGATCAAT 60.030 55.000 0.00 0.0 0.00 2.57 F
2496 2786 0.399454 CCTCCCCTCGATCAATGCAT 59.601 55.000 0.00 0.0 0.00 3.96 F
2781 3112 0.457337 GGCATCAAGCTGGCTTTTCG 60.457 55.000 4.98 0.0 44.79 3.46 F
2855 3186 1.197036 GCGCCTCTTTTCAGGTGTAAC 59.803 52.381 0.00 0.0 44.79 2.50 F
3333 3670 1.259609 TTACTACCCCGTCTGGTGTG 58.740 55.000 0.00 0.0 39.53 3.82 F
4748 5087 0.336048 ATGGTGGGACTGGAATTGGG 59.664 55.000 0.00 0.0 0.00 4.12 F
5354 7321 6.093495 TGCTTTCATGTTGTATTGCTACTACC 59.907 38.462 0.00 0.0 34.08 3.18 F
6467 8453 0.035439 ATGCGGTGGTTCCTTGTAGG 60.035 55.000 0.00 0.0 36.46 3.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1612 1757 0.179215 CAATTGCTGAAGCCGTCGTC 60.179 55.000 0.00 0.0 41.18 4.20 R
1711 1856 0.538584 TACTGCTGCATGGTCAGAGG 59.461 55.000 1.31 0.0 36.19 3.69 R
2970 3306 0.740868 CATCGAAAGCGCCTCCAAGA 60.741 55.000 2.29 0.0 37.46 3.02 R
3967 4304 2.699073 ATGCATTAGCGTGGCTGAG 58.301 52.632 0.00 0.0 46.23 3.35 R
4281 4620 3.053831 AGTAAACCCAGTTGTCCGATG 57.946 47.619 0.00 0.0 0.00 3.84 R
4727 5066 2.024464 CCCAATTCCAGTCCCACCATAA 60.024 50.000 0.00 0.0 0.00 1.90 R
4748 5087 6.246420 ACAAGACATTTGCTGATACTCAAC 57.754 37.500 0.00 0.0 0.00 3.18 R
5232 7199 3.931907 TTGCCTACAGCCACTATCAAT 57.068 42.857 0.00 0.0 42.71 2.57 R
5803 7770 2.100749 TGCCTGTGTGATACTGATACCG 59.899 50.000 0.00 0.0 0.00 4.02 R
7173 9182 0.093026 GACGCGAACAGTACACATGC 59.907 55.000 15.93 0.0 0.00 4.06 R
7656 9708 0.826715 ATTCCAAGCTCGCTCTAGCA 59.173 50.000 2.44 0.0 45.30 3.49 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 4.513318 GGACATAGACTAAGCTGGAATTGC 59.487 45.833 0.00 0.00 0.00 3.56
24 25 5.363939 GACATAGACTAAGCTGGAATTGCT 58.636 41.667 0.00 0.00 43.32 3.91
25 26 5.363939 ACATAGACTAAGCTGGAATTGCTC 58.636 41.667 0.00 0.00 40.22 4.26
26 27 2.898705 AGACTAAGCTGGAATTGCTCG 58.101 47.619 0.00 0.00 40.22 5.03
27 28 1.328986 GACTAAGCTGGAATTGCTCGC 59.671 52.381 0.00 1.15 40.22 5.03
28 29 1.065854 ACTAAGCTGGAATTGCTCGCT 60.066 47.619 8.14 8.14 40.22 4.93
29 30 2.168521 ACTAAGCTGGAATTGCTCGCTA 59.831 45.455 12.90 4.01 40.22 4.26
30 31 1.661341 AAGCTGGAATTGCTCGCTAG 58.339 50.000 12.90 0.00 40.22 3.42
31 32 0.826715 AGCTGGAATTGCTCGCTAGA 59.173 50.000 11.36 0.00 35.67 2.43
32 33 0.933796 GCTGGAATTGCTCGCTAGAC 59.066 55.000 0.00 0.00 0.00 2.59
33 34 1.740380 GCTGGAATTGCTCGCTAGACA 60.740 52.381 0.00 0.00 0.00 3.41
34 35 2.200067 CTGGAATTGCTCGCTAGACAG 58.800 52.381 0.00 0.00 0.00 3.51
35 36 0.933796 GGAATTGCTCGCTAGACAGC 59.066 55.000 6.44 6.44 44.90 4.40
36 37 0.933796 GAATTGCTCGCTAGACAGCC 59.066 55.000 10.07 0.00 45.64 4.85
37 38 0.462759 AATTGCTCGCTAGACAGCCC 60.463 55.000 10.07 0.00 45.64 5.19
38 39 1.333636 ATTGCTCGCTAGACAGCCCT 61.334 55.000 10.07 0.00 45.64 5.19
39 40 2.105930 GCTCGCTAGACAGCCCTG 59.894 66.667 0.00 0.00 45.64 4.45
40 41 2.105930 CTCGCTAGACAGCCCTGC 59.894 66.667 0.00 0.00 45.64 4.85
41 42 3.438017 CTCGCTAGACAGCCCTGCC 62.438 68.421 0.00 0.00 45.64 4.85
42 43 4.880537 CGCTAGACAGCCCTGCCG 62.881 72.222 0.00 0.00 45.64 5.69
43 44 4.537433 GCTAGACAGCCCTGCCGG 62.537 72.222 0.00 0.00 42.37 6.13
65 66 4.052229 CTCCGGTCGTTGCGGTCT 62.052 66.667 0.00 0.00 0.00 3.85
66 67 4.351938 TCCGGTCGTTGCGGTCTG 62.352 66.667 0.00 0.00 0.00 3.51
69 70 4.980805 GGTCGTTGCGGTCTGCCA 62.981 66.667 0.00 0.00 45.60 4.92
70 71 3.414700 GTCGTTGCGGTCTGCCAG 61.415 66.667 0.00 0.00 45.60 4.85
71 72 4.680237 TCGTTGCGGTCTGCCAGG 62.680 66.667 0.00 0.00 45.60 4.45
72 73 4.680237 CGTTGCGGTCTGCCAGGA 62.680 66.667 0.00 0.00 45.60 3.86
73 74 2.743928 GTTGCGGTCTGCCAGGAG 60.744 66.667 0.00 0.00 45.60 3.69
74 75 2.922503 TTGCGGTCTGCCAGGAGA 60.923 61.111 0.00 0.00 45.60 3.71
75 76 3.240134 TTGCGGTCTGCCAGGAGAC 62.240 63.158 10.55 10.55 45.60 3.36
79 80 4.459089 GTCTGCCAGGAGACCGCC 62.459 72.222 8.01 0.00 37.05 6.13
94 95 3.327404 GCCGGGGTGGAGAAGGAA 61.327 66.667 2.18 0.00 42.00 3.36
95 96 2.990479 CCGGGGTGGAGAAGGAAG 59.010 66.667 0.00 0.00 42.00 3.46
96 97 2.670148 CCGGGGTGGAGAAGGAAGG 61.670 68.421 0.00 0.00 42.00 3.46
97 98 2.677848 GGGGTGGAGAAGGAAGGC 59.322 66.667 0.00 0.00 0.00 4.35
98 99 1.925972 GGGGTGGAGAAGGAAGGCT 60.926 63.158 0.00 0.00 0.00 4.58
99 100 1.604915 GGGTGGAGAAGGAAGGCTC 59.395 63.158 0.00 0.00 0.00 4.70
100 101 1.201429 GGGTGGAGAAGGAAGGCTCA 61.201 60.000 0.00 0.00 32.83 4.26
101 102 0.035915 GGTGGAGAAGGAAGGCTCAC 60.036 60.000 0.00 0.00 32.83 3.51
102 103 0.687354 GTGGAGAAGGAAGGCTCACA 59.313 55.000 0.00 0.00 32.83 3.58
103 104 1.280421 GTGGAGAAGGAAGGCTCACAT 59.720 52.381 0.00 0.00 32.83 3.21
104 105 1.280133 TGGAGAAGGAAGGCTCACATG 59.720 52.381 0.00 0.00 32.83 3.21
105 106 1.407989 GGAGAAGGAAGGCTCACATGG 60.408 57.143 0.00 0.00 32.83 3.66
106 107 0.622665 AGAAGGAAGGCTCACATGGG 59.377 55.000 0.00 0.00 0.00 4.00
107 108 0.394899 GAAGGAAGGCTCACATGGGG 60.395 60.000 0.00 0.00 0.00 4.96
108 109 1.142688 AAGGAAGGCTCACATGGGGT 61.143 55.000 0.00 0.00 0.00 4.95
109 110 0.253160 AGGAAGGCTCACATGGGGTA 60.253 55.000 0.00 0.00 0.00 3.69
110 111 0.846693 GGAAGGCTCACATGGGGTAT 59.153 55.000 0.00 0.00 0.00 2.73
111 112 1.202818 GGAAGGCTCACATGGGGTATC 60.203 57.143 0.00 0.00 0.00 2.24
112 113 0.469917 AAGGCTCACATGGGGTATCG 59.530 55.000 0.00 0.00 0.00 2.92
113 114 1.598130 GGCTCACATGGGGTATCGC 60.598 63.158 0.00 0.00 0.00 4.58
114 115 1.598130 GCTCACATGGGGTATCGCC 60.598 63.158 0.00 0.00 36.97 5.54
115 116 1.300931 CTCACATGGGGTATCGCCG 60.301 63.158 0.00 0.00 39.47 6.46
116 117 1.744320 CTCACATGGGGTATCGCCGA 61.744 60.000 0.00 0.00 39.47 5.54
117 118 1.118965 TCACATGGGGTATCGCCGAT 61.119 55.000 4.45 4.45 39.47 4.18
118 119 0.606096 CACATGGGGTATCGCCGATA 59.394 55.000 1.98 1.98 39.47 2.92
119 120 1.207089 CACATGGGGTATCGCCGATAT 59.793 52.381 10.39 0.00 39.47 1.63
120 121 1.207089 ACATGGGGTATCGCCGATATG 59.793 52.381 10.39 7.60 39.47 1.78
121 122 0.830648 ATGGGGTATCGCCGATATGG 59.169 55.000 10.39 0.00 39.47 2.74
122 123 0.251877 TGGGGTATCGCCGATATGGA 60.252 55.000 10.39 0.00 42.00 3.41
123 124 1.120530 GGGGTATCGCCGATATGGAT 58.879 55.000 10.39 0.00 42.00 3.41
124 125 1.202533 GGGGTATCGCCGATATGGATG 60.203 57.143 10.39 0.00 42.00 3.51
125 126 1.202533 GGGTATCGCCGATATGGATGG 60.203 57.143 10.39 0.00 42.00 3.51
126 127 1.754803 GGTATCGCCGATATGGATGGA 59.245 52.381 10.39 0.00 42.00 3.41
127 128 2.365617 GGTATCGCCGATATGGATGGAT 59.634 50.000 10.39 0.00 42.00 3.41
128 129 2.898729 ATCGCCGATATGGATGGATC 57.101 50.000 0.00 0.00 42.00 3.36
129 130 1.852633 TCGCCGATATGGATGGATCT 58.147 50.000 0.00 0.00 42.00 2.75
130 131 2.179427 TCGCCGATATGGATGGATCTT 58.821 47.619 0.00 0.00 42.00 2.40
131 132 2.094026 TCGCCGATATGGATGGATCTTG 60.094 50.000 0.00 0.00 42.00 3.02
132 133 2.354103 CGCCGATATGGATGGATCTTGT 60.354 50.000 0.00 0.00 42.00 3.16
133 134 3.119137 CGCCGATATGGATGGATCTTGTA 60.119 47.826 0.00 0.00 42.00 2.41
134 135 4.184629 GCCGATATGGATGGATCTTGTAC 58.815 47.826 0.00 0.00 42.00 2.90
135 136 4.081420 GCCGATATGGATGGATCTTGTACT 60.081 45.833 0.00 0.00 42.00 2.73
136 137 5.127194 GCCGATATGGATGGATCTTGTACTA 59.873 44.000 0.00 0.00 42.00 1.82
137 138 6.565234 CCGATATGGATGGATCTTGTACTAC 58.435 44.000 0.00 0.00 42.00 2.73
138 139 6.378564 CCGATATGGATGGATCTTGTACTACT 59.621 42.308 0.00 0.00 42.00 2.57
139 140 7.556635 CCGATATGGATGGATCTTGTACTACTA 59.443 40.741 0.00 0.00 42.00 1.82
140 141 8.616942 CGATATGGATGGATCTTGTACTACTAG 58.383 40.741 0.00 0.00 0.00 2.57
141 142 9.469097 GATATGGATGGATCTTGTACTACTAGT 57.531 37.037 0.00 0.00 0.00 2.57
142 143 9.830186 ATATGGATGGATCTTGTACTACTAGTT 57.170 33.333 0.00 0.00 0.00 2.24
143 144 7.973048 TGGATGGATCTTGTACTACTAGTTT 57.027 36.000 0.00 0.00 0.00 2.66
144 145 9.656323 ATGGATGGATCTTGTACTACTAGTTTA 57.344 33.333 0.00 0.00 0.00 2.01
145 146 9.483489 TGGATGGATCTTGTACTACTAGTTTAA 57.517 33.333 0.00 0.00 0.00 1.52
146 147 9.968870 GGATGGATCTTGTACTACTAGTTTAAG 57.031 37.037 0.00 0.00 0.00 1.85
169 170 8.648698 AAGATCAGATATAGTATGTGCTCTGT 57.351 34.615 0.00 0.00 33.53 3.41
170 171 9.746457 AAGATCAGATATAGTATGTGCTCTGTA 57.254 33.333 0.00 0.00 33.53 2.74
171 172 9.746457 AGATCAGATATAGTATGTGCTCTGTAA 57.254 33.333 0.00 0.00 33.53 2.41
173 174 8.926092 TCAGATATAGTATGTGCTCTGTAAGT 57.074 34.615 0.00 0.00 33.53 2.24
174 175 9.355916 TCAGATATAGTATGTGCTCTGTAAGTT 57.644 33.333 0.00 0.00 33.53 2.66
175 176 9.404348 CAGATATAGTATGTGCTCTGTAAGTTG 57.596 37.037 0.00 0.00 33.76 3.16
176 177 8.580720 AGATATAGTATGTGCTCTGTAAGTTGG 58.419 37.037 0.00 0.00 33.76 3.77
177 178 3.600388 AGTATGTGCTCTGTAAGTTGGC 58.400 45.455 0.00 0.00 33.76 4.52
178 179 2.566833 ATGTGCTCTGTAAGTTGGCA 57.433 45.000 0.00 0.00 34.26 4.92
179 180 1.593196 TGTGCTCTGTAAGTTGGCAC 58.407 50.000 9.07 9.07 46.68 5.01
180 181 0.512952 GTGCTCTGTAAGTTGGCACG 59.487 55.000 0.00 0.00 42.06 5.34
181 182 0.391228 TGCTCTGTAAGTTGGCACGA 59.609 50.000 0.00 0.00 32.58 4.35
182 183 0.790814 GCTCTGTAAGTTGGCACGAC 59.209 55.000 0.00 0.00 33.76 4.34
183 184 1.872237 GCTCTGTAAGTTGGCACGACA 60.872 52.381 0.00 0.00 33.76 4.35
184 185 1.792949 CTCTGTAAGTTGGCACGACAC 59.207 52.381 0.00 0.00 33.76 3.67
185 186 0.506932 CTGTAAGTTGGCACGACACG 59.493 55.000 0.00 0.00 0.00 4.49
186 187 0.102663 TGTAAGTTGGCACGACACGA 59.897 50.000 0.00 0.00 0.00 4.35
187 188 0.505655 GTAAGTTGGCACGACACGAC 59.494 55.000 0.00 0.00 0.00 4.34
188 189 0.102663 TAAGTTGGCACGACACGACA 59.897 50.000 0.00 0.00 0.00 4.35
189 190 1.426041 AAGTTGGCACGACACGACAC 61.426 55.000 0.00 0.00 0.00 3.67
190 191 2.957489 TTGGCACGACACGACACG 60.957 61.111 0.00 0.00 0.00 4.49
191 192 3.412879 TTGGCACGACACGACACGA 62.413 57.895 0.00 0.00 0.00 4.35
192 193 3.392440 GGCACGACACGACACGAC 61.392 66.667 0.00 0.00 0.00 4.34
193 194 2.652813 GCACGACACGACACGACA 60.653 61.111 0.00 0.00 0.00 4.35
194 195 2.913265 GCACGACACGACACGACAC 61.913 63.158 0.00 0.00 0.00 3.67
195 196 2.351548 ACGACACGACACGACACG 60.352 61.111 0.00 0.00 0.00 4.49
196 197 2.052854 CGACACGACACGACACGA 60.053 61.111 0.00 0.00 0.00 4.35
197 198 2.344969 CGACACGACACGACACGAC 61.345 63.158 0.00 0.00 0.00 4.34
198 199 1.297819 GACACGACACGACACGACA 60.298 57.895 0.00 0.00 0.00 4.35
199 200 1.526617 GACACGACACGACACGACAC 61.527 60.000 0.00 0.00 0.00 3.67
200 201 2.351548 ACGACACGACACGACACG 60.352 61.111 0.00 0.00 0.00 4.49
201 202 3.739056 CGACACGACACGACACGC 61.739 66.667 0.00 0.00 0.00 5.34
202 203 2.652813 GACACGACACGACACGCA 60.653 61.111 0.00 0.00 0.00 5.24
203 204 2.913265 GACACGACACGACACGCAC 61.913 63.158 0.00 0.00 0.00 5.34
204 205 3.688330 CACGACACGACACGCACC 61.688 66.667 0.00 0.00 0.00 5.01
205 206 4.196108 ACGACACGACACGCACCA 62.196 61.111 0.00 0.00 0.00 4.17
206 207 3.394874 CGACACGACACGCACCAG 61.395 66.667 0.00 0.00 0.00 4.00
207 208 3.702555 GACACGACACGCACCAGC 61.703 66.667 0.00 0.00 37.42 4.85
208 209 4.221422 ACACGACACGCACCAGCT 62.221 61.111 0.00 0.00 39.10 4.24
209 210 2.967076 CACGACACGCACCAGCTT 60.967 61.111 0.00 0.00 39.10 3.74
210 211 2.967076 ACGACACGCACCAGCTTG 60.967 61.111 0.00 0.00 44.80 4.01
211 212 3.716006 CGACACGCACCAGCTTGG 61.716 66.667 0.00 1.16 43.67 3.61
212 213 2.280797 GACACGCACCAGCTTGGA 60.281 61.111 8.91 0.00 43.67 3.53
213 214 2.281070 ACACGCACCAGCTTGGAG 60.281 61.111 8.91 2.83 43.67 3.86
214 215 2.031012 CACGCACCAGCTTGGAGA 59.969 61.111 8.91 0.00 40.96 3.71
215 216 2.031163 ACGCACCAGCTTGGAGAC 59.969 61.111 8.91 0.00 40.96 3.36
216 217 3.114616 CGCACCAGCTTGGAGACG 61.115 66.667 8.91 5.81 40.96 4.18
217 218 2.343758 GCACCAGCTTGGAGACGA 59.656 61.111 8.91 0.00 40.96 4.20
218 219 1.078848 GCACCAGCTTGGAGACGAT 60.079 57.895 8.91 0.00 40.96 3.73
219 220 1.364626 GCACCAGCTTGGAGACGATG 61.365 60.000 8.91 0.00 40.96 3.84
220 221 0.742281 CACCAGCTTGGAGACGATGG 60.742 60.000 8.91 0.00 40.96 3.51
221 222 1.194781 ACCAGCTTGGAGACGATGGT 61.195 55.000 8.91 0.00 40.96 3.55
222 223 0.036010 CCAGCTTGGAGACGATGGTT 60.036 55.000 0.00 0.00 40.96 3.67
223 224 1.081892 CAGCTTGGAGACGATGGTTG 58.918 55.000 0.00 0.00 0.00 3.77
224 225 0.976641 AGCTTGGAGACGATGGTTGA 59.023 50.000 0.00 0.00 0.00 3.18
225 226 1.066573 AGCTTGGAGACGATGGTTGAG 60.067 52.381 0.00 0.00 0.00 3.02
226 227 1.363744 CTTGGAGACGATGGTTGAGC 58.636 55.000 0.00 0.00 0.00 4.26
227 228 0.976641 TTGGAGACGATGGTTGAGCT 59.023 50.000 0.00 0.00 0.00 4.09
228 229 0.532573 TGGAGACGATGGTTGAGCTC 59.467 55.000 6.82 6.82 0.00 4.09
229 230 0.179097 GGAGACGATGGTTGAGCTCC 60.179 60.000 12.15 0.00 35.63 4.70
230 231 0.526524 GAGACGATGGTTGAGCTCCG 60.527 60.000 12.15 8.78 0.00 4.63
231 232 0.965866 AGACGATGGTTGAGCTCCGA 60.966 55.000 12.15 0.00 0.00 4.55
232 233 0.103208 GACGATGGTTGAGCTCCGAT 59.897 55.000 12.15 0.00 0.00 4.18
233 234 0.537188 ACGATGGTTGAGCTCCGATT 59.463 50.000 12.15 0.00 0.00 3.34
234 235 1.754803 ACGATGGTTGAGCTCCGATTA 59.245 47.619 12.15 0.00 0.00 1.75
235 236 2.365617 ACGATGGTTGAGCTCCGATTAT 59.634 45.455 12.15 0.00 0.00 1.28
236 237 2.733552 CGATGGTTGAGCTCCGATTATG 59.266 50.000 12.15 0.00 0.00 1.90
237 238 3.733337 GATGGTTGAGCTCCGATTATGT 58.267 45.455 12.15 0.00 0.00 2.29
238 239 2.905075 TGGTTGAGCTCCGATTATGTG 58.095 47.619 12.15 0.00 0.00 3.21
239 240 2.236146 TGGTTGAGCTCCGATTATGTGT 59.764 45.455 12.15 0.00 0.00 3.72
240 241 2.866762 GGTTGAGCTCCGATTATGTGTC 59.133 50.000 12.15 0.00 0.00 3.67
241 242 2.492019 TGAGCTCCGATTATGTGTCG 57.508 50.000 12.15 0.00 38.75 4.35
242 243 1.132588 GAGCTCCGATTATGTGTCGC 58.867 55.000 0.87 0.00 37.75 5.19
243 244 0.595053 AGCTCCGATTATGTGTCGCG 60.595 55.000 0.00 0.00 37.75 5.87
244 245 0.870307 GCTCCGATTATGTGTCGCGT 60.870 55.000 5.77 0.00 37.75 6.01
245 246 1.598676 GCTCCGATTATGTGTCGCGTA 60.599 52.381 5.77 0.00 37.75 4.42
246 247 2.041966 CTCCGATTATGTGTCGCGTAC 58.958 52.381 5.77 7.70 37.75 3.67
247 248 0.768266 CCGATTATGTGTCGCGTACG 59.232 55.000 11.84 11.84 37.75 3.67
248 249 1.459756 CGATTATGTGTCGCGTACGT 58.540 50.000 17.90 10.91 41.18 3.57
249 250 2.599612 CCGATTATGTGTCGCGTACGTA 60.600 50.000 17.90 9.87 41.18 3.57
250 251 3.220773 CGATTATGTGTCGCGTACGTAT 58.779 45.455 17.90 5.07 41.18 3.06
251 252 4.385379 CGATTATGTGTCGCGTACGTATA 58.615 43.478 17.90 1.00 41.18 1.47
252 253 5.017612 CGATTATGTGTCGCGTACGTATAT 58.982 41.667 17.90 7.60 41.18 0.86
253 254 5.166757 CGATTATGTGTCGCGTACGTATATC 59.833 44.000 17.90 14.55 41.18 1.63
254 255 2.668617 TGTGTCGCGTACGTATATCC 57.331 50.000 17.90 0.00 41.18 2.59
255 256 1.939255 TGTGTCGCGTACGTATATCCA 59.061 47.619 17.90 4.49 41.18 3.41
256 257 2.549329 TGTGTCGCGTACGTATATCCAT 59.451 45.455 17.90 0.00 41.18 3.41
257 258 3.003585 TGTGTCGCGTACGTATATCCATT 59.996 43.478 17.90 0.00 41.18 3.16
258 259 4.213059 TGTGTCGCGTACGTATATCCATTA 59.787 41.667 17.90 0.00 41.18 1.90
259 260 5.146460 GTGTCGCGTACGTATATCCATTAA 58.854 41.667 17.90 0.00 41.18 1.40
260 261 5.058492 GTGTCGCGTACGTATATCCATTAAC 59.942 44.000 17.90 0.00 41.18 2.01
261 262 4.554973 GTCGCGTACGTATATCCATTAACC 59.445 45.833 17.90 0.00 41.18 2.85
262 263 4.215185 TCGCGTACGTATATCCATTAACCA 59.785 41.667 17.90 0.00 41.18 3.67
263 264 4.556135 CGCGTACGTATATCCATTAACCAG 59.444 45.833 17.90 0.00 33.53 4.00
264 265 4.325472 GCGTACGTATATCCATTAACCAGC 59.675 45.833 17.90 0.00 0.00 4.85
265 266 5.706916 CGTACGTATATCCATTAACCAGCT 58.293 41.667 7.22 0.00 0.00 4.24
266 267 6.623549 GCGTACGTATATCCATTAACCAGCTA 60.624 42.308 17.90 0.00 0.00 3.32
267 268 6.965500 CGTACGTATATCCATTAACCAGCTAG 59.035 42.308 7.22 0.00 0.00 3.42
268 269 6.912951 ACGTATATCCATTAACCAGCTAGT 57.087 37.500 0.00 0.00 0.00 2.57
269 270 8.950210 GTACGTATATCCATTAACCAGCTAGTA 58.050 37.037 0.00 0.00 0.00 1.82
270 271 8.591114 ACGTATATCCATTAACCAGCTAGTAT 57.409 34.615 0.00 0.00 0.00 2.12
271 272 8.684520 ACGTATATCCATTAACCAGCTAGTATC 58.315 37.037 0.00 0.00 0.00 2.24
272 273 8.904834 CGTATATCCATTAACCAGCTAGTATCT 58.095 37.037 0.00 0.00 0.00 1.98
274 275 6.613153 ATCCATTAACCAGCTAGTATCTCC 57.387 41.667 0.00 0.00 0.00 3.71
275 276 5.716979 TCCATTAACCAGCTAGTATCTCCT 58.283 41.667 0.00 0.00 0.00 3.69
276 277 5.540337 TCCATTAACCAGCTAGTATCTCCTG 59.460 44.000 0.00 0.00 0.00 3.86
278 279 1.710816 ACCAGCTAGTATCTCCTGGC 58.289 55.000 10.69 0.00 46.84 4.85
282 283 3.541242 AGCTAGTATCTCCTGGCTGAT 57.459 47.619 0.00 7.10 46.13 2.90
283 284 3.430453 AGCTAGTATCTCCTGGCTGATC 58.570 50.000 0.00 0.00 46.13 2.92
284 285 2.495669 GCTAGTATCTCCTGGCTGATCC 59.504 54.545 5.52 0.00 36.16 3.36
285 286 2.022718 AGTATCTCCTGGCTGATCCC 57.977 55.000 5.52 0.00 0.00 3.85
286 287 0.605589 GTATCTCCTGGCTGATCCCG 59.394 60.000 5.52 0.00 0.00 5.14
287 288 0.188587 TATCTCCTGGCTGATCCCGT 59.811 55.000 5.52 0.00 0.00 5.28
288 289 1.406065 ATCTCCTGGCTGATCCCGTG 61.406 60.000 0.00 0.00 0.00 4.94
289 290 3.746949 CTCCTGGCTGATCCCGTGC 62.747 68.421 0.00 0.00 0.00 5.34
290 291 4.100084 CCTGGCTGATCCCGTGCA 62.100 66.667 0.00 0.00 0.00 4.57
291 292 2.513204 CTGGCTGATCCCGTGCAG 60.513 66.667 0.00 0.00 35.28 4.41
292 293 3.320879 CTGGCTGATCCCGTGCAGT 62.321 63.158 0.00 0.00 34.66 4.40
293 294 1.960040 CTGGCTGATCCCGTGCAGTA 61.960 60.000 0.00 0.00 34.66 2.74
294 295 1.227380 GGCTGATCCCGTGCAGTAG 60.227 63.158 0.00 0.00 34.66 2.57
295 296 1.517832 GCTGATCCCGTGCAGTAGT 59.482 57.895 0.00 0.00 34.66 2.73
296 297 0.807667 GCTGATCCCGTGCAGTAGTG 60.808 60.000 0.00 0.00 34.66 2.74
313 314 7.763172 CAGTAGTGCTCCTGTCTAAAATAAG 57.237 40.000 0.00 0.00 0.00 1.73
314 315 7.548097 CAGTAGTGCTCCTGTCTAAAATAAGA 58.452 38.462 0.00 0.00 0.00 2.10
315 316 8.200792 CAGTAGTGCTCCTGTCTAAAATAAGAT 58.799 37.037 0.00 0.00 0.00 2.40
316 317 8.200792 AGTAGTGCTCCTGTCTAAAATAAGATG 58.799 37.037 0.00 0.00 0.00 2.90
317 318 6.352516 AGTGCTCCTGTCTAAAATAAGATGG 58.647 40.000 0.00 0.00 0.00 3.51
318 319 5.008118 GTGCTCCTGTCTAAAATAAGATGGC 59.992 44.000 0.00 0.00 0.00 4.40
319 320 4.212214 GCTCCTGTCTAAAATAAGATGGCG 59.788 45.833 0.00 0.00 0.00 5.69
320 321 5.601662 CTCCTGTCTAAAATAAGATGGCGA 58.398 41.667 0.00 0.00 0.00 5.54
321 322 5.601662 TCCTGTCTAAAATAAGATGGCGAG 58.398 41.667 0.00 0.00 0.00 5.03
322 323 4.212214 CCTGTCTAAAATAAGATGGCGAGC 59.788 45.833 0.00 0.00 0.00 5.03
323 324 4.765273 TGTCTAAAATAAGATGGCGAGCA 58.235 39.130 0.00 0.00 0.00 4.26
324 325 5.182487 TGTCTAAAATAAGATGGCGAGCAA 58.818 37.500 0.00 0.00 0.00 3.91
325 326 5.645929 TGTCTAAAATAAGATGGCGAGCAAA 59.354 36.000 0.00 0.00 0.00 3.68
326 327 6.183360 TGTCTAAAATAAGATGGCGAGCAAAG 60.183 38.462 0.00 0.00 0.00 2.77
327 328 5.880332 TCTAAAATAAGATGGCGAGCAAAGT 59.120 36.000 0.00 0.00 0.00 2.66
340 341 3.659444 CGAGCAAAGTGAAAGTAAAAGCG 59.341 43.478 0.00 0.00 0.00 4.68
344 345 4.617223 GCAAAGTGAAAGTAAAAGCGGATC 59.383 41.667 0.00 0.00 0.00 3.36
348 349 5.305585 AGTGAAAGTAAAAGCGGATCAGAA 58.694 37.500 0.00 0.00 0.00 3.02
362 363 3.253677 GGATCAGAACGAGATATGTCCGT 59.746 47.826 0.00 1.27 34.30 4.69
363 364 3.965292 TCAGAACGAGATATGTCCGTC 57.035 47.619 6.48 0.00 32.58 4.79
364 365 2.617308 TCAGAACGAGATATGTCCGTCC 59.383 50.000 6.48 0.00 32.58 4.79
365 366 1.602851 AGAACGAGATATGTCCGTCCG 59.397 52.381 6.48 0.00 32.58 4.79
366 367 1.600957 GAACGAGATATGTCCGTCCGA 59.399 52.381 6.48 0.00 32.58 4.55
367 368 1.227639 ACGAGATATGTCCGTCCGAG 58.772 55.000 0.00 0.00 29.30 4.63
373 374 2.598098 TATGTCCGTCCGAGGCGAGA 62.598 60.000 7.36 2.00 0.00 4.04
374 375 3.878519 GTCCGTCCGAGGCGAGAG 61.879 72.222 7.36 0.00 0.00 3.20
386 387 3.283684 CGAGAGCGAGCGAGGGAT 61.284 66.667 0.00 0.00 40.82 3.85
409 410 1.990799 TCGCTGTTGACTATTGACCG 58.009 50.000 0.00 0.00 0.00 4.79
416 417 0.535335 TGACTATTGACCGCCACCTC 59.465 55.000 0.00 0.00 0.00 3.85
425 426 4.787280 CGCCACCTCCTCCCCTCT 62.787 72.222 0.00 0.00 0.00 3.69
426 427 2.766229 GCCACCTCCTCCCCTCTC 60.766 72.222 0.00 0.00 0.00 3.20
427 428 2.041405 CCACCTCCTCCCCTCTCC 60.041 72.222 0.00 0.00 0.00 3.71
602 616 4.838152 CACCGCCCGTGGGATCAG 62.838 72.222 9.72 0.00 38.96 2.90
604 618 4.530857 CCGCCCGTGGGATCAGAC 62.531 72.222 9.72 0.00 37.50 3.51
605 619 4.873129 CGCCCGTGGGATCAGACG 62.873 72.222 9.72 8.40 37.50 4.18
606 620 3.458163 GCCCGTGGGATCAGACGA 61.458 66.667 9.72 0.00 37.81 4.20
607 621 2.808315 CCCGTGGGATCAGACGAG 59.192 66.667 15.25 0.77 37.81 4.18
608 622 1.753078 CCCGTGGGATCAGACGAGA 60.753 63.158 15.25 0.00 37.81 4.04
609 623 1.109920 CCCGTGGGATCAGACGAGAT 61.110 60.000 15.25 0.00 37.81 2.75
610 624 0.031314 CCGTGGGATCAGACGAGATG 59.969 60.000 15.25 0.00 37.81 2.90
611 625 0.031314 CGTGGGATCAGACGAGATGG 59.969 60.000 9.52 0.00 37.81 3.51
612 626 0.390860 GTGGGATCAGACGAGATGGG 59.609 60.000 0.00 0.00 0.00 4.00
613 627 0.261696 TGGGATCAGACGAGATGGGA 59.738 55.000 0.00 0.00 0.00 4.37
677 691 0.989890 GACGAACCGAATCAGAACCG 59.010 55.000 0.00 0.00 0.00 4.44
738 783 2.125106 GGTGTGGCCGATGGACTC 60.125 66.667 0.00 0.00 0.00 3.36
748 793 1.224075 CGATGGACTCATGCATGGAC 58.776 55.000 25.97 15.88 36.94 4.02
755 800 0.887836 CTCATGCATGGACCGATGGG 60.888 60.000 25.97 0.00 40.11 4.00
810 855 1.530283 GGGTGGGGTTCGGATAAGG 59.470 63.158 0.00 0.00 0.00 2.69
811 856 1.530283 GGTGGGGTTCGGATAAGGG 59.470 63.158 0.00 0.00 0.00 3.95
812 857 0.984432 GGTGGGGTTCGGATAAGGGA 60.984 60.000 0.00 0.00 0.00 4.20
813 858 0.468648 GTGGGGTTCGGATAAGGGAG 59.531 60.000 0.00 0.00 0.00 4.30
814 859 0.693092 TGGGGTTCGGATAAGGGAGG 60.693 60.000 0.00 0.00 0.00 4.30
815 860 1.416480 GGGGTTCGGATAAGGGAGGG 61.416 65.000 0.00 0.00 0.00 4.30
816 861 0.399519 GGGTTCGGATAAGGGAGGGA 60.400 60.000 0.00 0.00 0.00 4.20
931 994 0.538746 GAAAAGGAGGCCCGGTTTGA 60.539 55.000 0.00 0.00 37.58 2.69
942 1005 6.265876 GGAGGCCCGGTTTGATTATTTATTTA 59.734 38.462 0.00 0.00 0.00 1.40
946 1009 9.332502 GGCCCGGTTTGATTATTTATTTATTTT 57.667 29.630 0.00 0.00 0.00 1.82
960 1037 2.575694 TATTTTTAGTCGGGCGCGTA 57.424 45.000 23.19 6.22 0.00 4.42
1043 1139 2.029073 AACAGGCAGACGACCACG 59.971 61.111 0.00 0.00 45.75 4.94
1095 1191 2.041115 GGAAAAGCGACCCTGCTCC 61.041 63.158 0.00 0.00 46.60 4.70
1097 1193 2.470938 GAAAAGCGACCCTGCTCCCT 62.471 60.000 0.00 0.00 46.60 4.20
1109 1205 3.039526 CTCCCTCCCCCTCCCTCT 61.040 72.222 0.00 0.00 0.00 3.69
1110 1206 3.368501 TCCCTCCCCCTCCCTCTG 61.369 72.222 0.00 0.00 0.00 3.35
1111 1207 3.700350 CCCTCCCCCTCCCTCTGT 61.700 72.222 0.00 0.00 0.00 3.41
1112 1208 2.041405 CCTCCCCCTCCCTCTGTC 60.041 72.222 0.00 0.00 0.00 3.51
1113 1209 2.641746 CCTCCCCCTCCCTCTGTCT 61.642 68.421 0.00 0.00 0.00 3.41
1114 1210 1.075600 CTCCCCCTCCCTCTGTCTC 60.076 68.421 0.00 0.00 0.00 3.36
1115 1211 1.547755 TCCCCCTCCCTCTGTCTCT 60.548 63.158 0.00 0.00 0.00 3.10
1117 1213 1.589399 CCCCCTCCCTCTGTCTCTCT 61.589 65.000 0.00 0.00 0.00 3.10
1118 1214 0.106217 CCCCTCCCTCTGTCTCTCTC 60.106 65.000 0.00 0.00 0.00 3.20
1119 1215 0.926293 CCCTCCCTCTGTCTCTCTCT 59.074 60.000 0.00 0.00 0.00 3.10
1120 1216 1.133792 CCCTCCCTCTGTCTCTCTCTC 60.134 61.905 0.00 0.00 0.00 3.20
1143 1262 0.327259 TCATCCTCTTGCTGCTGCTT 59.673 50.000 17.00 0.00 40.48 3.91
1144 1263 0.452184 CATCCTCTTGCTGCTGCTTG 59.548 55.000 17.00 9.24 40.48 4.01
1145 1264 0.327259 ATCCTCTTGCTGCTGCTTGA 59.673 50.000 17.00 12.74 40.48 3.02
1146 1265 0.321387 TCCTCTTGCTGCTGCTTGAG 60.321 55.000 21.71 21.71 40.48 3.02
1154 1273 2.350514 GCTGCTTGAGCTGAGGGT 59.649 61.111 13.18 0.00 45.21 4.34
1155 1274 1.303155 GCTGCTTGAGCTGAGGGTT 60.303 57.895 13.18 0.00 45.21 4.11
1156 1275 1.584380 GCTGCTTGAGCTGAGGGTTG 61.584 60.000 13.18 0.00 45.21 3.77
1157 1276 0.959372 CTGCTTGAGCTGAGGGTTGG 60.959 60.000 4.44 0.00 41.71 3.77
1158 1277 1.376466 GCTTGAGCTGAGGGTTGGA 59.624 57.895 0.00 0.00 38.21 3.53
1159 1278 0.676151 GCTTGAGCTGAGGGTTGGAG 60.676 60.000 0.00 0.00 38.21 3.86
1160 1279 0.689623 CTTGAGCTGAGGGTTGGAGT 59.310 55.000 0.00 0.00 0.00 3.85
1161 1280 0.397941 TTGAGCTGAGGGTTGGAGTG 59.602 55.000 0.00 0.00 0.00 3.51
1162 1281 1.376553 GAGCTGAGGGTTGGAGTGC 60.377 63.158 0.00 0.00 0.00 4.40
1163 1282 2.743928 GCTGAGGGTTGGAGTGCG 60.744 66.667 0.00 0.00 0.00 5.34
1180 1299 3.873883 GGCGCATGTGAGCTGAGC 61.874 66.667 10.83 0.00 40.76 4.26
1181 1300 2.818714 GCGCATGTGAGCTGAGCT 60.819 61.111 6.69 6.69 43.88 4.09
1184 1303 1.376942 GCATGTGAGCTGAGCTGGT 60.377 57.895 13.71 0.00 39.88 4.00
1185 1304 0.959372 GCATGTGAGCTGAGCTGGTT 60.959 55.000 13.71 0.00 39.88 3.67
1188 1307 1.673665 GTGAGCTGAGCTGGTTGGG 60.674 63.158 13.71 0.00 39.88 4.12
1189 1308 2.749441 GAGCTGAGCTGGTTGGGC 60.749 66.667 13.71 0.00 39.88 5.36
1190 1309 4.357279 AGCTGAGCTGGTTGGGCC 62.357 66.667 5.97 0.00 37.57 5.80
1225 1344 4.825679 GGGTGGGAGGAGGGGAGG 62.826 77.778 0.00 0.00 0.00 4.30
1226 1345 4.825679 GGTGGGAGGAGGGGAGGG 62.826 77.778 0.00 0.00 0.00 4.30
1227 1346 4.026357 GTGGGAGGAGGGGAGGGT 62.026 72.222 0.00 0.00 0.00 4.34
1230 1349 4.423209 GGAGGAGGGGAGGGTGCT 62.423 72.222 0.00 0.00 0.00 4.40
1231 1350 2.766229 GAGGAGGGGAGGGTGCTC 60.766 72.222 0.00 0.00 0.00 4.26
1261 1380 4.087892 CGGTGGTGGAGGAGGCAG 62.088 72.222 0.00 0.00 0.00 4.85
1262 1381 3.721706 GGTGGTGGAGGAGGCAGG 61.722 72.222 0.00 0.00 0.00 4.85
1263 1382 3.721706 GTGGTGGAGGAGGCAGGG 61.722 72.222 0.00 0.00 0.00 4.45
1264 1383 3.940480 TGGTGGAGGAGGCAGGGA 61.940 66.667 0.00 0.00 0.00 4.20
1273 1392 3.626596 AGGCAGGGAAGGGGGAGA 61.627 66.667 0.00 0.00 0.00 3.71
1281 1400 0.253207 GGAAGGGGGAGAAGGAGGAA 60.253 60.000 0.00 0.00 0.00 3.36
1283 1402 0.253394 AAGGGGGAGAAGGAGGAAGG 60.253 60.000 0.00 0.00 0.00 3.46
1292 1411 1.162951 AAGGAGGAAGGGGAGGAGGA 61.163 60.000 0.00 0.00 0.00 3.71
1602 1747 0.914644 CACCCTCCATCTCCATGTGT 59.085 55.000 0.00 0.00 0.00 3.72
1603 1748 0.914644 ACCCTCCATCTCCATGTGTG 59.085 55.000 0.00 0.00 0.00 3.82
1604 1749 0.914644 CCCTCCATCTCCATGTGTGT 59.085 55.000 0.00 0.00 0.00 3.72
1612 1757 1.351430 CTCCATGTGTGTGCCGTACG 61.351 60.000 8.69 8.69 0.00 3.67
1618 1763 3.161405 GTGTGCCGTACGACGACG 61.161 66.667 18.76 5.58 46.05 5.12
1625 1770 1.862147 CGTACGACGACGGCTTCAG 60.862 63.158 10.44 0.00 46.05 3.02
1632 1777 1.512734 CGACGGCTTCAGCAATTGC 60.513 57.895 23.05 23.05 44.36 3.56
1652 1797 1.735376 TATCGCTTCCTCGGCTCCAC 61.735 60.000 0.00 0.00 0.00 4.02
1653 1798 3.764466 CGCTTCCTCGGCTCCACT 61.764 66.667 0.00 0.00 0.00 4.00
1654 1799 2.125350 GCTTCCTCGGCTCCACTG 60.125 66.667 0.00 0.00 0.00 3.66
1655 1800 2.125350 CTTCCTCGGCTCCACTGC 60.125 66.667 0.00 0.00 0.00 4.40
1656 1801 2.922503 TTCCTCGGCTCCACTGCA 60.923 61.111 0.00 0.00 34.04 4.41
1657 1802 2.849120 CTTCCTCGGCTCCACTGCAG 62.849 65.000 13.48 13.48 34.04 4.41
1686 1831 1.858458 CGCGAATTCTCTGCCGATTTA 59.142 47.619 0.00 0.00 0.00 1.40
1687 1832 2.284150 CGCGAATTCTCTGCCGATTTAA 59.716 45.455 0.00 0.00 0.00 1.52
1688 1833 3.059597 CGCGAATTCTCTGCCGATTTAAT 60.060 43.478 0.00 0.00 0.00 1.40
1689 1834 4.552767 CGCGAATTCTCTGCCGATTTAATT 60.553 41.667 0.00 0.00 0.00 1.40
1690 1835 4.906437 GCGAATTCTCTGCCGATTTAATTC 59.094 41.667 3.52 0.00 32.57 2.17
1691 1836 5.504010 GCGAATTCTCTGCCGATTTAATTCA 60.504 40.000 3.52 0.00 34.52 2.57
1692 1837 6.662616 CGAATTCTCTGCCGATTTAATTCAT 58.337 36.000 3.52 0.00 34.52 2.57
1693 1838 6.576313 CGAATTCTCTGCCGATTTAATTCATG 59.424 38.462 3.52 0.00 34.52 3.07
1696 1841 4.274214 TCTCTGCCGATTTAATTCATGCAG 59.726 41.667 21.41 21.41 40.13 4.41
1697 1842 3.047796 CTGCCGATTTAATTCATGCAGC 58.952 45.455 18.25 0.00 35.61 5.25
1698 1843 2.426381 TGCCGATTTAATTCATGCAGCA 59.574 40.909 0.00 0.00 0.00 4.41
1700 1845 3.489738 GCCGATTTAATTCATGCAGCAGT 60.490 43.478 0.00 0.00 0.00 4.40
1702 1847 5.207768 CCGATTTAATTCATGCAGCAGTAC 58.792 41.667 0.00 0.00 0.00 2.73
1705 1850 6.358822 CGATTTAATTCATGCAGCAGTACATG 59.641 38.462 0.00 0.00 44.05 3.21
1798 2054 4.168291 GAGAGCTTCCCGGGCCTG 62.168 72.222 18.49 3.88 0.00 4.85
1830 2090 0.968901 AAGGACATGCCATGCCAGTG 60.969 55.000 16.83 0.00 40.02 3.66
1832 2092 2.036731 ACATGCCATGCCAGTGCT 59.963 55.556 4.17 0.00 38.71 4.40
1833 2093 0.749091 GACATGCCATGCCAGTGCTA 60.749 55.000 4.17 0.00 38.71 3.49
1834 2094 0.750546 ACATGCCATGCCAGTGCTAG 60.751 55.000 4.17 0.00 38.71 3.42
1899 2166 2.048127 GAAGCTCCTGTTCCGCGT 60.048 61.111 4.92 0.00 0.00 6.01
1906 2173 1.332375 CTCCTGTTCCGCGTTTTGAAA 59.668 47.619 4.92 0.00 0.00 2.69
1911 2178 3.770666 TGTTCCGCGTTTTGAAATTGAA 58.229 36.364 4.92 0.00 0.00 2.69
1912 2179 4.363999 TGTTCCGCGTTTTGAAATTGAAT 58.636 34.783 4.92 0.00 0.00 2.57
1913 2180 4.806247 TGTTCCGCGTTTTGAAATTGAATT 59.194 33.333 4.92 0.00 0.00 2.17
1914 2181 5.292101 TGTTCCGCGTTTTGAAATTGAATTT 59.708 32.000 4.92 2.27 34.64 1.82
1915 2182 5.321983 TCCGCGTTTTGAAATTGAATTTG 57.678 34.783 8.03 0.00 31.47 2.32
1916 2183 5.043903 TCCGCGTTTTGAAATTGAATTTGA 58.956 33.333 8.03 0.00 31.47 2.69
1917 2184 5.694006 TCCGCGTTTTGAAATTGAATTTGAT 59.306 32.000 8.03 0.00 31.47 2.57
1918 2185 6.201806 TCCGCGTTTTGAAATTGAATTTGATT 59.798 30.769 8.03 0.00 31.47 2.57
1919 2186 6.300434 CCGCGTTTTGAAATTGAATTTGATTG 59.700 34.615 8.03 0.00 31.47 2.67
1920 2187 7.062240 CGCGTTTTGAAATTGAATTTGATTGA 58.938 30.769 8.03 0.00 31.47 2.57
1921 2188 7.057118 CGCGTTTTGAAATTGAATTTGATTGAC 59.943 33.333 8.03 0.00 31.47 3.18
1922 2189 7.850003 GCGTTTTGAAATTGAATTTGATTGACA 59.150 29.630 8.03 0.00 31.47 3.58
1923 2190 9.360514 CGTTTTGAAATTGAATTTGATTGACAG 57.639 29.630 8.03 0.00 31.47 3.51
1924 2191 9.161684 GTTTTGAAATTGAATTTGATTGACAGC 57.838 29.630 8.03 0.00 31.47 4.40
1925 2192 7.424227 TTGAAATTGAATTTGATTGACAGCC 57.576 32.000 8.03 0.00 31.47 4.85
1926 2193 5.634439 TGAAATTGAATTTGATTGACAGCCG 59.366 36.000 8.03 0.00 31.47 5.52
1928 2195 1.135717 TGAATTTGATTGACAGCCGCG 60.136 47.619 0.00 0.00 0.00 6.46
2130 2400 2.434884 ACCATGAAGCACGAGCCG 60.435 61.111 0.00 0.00 43.56 5.52
2288 2569 1.542108 GCTCTGAAGGTCTGTGTTGCT 60.542 52.381 0.00 0.00 0.00 3.91
2289 2570 2.141517 CTCTGAAGGTCTGTGTTGCTG 58.858 52.381 0.00 0.00 0.00 4.41
2290 2571 0.590195 CTGAAGGTCTGTGTTGCTGC 59.410 55.000 0.00 0.00 0.00 5.25
2352 2642 4.097361 GGGAAGGCCGTCCTCACC 62.097 72.222 32.88 15.72 43.40 4.02
2451 2741 0.108138 CCAAGGTGGAGGATCGTGTC 60.108 60.000 0.00 0.00 40.96 3.67
2492 2782 0.030092 TTCCCCTCCCCTCGATCAAT 60.030 55.000 0.00 0.00 0.00 2.57
2493 2783 0.764369 TCCCCTCCCCTCGATCAATG 60.764 60.000 0.00 0.00 0.00 2.82
2494 2784 1.072159 CCCTCCCCTCGATCAATGC 59.928 63.158 0.00 0.00 0.00 3.56
2495 2785 1.699054 CCCTCCCCTCGATCAATGCA 61.699 60.000 0.00 0.00 0.00 3.96
2496 2786 0.399454 CCTCCCCTCGATCAATGCAT 59.601 55.000 0.00 0.00 0.00 3.96
2499 2789 2.551459 CTCCCCTCGATCAATGCATTTC 59.449 50.000 9.83 5.06 0.00 2.17
2504 2794 3.497640 CCTCGATCAATGCATTTCTCTCC 59.502 47.826 9.83 0.00 0.00 3.71
2508 2798 4.211584 CGATCAATGCATTTCTCTCCTCTG 59.788 45.833 9.83 0.00 0.00 3.35
2535 2829 0.603569 ACTCCACTGTAGAACTGCCG 59.396 55.000 0.00 0.00 0.00 5.69
2624 2953 2.420628 TGCTGCTGCATGTTTTACAC 57.579 45.000 14.93 0.00 45.31 2.90
2625 2954 1.955778 TGCTGCTGCATGTTTTACACT 59.044 42.857 14.93 0.00 45.31 3.55
2626 2955 2.361757 TGCTGCTGCATGTTTTACACTT 59.638 40.909 14.93 0.00 45.31 3.16
2627 2956 3.181477 TGCTGCTGCATGTTTTACACTTT 60.181 39.130 14.93 0.00 45.31 2.66
2628 2957 3.803778 GCTGCTGCATGTTTTACACTTTT 59.196 39.130 11.11 0.00 39.41 2.27
2629 2958 4.981674 GCTGCTGCATGTTTTACACTTTTA 59.018 37.500 11.11 0.00 39.41 1.52
2630 2959 5.107875 GCTGCTGCATGTTTTACACTTTTAC 60.108 40.000 11.11 0.00 39.41 2.01
2686 3015 3.412386 AGGTTTCTATTCACAGTGCCAC 58.588 45.455 0.00 0.00 0.00 5.01
2697 3026 1.524621 AGTGCCACTGTGAGTGCAC 60.525 57.895 24.04 24.04 44.63 4.57
2715 3044 3.264104 GCACATCATTGGTCAAAATGGG 58.736 45.455 11.47 9.37 37.98 4.00
2739 3068 8.622157 GGGTCTTTTATATCTGACCTTTTTAGC 58.378 37.037 10.28 0.00 45.85 3.09
2752 3081 5.254115 ACCTTTTTAGCGCCTTCTTAGAAT 58.746 37.500 2.29 0.00 0.00 2.40
2781 3112 0.457337 GGCATCAAGCTGGCTTTTCG 60.457 55.000 4.98 0.00 44.79 3.46
2802 3133 8.420374 TTTCGAAAGCACCTATTCATTACTAG 57.580 34.615 6.47 0.00 0.00 2.57
2837 3168 4.679654 GTGGTTATTTGGAACTTGAAAGCG 59.320 41.667 0.00 0.00 0.00 4.68
2846 3177 3.300857 GAACTTGAAAGCGCCTCTTTTC 58.699 45.455 2.29 8.44 44.58 2.29
2855 3186 1.197036 GCGCCTCTTTTCAGGTGTAAC 59.803 52.381 0.00 0.00 44.79 2.50
2856 3187 2.489971 CGCCTCTTTTCAGGTGTAACA 58.510 47.619 0.00 0.00 39.00 2.41
2901 3233 8.625467 AGTAAGATTCCCCTAACTAACTGAAT 57.375 34.615 0.00 0.00 0.00 2.57
2903 3235 9.682465 GTAAGATTCCCCTAACTAACTGAATTT 57.318 33.333 0.00 0.00 0.00 1.82
2950 3284 1.408969 ACCGCAAACTGAACCCATTT 58.591 45.000 0.00 0.00 0.00 2.32
2970 3306 7.767198 CCCATTTTGATTTTGCTTGACAGATAT 59.233 33.333 0.00 0.00 0.00 1.63
3013 3349 4.936891 AGAGTCACTTGTGGAAAATTTGC 58.063 39.130 0.64 0.00 0.00 3.68
3075 3411 6.377780 TGTTTATGATGTCACAAACCATTCG 58.622 36.000 12.74 0.00 41.22 3.34
3144 3480 1.889105 CTCACACACCTGCACGCTT 60.889 57.895 0.00 0.00 0.00 4.68
3324 3661 2.313317 TGGTCTGCTATTACTACCCCG 58.687 52.381 0.00 0.00 0.00 5.73
3333 3670 1.259609 TTACTACCCCGTCTGGTGTG 58.740 55.000 0.00 0.00 39.53 3.82
3485 3822 4.398044 TCAGGTCAAGTTTTGTTGGAAGTC 59.602 41.667 0.00 0.00 0.00 3.01
3639 3976 5.532406 TCCTATGCATTCCAGCTTATTGTTC 59.468 40.000 3.54 0.00 34.99 3.18
3640 3977 5.300034 CCTATGCATTCCAGCTTATTGTTCA 59.700 40.000 3.54 0.00 34.99 3.18
3641 3978 5.864418 ATGCATTCCAGCTTATTGTTCAT 57.136 34.783 0.00 0.00 34.99 2.57
3642 3979 5.001237 TGCATTCCAGCTTATTGTTCATG 57.999 39.130 0.00 0.00 34.99 3.07
3780 4117 2.676748 ACTGCCCAAATCTGTGGAAAA 58.323 42.857 0.00 0.00 41.65 2.29
3972 4309 7.775120 TCAGAAATTGGAAAAATATCCTCAGC 58.225 34.615 0.00 0.00 40.35 4.26
3975 4312 5.859205 ATTGGAAAAATATCCTCAGCCAC 57.141 39.130 0.00 0.00 40.35 5.01
4026 4363 3.187637 TCGCCCTAACGTTTCTTCATTTG 59.812 43.478 5.91 0.00 0.00 2.32
4321 4660 9.984190 GTTTACTTAAATTCAATTACACCCCAA 57.016 29.630 0.00 0.00 0.00 4.12
4643 4982 5.009710 TGTCACTCTTGTAGTAAGTGTGGAG 59.990 44.000 16.85 0.00 40.94 3.86
4727 5066 9.107177 CAAGCTGATAGTTCAACATCTAGAAAT 57.893 33.333 0.00 0.00 0.00 2.17
4748 5087 0.336048 ATGGTGGGACTGGAATTGGG 59.664 55.000 0.00 0.00 0.00 4.12
5084 5423 7.773690 ACTTCGCTAACCAGGTATTTATCAATT 59.226 33.333 0.00 0.00 0.00 2.32
5354 7321 6.093495 TGCTTTCATGTTGTATTGCTACTACC 59.907 38.462 0.00 0.00 34.08 3.18
5364 7331 7.609760 TGTATTGCTACTACCATGAAGTTTG 57.390 36.000 6.07 2.62 0.00 2.93
5427 7394 7.390027 TGGAGACTCCTTATTTTCAGAAAGAG 58.610 38.462 22.14 7.30 37.46 2.85
5457 7424 7.059488 CACTTACTTATTTTGTAAGCAAGTGCG 59.941 37.037 19.71 6.17 44.75 5.34
5803 7770 4.034975 GCAGCTTGTCTATTCCAATCACTC 59.965 45.833 0.00 0.00 0.00 3.51
6007 7974 1.532868 CTTGAACTTCTGCAAGTCCCG 59.467 52.381 0.00 0.00 42.45 5.14
6013 7980 0.749818 TTCTGCAAGTCCCGCACAAA 60.750 50.000 0.00 0.00 35.08 2.83
6143 8111 4.226620 ACATCTAACCCTAAAACCCGACAT 59.773 41.667 0.00 0.00 0.00 3.06
6179 8159 5.350633 CACAATCACATGACAACCTGTTTT 58.649 37.500 0.00 0.00 0.00 2.43
6317 8297 7.875971 GGAATAGTACCAAATTCCAAGCTATG 58.124 38.462 19.82 0.00 46.95 2.23
6318 8298 7.719633 GGAATAGTACCAAATTCCAAGCTATGA 59.280 37.037 19.82 0.00 46.95 2.15
6319 8299 9.289782 GAATAGTACCAAATTCCAAGCTATGAT 57.710 33.333 0.00 0.00 0.00 2.45
6323 8303 6.855763 ACCAAATTCCAAGCTATGATTGAA 57.144 33.333 0.00 0.00 0.00 2.69
6327 8307 8.148351 CCAAATTCCAAGCTATGATTGAATGAT 58.852 33.333 0.00 0.00 0.00 2.45
6451 8437 8.608844 ACCAAAGCTAGTATACAGAAATATGC 57.391 34.615 5.50 0.00 0.00 3.14
6467 8453 0.035439 ATGCGGTGGTTCCTTGTAGG 60.035 55.000 0.00 0.00 36.46 3.18
6470 8456 1.816572 GCGGTGGTTCCTTGTAGGTTT 60.817 52.381 0.00 0.00 36.53 3.27
6509 8495 2.092323 GGCCTCATGGGTGTTTAACTC 58.908 52.381 0.00 0.00 37.43 3.01
6525 8511 9.141400 GTGTTTAACTCGAGTCAATATCTCTTT 57.859 33.333 20.33 0.44 0.00 2.52
6558 8567 4.393834 ACAGTACATATTGGTTGCACACA 58.606 39.130 0.00 0.00 0.00 3.72
6590 8599 4.130118 CTGAGTCAATATACCACCCTTGC 58.870 47.826 0.00 0.00 0.00 4.01
6679 8688 2.798976 TTGAAGCAAAGGCACATGAC 57.201 45.000 0.00 0.00 44.61 3.06
6684 8693 0.961019 GCAAAGGCACATGACCAGAA 59.039 50.000 0.00 0.00 40.72 3.02
6924 8933 0.109179 CATTCCGGTGTGTGCATTGG 60.109 55.000 0.00 0.00 0.00 3.16
6926 8935 4.054825 CCGGTGTGTGCATTGGCC 62.055 66.667 0.00 0.00 40.13 5.36
6979 8988 4.231718 TGTTTTGTGCGATCCTTTAACC 57.768 40.909 0.00 0.00 0.00 2.85
6994 9003 2.620251 TAACCGAGGATGCATTCTGG 57.380 50.000 13.71 16.02 0.00 3.86
7059 9068 0.389948 GATCAAGTTCGTGGCGAGGT 60.390 55.000 0.00 0.00 37.14 3.85
7080 9089 1.153549 GCAGCCCAGAGAGGTAACG 60.154 63.158 0.00 0.00 46.39 3.18
7116 9125 0.817654 GTATTGGCAGGCCCTGTTTC 59.182 55.000 13.35 3.37 33.43 2.78
7127 9136 3.053917 AGGCCCTGTTTCATTACCGTAAT 60.054 43.478 0.00 0.00 0.00 1.89
7169 9178 2.664851 CGAGCACTGCGTTGGGAA 60.665 61.111 0.00 0.00 0.00 3.97
7170 9179 2.671177 CGAGCACTGCGTTGGGAAG 61.671 63.158 0.00 0.00 0.00 3.46
7171 9180 2.970974 GAGCACTGCGTTGGGAAGC 61.971 63.158 0.00 0.00 0.00 3.86
7172 9181 3.286751 GCACTGCGTTGGGAAGCA 61.287 61.111 0.00 0.00 41.55 3.91
7176 9185 2.282391 TGCGTTGGGAAGCAGCAT 60.282 55.556 0.00 0.00 38.59 3.79
7186 9211 2.154462 GGAAGCAGCATGTGTACTGTT 58.846 47.619 0.00 0.00 39.31 3.16
7192 9217 0.093026 GCATGTGTACTGTTCGCGTC 59.907 55.000 5.77 1.06 0.00 5.19
7277 9322 2.521547 AAGGCTGGGAAAAGATGAGG 57.478 50.000 0.00 0.00 0.00 3.86
7297 9342 9.435688 GATGAGGTTAATTTTTGGCTGTTTTAT 57.564 29.630 0.00 0.00 0.00 1.40
7298 9343 9.791801 ATGAGGTTAATTTTTGGCTGTTTTATT 57.208 25.926 0.00 0.00 0.00 1.40
7299 9344 9.620259 TGAGGTTAATTTTTGGCTGTTTTATTT 57.380 25.926 0.00 0.00 0.00 1.40
7300 9345 9.877137 GAGGTTAATTTTTGGCTGTTTTATTTG 57.123 29.630 0.00 0.00 0.00 2.32
7365 9412 0.810648 TGGCTCGATTGCATTTCCAC 59.189 50.000 0.00 0.00 34.04 4.02
7401 9448 6.882610 TGGGAGGAAATAATGAATCGATTG 57.117 37.500 16.96 0.00 0.00 2.67
7447 9495 5.854431 GTTGAATCCAACTCTCAACTCTC 57.146 43.478 6.87 0.00 46.84 3.20
7449 9497 5.551305 TGAATCCAACTCTCAACTCTCAA 57.449 39.130 0.00 0.00 0.00 3.02
7450 9498 6.119240 TGAATCCAACTCTCAACTCTCAAT 57.881 37.500 0.00 0.00 0.00 2.57
7451 9499 7.244886 TGAATCCAACTCTCAACTCTCAATA 57.755 36.000 0.00 0.00 0.00 1.90
7452 9500 7.855375 TGAATCCAACTCTCAACTCTCAATAT 58.145 34.615 0.00 0.00 0.00 1.28
7454 9502 9.171877 GAATCCAACTCTCAACTCTCAATATTT 57.828 33.333 0.00 0.00 0.00 1.40
7455 9503 7.912056 TCCAACTCTCAACTCTCAATATTTG 57.088 36.000 0.00 0.00 0.00 2.32
7456 9504 6.881065 TCCAACTCTCAACTCTCAATATTTGG 59.119 38.462 0.00 0.00 0.00 3.28
7457 9505 6.881065 CCAACTCTCAACTCTCAATATTTGGA 59.119 38.462 0.00 0.00 32.05 3.53
7458 9506 7.391554 CCAACTCTCAACTCTCAATATTTGGAA 59.608 37.037 0.00 0.00 32.05 3.53
7459 9507 8.449397 CAACTCTCAACTCTCAATATTTGGAAG 58.551 37.037 0.00 0.00 0.00 3.46
7460 9508 7.911651 ACTCTCAACTCTCAATATTTGGAAGA 58.088 34.615 0.00 0.00 0.00 2.87
7461 9509 8.378565 ACTCTCAACTCTCAATATTTGGAAGAA 58.621 33.333 0.00 0.00 0.00 2.52
7462 9510 9.224267 CTCTCAACTCTCAATATTTGGAAGAAA 57.776 33.333 0.00 0.00 0.00 2.52
7463 9511 9.745018 TCTCAACTCTCAATATTTGGAAGAAAT 57.255 29.630 0.00 0.00 0.00 2.17
7656 9708 7.100458 ACAATTTGCGCTTATAAGATCCTTT 57.900 32.000 16.85 0.00 0.00 3.11
7687 9739 4.360563 GAGCTTGGAATTTGCAGATCATG 58.639 43.478 0.00 0.00 0.00 3.07
7711 9763 2.223525 GCTGAAAGGAGATGAGCAATGC 60.224 50.000 0.00 0.00 0.00 3.56
7737 9789 1.544246 CTGTGATACACCACCTCGTCA 59.456 52.381 0.00 0.00 36.26 4.35
7738 9790 1.271379 TGTGATACACCACCTCGTCAC 59.729 52.381 0.00 0.00 36.26 3.67
7739 9791 1.544691 GTGATACACCACCTCGTCACT 59.455 52.381 0.00 0.00 34.63 3.41
7740 9792 1.544246 TGATACACCACCTCGTCACTG 59.456 52.381 0.00 0.00 0.00 3.66
7823 11097 2.008329 CTGAAACTCATCCTGCTCAGC 58.992 52.381 0.00 0.00 0.00 4.26
7855 11129 1.484240 GAGAATCAGACACAGGGGAGG 59.516 57.143 0.00 0.00 33.17 4.30
7856 11130 0.107459 GAATCAGACACAGGGGAGGC 60.107 60.000 0.00 0.00 0.00 4.70
8037 11316 2.093128 ACCCAGACGTGTGTTCTTTCTT 60.093 45.455 12.16 0.00 0.00 2.52
8064 11343 3.454082 CCTACAAGATCAGGAGAAAGCCT 59.546 47.826 0.00 0.00 39.37 4.58
8214 11495 0.097150 GCTTCGAAGAACGGCCAATC 59.903 55.000 28.95 0.00 45.90 2.67
8227 11508 1.933115 GCCAATCCGAATTGTGCCGT 61.933 55.000 0.00 0.00 40.63 5.68
8275 11563 7.994911 TGGCATGATAGTTGTATCTTCTGAAAT 59.005 33.333 0.00 0.00 36.70 2.17
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
2 3 5.363939 GAGCAATTCCAGCTTAGTCTATGT 58.636 41.667 0.00 0.00 43.58 2.29
3 4 4.447054 CGAGCAATTCCAGCTTAGTCTATG 59.553 45.833 0.00 0.00 43.58 2.23
4 5 4.626042 CGAGCAATTCCAGCTTAGTCTAT 58.374 43.478 0.00 0.00 43.58 1.98
5 6 3.738281 GCGAGCAATTCCAGCTTAGTCTA 60.738 47.826 0.00 0.00 43.58 2.59
6 7 2.898705 CGAGCAATTCCAGCTTAGTCT 58.101 47.619 0.00 0.00 43.58 3.24
9 10 1.661341 AGCGAGCAATTCCAGCTTAG 58.339 50.000 0.00 0.00 43.58 2.18
10 11 2.430694 TCTAGCGAGCAATTCCAGCTTA 59.569 45.455 0.00 0.00 43.58 3.09
13 14 0.933796 GTCTAGCGAGCAATTCCAGC 59.066 55.000 0.00 0.00 0.00 4.85
14 15 2.200067 CTGTCTAGCGAGCAATTCCAG 58.800 52.381 0.00 0.00 0.00 3.86
15 16 1.740380 GCTGTCTAGCGAGCAATTCCA 60.740 52.381 7.69 0.00 40.67 3.53
16 17 0.933796 GCTGTCTAGCGAGCAATTCC 59.066 55.000 7.69 0.00 40.67 3.01
52 53 4.980805 TGGCAGACCGCAACGACC 62.981 66.667 0.00 0.00 45.17 4.79
53 54 3.414700 CTGGCAGACCGCAACGAC 61.415 66.667 9.42 0.00 45.17 4.34
54 55 4.680237 CCTGGCAGACCGCAACGA 62.680 66.667 17.94 0.00 45.17 3.85
55 56 4.680237 TCCTGGCAGACCGCAACG 62.680 66.667 17.94 0.00 45.17 4.10
56 57 2.743928 CTCCTGGCAGACCGCAAC 60.744 66.667 17.94 0.00 45.17 4.17
57 58 2.922503 TCTCCTGGCAGACCGCAA 60.923 61.111 17.94 0.00 45.17 4.85
58 59 3.695606 GTCTCCTGGCAGACCGCA 61.696 66.667 17.94 0.00 45.17 5.69
62 63 4.459089 GGCGGTCTCCTGGCAGAC 62.459 72.222 17.94 6.43 41.99 3.51
77 78 3.327404 TTCCTTCTCCACCCCGGC 61.327 66.667 0.00 0.00 33.14 6.13
78 79 2.670148 CCTTCCTTCTCCACCCCGG 61.670 68.421 0.00 0.00 0.00 5.73
79 80 2.990479 CCTTCCTTCTCCACCCCG 59.010 66.667 0.00 0.00 0.00 5.73
80 81 1.916206 GAGCCTTCCTTCTCCACCCC 61.916 65.000 0.00 0.00 0.00 4.95
81 82 1.201429 TGAGCCTTCCTTCTCCACCC 61.201 60.000 0.00 0.00 0.00 4.61
82 83 0.035915 GTGAGCCTTCCTTCTCCACC 60.036 60.000 0.00 0.00 0.00 4.61
83 84 0.687354 TGTGAGCCTTCCTTCTCCAC 59.313 55.000 0.00 0.00 0.00 4.02
84 85 1.280133 CATGTGAGCCTTCCTTCTCCA 59.720 52.381 0.00 0.00 0.00 3.86
85 86 1.407989 CCATGTGAGCCTTCCTTCTCC 60.408 57.143 0.00 0.00 0.00 3.71
86 87 1.407989 CCCATGTGAGCCTTCCTTCTC 60.408 57.143 0.00 0.00 0.00 2.87
87 88 0.622665 CCCATGTGAGCCTTCCTTCT 59.377 55.000 0.00 0.00 0.00 2.85
88 89 0.394899 CCCCATGTGAGCCTTCCTTC 60.395 60.000 0.00 0.00 0.00 3.46
89 90 1.142688 ACCCCATGTGAGCCTTCCTT 61.143 55.000 0.00 0.00 0.00 3.36
90 91 0.253160 TACCCCATGTGAGCCTTCCT 60.253 55.000 0.00 0.00 0.00 3.36
91 92 0.846693 ATACCCCATGTGAGCCTTCC 59.153 55.000 0.00 0.00 0.00 3.46
92 93 1.541233 CGATACCCCATGTGAGCCTTC 60.541 57.143 0.00 0.00 0.00 3.46
93 94 0.469917 CGATACCCCATGTGAGCCTT 59.530 55.000 0.00 0.00 0.00 4.35
94 95 2.044806 GCGATACCCCATGTGAGCCT 62.045 60.000 0.00 0.00 0.00 4.58
95 96 1.598130 GCGATACCCCATGTGAGCC 60.598 63.158 0.00 0.00 0.00 4.70
96 97 1.598130 GGCGATACCCCATGTGAGC 60.598 63.158 0.00 0.00 0.00 4.26
97 98 1.300931 CGGCGATACCCCATGTGAG 60.301 63.158 0.00 0.00 33.26 3.51
98 99 1.118965 ATCGGCGATACCCCATGTGA 61.119 55.000 22.68 0.00 33.26 3.58
99 100 0.606096 TATCGGCGATACCCCATGTG 59.394 55.000 24.61 0.00 33.26 3.21
100 101 1.207089 CATATCGGCGATACCCCATGT 59.793 52.381 29.84 11.15 33.26 3.21
101 102 1.473257 CCATATCGGCGATACCCCATG 60.473 57.143 29.84 23.29 33.26 3.66
102 103 0.830648 CCATATCGGCGATACCCCAT 59.169 55.000 29.84 13.65 33.26 4.00
103 104 0.251877 TCCATATCGGCGATACCCCA 60.252 55.000 29.84 11.78 33.26 4.96
104 105 1.120530 ATCCATATCGGCGATACCCC 58.879 55.000 29.84 0.00 33.26 4.95
105 106 1.202533 CCATCCATATCGGCGATACCC 60.203 57.143 29.84 0.00 33.26 3.69
106 107 1.754803 TCCATCCATATCGGCGATACC 59.245 52.381 29.84 0.00 33.14 2.73
107 108 3.319405 AGATCCATCCATATCGGCGATAC 59.681 47.826 29.84 14.66 33.14 2.24
108 109 3.566351 AGATCCATCCATATCGGCGATA 58.434 45.455 29.45 29.45 33.14 2.92
109 110 2.392662 AGATCCATCCATATCGGCGAT 58.607 47.619 26.95 26.95 33.14 4.58
110 111 1.852633 AGATCCATCCATATCGGCGA 58.147 50.000 13.87 13.87 33.14 5.54
111 112 2.274437 CAAGATCCATCCATATCGGCG 58.726 52.381 0.00 0.00 33.14 6.46
112 113 3.340814 ACAAGATCCATCCATATCGGC 57.659 47.619 0.00 0.00 33.14 5.54
113 114 5.667539 AGTACAAGATCCATCCATATCGG 57.332 43.478 0.00 0.00 0.00 4.18
114 115 7.397892 AGTAGTACAAGATCCATCCATATCG 57.602 40.000 2.52 0.00 0.00 2.92
115 116 9.469097 ACTAGTAGTACAAGATCCATCCATATC 57.531 37.037 0.00 0.00 0.00 1.63
116 117 9.830186 AACTAGTAGTACAAGATCCATCCATAT 57.170 33.333 2.50 0.00 0.00 1.78
117 118 9.656323 AAACTAGTAGTACAAGATCCATCCATA 57.344 33.333 2.50 0.00 0.00 2.74
118 119 8.554490 AAACTAGTAGTACAAGATCCATCCAT 57.446 34.615 2.50 0.00 0.00 3.41
119 120 7.973048 AAACTAGTAGTACAAGATCCATCCA 57.027 36.000 2.50 0.00 0.00 3.41
120 121 9.968870 CTTAAACTAGTAGTACAAGATCCATCC 57.031 37.037 14.48 0.00 0.00 3.51
143 144 9.746457 ACAGAGCACATACTATATCTGATCTTA 57.254 33.333 6.98 0.00 38.02 2.10
144 145 8.648698 ACAGAGCACATACTATATCTGATCTT 57.351 34.615 6.98 0.00 38.02 2.40
145 146 9.746457 TTACAGAGCACATACTATATCTGATCT 57.254 33.333 6.98 0.00 38.02 2.75
147 148 9.527157 ACTTACAGAGCACATACTATATCTGAT 57.473 33.333 6.98 0.00 38.02 2.90
148 149 8.926092 ACTTACAGAGCACATACTATATCTGA 57.074 34.615 6.98 0.00 38.02 3.27
149 150 9.404348 CAACTTACAGAGCACATACTATATCTG 57.596 37.037 0.00 0.00 39.96 2.90
150 151 8.580720 CCAACTTACAGAGCACATACTATATCT 58.419 37.037 0.00 0.00 0.00 1.98
151 152 7.329717 GCCAACTTACAGAGCACATACTATATC 59.670 40.741 0.00 0.00 0.00 1.63
152 153 7.155328 GCCAACTTACAGAGCACATACTATAT 58.845 38.462 0.00 0.00 0.00 0.86
153 154 6.097696 TGCCAACTTACAGAGCACATACTATA 59.902 38.462 0.00 0.00 0.00 1.31
154 155 5.104941 TGCCAACTTACAGAGCACATACTAT 60.105 40.000 0.00 0.00 0.00 2.12
155 156 4.221924 TGCCAACTTACAGAGCACATACTA 59.778 41.667 0.00 0.00 0.00 1.82
156 157 3.007940 TGCCAACTTACAGAGCACATACT 59.992 43.478 0.00 0.00 0.00 2.12
157 158 3.334691 TGCCAACTTACAGAGCACATAC 58.665 45.455 0.00 0.00 0.00 2.39
158 159 3.694043 TGCCAACTTACAGAGCACATA 57.306 42.857 0.00 0.00 0.00 2.29
159 160 2.566833 TGCCAACTTACAGAGCACAT 57.433 45.000 0.00 0.00 0.00 3.21
162 163 0.391228 TCGTGCCAACTTACAGAGCA 59.609 50.000 0.00 0.00 0.00 4.26
163 164 0.790814 GTCGTGCCAACTTACAGAGC 59.209 55.000 0.00 0.00 0.00 4.09
164 165 1.792949 GTGTCGTGCCAACTTACAGAG 59.207 52.381 0.00 0.00 0.00 3.35
165 166 1.860676 GTGTCGTGCCAACTTACAGA 58.139 50.000 0.00 0.00 0.00 3.41
166 167 0.506932 CGTGTCGTGCCAACTTACAG 59.493 55.000 0.00 0.00 0.00 2.74
167 168 0.102663 TCGTGTCGTGCCAACTTACA 59.897 50.000 0.00 0.00 0.00 2.41
168 169 0.505655 GTCGTGTCGTGCCAACTTAC 59.494 55.000 0.00 0.00 0.00 2.34
169 170 0.102663 TGTCGTGTCGTGCCAACTTA 59.897 50.000 0.00 0.00 0.00 2.24
170 171 1.153529 TGTCGTGTCGTGCCAACTT 60.154 52.632 0.00 0.00 0.00 2.66
171 172 1.881252 GTGTCGTGTCGTGCCAACT 60.881 57.895 0.00 0.00 0.00 3.16
172 173 2.624264 GTGTCGTGTCGTGCCAAC 59.376 61.111 0.00 0.00 0.00 3.77
173 174 2.957489 CGTGTCGTGTCGTGCCAA 60.957 61.111 0.00 0.00 0.00 4.52
174 175 3.890221 TCGTGTCGTGTCGTGCCA 61.890 61.111 0.00 0.00 0.00 4.92
175 176 3.392440 GTCGTGTCGTGTCGTGCC 61.392 66.667 0.00 0.00 0.00 5.01
176 177 2.652813 TGTCGTGTCGTGTCGTGC 60.653 61.111 0.00 0.00 0.00 5.34
177 178 2.623427 CGTGTCGTGTCGTGTCGTG 61.623 63.158 0.00 0.00 0.00 4.35
178 179 2.351548 CGTGTCGTGTCGTGTCGT 60.352 61.111 0.00 0.00 0.00 4.34
179 180 2.052854 TCGTGTCGTGTCGTGTCG 60.053 61.111 0.00 0.00 0.00 4.35
180 181 1.297819 TGTCGTGTCGTGTCGTGTC 60.298 57.895 0.00 0.00 0.00 3.67
181 182 1.584483 GTGTCGTGTCGTGTCGTGT 60.584 57.895 0.00 0.00 0.00 4.49
182 183 2.623427 CGTGTCGTGTCGTGTCGTG 61.623 63.158 0.00 0.00 0.00 4.35
183 184 2.351548 CGTGTCGTGTCGTGTCGT 60.352 61.111 0.00 0.00 0.00 4.34
184 185 3.739056 GCGTGTCGTGTCGTGTCG 61.739 66.667 0.00 0.00 0.00 4.35
185 186 2.652813 TGCGTGTCGTGTCGTGTC 60.653 61.111 0.00 0.00 0.00 3.67
186 187 2.952783 GTGCGTGTCGTGTCGTGT 60.953 61.111 0.00 0.00 0.00 4.49
187 188 3.688330 GGTGCGTGTCGTGTCGTG 61.688 66.667 0.00 0.00 0.00 4.35
188 189 4.196108 TGGTGCGTGTCGTGTCGT 62.196 61.111 0.00 0.00 0.00 4.34
189 190 3.394874 CTGGTGCGTGTCGTGTCG 61.395 66.667 0.00 0.00 0.00 4.35
190 191 3.702555 GCTGGTGCGTGTCGTGTC 61.703 66.667 0.00 0.00 0.00 3.67
191 192 3.733344 AAGCTGGTGCGTGTCGTGT 62.733 57.895 0.00 0.00 45.42 4.49
192 193 2.967076 AAGCTGGTGCGTGTCGTG 60.967 61.111 0.00 0.00 45.42 4.35
193 194 2.967076 CAAGCTGGTGCGTGTCGT 60.967 61.111 0.00 0.00 45.42 4.34
194 195 3.716006 CCAAGCTGGTGCGTGTCG 61.716 66.667 0.00 0.00 45.01 4.35
195 196 2.280797 TCCAAGCTGGTGCGTGTC 60.281 61.111 0.00 0.00 45.01 3.67
196 197 2.281070 CTCCAAGCTGGTGCGTGT 60.281 61.111 0.00 0.00 45.01 4.49
197 198 2.031012 TCTCCAAGCTGGTGCGTG 59.969 61.111 0.00 0.00 45.82 5.34
198 199 2.031163 GTCTCCAAGCTGGTGCGT 59.969 61.111 0.00 0.00 45.42 5.24
199 200 2.842394 ATCGTCTCCAAGCTGGTGCG 62.842 60.000 0.00 1.55 45.42 5.34
200 201 1.078848 ATCGTCTCCAAGCTGGTGC 60.079 57.895 0.00 0.00 39.03 5.01
201 202 0.742281 CCATCGTCTCCAAGCTGGTG 60.742 60.000 0.00 0.00 39.03 4.17
202 203 1.194781 ACCATCGTCTCCAAGCTGGT 61.195 55.000 0.00 0.00 39.03 4.00
203 204 0.036010 AACCATCGTCTCCAAGCTGG 60.036 55.000 0.00 0.00 39.43 4.85
204 205 1.081892 CAACCATCGTCTCCAAGCTG 58.918 55.000 0.00 0.00 0.00 4.24
205 206 0.976641 TCAACCATCGTCTCCAAGCT 59.023 50.000 0.00 0.00 0.00 3.74
206 207 1.363744 CTCAACCATCGTCTCCAAGC 58.636 55.000 0.00 0.00 0.00 4.01
207 208 1.066573 AGCTCAACCATCGTCTCCAAG 60.067 52.381 0.00 0.00 0.00 3.61
208 209 0.976641 AGCTCAACCATCGTCTCCAA 59.023 50.000 0.00 0.00 0.00 3.53
209 210 0.532573 GAGCTCAACCATCGTCTCCA 59.467 55.000 9.40 0.00 0.00 3.86
210 211 0.179097 GGAGCTCAACCATCGTCTCC 60.179 60.000 17.19 0.00 34.13 3.71
211 212 0.526524 CGGAGCTCAACCATCGTCTC 60.527 60.000 17.19 0.00 0.00 3.36
212 213 0.965866 TCGGAGCTCAACCATCGTCT 60.966 55.000 17.19 0.00 0.00 4.18
213 214 0.103208 ATCGGAGCTCAACCATCGTC 59.897 55.000 17.19 0.00 0.00 4.20
214 215 0.537188 AATCGGAGCTCAACCATCGT 59.463 50.000 17.19 0.00 0.00 3.73
215 216 2.509052 TAATCGGAGCTCAACCATCG 57.491 50.000 17.19 8.78 0.00 3.84
216 217 3.496130 CACATAATCGGAGCTCAACCATC 59.504 47.826 17.19 0.00 0.00 3.51
217 218 3.118261 ACACATAATCGGAGCTCAACCAT 60.118 43.478 17.19 0.00 0.00 3.55
218 219 2.236146 ACACATAATCGGAGCTCAACCA 59.764 45.455 17.19 0.00 0.00 3.67
219 220 2.866762 GACACATAATCGGAGCTCAACC 59.133 50.000 17.19 0.00 0.00 3.77
220 221 2.535984 CGACACATAATCGGAGCTCAAC 59.464 50.000 17.19 0.00 35.92 3.18
221 222 2.809446 CGACACATAATCGGAGCTCAA 58.191 47.619 17.19 2.91 35.92 3.02
222 223 1.536072 GCGACACATAATCGGAGCTCA 60.536 52.381 17.19 0.00 39.99 4.26
223 224 1.132588 GCGACACATAATCGGAGCTC 58.867 55.000 4.71 4.71 39.99 4.09
224 225 0.595053 CGCGACACATAATCGGAGCT 60.595 55.000 0.00 0.00 39.99 4.09
225 226 0.870307 ACGCGACACATAATCGGAGC 60.870 55.000 15.93 0.00 39.99 4.70
226 227 2.041966 GTACGCGACACATAATCGGAG 58.958 52.381 15.93 0.00 39.99 4.63
227 228 1.595246 CGTACGCGACACATAATCGGA 60.595 52.381 15.93 0.00 39.99 4.55
228 229 0.768266 CGTACGCGACACATAATCGG 59.232 55.000 15.93 0.00 39.99 4.18
229 230 1.459756 ACGTACGCGACACATAATCG 58.540 50.000 15.93 6.12 42.55 3.34
230 231 5.450385 GGATATACGTACGCGACACATAATC 59.550 44.000 15.93 8.06 42.00 1.75
231 232 5.106594 TGGATATACGTACGCGACACATAAT 60.107 40.000 15.93 6.37 42.00 1.28
232 233 4.213059 TGGATATACGTACGCGACACATAA 59.787 41.667 15.93 0.00 42.00 1.90
233 234 3.745458 TGGATATACGTACGCGACACATA 59.255 43.478 15.93 3.14 42.00 2.29
234 235 2.549329 TGGATATACGTACGCGACACAT 59.451 45.455 15.93 0.39 42.00 3.21
235 236 1.939255 TGGATATACGTACGCGACACA 59.061 47.619 15.93 5.11 42.00 3.72
236 237 2.668617 TGGATATACGTACGCGACAC 57.331 50.000 15.93 9.54 42.00 3.67
237 238 3.902261 AATGGATATACGTACGCGACA 57.098 42.857 15.93 6.65 42.00 4.35
238 239 4.554973 GGTTAATGGATATACGTACGCGAC 59.445 45.833 15.93 5.79 42.00 5.19
239 240 4.215185 TGGTTAATGGATATACGTACGCGA 59.785 41.667 15.93 3.70 42.00 5.87
240 241 4.475028 TGGTTAATGGATATACGTACGCG 58.525 43.478 16.72 3.53 44.93 6.01
241 242 4.325472 GCTGGTTAATGGATATACGTACGC 59.675 45.833 16.72 0.00 0.00 4.42
242 243 5.706916 AGCTGGTTAATGGATATACGTACG 58.293 41.667 15.01 15.01 0.00 3.67
243 244 7.824672 ACTAGCTGGTTAATGGATATACGTAC 58.175 38.462 0.00 0.00 0.00 3.67
244 245 9.690913 ATACTAGCTGGTTAATGGATATACGTA 57.309 33.333 8.46 0.00 0.00 3.57
245 246 6.912951 ACTAGCTGGTTAATGGATATACGT 57.087 37.500 0.00 0.00 0.00 3.57
246 247 8.904834 AGATACTAGCTGGTTAATGGATATACG 58.095 37.037 8.46 0.00 0.00 3.06
248 249 9.422681 GGAGATACTAGCTGGTTAATGGATATA 57.577 37.037 8.46 0.00 0.00 0.86
249 250 8.125733 AGGAGATACTAGCTGGTTAATGGATAT 58.874 37.037 8.46 0.00 0.00 1.63
250 251 7.397476 CAGGAGATACTAGCTGGTTAATGGATA 59.603 40.741 8.46 0.00 0.00 2.59
251 252 6.212388 CAGGAGATACTAGCTGGTTAATGGAT 59.788 42.308 8.46 0.00 0.00 3.41
252 253 5.540337 CAGGAGATACTAGCTGGTTAATGGA 59.460 44.000 8.46 0.00 0.00 3.41
253 254 5.279708 CCAGGAGATACTAGCTGGTTAATGG 60.280 48.000 8.46 5.24 0.00 3.16
254 255 5.788450 CCAGGAGATACTAGCTGGTTAATG 58.212 45.833 8.46 0.00 0.00 1.90
255 256 4.284746 GCCAGGAGATACTAGCTGGTTAAT 59.715 45.833 8.46 0.00 34.70 1.40
256 257 3.641906 GCCAGGAGATACTAGCTGGTTAA 59.358 47.826 8.46 0.00 34.70 2.01
257 258 3.117093 AGCCAGGAGATACTAGCTGGTTA 60.117 47.826 8.46 0.00 34.70 2.85
258 259 2.043227 GCCAGGAGATACTAGCTGGTT 58.957 52.381 8.46 0.00 34.70 3.67
259 260 1.219213 AGCCAGGAGATACTAGCTGGT 59.781 52.381 8.18 8.18 34.70 4.00
260 261 1.617850 CAGCCAGGAGATACTAGCTGG 59.382 57.143 4.72 7.30 43.05 4.85
262 263 3.430453 GATCAGCCAGGAGATACTAGCT 58.570 50.000 0.00 0.00 0.00 3.32
263 264 2.495669 GGATCAGCCAGGAGATACTAGC 59.504 54.545 0.00 0.00 36.34 3.42
264 265 3.096092 GGGATCAGCCAGGAGATACTAG 58.904 54.545 0.00 0.00 38.95 2.57
265 266 2.555448 CGGGATCAGCCAGGAGATACTA 60.555 54.545 0.00 0.00 38.95 1.82
266 267 1.825242 CGGGATCAGCCAGGAGATACT 60.825 57.143 0.00 0.00 38.95 2.12
267 268 0.605589 CGGGATCAGCCAGGAGATAC 59.394 60.000 0.00 0.00 38.95 2.24
268 269 0.188587 ACGGGATCAGCCAGGAGATA 59.811 55.000 0.00 0.00 38.95 1.98
269 270 1.074926 ACGGGATCAGCCAGGAGAT 60.075 57.895 0.00 0.00 38.95 2.75
270 271 2.060383 CACGGGATCAGCCAGGAGA 61.060 63.158 0.00 0.00 38.95 3.71
271 272 2.503061 CACGGGATCAGCCAGGAG 59.497 66.667 0.00 0.00 38.95 3.69
272 273 3.785859 GCACGGGATCAGCCAGGA 61.786 66.667 0.00 0.00 38.95 3.86
273 274 4.100084 TGCACGGGATCAGCCAGG 62.100 66.667 0.00 0.00 38.95 4.45
274 275 1.960040 TACTGCACGGGATCAGCCAG 61.960 60.000 0.00 1.70 38.95 4.85
275 276 1.960040 CTACTGCACGGGATCAGCCA 61.960 60.000 0.00 0.00 38.95 4.75
276 277 1.227380 CTACTGCACGGGATCAGCC 60.227 63.158 0.00 0.00 33.80 4.85
277 278 0.807667 CACTACTGCACGGGATCAGC 60.808 60.000 0.00 0.00 33.80 4.26
278 279 0.807667 GCACTACTGCACGGGATCAG 60.808 60.000 0.00 0.00 43.62 2.90
279 280 1.218047 GCACTACTGCACGGGATCA 59.782 57.895 0.00 0.00 43.62 2.92
280 281 0.528684 GAGCACTACTGCACGGGATC 60.529 60.000 0.00 0.00 46.97 3.36
281 282 1.517832 GAGCACTACTGCACGGGAT 59.482 57.895 0.00 0.00 46.97 3.85
282 283 2.646175 GGAGCACTACTGCACGGGA 61.646 63.158 0.00 0.00 46.97 5.14
283 284 2.125512 GGAGCACTACTGCACGGG 60.126 66.667 0.00 0.00 46.97 5.28
284 285 1.446792 CAGGAGCACTACTGCACGG 60.447 63.158 0.00 0.00 46.97 4.94
285 286 0.734253 GACAGGAGCACTACTGCACG 60.734 60.000 9.89 0.00 45.43 5.34
286 287 0.605589 AGACAGGAGCACTACTGCAC 59.394 55.000 9.89 4.88 45.43 4.57
287 288 2.215942 TAGACAGGAGCACTACTGCA 57.784 50.000 9.89 0.00 45.43 4.41
288 289 3.594603 TTTAGACAGGAGCACTACTGC 57.405 47.619 9.89 3.34 45.43 4.40
289 290 7.548097 TCTTATTTTAGACAGGAGCACTACTG 58.452 38.462 8.39 8.39 46.90 2.74
290 291 7.719871 TCTTATTTTAGACAGGAGCACTACT 57.280 36.000 0.00 0.00 0.00 2.57
291 292 7.439655 CCATCTTATTTTAGACAGGAGCACTAC 59.560 40.741 0.00 0.00 0.00 2.73
292 293 7.500992 CCATCTTATTTTAGACAGGAGCACTA 58.499 38.462 0.00 0.00 0.00 2.74
293 294 6.352516 CCATCTTATTTTAGACAGGAGCACT 58.647 40.000 0.00 0.00 0.00 4.40
294 295 5.008118 GCCATCTTATTTTAGACAGGAGCAC 59.992 44.000 0.00 0.00 0.00 4.40
295 296 5.126067 GCCATCTTATTTTAGACAGGAGCA 58.874 41.667 0.00 0.00 0.00 4.26
296 297 4.212214 CGCCATCTTATTTTAGACAGGAGC 59.788 45.833 0.00 0.00 0.00 4.70
297 298 5.601662 TCGCCATCTTATTTTAGACAGGAG 58.398 41.667 0.00 0.00 0.00 3.69
298 299 5.601662 CTCGCCATCTTATTTTAGACAGGA 58.398 41.667 0.00 0.00 0.00 3.86
299 300 4.212214 GCTCGCCATCTTATTTTAGACAGG 59.788 45.833 0.00 0.00 0.00 4.00
300 301 4.811024 TGCTCGCCATCTTATTTTAGACAG 59.189 41.667 0.00 0.00 0.00 3.51
301 302 4.765273 TGCTCGCCATCTTATTTTAGACA 58.235 39.130 0.00 0.00 0.00 3.41
302 303 5.734855 TTGCTCGCCATCTTATTTTAGAC 57.265 39.130 0.00 0.00 0.00 2.59
303 304 5.880332 ACTTTGCTCGCCATCTTATTTTAGA 59.120 36.000 0.00 0.00 0.00 2.10
304 305 5.967674 CACTTTGCTCGCCATCTTATTTTAG 59.032 40.000 0.00 0.00 0.00 1.85
305 306 5.645929 TCACTTTGCTCGCCATCTTATTTTA 59.354 36.000 0.00 0.00 0.00 1.52
306 307 4.458989 TCACTTTGCTCGCCATCTTATTTT 59.541 37.500 0.00 0.00 0.00 1.82
307 308 4.009675 TCACTTTGCTCGCCATCTTATTT 58.990 39.130 0.00 0.00 0.00 1.40
308 309 3.609853 TCACTTTGCTCGCCATCTTATT 58.390 40.909 0.00 0.00 0.00 1.40
309 310 3.266510 TCACTTTGCTCGCCATCTTAT 57.733 42.857 0.00 0.00 0.00 1.73
310 311 2.760634 TCACTTTGCTCGCCATCTTA 57.239 45.000 0.00 0.00 0.00 2.10
311 312 1.896220 TTCACTTTGCTCGCCATCTT 58.104 45.000 0.00 0.00 0.00 2.40
312 313 1.808945 CTTTCACTTTGCTCGCCATCT 59.191 47.619 0.00 0.00 0.00 2.90
313 314 1.537202 ACTTTCACTTTGCTCGCCATC 59.463 47.619 0.00 0.00 0.00 3.51
314 315 1.609208 ACTTTCACTTTGCTCGCCAT 58.391 45.000 0.00 0.00 0.00 4.40
315 316 2.248280 TACTTTCACTTTGCTCGCCA 57.752 45.000 0.00 0.00 0.00 5.69
316 317 3.619233 TTTACTTTCACTTTGCTCGCC 57.381 42.857 0.00 0.00 0.00 5.54
317 318 3.422217 GCTTTTACTTTCACTTTGCTCGC 59.578 43.478 0.00 0.00 0.00 5.03
318 319 3.659444 CGCTTTTACTTTCACTTTGCTCG 59.341 43.478 0.00 0.00 0.00 5.03
319 320 3.975035 CCGCTTTTACTTTCACTTTGCTC 59.025 43.478 0.00 0.00 0.00 4.26
320 321 3.630312 TCCGCTTTTACTTTCACTTTGCT 59.370 39.130 0.00 0.00 0.00 3.91
321 322 3.959943 TCCGCTTTTACTTTCACTTTGC 58.040 40.909 0.00 0.00 0.00 3.68
322 323 5.757886 TGATCCGCTTTTACTTTCACTTTG 58.242 37.500 0.00 0.00 0.00 2.77
323 324 5.763204 TCTGATCCGCTTTTACTTTCACTTT 59.237 36.000 0.00 0.00 0.00 2.66
324 325 5.305585 TCTGATCCGCTTTTACTTTCACTT 58.694 37.500 0.00 0.00 0.00 3.16
325 326 4.894784 TCTGATCCGCTTTTACTTTCACT 58.105 39.130 0.00 0.00 0.00 3.41
326 327 5.383130 GTTCTGATCCGCTTTTACTTTCAC 58.617 41.667 0.00 0.00 0.00 3.18
327 328 4.151689 CGTTCTGATCCGCTTTTACTTTCA 59.848 41.667 0.00 0.00 0.00 2.69
340 341 3.253677 ACGGACATATCTCGTTCTGATCC 59.746 47.826 0.00 0.00 32.95 3.36
344 345 2.602456 CGGACGGACATATCTCGTTCTG 60.602 54.545 0.00 0.00 37.25 3.02
348 349 1.227639 CTCGGACGGACATATCTCGT 58.772 55.000 0.00 0.00 39.99 4.18
365 366 4.605967 CTCGCTCGCTCTCGCCTC 62.606 72.222 0.00 0.00 35.26 4.70
373 374 2.596046 ATCGATCCCTCGCTCGCT 60.596 61.111 0.00 0.00 44.65 4.93
374 375 2.126657 GATCGATCCCTCGCTCGC 60.127 66.667 14.76 0.00 44.65 5.03
379 380 0.936764 CAACAGCGATCGATCCCTCG 60.937 60.000 21.57 10.73 46.41 4.63
380 381 0.385751 TCAACAGCGATCGATCCCTC 59.614 55.000 21.57 9.04 0.00 4.30
381 382 0.103208 GTCAACAGCGATCGATCCCT 59.897 55.000 21.57 13.29 0.00 4.20
382 383 0.103208 AGTCAACAGCGATCGATCCC 59.897 55.000 21.57 10.98 0.00 3.85
383 384 2.776312 TAGTCAACAGCGATCGATCC 57.224 50.000 21.57 12.11 0.00 3.36
386 387 3.435566 GTCAATAGTCAACAGCGATCGA 58.564 45.455 21.57 0.00 0.00 3.59
409 410 2.766229 GAGAGGGGAGGAGGTGGC 60.766 72.222 0.00 0.00 0.00 5.01
416 417 4.444081 ACGGACGGAGAGGGGAGG 62.444 72.222 0.00 0.00 0.00 4.30
589 603 3.432051 CTCGTCTGATCCCACGGGC 62.432 68.421 12.23 0.00 36.64 6.13
599 613 2.736670 TCTCATCCCATCTCGTCTGA 57.263 50.000 0.00 0.00 0.00 3.27
600 614 2.889678 TCATCTCATCCCATCTCGTCTG 59.110 50.000 0.00 0.00 0.00 3.51
601 615 3.156293 CTCATCTCATCCCATCTCGTCT 58.844 50.000 0.00 0.00 0.00 4.18
602 616 3.153130 TCTCATCTCATCCCATCTCGTC 58.847 50.000 0.00 0.00 0.00 4.20
603 617 3.235750 TCTCATCTCATCCCATCTCGT 57.764 47.619 0.00 0.00 0.00 4.18
604 618 4.597404 TTTCTCATCTCATCCCATCTCG 57.403 45.455 0.00 0.00 0.00 4.04
605 619 5.939296 GGATTTTCTCATCTCATCCCATCTC 59.061 44.000 0.00 0.00 0.00 2.75
606 620 5.512749 CGGATTTTCTCATCTCATCCCATCT 60.513 44.000 0.00 0.00 31.19 2.90
607 621 4.694509 CGGATTTTCTCATCTCATCCCATC 59.305 45.833 0.00 0.00 31.19 3.51
608 622 4.649692 CGGATTTTCTCATCTCATCCCAT 58.350 43.478 0.00 0.00 31.19 4.00
609 623 3.745480 GCGGATTTTCTCATCTCATCCCA 60.745 47.826 0.00 0.00 31.19 4.37
610 624 2.810852 GCGGATTTTCTCATCTCATCCC 59.189 50.000 0.00 0.00 31.19 3.85
611 625 3.470709 TGCGGATTTTCTCATCTCATCC 58.529 45.455 0.00 0.00 0.00 3.51
612 626 3.497640 CCTGCGGATTTTCTCATCTCATC 59.502 47.826 0.00 0.00 0.00 2.92
613 627 3.474600 CCTGCGGATTTTCTCATCTCAT 58.525 45.455 0.00 0.00 0.00 2.90
654 668 2.125832 TGATTCGGTTCGTCGCCC 60.126 61.111 0.00 0.00 0.00 6.13
655 669 0.734942 TTCTGATTCGGTTCGTCGCC 60.735 55.000 0.00 0.00 0.00 5.54
656 670 0.365859 GTTCTGATTCGGTTCGTCGC 59.634 55.000 0.00 0.00 0.00 5.19
657 671 0.989890 GGTTCTGATTCGGTTCGTCG 59.010 55.000 0.00 0.00 0.00 5.12
658 672 0.989890 CGGTTCTGATTCGGTTCGTC 59.010 55.000 0.00 0.00 0.00 4.20
728 773 0.107268 TCCATGCATGAGTCCATCGG 59.893 55.000 28.31 7.93 0.00 4.18
735 780 0.179037 CCATCGGTCCATGCATGAGT 60.179 55.000 28.31 4.14 0.00 3.41
736 781 0.887836 CCCATCGGTCCATGCATGAG 60.888 60.000 28.31 17.31 0.00 2.90
737 782 1.148949 CCCATCGGTCCATGCATGA 59.851 57.895 28.31 11.26 0.00 3.07
738 783 2.558286 GCCCATCGGTCCATGCATG 61.558 63.158 20.19 20.19 0.00 4.06
790 835 2.319890 CTTATCCGAACCCCACCCGG 62.320 65.000 0.00 0.00 44.22 5.73
791 836 1.145377 CTTATCCGAACCCCACCCG 59.855 63.158 0.00 0.00 0.00 5.28
810 855 1.694525 CCCTTTCCCTCCTCCCTCC 60.695 68.421 0.00 0.00 0.00 4.30
811 856 0.983905 GTCCCTTTCCCTCCTCCCTC 60.984 65.000 0.00 0.00 0.00 4.30
812 857 1.083141 GTCCCTTTCCCTCCTCCCT 59.917 63.158 0.00 0.00 0.00 4.20
813 858 2.368011 CGTCCCTTTCCCTCCTCCC 61.368 68.421 0.00 0.00 0.00 4.30
814 859 2.368011 CCGTCCCTTTCCCTCCTCC 61.368 68.421 0.00 0.00 0.00 4.30
815 860 2.368011 CCCGTCCCTTTCCCTCCTC 61.368 68.421 0.00 0.00 0.00 3.71
816 861 2.285442 CCCGTCCCTTTCCCTCCT 60.285 66.667 0.00 0.00 0.00 3.69
908 971 2.272471 CGGGCCTCCTTTTCTCCC 59.728 66.667 0.84 0.00 0.00 4.30
909 972 2.138453 AACCGGGCCTCCTTTTCTCC 62.138 60.000 6.32 0.00 0.00 3.71
931 994 9.401873 GCGCCCGACTAAAAATAAATAAATAAT 57.598 29.630 0.00 0.00 0.00 1.28
942 1005 1.283736 CTACGCGCCCGACTAAAAAT 58.716 50.000 5.73 0.00 38.29 1.82
960 1037 5.808366 TCCTGGATTTTATGAGATACGCT 57.192 39.130 0.00 0.00 0.00 5.07
970 1047 6.204882 GGACGATCGAATTTCCTGGATTTTAT 59.795 38.462 24.34 0.00 0.00 1.40
1034 1130 3.966026 CTTCTCGGGCGTGGTCGTC 62.966 68.421 0.00 0.00 41.29 4.20
1035 1131 4.052229 CTTCTCGGGCGTGGTCGT 62.052 66.667 0.00 0.00 39.49 4.34
1095 1191 2.041405 GACAGAGGGAGGGGGAGG 60.041 72.222 0.00 0.00 0.00 4.30
1097 1193 1.547755 AGAGACAGAGGGAGGGGGA 60.548 63.158 0.00 0.00 0.00 4.81
1102 1198 1.209504 ACGAGAGAGAGACAGAGGGAG 59.790 57.143 0.00 0.00 0.00 4.30
1103 1199 1.208535 GACGAGAGAGAGACAGAGGGA 59.791 57.143 0.00 0.00 0.00 4.20
1106 1202 3.245518 TGAGACGAGAGAGAGACAGAG 57.754 52.381 0.00 0.00 0.00 3.35
1107 1203 3.431626 GGATGAGACGAGAGAGAGACAGA 60.432 52.174 0.00 0.00 0.00 3.41
1109 1205 2.503765 AGGATGAGACGAGAGAGAGACA 59.496 50.000 0.00 0.00 0.00 3.41
1110 1206 3.131396 GAGGATGAGACGAGAGAGAGAC 58.869 54.545 0.00 0.00 0.00 3.36
1111 1207 3.038280 AGAGGATGAGACGAGAGAGAGA 58.962 50.000 0.00 0.00 0.00 3.10
1112 1208 3.475566 AGAGGATGAGACGAGAGAGAG 57.524 52.381 0.00 0.00 0.00 3.20
1113 1209 3.540617 CAAGAGGATGAGACGAGAGAGA 58.459 50.000 0.00 0.00 0.00 3.10
1114 1210 2.033299 GCAAGAGGATGAGACGAGAGAG 59.967 54.545 0.00 0.00 0.00 3.20
1115 1211 2.020720 GCAAGAGGATGAGACGAGAGA 58.979 52.381 0.00 0.00 0.00 3.10
1117 1213 1.747924 CAGCAAGAGGATGAGACGAGA 59.252 52.381 0.00 0.00 33.82 4.04
1118 1214 1.802136 GCAGCAAGAGGATGAGACGAG 60.802 57.143 0.00 0.00 33.82 4.18
1119 1215 0.174389 GCAGCAAGAGGATGAGACGA 59.826 55.000 0.00 0.00 33.82 4.20
1120 1216 0.175302 AGCAGCAAGAGGATGAGACG 59.825 55.000 0.00 0.00 33.82 4.18
1143 1262 2.061220 CACTCCAACCCTCAGCTCA 58.939 57.895 0.00 0.00 0.00 4.26
1144 1263 1.376553 GCACTCCAACCCTCAGCTC 60.377 63.158 0.00 0.00 0.00 4.09
1145 1264 2.753029 GCACTCCAACCCTCAGCT 59.247 61.111 0.00 0.00 0.00 4.24
1146 1265 2.743928 CGCACTCCAACCCTCAGC 60.744 66.667 0.00 0.00 0.00 4.26
1147 1266 2.046892 CCGCACTCCAACCCTCAG 60.047 66.667 0.00 0.00 0.00 3.35
1148 1267 4.329545 GCCGCACTCCAACCCTCA 62.330 66.667 0.00 0.00 0.00 3.86
1153 1272 4.465512 CATGCGCCGCACTCCAAC 62.466 66.667 16.70 0.00 43.04 3.77
1157 1276 3.857854 CTCACATGCGCCGCACTC 61.858 66.667 16.70 0.00 43.04 3.51
1162 1281 3.561213 CTCAGCTCACATGCGCCG 61.561 66.667 4.18 0.00 38.13 6.46
1163 1282 3.873883 GCTCAGCTCACATGCGCC 61.874 66.667 4.18 0.00 38.13 6.53
1259 1378 0.985490 CTCCTTCTCCCCCTTCCCTG 60.985 65.000 0.00 0.00 0.00 4.45
1260 1379 1.398234 CTCCTTCTCCCCCTTCCCT 59.602 63.158 0.00 0.00 0.00 4.20
1261 1380 1.694525 CCTCCTTCTCCCCCTTCCC 60.695 68.421 0.00 0.00 0.00 3.97
1262 1381 0.253207 TTCCTCCTTCTCCCCCTTCC 60.253 60.000 0.00 0.00 0.00 3.46
1263 1382 1.208706 CTTCCTCCTTCTCCCCCTTC 58.791 60.000 0.00 0.00 0.00 3.46
1264 1383 0.253394 CCTTCCTCCTTCTCCCCCTT 60.253 60.000 0.00 0.00 0.00 3.95
1273 1392 1.162951 TCCTCCTCCCCTTCCTCCTT 61.163 60.000 0.00 0.00 0.00 3.36
1281 1400 2.018086 CTCCTCCTCCTCCTCCCCT 61.018 68.421 0.00 0.00 0.00 4.79
1283 1402 2.612251 CCTCCTCCTCCTCCTCCC 59.388 72.222 0.00 0.00 0.00 4.30
1575 1694 3.995809 GATGGAGGGTGGTCGGGGA 62.996 68.421 0.00 0.00 0.00 4.81
1579 1698 1.050988 ATGGAGATGGAGGGTGGTCG 61.051 60.000 0.00 0.00 0.00 4.79
1580 1699 0.471617 CATGGAGATGGAGGGTGGTC 59.528 60.000 0.00 0.00 0.00 4.02
1581 1700 0.253347 ACATGGAGATGGAGGGTGGT 60.253 55.000 0.00 0.00 33.39 4.16
1584 1703 0.914644 CACACATGGAGATGGAGGGT 59.085 55.000 0.00 0.00 33.39 4.34
1612 1757 0.179215 CAATTGCTGAAGCCGTCGTC 60.179 55.000 0.00 0.00 41.18 4.20
1632 1777 1.287503 GGAGCCGAGGAAGCGATAG 59.712 63.158 0.00 0.00 34.64 2.08
1639 1784 2.922503 TGCAGTGGAGCCGAGGAA 60.923 61.111 0.00 0.00 0.00 3.36
1659 1804 4.581648 GAGAATTCGCGCGGCAGC 62.582 66.667 31.69 17.09 40.74 5.25
1697 1842 1.479730 TCAGAGGCAGAGCATGTACTG 59.520 52.381 13.99 13.99 37.22 2.74
1698 1843 1.480137 GTCAGAGGCAGAGCATGTACT 59.520 52.381 0.00 0.00 0.00 2.73
1700 1845 0.826715 GGTCAGAGGCAGAGCATGTA 59.173 55.000 0.00 0.00 33.87 2.29
1702 1847 1.600638 TGGTCAGAGGCAGAGCATG 59.399 57.895 3.01 0.00 38.45 4.06
1705 1850 1.818785 GCATGGTCAGAGGCAGAGC 60.819 63.158 0.00 0.00 0.00 4.09
1706 1851 1.600638 TGCATGGTCAGAGGCAGAG 59.399 57.895 0.00 0.00 0.00 3.35
1707 1852 3.810255 TGCATGGTCAGAGGCAGA 58.190 55.556 0.00 0.00 0.00 4.26
1708 1853 4.220413 CTGCATGGTCAGAGGCAG 57.780 61.111 0.00 0.00 46.47 4.85
1709 1854 2.045634 GCTGCATGGTCAGAGGCA 60.046 61.111 4.68 0.00 36.19 4.75
1710 1855 2.045634 TGCTGCATGGTCAGAGGC 60.046 61.111 0.00 0.00 36.19 4.70
1711 1856 0.538584 TACTGCTGCATGGTCAGAGG 59.461 55.000 1.31 0.00 36.19 3.69
1712 1857 1.066645 TGTACTGCTGCATGGTCAGAG 60.067 52.381 1.31 0.00 36.19 3.35
1713 1858 0.975887 TGTACTGCTGCATGGTCAGA 59.024 50.000 1.31 0.00 36.19 3.27
1714 1859 1.669265 CATGTACTGCTGCATGGTCAG 59.331 52.381 1.31 0.00 38.90 3.51
1796 2052 3.515286 CTTCCATGGCAGGCGCAG 61.515 66.667 10.83 1.27 41.24 5.18
1798 2054 4.802051 TCCTTCCATGGCAGGCGC 62.802 66.667 24.40 0.00 37.44 6.53
1799 2055 2.825836 GTCCTTCCATGGCAGGCG 60.826 66.667 24.40 3.47 0.00 5.52
1800 2056 1.076485 ATGTCCTTCCATGGCAGGC 60.076 57.895 24.40 18.94 0.00 4.85
1830 2090 3.433274 GGTTGTGGTAAAACGGTACTAGC 59.567 47.826 0.00 0.00 0.00 3.42
1832 2092 4.100808 ACAGGTTGTGGTAAAACGGTACTA 59.899 41.667 0.00 0.00 0.00 1.82
1833 2093 3.118298 ACAGGTTGTGGTAAAACGGTACT 60.118 43.478 0.00 0.00 0.00 2.73
1834 2094 3.205338 ACAGGTTGTGGTAAAACGGTAC 58.795 45.455 0.00 0.00 0.00 3.34
1869 2129 4.141482 ACAGGAGCTTCTTTTTGTGTAGGA 60.141 41.667 0.00 0.00 0.00 2.94
1899 2166 8.344098 GGCTGTCAATCAAATTCAATTTCAAAA 58.656 29.630 0.00 0.00 0.00 2.44
1906 2173 3.514645 GCGGCTGTCAATCAAATTCAAT 58.485 40.909 0.00 0.00 0.00 2.57
1911 2178 1.802636 CCGCGGCTGTCAATCAAAT 59.197 52.632 14.67 0.00 0.00 2.32
1912 2179 2.976840 GCCGCGGCTGTCAATCAAA 61.977 57.895 41.71 0.00 38.26 2.69
1913 2180 3.430862 GCCGCGGCTGTCAATCAA 61.431 61.111 41.71 0.00 38.26 2.57
1931 2198 6.397272 CATTAATTTAAAGCCAGAGCAACCA 58.603 36.000 0.00 0.00 43.56 3.67
2139 2409 3.807538 GGCGCGTACTCGTCCTGA 61.808 66.667 8.43 0.00 39.49 3.86
2290 2571 4.463879 CCGGTCCTCCTGCAGCAG 62.464 72.222 16.23 16.23 0.00 4.24
2391 2681 1.203025 AGGTAGACAGGGAACGTCAGT 60.203 52.381 0.00 0.00 36.68 3.41
2492 2782 4.774726 AGTAGAACAGAGGAGAGAAATGCA 59.225 41.667 0.00 0.00 0.00 3.96
2493 2783 5.337578 AGTAGAACAGAGGAGAGAAATGC 57.662 43.478 0.00 0.00 0.00 3.56
2494 2784 7.201785 GGAGTAGTAGAACAGAGGAGAGAAATG 60.202 44.444 0.00 0.00 0.00 2.32
2495 2785 6.831868 GGAGTAGTAGAACAGAGGAGAGAAAT 59.168 42.308 0.00 0.00 0.00 2.17
2496 2786 6.181908 GGAGTAGTAGAACAGAGGAGAGAAA 58.818 44.000 0.00 0.00 0.00 2.52
2499 2789 4.879545 GTGGAGTAGTAGAACAGAGGAGAG 59.120 50.000 0.00 0.00 0.00 3.20
2504 2794 6.408035 TCTACAGTGGAGTAGTAGAACAGAG 58.592 44.000 1.29 0.00 40.72 3.35
2612 2941 7.700656 ACAGTGAAGTAAAAGTGTAAAACATGC 59.299 33.333 0.00 0.00 0.00 4.06
2628 2957 9.996554 TCTTTCATTTTCTGATACAGTGAAGTA 57.003 29.630 0.00 0.00 32.72 2.24
2629 2958 8.908786 TCTTTCATTTTCTGATACAGTGAAGT 57.091 30.769 0.00 0.00 32.72 3.01
2630 2959 9.823098 CTTCTTTCATTTTCTGATACAGTGAAG 57.177 33.333 0.00 0.00 32.72 3.02
2694 3023 3.264104 CCCATTTTGACCAATGATGTGC 58.736 45.455 0.00 0.00 36.39 4.57
2697 3026 5.410355 AAGACCCATTTTGACCAATGATG 57.590 39.130 0.00 0.00 36.39 3.07
2698 3027 6.438186 AAAAGACCCATTTTGACCAATGAT 57.562 33.333 0.00 0.00 36.39 2.45
2705 3034 8.406297 GGTCAGATATAAAAGACCCATTTTGAC 58.594 37.037 8.79 0.00 43.67 3.18
2715 3044 7.851472 GCGCTAAAAAGGTCAGATATAAAAGAC 59.149 37.037 0.00 0.00 0.00 3.01
2739 3068 1.202417 TCGGAGCATTCTAAGAAGGCG 60.202 52.381 0.00 0.00 0.00 5.52
2752 3081 1.378882 GCTTGATGCCAATCGGAGCA 61.379 55.000 8.26 0.00 41.07 4.26
2816 3147 3.673338 GCGCTTTCAAGTTCCAAATAACC 59.327 43.478 0.00 0.00 0.00 2.85
2837 3168 4.911514 TTTGTTACACCTGAAAAGAGGC 57.088 40.909 0.00 0.00 36.46 4.70
2846 3177 6.560253 AGCAAGACTATTTTGTTACACCTG 57.440 37.500 0.00 0.00 0.00 4.00
2901 3233 3.342627 CTGCGCCGAACCGTCAAA 61.343 61.111 4.18 0.00 0.00 2.69
2925 3257 0.920664 GTTCAGTTTGCGGTTGTTGC 59.079 50.000 0.00 0.00 0.00 4.17
2950 3284 7.394077 TCCAAGATATCTGTCAAGCAAAATCAA 59.606 33.333 5.86 0.00 0.00 2.57
2970 3306 0.740868 CATCGAAAGCGCCTCCAAGA 60.741 55.000 2.29 0.00 37.46 3.02
3075 3411 5.041191 ACCCATACATGACAAGAGGATTC 57.959 43.478 0.00 0.00 0.00 2.52
3324 3661 6.237755 GCATAAGTATAACGAACACACCAGAC 60.238 42.308 0.00 0.00 0.00 3.51
3333 3670 6.585322 AGCCGATAAGCATAAGTATAACGAAC 59.415 38.462 0.00 0.00 34.23 3.95
3485 3822 9.979578 AATCTTAGAATATCTCAACAGCTAGTG 57.020 33.333 0.00 0.00 0.00 2.74
3639 3976 6.211587 TGGAAGAAAGGAATTACATGCATG 57.788 37.500 25.09 25.09 0.00 4.06
3640 3977 6.855763 TTGGAAGAAAGGAATTACATGCAT 57.144 33.333 0.00 0.00 0.00 3.96
3641 3978 6.271488 CTTGGAAGAAAGGAATTACATGCA 57.729 37.500 0.00 0.00 0.00 3.96
3780 4117 8.157476 ACTTCGTTAATTAGGGATATCAATGCT 58.843 33.333 4.83 0.00 0.00 3.79
3967 4304 2.699073 ATGCATTAGCGTGGCTGAG 58.301 52.632 0.00 0.00 46.23 3.35
3975 4312 5.634859 TGTACAGTATGATCATGCATTAGCG 59.365 40.000 23.43 8.58 41.48 4.26
4026 4363 6.599437 TGCAGAGTATTTTAAGAAAGCGAAC 58.401 36.000 0.00 0.00 0.00 3.95
4281 4620 3.053831 AGTAAACCCAGTTGTCCGATG 57.946 47.619 0.00 0.00 0.00 3.84
4321 4660 7.434897 CACAGCAAACAACAATACAATGTAAGT 59.565 33.333 0.00 0.00 32.02 2.24
4643 4982 7.402071 TGAATTGGTATACCTATCCCTGTATCC 59.598 40.741 22.41 4.02 36.82 2.59
4727 5066 2.024464 CCCAATTCCAGTCCCACCATAA 60.024 50.000 0.00 0.00 0.00 1.90
4748 5087 6.246420 ACAAGACATTTGCTGATACTCAAC 57.754 37.500 0.00 0.00 0.00 3.18
5084 5423 7.549134 CAGGAAGCACTTATGATGTAAGTTGTA 59.451 37.037 0.00 0.00 35.76 2.41
5232 7199 3.931907 TTGCCTACAGCCACTATCAAT 57.068 42.857 0.00 0.00 42.71 2.57
5354 7321 6.135290 TGAACAGAAGAACCAAACTTCATG 57.865 37.500 0.00 0.00 44.01 3.07
5364 7331 9.750125 AAATTTTAAGTCATGAACAGAAGAACC 57.250 29.630 0.00 0.00 0.00 3.62
5405 7372 9.278978 GTTTCTCTTTCTGAAAATAAGGAGTCT 57.721 33.333 12.97 0.00 35.54 3.24
5515 7482 9.308000 ACATTAAGTTCAATGGGATAAAACTGA 57.692 29.630 1.36 0.00 39.71 3.41
5803 7770 2.100749 TGCCTGTGTGATACTGATACCG 59.899 50.000 0.00 0.00 0.00 4.02
6007 7974 6.971184 CCATTAGACAGAGATCAAATTTGTGC 59.029 38.462 17.47 10.74 0.00 4.57
6137 8105 2.607635 GTGCTTGTACATGGTATGTCGG 59.392 50.000 10.47 0.00 43.67 4.79
6143 8111 4.646572 TGTGATTGTGCTTGTACATGGTA 58.353 39.130 10.47 0.00 0.00 3.25
6408 8394 8.517878 AGCTTTGGTATTATAATCATCACATGC 58.482 33.333 0.00 4.25 0.00 4.06
6451 8437 2.265589 AAACCTACAAGGAACCACCG 57.734 50.000 0.00 0.00 44.74 4.94
6467 8453 5.519927 GCCATGGCTACACAAATATGAAAAC 59.480 40.000 29.98 0.00 38.26 2.43
6470 8456 3.636300 GGCCATGGCTACACAAATATGAA 59.364 43.478 34.70 0.00 41.60 2.57
6509 8495 7.545965 ACTGGTTACAAAAGAGATATTGACTCG 59.454 37.037 0.00 0.00 39.12 4.18
6525 8511 7.909518 ACCAATATGTACTGTACTGGTTACAA 58.090 34.615 18.58 0.00 40.33 2.41
6558 8567 8.204836 GTGGTATATTGACTCAGGTACAAAGAT 58.795 37.037 0.00 0.00 0.00 2.40
6590 8599 5.107220 ACGTGTATTCCTTTAAACAGAAGCG 60.107 40.000 0.00 0.00 0.00 4.68
6679 8688 7.092137 TGAATTATCAGCATTGTCTTTCTGG 57.908 36.000 0.00 0.00 0.00 3.86
6769 8778 0.179026 CCTCATGAGTGGCCTGGATG 60.179 60.000 21.11 1.11 0.00 3.51
6897 8906 3.640000 CACCGGAATGCGCGGATC 61.640 66.667 15.23 7.53 33.71 3.36
6924 8933 3.844090 GTCAGAGCTCCTCCCGGC 61.844 72.222 10.93 0.00 0.00 6.13
6926 8935 0.967887 TTCAGTCAGAGCTCCTCCCG 60.968 60.000 10.93 0.00 0.00 5.14
6932 8941 0.172352 CCTCCGTTCAGTCAGAGCTC 59.828 60.000 5.27 5.27 0.00 4.09
6934 8943 1.446966 GCCTCCGTTCAGTCAGAGC 60.447 63.158 0.00 0.00 0.00 4.09
6979 8988 1.303309 GGAACCAGAATGCATCCTCG 58.697 55.000 0.00 0.00 36.67 4.63
7080 9089 5.049405 GCCAATACAATACATGTACAGCTCC 60.049 44.000 7.96 0.00 46.90 4.70
7127 9136 4.039245 CCTTCGGCATATGTTTCTCCTAGA 59.961 45.833 4.29 0.00 0.00 2.43
7168 9177 1.800586 CGAACAGTACACATGCTGCTT 59.199 47.619 0.00 0.00 41.96 3.91
7169 9178 1.432514 CGAACAGTACACATGCTGCT 58.567 50.000 0.00 0.00 41.96 4.24
7170 9179 0.179215 GCGAACAGTACACATGCTGC 60.179 55.000 0.00 0.00 41.96 5.25
7171 9180 0.093535 CGCGAACAGTACACATGCTG 59.906 55.000 0.00 0.00 43.70 4.41
7172 9181 0.319555 ACGCGAACAGTACACATGCT 60.320 50.000 15.93 0.00 0.00 3.79
7173 9182 0.093026 GACGCGAACAGTACACATGC 59.907 55.000 15.93 0.00 0.00 4.06
7174 9183 0.362179 CGACGCGAACAGTACACATG 59.638 55.000 15.93 0.00 0.00 3.21
7175 9184 0.239082 TCGACGCGAACAGTACACAT 59.761 50.000 15.93 0.00 31.06 3.21
7176 9185 0.239082 ATCGACGCGAACAGTACACA 59.761 50.000 15.93 0.00 39.99 3.72
7186 9211 1.727335 CTATGCTCTAGATCGACGCGA 59.273 52.381 15.93 4.51 41.13 5.87
7277 9322 9.381027 GAGCAAATAAAACAGCCAAAAATTAAC 57.619 29.630 0.00 0.00 0.00 2.01
7317 9362 2.930040 CAGCTTAACACACATACCGGAG 59.070 50.000 9.46 0.00 0.00 4.63
7318 9363 2.563620 TCAGCTTAACACACATACCGGA 59.436 45.455 9.46 0.00 0.00 5.14
7365 9412 4.617253 TTCCTCCCAATACATATCCACG 57.383 45.455 0.00 0.00 0.00 4.94
7401 9448 1.203001 TCCCTCCCAACACATTTCCAC 60.203 52.381 0.00 0.00 0.00 4.02
7466 9514 9.494271 CAGAAAGGAAGGATTATAATCGATTCA 57.506 33.333 26.80 0.66 35.33 2.57
7467 9515 9.495572 ACAGAAAGGAAGGATTATAATCGATTC 57.504 33.333 15.25 22.15 36.27 2.52
7468 9516 9.853177 AACAGAAAGGAAGGATTATAATCGATT 57.147 29.630 16.15 16.15 36.27 3.34
7469 9517 9.495572 GAACAGAAAGGAAGGATTATAATCGAT 57.504 33.333 17.25 9.70 36.27 3.59
7470 9518 7.652105 CGAACAGAAAGGAAGGATTATAATCGA 59.348 37.037 17.25 0.00 36.27 3.59
7471 9519 7.652105 TCGAACAGAAAGGAAGGATTATAATCG 59.348 37.037 17.25 4.01 36.27 3.34
7472 9520 8.888579 TCGAACAGAAAGGAAGGATTATAATC 57.111 34.615 15.88 15.88 34.66 1.75
7473 9521 8.487028 ACTCGAACAGAAAGGAAGGATTATAAT 58.513 33.333 0.00 0.00 0.00 1.28
7474 9522 7.848128 ACTCGAACAGAAAGGAAGGATTATAA 58.152 34.615 0.00 0.00 0.00 0.98
7475 9523 7.419711 ACTCGAACAGAAAGGAAGGATTATA 57.580 36.000 0.00 0.00 0.00 0.98
7476 9524 6.301169 ACTCGAACAGAAAGGAAGGATTAT 57.699 37.500 0.00 0.00 0.00 1.28
7477 9525 5.740290 ACTCGAACAGAAAGGAAGGATTA 57.260 39.130 0.00 0.00 0.00 1.75
7478 9526 4.625607 ACTCGAACAGAAAGGAAGGATT 57.374 40.909 0.00 0.00 0.00 3.01
7479 9527 5.480205 GTTACTCGAACAGAAAGGAAGGAT 58.520 41.667 0.00 0.00 38.02 3.24
7480 9528 4.558095 CGTTACTCGAACAGAAAGGAAGGA 60.558 45.833 0.00 0.00 42.86 3.36
7524 9572 2.554893 GGGTTTGCAAACGGATACTTCA 59.445 45.455 30.40 0.00 39.77 3.02
7525 9573 2.817844 AGGGTTTGCAAACGGATACTTC 59.182 45.455 30.40 16.72 39.77 3.01
7593 9645 2.559440 CCAGTGAATTCTAGCTCCTGC 58.441 52.381 7.05 0.00 40.05 4.85
7594 9646 2.170187 AGCCAGTGAATTCTAGCTCCTG 59.830 50.000 7.05 3.56 27.04 3.86
7656 9708 0.826715 ATTCCAAGCTCGCTCTAGCA 59.173 50.000 2.44 0.00 45.30 3.49
7687 9739 2.915349 TGCTCATCTCCTTTCAGCATC 58.085 47.619 0.00 0.00 35.17 3.91
7737 9789 2.598565 TGCAGAGTAGAGTGGTTCAGT 58.401 47.619 0.00 0.00 0.00 3.41
7738 9790 3.883830 ATGCAGAGTAGAGTGGTTCAG 57.116 47.619 0.00 0.00 0.00 3.02
7739 9791 4.563580 GGAAATGCAGAGTAGAGTGGTTCA 60.564 45.833 0.00 0.00 0.00 3.18
7740 9792 3.935828 GGAAATGCAGAGTAGAGTGGTTC 59.064 47.826 0.00 0.00 0.00 3.62
7971 11249 8.761689 ACTAATTGTGCCCATGATATTTCTTTT 58.238 29.630 0.00 0.00 0.00 2.27
8037 11316 3.713003 TCTCCTGATCTTGTAGGCTTGA 58.287 45.455 0.00 0.00 34.00 3.02
8214 11495 1.514657 CATGCACGGCACAATTCGG 60.515 57.895 0.50 0.00 43.04 4.30
8249 11530 6.484364 TCAGAAGATACAACTATCATGCCA 57.516 37.500 0.00 0.00 32.36 4.92
8251 11532 9.661187 CAATTTCAGAAGATACAACTATCATGC 57.339 33.333 0.00 0.00 32.36 4.06
8252 11533 9.661187 GCAATTTCAGAAGATACAACTATCATG 57.339 33.333 0.00 0.00 32.36 3.07
8253 11534 8.844244 GGCAATTTCAGAAGATACAACTATCAT 58.156 33.333 0.00 0.00 32.36 2.45
8254 11535 7.283127 GGGCAATTTCAGAAGATACAACTATCA 59.717 37.037 0.00 0.00 32.36 2.15
8255 11536 7.283127 TGGGCAATTTCAGAAGATACAACTATC 59.717 37.037 0.00 0.00 0.00 2.08
8257 11538 6.374333 GTGGGCAATTTCAGAAGATACAACTA 59.626 38.462 0.00 0.00 0.00 2.24


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.