Multiple sequence alignment - TraesCS4B01G048900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G048900 chr4B 100.000 3005 0 0 1 3005 37175463 37172459 0.000000e+00 5550.0
1 TraesCS4B01G048900 chr4B 90.628 1035 87 6 983 2008 37297448 37296415 0.000000e+00 1365.0
2 TraesCS4B01G048900 chr4B 86.857 175 5 5 2540 2714 270874130 270873974 2.380000e-41 180.0
3 TraesCS4B01G048900 chr4B 91.111 45 3 1 37 80 546674057 546674101 3.240000e-05 60.2
4 TraesCS4B01G048900 chr4D 92.926 1654 88 4 588 2230 25194913 25193278 0.000000e+00 2379.0
5 TraesCS4B01G048900 chr4D 89.372 1035 100 6 983 2008 25364013 25362980 0.000000e+00 1293.0
6 TraesCS4B01G048900 chr4D 85.714 1036 126 10 983 2008 25321271 25320248 0.000000e+00 1074.0
7 TraesCS4B01G048900 chr4D 77.817 852 157 24 1134 1976 25159691 25160519 5.790000e-137 497.0
8 TraesCS4B01G048900 chr4D 95.082 61 3 0 82 142 441058891 441058951 2.470000e-16 97.1
9 TraesCS4B01G048900 chr4D 91.111 45 3 1 37 80 441058511 441058555 3.240000e-05 60.2
10 TraesCS4B01G048900 chr4A 91.606 1656 117 12 585 2230 578233162 578234805 0.000000e+00 2268.0
11 TraesCS4B01G048900 chr4A 89.768 1036 95 7 983 2008 578176207 578175173 0.000000e+00 1315.0
12 TraesCS4B01G048900 chr4A 87.864 1030 114 7 983 2002 578006996 578008024 0.000000e+00 1199.0
13 TraesCS4B01G048900 chr4A 92.500 120 9 0 2597 2716 740772871 740772990 3.980000e-39 172.0
14 TraesCS4B01G048900 chr3B 89.469 1035 99 7 983 2008 39545166 39546199 0.000000e+00 1299.0
15 TraesCS4B01G048900 chr3B 96.928 293 6 1 2716 3005 84579855 84579563 3.480000e-134 488.0
16 TraesCS4B01G048900 chr3B 88.757 338 25 5 14 351 96067608 96067284 4.670000e-108 401.0
17 TraesCS4B01G048900 chr1B 96.928 293 5 2 2716 3005 416058679 416058970 3.480000e-134 488.0
18 TraesCS4B01G048900 chr1B 96.246 293 8 1 2716 3005 86770232 86770524 7.540000e-131 477.0
19 TraesCS4B01G048900 chr1B 94.944 178 9 0 2539 2716 688280443 688280266 2.280000e-71 279.0
20 TraesCS4B01G048900 chr6B 96.918 292 5 2 2717 3005 60186289 60185999 1.250000e-133 486.0
21 TraesCS4B01G048900 chr6B 96.587 293 7 1 2716 3005 705336737 705336445 1.620000e-132 483.0
22 TraesCS4B01G048900 chr6B 91.223 319 22 6 2228 2541 22518643 22518960 2.140000e-116 429.0
23 TraesCS4B01G048900 chr6B 88.172 93 8 2 99 188 141661142 141661234 1.140000e-19 108.0
24 TraesCS4B01G048900 chr6B 100.000 29 0 0 535 563 84925110 84925138 2.000000e-03 54.7
25 TraesCS4B01G048900 chr7B 96.587 293 7 1 2716 3005 667253327 667253619 1.620000e-132 483.0
26 TraesCS4B01G048900 chr7B 96.246 293 8 1 2716 3005 648191600 648191892 7.540000e-131 477.0
27 TraesCS4B01G048900 chr2B 96.246 293 8 1 2716 3005 383283899 383283607 7.540000e-131 477.0
28 TraesCS4B01G048900 chr2B 89.326 178 19 0 2539 2716 550127349 550127172 1.080000e-54 224.0
29 TraesCS4B01G048900 chr2B 89.888 178 9 6 2539 2716 550643803 550643635 1.400000e-53 220.0
30 TraesCS4B01G048900 chr2B 86.441 177 6 4 2540 2716 769062576 769062418 8.560000e-41 178.0
31 TraesCS4B01G048900 chr5B 96.233 292 8 1 2717 3005 658103121 658103412 2.710000e-130 475.0
32 TraesCS4B01G048900 chr5B 89.888 178 6 5 2539 2716 82038186 82038351 5.040000e-53 219.0
33 TraesCS4B01G048900 chr6D 92.994 314 16 3 2228 2535 407822924 407822611 1.270000e-123 453.0
34 TraesCS4B01G048900 chr5A 92.283 311 18 4 2224 2530 69981428 69981736 1.280000e-118 436.0
35 TraesCS4B01G048900 chr5A 90.794 315 21 6 2232 2541 616718249 616717938 5.990000e-112 414.0
36 TraesCS4B01G048900 chr5A 88.764 178 8 5 2539 2716 125830297 125830462 1.090000e-49 207.0
37 TraesCS4B01G048900 chr2D 92.089 316 16 7 2232 2541 174334046 174333734 1.280000e-118 436.0
38 TraesCS4B01G048900 chr2D 93.304 224 8 2 345 561 453547522 453547299 1.040000e-84 324.0
39 TraesCS4B01G048900 chr2D 90.625 224 10 6 345 561 577074133 577073914 1.360000e-73 287.0
40 TraesCS4B01G048900 chr2D 88.128 219 23 3 345 563 8147934 8147719 1.070000e-64 257.0
41 TraesCS4B01G048900 chr2D 95.181 83 4 0 269 351 453547628 453547546 6.760000e-27 132.0
42 TraesCS4B01G048900 chr2D 91.566 83 7 0 269 351 577074239 577074157 6.810000e-22 115.0
43 TraesCS4B01G048900 chr1A 91.346 312 18 6 2227 2532 594038628 594038320 4.630000e-113 418.0
44 TraesCS4B01G048900 chr1D 90.123 324 19 10 2228 2541 346873401 346873081 2.790000e-110 409.0
45 TraesCS4B01G048900 chr1D 92.166 217 11 5 345 561 237416168 237415958 4.870000e-78 302.0
46 TraesCS4B01G048900 chr1D 94.958 119 6 0 2598 2716 486376771 486376653 1.420000e-43 187.0
47 TraesCS4B01G048900 chr1D 95.000 80 4 0 269 348 237416274 237416195 3.140000e-25 126.0
48 TraesCS4B01G048900 chr1D 98.246 57 1 0 2540 2596 486376811 486376755 1.910000e-17 100.0
49 TraesCS4B01G048900 chr1D 93.878 49 1 2 412 459 487718403 487718450 4.160000e-09 73.1
50 TraesCS4B01G048900 chr5D 89.752 322 23 7 2228 2541 321715406 321715725 1.300000e-108 403.0
51 TraesCS4B01G048900 chr5D 92.377 223 10 2 345 561 387603041 387602820 8.090000e-81 311.0
52 TraesCS4B01G048900 chr5D 95.181 83 4 0 269 351 387611848 387611766 6.760000e-27 132.0
53 TraesCS4B01G048900 chr7A 89.720 321 23 7 2226 2541 210597296 210597611 4.670000e-108 401.0
54 TraesCS4B01G048900 chr7A 88.764 178 20 0 2539 2716 210598195 210598372 5.040000e-53 219.0
55 TraesCS4B01G048900 chr7A 97.333 75 2 0 2642 2716 699569084 699569158 8.740000e-26 128.0
56 TraesCS4B01G048900 chr7D 91.031 223 9 4 345 561 472086483 472086266 1.050000e-74 291.0
57 TraesCS4B01G048900 chr7D 85.380 171 18 5 88 252 579054973 579055142 1.430000e-38 171.0
58 TraesCS4B01G048900 chr7D 95.181 83 4 0 269 351 472086589 472086507 6.760000e-27 132.0
59 TraesCS4B01G048900 chr3D 90.323 217 14 6 345 561 14127468 14127259 8.200000e-71 278.0
60 TraesCS4B01G048900 chr3D 88.128 219 21 4 345 563 387312061 387311848 3.840000e-64 255.0
61 TraesCS4B01G048900 chr3D 83.761 117 9 5 75 188 468740724 468740615 5.300000e-18 102.0
62 TraesCS4B01G048900 chr2A 90.449 178 5 5 2539 2716 712541121 712540956 1.080000e-54 224.0
63 TraesCS4B01G048900 chr2A 85.377 212 24 4 47 252 553282120 553281910 2.350000e-51 213.0
64 TraesCS4B01G048900 chr6A 94.118 119 7 0 2598 2716 27043465 27043347 6.620000e-42 182.0
65 TraesCS4B01G048900 chrUn 92.437 119 9 0 2598 2716 348689399 348689517 1.430000e-38 171.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G048900 chr4B 37172459 37175463 3004 True 5550 5550 100.000 1 3005 1 chr4B.!!$R1 3004
1 TraesCS4B01G048900 chr4B 37296415 37297448 1033 True 1365 1365 90.628 983 2008 1 chr4B.!!$R2 1025
2 TraesCS4B01G048900 chr4D 25193278 25194913 1635 True 2379 2379 92.926 588 2230 1 chr4D.!!$R1 1642
3 TraesCS4B01G048900 chr4D 25362980 25364013 1033 True 1293 1293 89.372 983 2008 1 chr4D.!!$R3 1025
4 TraesCS4B01G048900 chr4D 25320248 25321271 1023 True 1074 1074 85.714 983 2008 1 chr4D.!!$R2 1025
5 TraesCS4B01G048900 chr4D 25159691 25160519 828 False 497 497 77.817 1134 1976 1 chr4D.!!$F1 842
6 TraesCS4B01G048900 chr4A 578233162 578234805 1643 False 2268 2268 91.606 585 2230 1 chr4A.!!$F2 1645
7 TraesCS4B01G048900 chr4A 578175173 578176207 1034 True 1315 1315 89.768 983 2008 1 chr4A.!!$R1 1025
8 TraesCS4B01G048900 chr4A 578006996 578008024 1028 False 1199 1199 87.864 983 2002 1 chr4A.!!$F1 1019
9 TraesCS4B01G048900 chr3B 39545166 39546199 1033 False 1299 1299 89.469 983 2008 1 chr3B.!!$F1 1025
10 TraesCS4B01G048900 chr7A 210597296 210598372 1076 False 310 401 89.242 2226 2716 2 chr7A.!!$F2 490

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
499 500 0.036388 AGTGGATAAGTGCGTGGGTG 60.036 55.0 0.0 0.0 0.0 4.61 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2178 2219 0.175073 GACGTTCCCTGGTTAGCGAT 59.825 55.0 9.0 0.0 0.0 4.58 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
34 35 4.796495 GGCCGTGGGTGGGATGAC 62.796 72.222 0.00 0.00 0.00 3.06
35 36 4.028490 GCCGTGGGTGGGATGACA 62.028 66.667 0.00 0.00 0.00 3.58
36 37 2.753701 CCGTGGGTGGGATGACAA 59.246 61.111 0.00 0.00 0.00 3.18
37 38 1.377202 CCGTGGGTGGGATGACAAG 60.377 63.158 0.00 0.00 0.00 3.16
38 39 1.377202 CGTGGGTGGGATGACAAGG 60.377 63.158 0.00 0.00 0.00 3.61
39 40 1.000896 GTGGGTGGGATGACAAGGG 60.001 63.158 0.00 0.00 0.00 3.95
40 41 2.043953 GGGTGGGATGACAAGGGC 60.044 66.667 0.00 0.00 0.00 5.19
41 42 2.616458 GGGTGGGATGACAAGGGCT 61.616 63.158 0.00 0.00 0.00 5.19
42 43 1.077429 GGTGGGATGACAAGGGCTC 60.077 63.158 0.00 0.00 0.00 4.70
43 44 1.450312 GTGGGATGACAAGGGCTCG 60.450 63.158 0.00 0.00 0.00 5.03
44 45 1.918293 TGGGATGACAAGGGCTCGT 60.918 57.895 0.00 0.00 0.00 4.18
45 46 1.450312 GGGATGACAAGGGCTCGTG 60.450 63.158 0.00 0.00 0.00 4.35
46 47 1.450312 GGATGACAAGGGCTCGTGG 60.450 63.158 4.07 0.00 0.00 4.94
47 48 1.450312 GATGACAAGGGCTCGTGGG 60.450 63.158 4.07 0.00 0.00 4.61
48 49 2.876368 GATGACAAGGGCTCGTGGGG 62.876 65.000 4.07 0.00 0.00 4.96
49 50 4.410400 GACAAGGGCTCGTGGGGG 62.410 72.222 4.07 0.00 0.00 5.40
66 67 4.382320 GCACGCCAAGTACCCCGA 62.382 66.667 0.00 0.00 0.00 5.14
67 68 2.433664 CACGCCAAGTACCCCGAC 60.434 66.667 0.00 0.00 0.00 4.79
68 69 4.060038 ACGCCAAGTACCCCGACG 62.060 66.667 0.00 0.00 0.00 5.12
69 70 4.807039 CGCCAAGTACCCCGACGG 62.807 72.222 6.99 6.99 37.81 4.79
71 72 4.462280 CCAAGTACCCCGACGGCC 62.462 72.222 8.86 0.00 33.26 6.13
72 73 3.697747 CAAGTACCCCGACGGCCA 61.698 66.667 8.86 0.00 33.26 5.36
73 74 2.686106 AAGTACCCCGACGGCCAT 60.686 61.111 8.86 0.00 33.26 4.40
74 75 3.026431 AAGTACCCCGACGGCCATG 62.026 63.158 8.86 0.00 33.26 3.66
75 76 4.540735 GTACCCCGACGGCCATGG 62.541 72.222 8.86 7.63 33.26 3.66
80 81 4.473520 CCGACGGCCATGGCTTCT 62.474 66.667 34.70 17.94 41.60 2.85
81 82 3.197790 CGACGGCCATGGCTTCTG 61.198 66.667 34.70 23.30 41.60 3.02
82 83 2.825836 GACGGCCATGGCTTCTGG 60.826 66.667 34.70 20.49 41.60 3.86
83 84 3.329542 GACGGCCATGGCTTCTGGA 62.330 63.158 34.70 0.00 41.60 3.86
84 85 2.825836 CGGCCATGGCTTCTGGAC 60.826 66.667 34.70 16.14 41.60 4.02
85 86 2.440980 GGCCATGGCTTCTGGACC 60.441 66.667 34.70 13.03 35.59 4.46
86 87 2.679716 GCCATGGCTTCTGGACCT 59.320 61.111 29.98 0.00 35.70 3.85
87 88 1.751927 GCCATGGCTTCTGGACCTG 60.752 63.158 29.98 0.00 35.70 4.00
88 89 1.077212 CCATGGCTTCTGGACCTGG 60.077 63.158 0.00 0.00 35.70 4.45
89 90 1.751927 CATGGCTTCTGGACCTGGC 60.752 63.158 0.00 0.00 0.00 4.85
90 91 2.233566 ATGGCTTCTGGACCTGGCA 61.234 57.895 0.00 2.76 39.22 4.92
91 92 2.360475 GGCTTCTGGACCTGGCAC 60.360 66.667 0.00 0.00 0.00 5.01
92 93 2.431683 GCTTCTGGACCTGGCACA 59.568 61.111 0.00 0.00 0.00 4.57
116 117 4.357947 GTGTGTCGCGCTGGAGGA 62.358 66.667 5.56 0.00 0.00 3.71
117 118 4.357947 TGTGTCGCGCTGGAGGAC 62.358 66.667 5.56 5.55 0.00 3.85
151 152 4.803426 GGTGCCTCAGCTCCGTCG 62.803 72.222 0.00 0.00 42.42 5.12
152 153 4.057428 GTGCCTCAGCTCCGTCGT 62.057 66.667 0.00 0.00 40.80 4.34
153 154 3.749064 TGCCTCAGCTCCGTCGTC 61.749 66.667 0.00 0.00 40.80 4.20
154 155 4.838486 GCCTCAGCTCCGTCGTCG 62.838 72.222 0.00 0.00 35.50 5.12
164 165 4.831307 CGTCGTCGGGAAGGAGCG 62.831 72.222 0.00 0.00 0.00 5.03
165 166 4.493747 GTCGTCGGGAAGGAGCGG 62.494 72.222 0.00 0.00 0.00 5.52
168 169 3.839432 GTCGGGAAGGAGCGGGAG 61.839 72.222 0.00 0.00 0.00 4.30
169 170 4.056584 TCGGGAAGGAGCGGGAGA 62.057 66.667 0.00 0.00 0.00 3.71
170 171 3.839432 CGGGAAGGAGCGGGAGAC 61.839 72.222 0.00 0.00 0.00 3.36
172 173 3.839432 GGAAGGAGCGGGAGACGG 61.839 72.222 0.00 0.00 44.51 4.79
180 181 3.450115 CGGGAGACGGTGGAGGAC 61.450 72.222 0.00 0.00 39.42 3.85
181 182 3.450115 GGGAGACGGTGGAGGACG 61.450 72.222 0.00 0.00 0.00 4.79
182 183 4.131088 GGAGACGGTGGAGGACGC 62.131 72.222 0.00 0.00 0.00 5.19
183 184 4.131088 GAGACGGTGGAGGACGCC 62.131 72.222 0.00 0.00 46.57 5.68
191 192 4.436998 GGAGGACGCCGTGGTGAG 62.437 72.222 6.43 0.00 0.00 3.51
192 193 4.436998 GAGGACGCCGTGGTGAGG 62.437 72.222 6.43 0.00 0.00 3.86
194 195 4.309950 GGACGCCGTGGTGAGGTT 62.310 66.667 6.43 0.00 0.00 3.50
195 196 2.737376 GACGCCGTGGTGAGGTTC 60.737 66.667 6.43 0.00 0.00 3.62
196 197 4.309950 ACGCCGTGGTGAGGTTCC 62.310 66.667 6.43 0.00 0.00 3.62
198 199 4.717313 GCCGTGGTGAGGTTCCCC 62.717 72.222 0.00 0.00 0.00 4.81
199 200 3.246112 CCGTGGTGAGGTTCCCCA 61.246 66.667 0.00 0.00 0.00 4.96
200 201 2.602676 CCGTGGTGAGGTTCCCCAT 61.603 63.158 0.00 0.00 0.00 4.00
201 202 1.378762 CGTGGTGAGGTTCCCCATT 59.621 57.895 0.00 0.00 0.00 3.16
202 203 0.676782 CGTGGTGAGGTTCCCCATTC 60.677 60.000 0.00 0.00 0.00 2.67
203 204 0.676782 GTGGTGAGGTTCCCCATTCG 60.677 60.000 0.00 0.00 0.00 3.34
204 205 1.131303 TGGTGAGGTTCCCCATTCGT 61.131 55.000 0.00 0.00 0.00 3.85
205 206 0.676782 GGTGAGGTTCCCCATTCGTG 60.677 60.000 0.00 0.00 0.00 4.35
206 207 1.002624 TGAGGTTCCCCATTCGTGC 60.003 57.895 0.00 0.00 0.00 5.34
207 208 2.046314 AGGTTCCCCATTCGTGCG 60.046 61.111 0.00 0.00 0.00 5.34
208 209 3.131478 GGTTCCCCATTCGTGCGG 61.131 66.667 0.00 0.00 0.00 5.69
209 210 2.046700 GTTCCCCATTCGTGCGGA 60.047 61.111 0.00 0.00 0.00 5.54
210 211 1.451387 GTTCCCCATTCGTGCGGAT 60.451 57.895 0.00 0.00 0.00 4.18
211 212 1.153249 TTCCCCATTCGTGCGGATC 60.153 57.895 0.00 0.00 0.00 3.36
212 213 1.904990 TTCCCCATTCGTGCGGATCA 61.905 55.000 0.00 0.00 0.00 2.92
213 214 1.889105 CCCCATTCGTGCGGATCAG 60.889 63.158 0.00 0.00 0.00 2.90
214 215 2.537560 CCCATTCGTGCGGATCAGC 61.538 63.158 11.23 11.23 37.71 4.26
215 216 2.622629 CATTCGTGCGGATCAGCG 59.377 61.111 13.25 0.00 40.67 5.18
216 217 1.878069 CATTCGTGCGGATCAGCGA 60.878 57.895 13.25 2.44 40.67 4.93
217 218 1.878522 ATTCGTGCGGATCAGCGAC 60.879 57.895 13.25 10.93 40.67 5.19
218 219 4.829518 TCGTGCGGATCAGCGACG 62.830 66.667 24.81 24.81 40.35 5.12
295 296 4.100084 CCATGCGCCAGGTCCAGA 62.100 66.667 4.18 0.00 0.00 3.86
296 297 2.046023 CATGCGCCAGGTCCAGAA 60.046 61.111 4.18 0.00 0.00 3.02
297 298 2.110967 CATGCGCCAGGTCCAGAAG 61.111 63.158 4.18 0.00 0.00 2.85
298 299 3.984193 ATGCGCCAGGTCCAGAAGC 62.984 63.158 4.18 0.00 0.00 3.86
300 301 4.020617 CGCCAGGTCCAGAAGCCA 62.021 66.667 0.00 0.00 0.00 4.75
301 302 2.679716 GCCAGGTCCAGAAGCCAT 59.320 61.111 0.00 0.00 0.00 4.40
302 303 1.751927 GCCAGGTCCAGAAGCCATG 60.752 63.158 0.00 0.00 0.00 3.66
303 304 1.077212 CCAGGTCCAGAAGCCATGG 60.077 63.158 7.63 7.63 39.33 3.66
304 305 1.751927 CAGGTCCAGAAGCCATGGC 60.752 63.158 30.12 30.12 37.76 4.40
314 315 2.045926 GCCATGGCTGGTCGAGTT 60.046 61.111 29.98 0.00 45.10 3.01
315 316 2.401766 GCCATGGCTGGTCGAGTTG 61.402 63.158 29.98 0.00 45.10 3.16
316 317 2.401766 CCATGGCTGGTCGAGTTGC 61.402 63.158 0.00 0.00 37.79 4.17
317 318 1.376424 CATGGCTGGTCGAGTTGCT 60.376 57.895 0.00 0.00 0.00 3.91
318 319 1.078848 ATGGCTGGTCGAGTTGCTC 60.079 57.895 0.00 0.00 0.00 4.26
327 328 2.507324 GAGTTGCTCGAGACGCCC 60.507 66.667 18.75 0.00 0.00 6.13
328 329 4.421479 AGTTGCTCGAGACGCCCG 62.421 66.667 18.75 0.00 0.00 6.13
346 347 3.958860 GCAGGCCACACTGGTCCT 61.959 66.667 5.01 0.00 45.08 3.85
347 348 2.033141 CAGGCCACACTGGTCCTG 59.967 66.667 5.01 13.80 45.08 3.86
348 349 3.252284 AGGCCACACTGGTCCTGG 61.252 66.667 5.01 0.00 45.08 4.45
349 350 3.570212 GGCCACACTGGTCCTGGT 61.570 66.667 0.00 0.00 40.46 4.00
350 351 2.032681 GCCACACTGGTCCTGGTC 59.967 66.667 0.33 0.00 40.46 4.02
351 352 2.520536 GCCACACTGGTCCTGGTCT 61.521 63.158 0.33 0.00 40.46 3.85
352 353 1.674057 CCACACTGGTCCTGGTCTC 59.326 63.158 0.33 0.00 31.35 3.36
353 354 1.674057 CACACTGGTCCTGGTCTCC 59.326 63.158 0.33 0.00 0.00 3.71
354 355 1.908793 ACACTGGTCCTGGTCTCCG 60.909 63.158 0.33 0.00 0.00 4.63
355 356 2.283966 ACTGGTCCTGGTCTCCGG 60.284 66.667 0.00 0.00 0.00 5.14
356 357 3.775654 CTGGTCCTGGTCTCCGGC 61.776 72.222 0.00 0.00 0.00 6.13
359 360 3.379445 GTCCTGGTCTCCGGCGAA 61.379 66.667 9.30 0.00 0.00 4.70
360 361 3.068691 TCCTGGTCTCCGGCGAAG 61.069 66.667 9.30 0.00 0.00 3.79
361 362 4.148825 CCTGGTCTCCGGCGAAGG 62.149 72.222 9.30 0.00 0.00 3.46
362 363 4.148825 CTGGTCTCCGGCGAAGGG 62.149 72.222 9.30 0.00 0.00 3.95
365 366 3.155167 GTCTCCGGCGAAGGGGAT 61.155 66.667 9.30 0.00 43.71 3.85
366 367 3.154473 TCTCCGGCGAAGGGGATG 61.154 66.667 9.30 0.00 35.46 3.51
367 368 4.241555 CTCCGGCGAAGGGGATGG 62.242 72.222 9.30 0.00 32.01 3.51
368 369 4.789173 TCCGGCGAAGGGGATGGA 62.789 66.667 9.30 0.00 0.00 3.41
369 370 4.241555 CCGGCGAAGGGGATGGAG 62.242 72.222 9.30 0.00 0.00 3.86
370 371 3.470888 CGGCGAAGGGGATGGAGT 61.471 66.667 0.00 0.00 0.00 3.85
371 372 2.506472 GGCGAAGGGGATGGAGTC 59.494 66.667 0.00 0.00 0.00 3.36
379 380 2.512515 GGATGGAGTCCACGCTGC 60.513 66.667 15.86 0.00 46.96 5.25
380 381 2.581354 GATGGAGTCCACGCTGCT 59.419 61.111 15.86 0.00 35.80 4.24
381 382 1.812922 GATGGAGTCCACGCTGCTG 60.813 63.158 15.86 0.00 35.80 4.41
382 383 2.513026 GATGGAGTCCACGCTGCTGT 62.513 60.000 15.86 0.00 35.80 4.40
383 384 2.433318 GGAGTCCACGCTGCTGTC 60.433 66.667 3.60 0.00 0.00 3.51
384 385 2.433318 GAGTCCACGCTGCTGTCC 60.433 66.667 0.00 0.00 0.00 4.02
385 386 4.363990 AGTCCACGCTGCTGTCCG 62.364 66.667 0.00 0.00 0.00 4.79
386 387 4.664677 GTCCACGCTGCTGTCCGT 62.665 66.667 0.00 0.00 38.35 4.69
492 493 1.641577 GGTGACGAGTGGATAAGTGC 58.358 55.000 0.00 0.00 0.00 4.40
493 494 1.269166 GTGACGAGTGGATAAGTGCG 58.731 55.000 0.00 0.00 0.00 5.34
494 495 0.885879 TGACGAGTGGATAAGTGCGT 59.114 50.000 0.00 0.00 34.39 5.24
495 496 1.269166 GACGAGTGGATAAGTGCGTG 58.731 55.000 0.00 0.00 31.58 5.34
496 497 0.108804 ACGAGTGGATAAGTGCGTGG 60.109 55.000 0.00 0.00 0.00 4.94
497 498 0.806102 CGAGTGGATAAGTGCGTGGG 60.806 60.000 0.00 0.00 0.00 4.61
498 499 0.249398 GAGTGGATAAGTGCGTGGGT 59.751 55.000 0.00 0.00 0.00 4.51
499 500 0.036388 AGTGGATAAGTGCGTGGGTG 60.036 55.000 0.00 0.00 0.00 4.61
500 501 1.024579 GTGGATAAGTGCGTGGGTGG 61.025 60.000 0.00 0.00 0.00 4.61
501 502 1.451387 GGATAAGTGCGTGGGTGGG 60.451 63.158 0.00 0.00 0.00 4.61
502 503 1.451387 GATAAGTGCGTGGGTGGGG 60.451 63.158 0.00 0.00 0.00 4.96
503 504 3.638592 ATAAGTGCGTGGGTGGGGC 62.639 63.158 0.00 0.00 0.00 5.80
509 510 4.358841 CGTGGGTGGGGCCAATGA 62.359 66.667 4.39 0.00 39.65 2.57
510 511 2.362889 GTGGGTGGGGCCAATGAG 60.363 66.667 4.39 0.00 39.65 2.90
511 512 2.863484 TGGGTGGGGCCAATGAGT 60.863 61.111 4.39 0.00 39.65 3.41
512 513 2.362889 GGGTGGGGCCAATGAGTG 60.363 66.667 4.39 0.00 39.65 3.51
526 527 5.362556 CAATGAGTGGACATTTTCTCGTT 57.637 39.130 0.00 0.00 38.25 3.85
527 528 5.385617 CAATGAGTGGACATTTTCTCGTTC 58.614 41.667 0.00 0.00 38.25 3.95
528 529 4.066646 TGAGTGGACATTTTCTCGTTCA 57.933 40.909 0.00 0.00 0.00 3.18
529 530 3.807622 TGAGTGGACATTTTCTCGTTCAC 59.192 43.478 0.00 0.00 41.22 3.18
530 531 3.804036 AGTGGACATTTTCTCGTTCACA 58.196 40.909 3.95 0.00 43.01 3.58
531 532 4.196193 AGTGGACATTTTCTCGTTCACAA 58.804 39.130 3.95 0.00 43.01 3.33
532 533 4.273480 AGTGGACATTTTCTCGTTCACAAG 59.727 41.667 3.95 0.00 43.01 3.16
533 534 3.563808 TGGACATTTTCTCGTTCACAAGG 59.436 43.478 0.00 0.00 0.00 3.61
534 535 3.813166 GGACATTTTCTCGTTCACAAGGA 59.187 43.478 0.00 0.00 0.00 3.36
535 536 4.274950 GGACATTTTCTCGTTCACAAGGAA 59.725 41.667 0.00 0.00 0.00 3.36
536 537 5.220970 GGACATTTTCTCGTTCACAAGGAAA 60.221 40.000 0.00 0.00 37.23 3.13
537 538 6.202516 ACATTTTCTCGTTCACAAGGAAAA 57.797 33.333 0.00 0.00 39.23 2.29
538 539 6.626302 ACATTTTCTCGTTCACAAGGAAAAA 58.374 32.000 0.00 0.00 38.68 1.94
552 553 4.260194 AAAAATTTCGCCGGCAGC 57.740 50.000 28.98 0.00 38.52 5.25
553 554 1.374125 AAAAATTTCGCCGGCAGCC 60.374 52.632 28.98 0.00 38.78 4.85
554 555 2.779951 AAAAATTTCGCCGGCAGCCC 62.780 55.000 28.98 0.00 38.78 5.19
570 571 4.079827 CCCCCAGGAGATGCTCTT 57.920 61.111 0.00 0.00 33.47 2.85
571 572 3.247424 CCCCCAGGAGATGCTCTTA 57.753 57.895 0.00 0.00 33.47 2.10
572 573 1.511613 CCCCCAGGAGATGCTCTTAA 58.488 55.000 0.00 0.00 33.47 1.85
573 574 1.419387 CCCCCAGGAGATGCTCTTAAG 59.581 57.143 0.00 0.00 33.47 1.85
574 575 2.122768 CCCCAGGAGATGCTCTTAAGT 58.877 52.381 1.63 0.00 0.00 2.24
575 576 3.309296 CCCCAGGAGATGCTCTTAAGTA 58.691 50.000 1.63 0.00 0.00 2.24
576 577 3.906846 CCCCAGGAGATGCTCTTAAGTAT 59.093 47.826 1.63 0.00 0.00 2.12
577 578 5.087323 CCCCAGGAGATGCTCTTAAGTATA 58.913 45.833 1.63 0.00 0.00 1.47
578 579 5.723887 CCCCAGGAGATGCTCTTAAGTATAT 59.276 44.000 1.63 0.00 0.00 0.86
579 580 6.897966 CCCCAGGAGATGCTCTTAAGTATATA 59.102 42.308 1.63 0.00 0.00 0.86
580 581 7.069331 CCCCAGGAGATGCTCTTAAGTATATAG 59.931 44.444 1.63 0.00 0.00 1.31
581 582 7.069331 CCCAGGAGATGCTCTTAAGTATATAGG 59.931 44.444 1.63 0.00 0.00 2.57
582 583 7.836685 CCAGGAGATGCTCTTAAGTATATAGGA 59.163 40.741 1.63 0.00 0.00 2.94
583 584 9.420118 CAGGAGATGCTCTTAAGTATATAGGAT 57.580 37.037 1.63 0.00 0.00 3.24
716 723 9.000486 GTATATCCACCAAACTCCTAAAATAGC 58.000 37.037 0.00 0.00 0.00 2.97
722 729 6.825721 CACCAAACTCCTAAAATAGCAGAGAT 59.174 38.462 0.00 0.00 0.00 2.75
749 756 4.987963 TTCCATGCATATCCACATCTCT 57.012 40.909 0.00 0.00 0.00 3.10
759 766 7.093596 TGCATATCCACATCTCTCATAAGGTAG 60.094 40.741 0.00 0.00 0.00 3.18
761 768 6.909550 ATCCACATCTCTCATAAGGTAGTC 57.090 41.667 0.00 0.00 0.00 2.59
873 880 6.035843 CGCCACAATTTTCAGTATAAAGCAT 58.964 36.000 0.00 0.00 0.00 3.79
898 905 4.697352 CCTGAATTCCAATATCACGATCCC 59.303 45.833 2.27 0.00 0.00 3.85
899 906 5.513788 CCTGAATTCCAATATCACGATCCCT 60.514 44.000 2.27 0.00 0.00 4.20
900 907 5.551233 TGAATTCCAATATCACGATCCCTC 58.449 41.667 2.27 0.00 0.00 4.30
901 908 4.559862 ATTCCAATATCACGATCCCTCC 57.440 45.455 0.00 0.00 0.00 4.30
956 976 5.239359 TCCAAAATCATCAATCAGCTTCG 57.761 39.130 0.00 0.00 0.00 3.79
1167 1188 1.802960 AGCGACTTTGACATGCTCAAG 59.197 47.619 9.59 4.46 40.12 3.02
1176 1197 1.003580 GACATGCTCAAGGTCCTTGGA 59.996 52.381 27.79 15.32 41.33 3.53
1746 1779 0.539051 CCGTCCTGGAGCTTCTGATT 59.461 55.000 0.00 0.00 42.00 2.57
1821 1854 1.522355 CGCCATCTGCTTCGGTGAT 60.522 57.895 0.00 0.00 38.05 3.06
1901 1935 2.266055 GCAGAAGGACCACCGGAG 59.734 66.667 9.46 0.00 41.83 4.63
2001 2035 3.906649 GTGATCGAGCAGCGCGTG 61.907 66.667 18.51 6.12 40.61 5.34
2010 2044 1.453524 GAGCAGCGCGTGTAGATATTG 59.546 52.381 8.43 0.00 0.00 1.90
2011 2045 0.508641 GCAGCGCGTGTAGATATTGG 59.491 55.000 8.43 0.00 0.00 3.16
2023 2057 4.954202 TGTAGATATTGGACTGTCCGTTCT 59.046 41.667 21.15 19.47 40.17 3.01
2035 2069 2.067013 GTCCGTTCTCAAACTGTAGCC 58.933 52.381 0.00 0.00 32.95 3.93
2037 2071 2.103432 TCCGTTCTCAAACTGTAGCCAA 59.897 45.455 0.00 0.00 32.95 4.52
2075 2109 5.422012 TGCAGATACAGATAGTGGAAGAACA 59.578 40.000 0.00 0.00 0.00 3.18
2154 2195 3.124466 CCGTTGCATTATTTCTGTCGACA 59.876 43.478 18.88 18.88 0.00 4.35
2178 2219 9.234827 ACAAGATTACAGATCATCAATTTGACA 57.765 29.630 0.15 0.00 0.00 3.58
2199 2240 0.108329 CGCTAACCAGGGAACGTCAT 60.108 55.000 0.00 0.00 36.87 3.06
2204 2245 3.726291 AACCAGGGAACGTCATTTTTG 57.274 42.857 0.00 0.00 0.00 2.44
2205 2246 2.661718 ACCAGGGAACGTCATTTTTGT 58.338 42.857 0.00 0.00 0.00 2.83
2220 2261 5.538053 TCATTTTTGTAAGCAATCCCAGTGA 59.462 36.000 0.00 0.00 34.18 3.41
2223 2264 3.500448 TGTAAGCAATCCCAGTGAACA 57.500 42.857 0.00 0.00 0.00 3.18
2230 2271 3.437049 GCAATCCCAGTGAACACTCTTAC 59.563 47.826 4.38 0.00 40.20 2.34
2249 2290 2.104170 ACAGCAAGTCTAGTAGAGCCC 58.896 52.381 0.00 0.00 0.00 5.19
2252 2293 1.335496 GCAAGTCTAGTAGAGCCCTCG 59.665 57.143 0.00 0.00 34.09 4.63
2276 2317 6.015265 CGAACCCTCAAACCCCTAAAAATAAA 60.015 38.462 0.00 0.00 0.00 1.40
2279 2320 6.112734 CCCTCAAACCCCTAAAAATAAATGC 58.887 40.000 0.00 0.00 0.00 3.56
2280 2321 6.112734 CCTCAAACCCCTAAAAATAAATGCC 58.887 40.000 0.00 0.00 0.00 4.40
2366 2408 4.657814 AAATTTAGAGCTCCAACCCTCA 57.342 40.909 10.93 0.00 0.00 3.86
2377 2419 1.686587 CCAACCCTCAAACTGTTTCCC 59.313 52.381 2.13 0.00 0.00 3.97
2408 2450 4.166144 AGAAGTGAGGGTTGAGAGGAAAAA 59.834 41.667 0.00 0.00 0.00 1.94
2410 2452 3.459969 AGTGAGGGTTGAGAGGAAAAACT 59.540 43.478 0.00 0.00 0.00 2.66
2411 2453 4.079730 AGTGAGGGTTGAGAGGAAAAACTT 60.080 41.667 0.00 0.00 0.00 2.66
2432 2477 2.325082 CCCAACCCGCACTCTTTCG 61.325 63.158 0.00 0.00 0.00 3.46
2434 2479 1.566018 CCAACCCGCACTCTTTCGTC 61.566 60.000 0.00 0.00 0.00 4.20
2437 2482 1.801913 CCCGCACTCTTTCGTCTCG 60.802 63.158 0.00 0.00 0.00 4.04
2590 3219 3.500642 GAAGCCGCGGAAGAAGCC 61.501 66.667 33.48 9.31 0.00 4.35
2663 3292 4.452733 GAACCTCCTCCCGCCGTG 62.453 72.222 0.00 0.00 0.00 4.94
2716 3345 0.041238 TCGTTCATGGACCTCCTCCT 59.959 55.000 0.00 0.00 40.26 3.69
2717 3346 0.176680 CGTTCATGGACCTCCTCCTG 59.823 60.000 0.00 0.00 40.26 3.86
2718 3347 1.280457 GTTCATGGACCTCCTCCTGT 58.720 55.000 0.00 0.00 40.26 4.00
2719 3348 1.630878 GTTCATGGACCTCCTCCTGTT 59.369 52.381 0.00 0.00 40.26 3.16
2720 3349 1.279496 TCATGGACCTCCTCCTGTTG 58.721 55.000 0.00 0.00 40.26 3.33
2721 3350 0.254178 CATGGACCTCCTCCTGTTGG 59.746 60.000 0.00 0.00 40.26 3.77
2722 3351 0.916358 ATGGACCTCCTCCTGTTGGG 60.916 60.000 0.00 0.00 40.26 4.12
2723 3352 2.301738 GGACCTCCTCCTGTTGGGG 61.302 68.421 0.00 0.00 35.89 4.96
2724 3353 1.229529 GACCTCCTCCTGTTGGGGA 60.230 63.158 0.00 0.00 35.23 4.81
2725 3354 0.840722 GACCTCCTCCTGTTGGGGAA 60.841 60.000 0.00 0.00 35.23 3.97
2726 3355 1.134438 ACCTCCTCCTGTTGGGGAAC 61.134 60.000 0.00 0.00 35.23 3.62
2727 3356 1.296715 CTCCTCCTGTTGGGGAACG 59.703 63.158 0.00 0.00 35.23 3.95
2728 3357 1.460689 TCCTCCTGTTGGGGAACGT 60.461 57.895 0.00 0.00 35.23 3.99
2729 3358 1.057851 TCCTCCTGTTGGGGAACGTT 61.058 55.000 0.00 0.00 35.23 3.99
2730 3359 0.889186 CCTCCTGTTGGGGAACGTTG 60.889 60.000 5.00 0.00 35.23 4.10
2731 3360 1.515521 CTCCTGTTGGGGAACGTTGC 61.516 60.000 11.85 11.85 35.23 4.17
2732 3361 1.826054 CCTGTTGGGGAACGTTGCA 60.826 57.895 21.74 0.00 0.00 4.08
2733 3362 1.654220 CTGTTGGGGAACGTTGCAG 59.346 57.895 21.74 5.93 0.00 4.41
2734 3363 0.817634 CTGTTGGGGAACGTTGCAGA 60.818 55.000 21.74 3.97 0.00 4.26
2735 3364 0.394488 TGTTGGGGAACGTTGCAGAA 60.394 50.000 21.74 10.10 0.00 3.02
2736 3365 0.741915 GTTGGGGAACGTTGCAGAAA 59.258 50.000 21.74 9.26 0.00 2.52
2737 3366 1.135333 GTTGGGGAACGTTGCAGAAAA 59.865 47.619 21.74 6.84 0.00 2.29
2738 3367 0.741915 TGGGGAACGTTGCAGAAAAC 59.258 50.000 21.74 2.56 0.00 2.43
2739 3368 0.741915 GGGGAACGTTGCAGAAAACA 59.258 50.000 21.74 0.00 0.00 2.83
2740 3369 1.135333 GGGGAACGTTGCAGAAAACAA 59.865 47.619 21.74 0.00 0.00 2.83
2741 3370 2.417515 GGGGAACGTTGCAGAAAACAAA 60.418 45.455 21.74 0.00 0.00 2.83
2742 3371 3.254892 GGGAACGTTGCAGAAAACAAAA 58.745 40.909 21.74 0.00 0.00 2.44
2743 3372 3.680458 GGGAACGTTGCAGAAAACAAAAA 59.320 39.130 21.74 0.00 0.00 1.94
2763 3392 5.855740 AAAAATTCCTACGGTTTCACCAA 57.144 34.783 0.00 0.00 38.47 3.67
2764 3393 5.447624 AAAATTCCTACGGTTTCACCAAG 57.552 39.130 0.00 0.00 38.47 3.61
2765 3394 4.360951 AATTCCTACGGTTTCACCAAGA 57.639 40.909 0.00 0.00 38.47 3.02
2766 3395 4.569719 ATTCCTACGGTTTCACCAAGAT 57.430 40.909 0.00 0.00 38.47 2.40
2767 3396 3.604875 TCCTACGGTTTCACCAAGATC 57.395 47.619 0.00 0.00 38.47 2.75
2768 3397 2.901192 TCCTACGGTTTCACCAAGATCA 59.099 45.455 0.00 0.00 38.47 2.92
2769 3398 3.325425 TCCTACGGTTTCACCAAGATCAA 59.675 43.478 0.00 0.00 38.47 2.57
2770 3399 4.019681 TCCTACGGTTTCACCAAGATCAAT 60.020 41.667 0.00 0.00 38.47 2.57
2771 3400 4.332819 CCTACGGTTTCACCAAGATCAATC 59.667 45.833 0.00 0.00 38.47 2.67
2772 3401 4.021102 ACGGTTTCACCAAGATCAATCT 57.979 40.909 0.00 0.00 38.47 2.40
2773 3402 5.160607 ACGGTTTCACCAAGATCAATCTA 57.839 39.130 0.00 0.00 38.47 1.98
2774 3403 5.745227 ACGGTTTCACCAAGATCAATCTAT 58.255 37.500 0.00 0.00 38.47 1.98
2775 3404 5.586243 ACGGTTTCACCAAGATCAATCTATG 59.414 40.000 0.00 0.00 38.47 2.23
2776 3405 5.817296 CGGTTTCACCAAGATCAATCTATGA 59.183 40.000 0.00 0.00 39.55 2.15
2777 3406 6.018425 CGGTTTCACCAAGATCAATCTATGAG 60.018 42.308 0.00 0.00 38.91 2.90
2778 3407 6.825721 GGTTTCACCAAGATCAATCTATGAGT 59.174 38.462 0.00 0.00 38.84 3.41
2779 3408 7.337942 GGTTTCACCAAGATCAATCTATGAGTT 59.662 37.037 0.00 0.00 38.84 3.01
2780 3409 8.394121 GTTTCACCAAGATCAATCTATGAGTTC 58.606 37.037 0.00 0.00 42.53 3.01
2781 3410 7.186570 TCACCAAGATCAATCTATGAGTTCA 57.813 36.000 0.00 0.00 42.53 3.18
2782 3411 7.799081 TCACCAAGATCAATCTATGAGTTCAT 58.201 34.615 0.00 0.00 42.53 2.57
2783 3412 7.930325 TCACCAAGATCAATCTATGAGTTCATC 59.070 37.037 0.00 0.00 42.53 2.92
2784 3413 7.932491 CACCAAGATCAATCTATGAGTTCATCT 59.068 37.037 0.00 0.00 42.53 2.90
2785 3414 9.152327 ACCAAGATCAATCTATGAGTTCATCTA 57.848 33.333 0.00 0.00 42.53 1.98
2786 3415 9.642327 CCAAGATCAATCTATGAGTTCATCTAG 57.358 37.037 0.00 0.00 42.53 2.43
2787 3416 9.142515 CAAGATCAATCTATGAGTTCATCTAGC 57.857 37.037 0.00 0.00 42.53 3.42
2788 3417 8.419922 AGATCAATCTATGAGTTCATCTAGCA 57.580 34.615 0.00 0.00 42.53 3.49
2789 3418 8.868103 AGATCAATCTATGAGTTCATCTAGCAA 58.132 33.333 0.00 0.00 42.53 3.91
2790 3419 8.830201 ATCAATCTATGAGTTCATCTAGCAAC 57.170 34.615 0.00 0.00 42.53 4.17
2791 3420 6.920210 TCAATCTATGAGTTCATCTAGCAACG 59.080 38.462 0.00 0.00 37.76 4.10
2792 3421 6.641169 ATCTATGAGTTCATCTAGCAACGA 57.359 37.500 0.00 0.00 37.76 3.85
2793 3422 6.066054 TCTATGAGTTCATCTAGCAACGAG 57.934 41.667 0.00 0.00 37.76 4.18
2794 3423 4.991153 ATGAGTTCATCTAGCAACGAGA 57.009 40.909 0.00 0.00 28.78 4.04
2795 3424 4.783764 TGAGTTCATCTAGCAACGAGAA 57.216 40.909 0.00 0.00 0.00 2.87
2796 3425 5.134202 TGAGTTCATCTAGCAACGAGAAA 57.866 39.130 0.00 0.00 0.00 2.52
2797 3426 5.164233 TGAGTTCATCTAGCAACGAGAAAG 58.836 41.667 0.00 0.00 0.00 2.62
2798 3427 5.048013 TGAGTTCATCTAGCAACGAGAAAGA 60.048 40.000 0.00 0.00 0.00 2.52
2799 3428 5.406649 AGTTCATCTAGCAACGAGAAAGAG 58.593 41.667 0.00 0.00 0.00 2.85
2800 3429 4.377839 TCATCTAGCAACGAGAAAGAGG 57.622 45.455 0.00 0.00 0.00 3.69
2801 3430 4.017126 TCATCTAGCAACGAGAAAGAGGA 58.983 43.478 0.00 0.00 0.00 3.71
2802 3431 4.097135 TCATCTAGCAACGAGAAAGAGGAG 59.903 45.833 0.00 0.00 0.00 3.69
2803 3432 3.422796 TCTAGCAACGAGAAAGAGGAGT 58.577 45.455 0.00 0.00 0.00 3.85
2804 3433 2.447244 AGCAACGAGAAAGAGGAGTG 57.553 50.000 0.00 0.00 0.00 3.51
2805 3434 0.793250 GCAACGAGAAAGAGGAGTGC 59.207 55.000 0.00 0.00 0.00 4.40
2806 3435 1.873903 GCAACGAGAAAGAGGAGTGCA 60.874 52.381 0.00 0.00 0.00 4.57
2807 3436 2.064762 CAACGAGAAAGAGGAGTGCAG 58.935 52.381 0.00 0.00 0.00 4.41
2808 3437 0.037790 ACGAGAAAGAGGAGTGCAGC 60.038 55.000 0.00 0.00 0.00 5.25
2809 3438 0.246086 CGAGAAAGAGGAGTGCAGCT 59.754 55.000 0.00 0.00 0.00 4.24
2810 3439 1.474478 CGAGAAAGAGGAGTGCAGCTA 59.526 52.381 0.00 0.00 0.00 3.32
2811 3440 2.733858 CGAGAAAGAGGAGTGCAGCTAC 60.734 54.545 0.00 0.00 0.00 3.58
2812 3441 2.232452 GAGAAAGAGGAGTGCAGCTACA 59.768 50.000 0.00 0.00 0.00 2.74
2813 3442 2.836981 AGAAAGAGGAGTGCAGCTACAT 59.163 45.455 0.00 0.00 0.00 2.29
2814 3443 4.026744 AGAAAGAGGAGTGCAGCTACATA 58.973 43.478 0.00 0.00 0.00 2.29
2815 3444 3.810310 AAGAGGAGTGCAGCTACATAC 57.190 47.619 0.00 0.00 0.00 2.39
2816 3445 2.035632 AGAGGAGTGCAGCTACATACC 58.964 52.381 0.00 0.00 0.00 2.73
2817 3446 1.069358 GAGGAGTGCAGCTACATACCC 59.931 57.143 8.21 2.54 0.00 3.69
2818 3447 1.123928 GGAGTGCAGCTACATACCCT 58.876 55.000 0.00 0.00 0.00 4.34
2819 3448 1.486726 GGAGTGCAGCTACATACCCTT 59.513 52.381 0.00 0.00 0.00 3.95
2820 3449 2.555199 GAGTGCAGCTACATACCCTTG 58.445 52.381 0.00 0.00 0.00 3.61
2821 3450 1.909302 AGTGCAGCTACATACCCTTGT 59.091 47.619 0.00 0.00 0.00 3.16
2822 3451 3.104512 AGTGCAGCTACATACCCTTGTA 58.895 45.455 0.00 0.00 0.00 2.41
2831 3460 2.293677 ACATACCCTTGTAGATCGAGCG 59.706 50.000 0.00 0.00 0.00 5.03
2832 3461 1.315690 TACCCTTGTAGATCGAGCGG 58.684 55.000 0.00 0.00 0.00 5.52
2833 3462 0.395311 ACCCTTGTAGATCGAGCGGA 60.395 55.000 0.00 0.00 0.00 5.54
2834 3463 0.744874 CCCTTGTAGATCGAGCGGAA 59.255 55.000 0.00 0.00 0.00 4.30
2835 3464 1.269309 CCCTTGTAGATCGAGCGGAAG 60.269 57.143 0.00 0.00 0.00 3.46
2856 3485 2.249844 GTTCAAGAGAACGGGGTTGA 57.750 50.000 0.00 0.00 44.11 3.18
2857 3486 2.143925 GTTCAAGAGAACGGGGTTGAG 58.856 52.381 0.00 0.00 44.11 3.02
2858 3487 0.685097 TCAAGAGAACGGGGTTGAGG 59.315 55.000 0.00 0.00 0.00 3.86
2859 3488 0.321653 CAAGAGAACGGGGTTGAGGG 60.322 60.000 0.00 0.00 0.00 4.30
2860 3489 0.473117 AAGAGAACGGGGTTGAGGGA 60.473 55.000 0.00 0.00 0.00 4.20
2861 3490 0.905337 AGAGAACGGGGTTGAGGGAG 60.905 60.000 0.00 0.00 0.00 4.30
2862 3491 1.152096 AGAACGGGGTTGAGGGAGT 60.152 57.895 0.00 0.00 0.00 3.85
2863 3492 1.192803 AGAACGGGGTTGAGGGAGTC 61.193 60.000 0.00 0.00 0.00 3.36
2864 3493 2.502692 GAACGGGGTTGAGGGAGTCG 62.503 65.000 0.00 0.00 0.00 4.18
2865 3494 2.995574 CGGGGTTGAGGGAGTCGT 60.996 66.667 0.00 0.00 0.00 4.34
2866 3495 1.679977 CGGGGTTGAGGGAGTCGTA 60.680 63.158 0.00 0.00 0.00 3.43
2867 3496 1.895966 GGGGTTGAGGGAGTCGTAC 59.104 63.158 0.00 0.00 0.00 3.67
2868 3497 0.614134 GGGGTTGAGGGAGTCGTACT 60.614 60.000 0.00 0.00 0.00 2.73
2869 3498 0.816373 GGGTTGAGGGAGTCGTACTC 59.184 60.000 6.50 6.50 44.32 2.59
2870 3499 0.450983 GGTTGAGGGAGTCGTACTCG 59.549 60.000 8.33 0.00 45.96 4.18
2871 3500 1.163554 GTTGAGGGAGTCGTACTCGT 58.836 55.000 8.33 0.60 45.96 4.18
2872 3501 1.130186 GTTGAGGGAGTCGTACTCGTC 59.870 57.143 8.33 8.18 45.96 4.20
2873 3502 0.738762 TGAGGGAGTCGTACTCGTCG 60.739 60.000 8.33 0.00 45.96 5.12
2874 3503 0.739112 GAGGGAGTCGTACTCGTCGT 60.739 60.000 8.33 0.09 45.96 4.34
2875 3504 1.018226 AGGGAGTCGTACTCGTCGTG 61.018 60.000 8.33 0.00 45.96 4.35
2876 3505 1.016130 GGGAGTCGTACTCGTCGTGA 61.016 60.000 0.56 0.00 45.96 4.35
2877 3506 1.005340 GGAGTCGTACTCGTCGTGAT 58.995 55.000 0.56 0.00 45.96 3.06
2878 3507 1.005137 GGAGTCGTACTCGTCGTGATC 60.005 57.143 0.56 0.00 45.96 2.92
2879 3508 1.005137 GAGTCGTACTCGTCGTGATCC 60.005 57.143 0.56 0.00 35.28 3.36
2880 3509 0.723414 GTCGTACTCGTCGTGATCCA 59.277 55.000 0.56 0.00 38.33 3.41
2881 3510 1.129251 GTCGTACTCGTCGTGATCCAA 59.871 52.381 0.56 0.00 38.33 3.53
2882 3511 1.805943 TCGTACTCGTCGTGATCCAAA 59.194 47.619 0.56 0.00 38.33 3.28
2883 3512 2.421073 TCGTACTCGTCGTGATCCAAAT 59.579 45.455 0.56 0.00 38.33 2.32
2884 3513 3.622612 TCGTACTCGTCGTGATCCAAATA 59.377 43.478 0.56 0.00 38.33 1.40
2885 3514 4.094739 TCGTACTCGTCGTGATCCAAATAA 59.905 41.667 0.56 0.00 38.33 1.40
2886 3515 4.203764 CGTACTCGTCGTGATCCAAATAAC 59.796 45.833 0.56 0.00 0.00 1.89
2887 3516 3.518590 ACTCGTCGTGATCCAAATAACC 58.481 45.455 0.56 0.00 0.00 2.85
2888 3517 2.532235 TCGTCGTGATCCAAATAACCG 58.468 47.619 0.00 0.00 0.00 4.44
2889 3518 1.591158 CGTCGTGATCCAAATAACCGG 59.409 52.381 0.00 0.00 0.00 5.28
2890 3519 2.736081 CGTCGTGATCCAAATAACCGGA 60.736 50.000 9.46 0.00 35.27 5.14
2891 3520 2.864343 GTCGTGATCCAAATAACCGGAG 59.136 50.000 9.46 0.00 33.97 4.63
2892 3521 2.761767 TCGTGATCCAAATAACCGGAGA 59.238 45.455 9.46 0.00 33.97 3.71
2893 3522 3.386726 TCGTGATCCAAATAACCGGAGAT 59.613 43.478 9.46 0.00 33.97 2.75
2894 3523 3.741344 CGTGATCCAAATAACCGGAGATC 59.259 47.826 9.46 8.33 33.97 2.75
2895 3524 4.065789 GTGATCCAAATAACCGGAGATCC 58.934 47.826 9.46 0.00 33.97 3.36
2896 3525 3.973973 TGATCCAAATAACCGGAGATCCT 59.026 43.478 9.46 0.00 33.97 3.24
2897 3526 5.011738 GTGATCCAAATAACCGGAGATCCTA 59.988 44.000 9.46 0.00 33.97 2.94
2898 3527 5.246203 TGATCCAAATAACCGGAGATCCTAG 59.754 44.000 9.46 0.00 33.97 3.02
2899 3528 3.323979 TCCAAATAACCGGAGATCCTAGC 59.676 47.826 9.46 0.00 0.00 3.42
2900 3529 3.318017 CAAATAACCGGAGATCCTAGCG 58.682 50.000 9.46 0.00 0.00 4.26
2901 3530 0.889306 ATAACCGGAGATCCTAGCGC 59.111 55.000 9.46 0.00 0.00 5.92
2902 3531 1.177256 TAACCGGAGATCCTAGCGCC 61.177 60.000 9.46 0.00 0.00 6.53
2903 3532 4.044484 CCGGAGATCCTAGCGCCG 62.044 72.222 2.29 0.17 46.26 6.46
2905 3534 3.444737 GGAGATCCTAGCGCCGAA 58.555 61.111 2.29 0.00 0.00 4.30
2906 3535 1.007154 GGAGATCCTAGCGCCGAAC 60.007 63.158 2.29 0.00 0.00 3.95
2908 3537 2.354773 GATCCTAGCGCCGAACGG 60.355 66.667 2.29 9.00 43.93 4.44
2909 3538 2.831742 ATCCTAGCGCCGAACGGA 60.832 61.111 17.63 3.21 43.93 4.69
2910 3539 3.135056 ATCCTAGCGCCGAACGGAC 62.135 63.158 17.63 7.92 43.93 4.79
2918 3547 3.186047 CCGAACGGACGGCACATC 61.186 66.667 7.53 0.00 46.20 3.06
2919 3548 3.186047 CGAACGGACGGCACATCC 61.186 66.667 0.00 0.00 37.34 3.51
2928 3557 2.175811 GGCACATCCGCGTTCAAC 59.824 61.111 4.92 0.00 0.00 3.18
2929 3558 2.612567 GGCACATCCGCGTTCAACA 61.613 57.895 4.92 0.00 0.00 3.33
2930 3559 1.440353 GCACATCCGCGTTCAACAC 60.440 57.895 4.92 0.00 0.00 3.32
2931 3560 1.938125 CACATCCGCGTTCAACACA 59.062 52.632 4.92 0.00 0.00 3.72
2932 3561 0.384230 CACATCCGCGTTCAACACAC 60.384 55.000 4.92 0.00 0.00 3.82
2933 3562 1.154672 CATCCGCGTTCAACACACG 60.155 57.895 4.92 0.00 40.75 4.49
2934 3563 1.593209 ATCCGCGTTCAACACACGT 60.593 52.632 4.92 0.00 39.92 4.49
2935 3564 0.318869 ATCCGCGTTCAACACACGTA 60.319 50.000 4.92 0.00 39.92 3.57
2936 3565 1.199859 CCGCGTTCAACACACGTAC 59.800 57.895 4.92 0.00 39.92 3.67
2937 3566 1.155158 CGCGTTCAACACACGTACG 60.155 57.895 15.01 15.01 39.92 3.67
2938 3567 1.199859 GCGTTCAACACACGTACGG 59.800 57.895 21.06 11.05 39.92 4.02
2939 3568 1.481819 GCGTTCAACACACGTACGGT 61.482 55.000 21.06 11.73 39.92 4.83
2940 3569 0.499761 CGTTCAACACACGTACGGTC 59.500 55.000 21.06 1.29 32.80 4.79
2941 3570 1.558741 GTTCAACACACGTACGGTCA 58.441 50.000 21.06 0.00 0.00 4.02
2942 3571 1.519758 GTTCAACACACGTACGGTCAG 59.480 52.381 21.06 8.85 0.00 3.51
2943 3572 0.740149 TCAACACACGTACGGTCAGT 59.260 50.000 21.06 9.50 0.00 3.41
2944 3573 0.850217 CAACACACGTACGGTCAGTG 59.150 55.000 21.06 21.70 41.28 3.66
2947 3576 2.407268 ACACGTACGGTCAGTGTGA 58.593 52.632 21.06 0.00 45.99 3.58
2948 3577 0.029834 ACACGTACGGTCAGTGTGAC 59.970 55.000 21.06 0.00 45.99 3.67
2956 3585 3.777016 GTCAGTGTGACGTCTCCTC 57.223 57.895 17.92 9.13 37.67 3.71
2957 3586 0.241481 GTCAGTGTGACGTCTCCTCC 59.759 60.000 17.92 4.22 37.67 4.30
2958 3587 0.110678 TCAGTGTGACGTCTCCTCCT 59.889 55.000 17.92 6.44 0.00 3.69
2959 3588 0.962489 CAGTGTGACGTCTCCTCCTT 59.038 55.000 17.92 0.00 0.00 3.36
2960 3589 0.962489 AGTGTGACGTCTCCTCCTTG 59.038 55.000 17.92 0.00 0.00 3.61
2961 3590 0.959553 GTGTGACGTCTCCTCCTTGA 59.040 55.000 17.92 0.00 0.00 3.02
2962 3591 1.546476 GTGTGACGTCTCCTCCTTGAT 59.454 52.381 17.92 0.00 0.00 2.57
2963 3592 1.819288 TGTGACGTCTCCTCCTTGATC 59.181 52.381 17.92 0.00 0.00 2.92
2964 3593 1.135333 GTGACGTCTCCTCCTTGATCC 59.865 57.143 17.92 0.00 0.00 3.36
2965 3594 1.272480 TGACGTCTCCTCCTTGATCCA 60.272 52.381 17.92 0.00 0.00 3.41
2966 3595 1.407258 GACGTCTCCTCCTTGATCCAG 59.593 57.143 8.70 0.00 0.00 3.86
2967 3596 0.103937 CGTCTCCTCCTTGATCCAGC 59.896 60.000 0.00 0.00 0.00 4.85
2968 3597 1.198713 GTCTCCTCCTTGATCCAGCA 58.801 55.000 0.00 0.00 0.00 4.41
2969 3598 1.556911 GTCTCCTCCTTGATCCAGCAA 59.443 52.381 0.00 0.00 0.00 3.91
2970 3599 1.836166 TCTCCTCCTTGATCCAGCAAG 59.164 52.381 0.00 0.00 43.74 4.01
2974 3603 4.672251 CTTGATCCAGCAAGGGGG 57.328 61.111 0.00 0.00 41.15 5.40
2975 3604 2.001803 CTTGATCCAGCAAGGGGGA 58.998 57.895 0.00 0.00 41.15 4.81
2976 3605 0.332632 CTTGATCCAGCAAGGGGGAA 59.667 55.000 0.00 0.00 41.15 3.97
2977 3606 0.332632 TTGATCCAGCAAGGGGGAAG 59.667 55.000 0.00 0.00 36.62 3.46
2978 3607 1.228510 GATCCAGCAAGGGGGAAGG 59.771 63.158 0.00 0.00 36.62 3.46
2979 3608 1.230281 ATCCAGCAAGGGGGAAGGA 60.230 57.895 0.00 0.00 36.62 3.36
2980 3609 1.284841 ATCCAGCAAGGGGGAAGGAG 61.285 60.000 0.00 0.00 36.62 3.69
2981 3610 1.925455 CCAGCAAGGGGGAAGGAGA 60.925 63.158 0.00 0.00 0.00 3.71
2982 3611 1.606531 CAGCAAGGGGGAAGGAGAG 59.393 63.158 0.00 0.00 0.00 3.20
2983 3612 1.617839 AGCAAGGGGGAAGGAGAGG 60.618 63.158 0.00 0.00 0.00 3.69
2984 3613 1.925972 GCAAGGGGGAAGGAGAGGT 60.926 63.158 0.00 0.00 0.00 3.85
2985 3614 1.501654 GCAAGGGGGAAGGAGAGGTT 61.502 60.000 0.00 0.00 0.00 3.50
2986 3615 0.329596 CAAGGGGGAAGGAGAGGTTG 59.670 60.000 0.00 0.00 0.00 3.77
2987 3616 0.196118 AAGGGGGAAGGAGAGGTTGA 59.804 55.000 0.00 0.00 0.00 3.18
2988 3617 0.423544 AGGGGGAAGGAGAGGTTGAT 59.576 55.000 0.00 0.00 0.00 2.57
2989 3618 0.548510 GGGGGAAGGAGAGGTTGATG 59.451 60.000 0.00 0.00 0.00 3.07
2990 3619 1.584724 GGGGAAGGAGAGGTTGATGA 58.415 55.000 0.00 0.00 0.00 2.92
2991 3620 1.916181 GGGGAAGGAGAGGTTGATGAA 59.084 52.381 0.00 0.00 0.00 2.57
2992 3621 2.092699 GGGGAAGGAGAGGTTGATGAAG 60.093 54.545 0.00 0.00 0.00 3.02
2993 3622 2.840651 GGGAAGGAGAGGTTGATGAAGA 59.159 50.000 0.00 0.00 0.00 2.87
2994 3623 3.457749 GGGAAGGAGAGGTTGATGAAGAT 59.542 47.826 0.00 0.00 0.00 2.40
2995 3624 4.444164 GGGAAGGAGAGGTTGATGAAGATC 60.444 50.000 0.00 0.00 0.00 2.75
2996 3625 4.444164 GGAAGGAGAGGTTGATGAAGATCC 60.444 50.000 0.00 0.00 0.00 3.36
2997 3626 3.729108 AGGAGAGGTTGATGAAGATCCA 58.271 45.455 0.00 0.00 0.00 3.41
2998 3627 3.710677 AGGAGAGGTTGATGAAGATCCAG 59.289 47.826 0.00 0.00 0.00 3.86
2999 3628 3.465871 GAGAGGTTGATGAAGATCCAGC 58.534 50.000 0.00 0.00 0.00 4.85
3000 3629 2.842496 AGAGGTTGATGAAGATCCAGCA 59.158 45.455 0.00 0.00 0.00 4.41
3001 3630 3.118334 AGAGGTTGATGAAGATCCAGCAG 60.118 47.826 0.00 0.00 33.72 4.24
3002 3631 1.674962 GGTTGATGAAGATCCAGCAGC 59.325 52.381 0.00 0.00 33.72 5.25
3003 3632 2.362736 GTTGATGAAGATCCAGCAGCA 58.637 47.619 0.00 0.00 34.53 4.41
3004 3633 2.034104 TGATGAAGATCCAGCAGCAC 57.966 50.000 0.00 0.00 0.00 4.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 4.796495 GTCATCCCACCCACGGCC 62.796 72.222 0.00 0.00 0.00 6.13
18 19 3.561120 TTGTCATCCCACCCACGGC 62.561 63.158 0.00 0.00 0.00 5.68
19 20 1.377202 CTTGTCATCCCACCCACGG 60.377 63.158 0.00 0.00 0.00 4.94
20 21 1.377202 CCTTGTCATCCCACCCACG 60.377 63.158 0.00 0.00 0.00 4.94
21 22 1.000896 CCCTTGTCATCCCACCCAC 60.001 63.158 0.00 0.00 0.00 4.61
22 23 2.917897 GCCCTTGTCATCCCACCCA 61.918 63.158 0.00 0.00 0.00 4.51
23 24 2.043953 GCCCTTGTCATCCCACCC 60.044 66.667 0.00 0.00 0.00 4.61
24 25 1.077429 GAGCCCTTGTCATCCCACC 60.077 63.158 0.00 0.00 0.00 4.61
25 26 1.450312 CGAGCCCTTGTCATCCCAC 60.450 63.158 0.00 0.00 0.00 4.61
26 27 1.918293 ACGAGCCCTTGTCATCCCA 60.918 57.895 0.00 0.00 0.00 4.37
27 28 1.450312 CACGAGCCCTTGTCATCCC 60.450 63.158 0.00 0.00 0.00 3.85
28 29 1.450312 CCACGAGCCCTTGTCATCC 60.450 63.158 0.00 0.00 0.00 3.51
29 30 1.450312 CCCACGAGCCCTTGTCATC 60.450 63.158 0.00 0.00 0.00 2.92
30 31 2.671070 CCCACGAGCCCTTGTCAT 59.329 61.111 0.00 0.00 0.00 3.06
31 32 3.636231 CCCCACGAGCCCTTGTCA 61.636 66.667 0.00 0.00 0.00 3.58
32 33 4.410400 CCCCCACGAGCCCTTGTC 62.410 72.222 0.00 0.00 0.00 3.18
43 44 4.338710 TACTTGGCGTGCCCCCAC 62.339 66.667 8.69 0.00 38.62 4.61
44 45 4.338710 GTACTTGGCGTGCCCCCA 62.339 66.667 8.69 0.00 34.56 4.96
49 50 4.382320 TCGGGGTACTTGGCGTGC 62.382 66.667 0.00 0.00 0.00 5.34
50 51 2.433664 GTCGGGGTACTTGGCGTG 60.434 66.667 0.00 0.00 0.00 5.34
51 52 4.060038 CGTCGGGGTACTTGGCGT 62.060 66.667 0.00 0.00 0.00 5.68
52 53 4.807039 CCGTCGGGGTACTTGGCG 62.807 72.222 2.34 0.00 0.00 5.69
54 55 4.462280 GGCCGTCGGGGTACTTGG 62.462 72.222 14.38 0.00 38.44 3.61
55 56 3.026431 ATGGCCGTCGGGGTACTTG 62.026 63.158 14.38 0.00 38.44 3.16
56 57 2.686106 ATGGCCGTCGGGGTACTT 60.686 61.111 14.38 0.00 38.44 2.24
57 58 3.467226 CATGGCCGTCGGGGTACT 61.467 66.667 14.38 0.00 38.44 2.73
58 59 4.540735 CCATGGCCGTCGGGGTAC 62.541 72.222 14.38 0.00 38.44 3.34
63 64 4.473520 AGAAGCCATGGCCGTCGG 62.474 66.667 33.14 6.99 43.17 4.79
64 65 3.197790 CAGAAGCCATGGCCGTCG 61.198 66.667 33.14 20.32 43.17 5.12
65 66 2.825836 CCAGAAGCCATGGCCGTC 60.826 66.667 33.14 28.10 43.17 4.79
66 67 3.329889 TCCAGAAGCCATGGCCGT 61.330 61.111 33.14 21.71 43.17 5.68
67 68 2.825836 GTCCAGAAGCCATGGCCG 60.826 66.667 33.14 18.43 43.17 6.13
68 69 2.440980 GGTCCAGAAGCCATGGCC 60.441 66.667 33.14 18.87 43.17 5.36
69 70 1.751927 CAGGTCCAGAAGCCATGGC 60.752 63.158 30.12 30.12 37.76 4.40
70 71 1.077212 CCAGGTCCAGAAGCCATGG 60.077 63.158 7.63 7.63 39.33 3.66
71 72 1.751927 GCCAGGTCCAGAAGCCATG 60.752 63.158 0.00 0.00 0.00 3.66
72 73 2.233566 TGCCAGGTCCAGAAGCCAT 61.234 57.895 0.00 0.00 0.00 4.40
73 74 2.853542 TGCCAGGTCCAGAAGCCA 60.854 61.111 0.00 0.00 0.00 4.75
74 75 2.360475 GTGCCAGGTCCAGAAGCC 60.360 66.667 0.00 0.00 0.00 4.35
75 76 1.673665 CTGTGCCAGGTCCAGAAGC 60.674 63.158 2.16 0.00 0.00 3.86
76 77 1.002868 CCTGTGCCAGGTCCAGAAG 60.003 63.158 11.85 0.00 45.82 2.85
77 78 3.160585 CCTGTGCCAGGTCCAGAA 58.839 61.111 11.85 0.00 45.82 3.02
99 100 4.357947 TCCTCCAGCGCGACACAC 62.358 66.667 12.10 0.00 0.00 3.82
100 101 4.357947 GTCCTCCAGCGCGACACA 62.358 66.667 12.10 0.00 0.00 3.72
134 135 4.803426 CGACGGAGCTGAGGCACC 62.803 72.222 0.00 0.00 44.06 5.01
135 136 3.973267 GACGACGGAGCTGAGGCAC 62.973 68.421 0.00 0.00 41.70 5.01
136 137 3.749064 GACGACGGAGCTGAGGCA 61.749 66.667 0.00 0.00 41.70 4.75
137 138 4.838486 CGACGACGGAGCTGAGGC 62.838 72.222 0.00 0.00 35.79 4.70
147 148 4.831307 CGCTCCTTCCCGACGACG 62.831 72.222 0.00 0.00 39.43 5.12
148 149 4.493747 CCGCTCCTTCCCGACGAC 62.494 72.222 0.00 0.00 0.00 4.34
151 152 3.839432 CTCCCGCTCCTTCCCGAC 61.839 72.222 0.00 0.00 0.00 4.79
152 153 4.056584 TCTCCCGCTCCTTCCCGA 62.057 66.667 0.00 0.00 0.00 5.14
153 154 3.839432 GTCTCCCGCTCCTTCCCG 61.839 72.222 0.00 0.00 0.00 5.14
154 155 3.839432 CGTCTCCCGCTCCTTCCC 61.839 72.222 0.00 0.00 0.00 3.97
155 156 3.839432 CCGTCTCCCGCTCCTTCC 61.839 72.222 0.00 0.00 34.38 3.46
156 157 3.069318 ACCGTCTCCCGCTCCTTC 61.069 66.667 0.00 0.00 34.38 3.46
157 158 3.382832 CACCGTCTCCCGCTCCTT 61.383 66.667 0.00 0.00 34.38 3.36
160 161 3.827898 CTCCACCGTCTCCCGCTC 61.828 72.222 0.00 0.00 34.38 5.03
163 164 3.450115 GTCCTCCACCGTCTCCCG 61.450 72.222 0.00 0.00 0.00 5.14
164 165 3.450115 CGTCCTCCACCGTCTCCC 61.450 72.222 0.00 0.00 0.00 4.30
165 166 4.131088 GCGTCCTCCACCGTCTCC 62.131 72.222 0.00 0.00 0.00 3.71
166 167 4.131088 GGCGTCCTCCACCGTCTC 62.131 72.222 0.00 0.00 0.00 3.36
174 175 4.436998 CTCACCACGGCGTCCTCC 62.437 72.222 10.85 0.00 0.00 4.30
175 176 4.436998 CCTCACCACGGCGTCCTC 62.437 72.222 10.85 0.00 0.00 3.71
177 178 4.309950 AACCTCACCACGGCGTCC 62.310 66.667 10.85 0.00 0.00 4.79
178 179 2.737376 GAACCTCACCACGGCGTC 60.737 66.667 10.85 0.00 0.00 5.19
179 180 4.309950 GGAACCTCACCACGGCGT 62.310 66.667 6.77 6.77 0.00 5.68
182 183 3.246112 TGGGGAACCTCACCACGG 61.246 66.667 0.00 0.00 43.85 4.94
196 197 2.537560 GCTGATCCGCACGAATGGG 61.538 63.158 4.00 0.00 38.49 4.00
197 198 2.874694 CGCTGATCCGCACGAATGG 61.875 63.158 9.90 0.00 0.00 3.16
198 199 1.878069 TCGCTGATCCGCACGAATG 60.878 57.895 9.90 0.00 30.84 2.67
199 200 1.878522 GTCGCTGATCCGCACGAAT 60.879 57.895 9.90 0.00 33.91 3.34
200 201 2.506217 GTCGCTGATCCGCACGAA 60.506 61.111 9.90 0.00 33.91 3.85
201 202 4.829518 CGTCGCTGATCCGCACGA 62.830 66.667 20.66 9.41 36.93 4.35
278 279 3.626996 TTCTGGACCTGGCGCATGG 62.627 63.158 10.83 13.41 0.00 3.66
279 280 2.046023 TTCTGGACCTGGCGCATG 60.046 61.111 10.83 0.00 0.00 4.06
280 281 2.270205 CTTCTGGACCTGGCGCAT 59.730 61.111 10.83 0.00 0.00 4.73
281 282 4.704833 GCTTCTGGACCTGGCGCA 62.705 66.667 10.83 0.00 0.00 6.09
283 284 3.335356 ATGGCTTCTGGACCTGGCG 62.335 63.158 0.00 0.00 0.00 5.69
284 285 1.751927 CATGGCTTCTGGACCTGGC 60.752 63.158 0.00 0.00 0.00 4.85
285 286 1.077212 CCATGGCTTCTGGACCTGG 60.077 63.158 0.00 0.00 35.70 4.45
286 287 1.751927 GCCATGGCTTCTGGACCTG 60.752 63.158 29.98 0.00 35.70 4.00
287 288 2.679716 GCCATGGCTTCTGGACCT 59.320 61.111 29.98 0.00 35.70 3.85
299 300 1.364626 GAGCAACTCGACCAGCCATG 61.365 60.000 0.00 0.00 0.00 3.66
300 301 1.078848 GAGCAACTCGACCAGCCAT 60.079 57.895 0.00 0.00 0.00 4.40
301 302 2.343758 GAGCAACTCGACCAGCCA 59.656 61.111 0.00 0.00 0.00 4.75
310 311 2.507324 GGGCGTCTCGAGCAACTC 60.507 66.667 7.81 0.00 36.08 3.01
311 312 4.421479 CGGGCGTCTCGAGCAACT 62.421 66.667 7.81 0.00 36.08 3.16
329 330 3.958860 AGGACCAGTGTGGCCTGC 61.959 66.667 3.32 0.00 42.67 4.85
330 331 2.033141 CAGGACCAGTGTGGCCTG 59.967 66.667 16.34 16.34 46.96 4.85
331 332 3.252284 CCAGGACCAGTGTGGCCT 61.252 66.667 3.32 0.37 42.67 5.19
332 333 3.553095 GACCAGGACCAGTGTGGCC 62.553 68.421 0.00 0.00 42.67 5.36
333 334 2.032681 GACCAGGACCAGTGTGGC 59.967 66.667 0.00 0.00 42.67 5.01
334 335 1.674057 GAGACCAGGACCAGTGTGG 59.326 63.158 0.00 0.00 45.02 4.17
335 336 1.674057 GGAGACCAGGACCAGTGTG 59.326 63.158 0.00 0.00 0.00 3.82
336 337 1.908793 CGGAGACCAGGACCAGTGT 60.909 63.158 0.00 0.00 0.00 3.55
337 338 2.650116 CCGGAGACCAGGACCAGTG 61.650 68.421 0.00 0.00 0.00 3.66
338 339 2.283966 CCGGAGACCAGGACCAGT 60.284 66.667 0.00 0.00 0.00 4.00
339 340 3.775654 GCCGGAGACCAGGACCAG 61.776 72.222 5.05 0.00 0.00 4.00
342 343 3.358076 CTTCGCCGGAGACCAGGAC 62.358 68.421 7.66 0.00 0.00 3.85
343 344 3.068691 CTTCGCCGGAGACCAGGA 61.069 66.667 7.66 0.00 0.00 3.86
344 345 4.148825 CCTTCGCCGGAGACCAGG 62.149 72.222 7.66 9.68 0.00 4.45
345 346 4.148825 CCCTTCGCCGGAGACCAG 62.149 72.222 7.66 3.31 0.00 4.00
348 349 3.155167 ATCCCCTTCGCCGGAGAC 61.155 66.667 7.66 0.00 0.00 3.36
349 350 3.154473 CATCCCCTTCGCCGGAGA 61.154 66.667 5.05 3.81 0.00 3.71
350 351 4.241555 CCATCCCCTTCGCCGGAG 62.242 72.222 5.05 0.00 0.00 4.63
351 352 4.789173 TCCATCCCCTTCGCCGGA 62.789 66.667 5.05 0.00 0.00 5.14
352 353 4.241555 CTCCATCCCCTTCGCCGG 62.242 72.222 0.00 0.00 0.00 6.13
353 354 3.447025 GACTCCATCCCCTTCGCCG 62.447 68.421 0.00 0.00 0.00 6.46
354 355 2.506472 GACTCCATCCCCTTCGCC 59.494 66.667 0.00 0.00 0.00 5.54
355 356 2.506472 GGACTCCATCCCCTTCGC 59.494 66.667 0.00 0.00 42.46 4.70
363 364 1.812922 CAGCAGCGTGGACTCCATC 60.813 63.158 0.00 0.00 35.28 3.51
364 365 2.267006 CAGCAGCGTGGACTCCAT 59.733 61.111 0.00 0.00 35.28 3.41
365 366 3.226429 GACAGCAGCGTGGACTCCA 62.226 63.158 0.00 0.00 0.00 3.86
366 367 2.433318 GACAGCAGCGTGGACTCC 60.433 66.667 0.00 0.00 0.00 3.85
367 368 2.433318 GGACAGCAGCGTGGACTC 60.433 66.667 0.00 0.00 0.00 3.36
368 369 4.363990 CGGACAGCAGCGTGGACT 62.364 66.667 0.00 0.00 0.00 3.85
369 370 4.664677 ACGGACAGCAGCGTGGAC 62.665 66.667 0.00 0.00 0.00 4.02
370 371 4.662961 CACGGACAGCAGCGTGGA 62.663 66.667 0.00 0.00 30.70 4.02
469 470 0.172578 TTATCCACTCGTCACCGCAG 59.827 55.000 0.00 0.00 0.00 5.18
470 471 0.172578 CTTATCCACTCGTCACCGCA 59.827 55.000 0.00 0.00 0.00 5.69
471 472 0.172803 ACTTATCCACTCGTCACCGC 59.827 55.000 0.00 0.00 0.00 5.68
472 473 1.909376 CACTTATCCACTCGTCACCG 58.091 55.000 0.00 0.00 0.00 4.94
473 474 1.641577 GCACTTATCCACTCGTCACC 58.358 55.000 0.00 0.00 0.00 4.02
474 475 1.269166 CGCACTTATCCACTCGTCAC 58.731 55.000 0.00 0.00 0.00 3.67
475 476 0.885879 ACGCACTTATCCACTCGTCA 59.114 50.000 0.00 0.00 0.00 4.35
476 477 1.269166 CACGCACTTATCCACTCGTC 58.731 55.000 0.00 0.00 0.00 4.20
477 478 0.108804 CCACGCACTTATCCACTCGT 60.109 55.000 0.00 0.00 0.00 4.18
478 479 0.806102 CCCACGCACTTATCCACTCG 60.806 60.000 0.00 0.00 0.00 4.18
479 480 0.249398 ACCCACGCACTTATCCACTC 59.751 55.000 0.00 0.00 0.00 3.51
480 481 0.036388 CACCCACGCACTTATCCACT 60.036 55.000 0.00 0.00 0.00 4.00
481 482 1.024579 CCACCCACGCACTTATCCAC 61.025 60.000 0.00 0.00 0.00 4.02
482 483 1.298340 CCACCCACGCACTTATCCA 59.702 57.895 0.00 0.00 0.00 3.41
483 484 1.451387 CCCACCCACGCACTTATCC 60.451 63.158 0.00 0.00 0.00 2.59
484 485 1.451387 CCCCACCCACGCACTTATC 60.451 63.158 0.00 0.00 0.00 1.75
485 486 2.674754 CCCCACCCACGCACTTAT 59.325 61.111 0.00 0.00 0.00 1.73
486 487 4.338710 GCCCCACCCACGCACTTA 62.339 66.667 0.00 0.00 0.00 2.24
492 493 4.358841 TCATTGGCCCCACCCACG 62.359 66.667 0.00 0.00 37.83 4.94
493 494 2.362889 CTCATTGGCCCCACCCAC 60.363 66.667 0.00 0.00 37.83 4.61
494 495 2.863484 ACTCATTGGCCCCACCCA 60.863 61.111 0.00 0.00 37.83 4.51
495 496 2.362889 CACTCATTGGCCCCACCC 60.363 66.667 0.00 0.00 37.83 4.61
496 497 2.362889 CCACTCATTGGCCCCACC 60.363 66.667 0.00 0.00 39.07 4.61
497 498 1.678970 GTCCACTCATTGGCCCCAC 60.679 63.158 0.00 0.00 46.47 4.61
498 499 1.508667 ATGTCCACTCATTGGCCCCA 61.509 55.000 0.00 0.00 46.47 4.96
499 500 0.324645 AATGTCCACTCATTGGCCCC 60.325 55.000 0.00 0.00 46.47 5.80
500 501 1.560505 AAATGTCCACTCATTGGCCC 58.439 50.000 0.00 0.00 46.47 5.80
501 502 2.827921 AGAAAATGTCCACTCATTGGCC 59.172 45.455 0.00 0.00 46.47 5.36
502 503 3.426695 CGAGAAAATGTCCACTCATTGGC 60.427 47.826 0.00 0.00 46.47 4.52
504 505 5.049474 TGAACGAGAAAATGTCCACTCATTG 60.049 40.000 0.00 0.00 37.96 2.82
505 506 5.049405 GTGAACGAGAAAATGTCCACTCATT 60.049 40.000 0.00 0.00 39.35 2.57
506 507 4.452455 GTGAACGAGAAAATGTCCACTCAT 59.548 41.667 0.00 0.00 0.00 2.90
507 508 3.807622 GTGAACGAGAAAATGTCCACTCA 59.192 43.478 0.00 0.00 0.00 3.41
508 509 3.807622 TGTGAACGAGAAAATGTCCACTC 59.192 43.478 0.00 0.00 0.00 3.51
509 510 3.804036 TGTGAACGAGAAAATGTCCACT 58.196 40.909 0.00 0.00 0.00 4.00
510 511 4.527564 CTTGTGAACGAGAAAATGTCCAC 58.472 43.478 0.00 0.00 0.00 4.02
511 512 3.563808 CCTTGTGAACGAGAAAATGTCCA 59.436 43.478 0.00 0.00 0.00 4.02
512 513 3.813166 TCCTTGTGAACGAGAAAATGTCC 59.187 43.478 0.00 0.00 0.00 4.02
513 514 5.418310 TTCCTTGTGAACGAGAAAATGTC 57.582 39.130 0.00 0.00 0.00 3.06
514 515 5.828299 TTTCCTTGTGAACGAGAAAATGT 57.172 34.783 0.00 0.00 31.05 2.71
535 536 1.374125 GGCTGCCGGCGAAATTTTT 60.374 52.632 23.90 0.00 42.94 1.94
536 537 2.261361 GGCTGCCGGCGAAATTTT 59.739 55.556 23.90 0.00 42.94 1.82
537 538 3.758931 GGGCTGCCGGCGAAATTT 61.759 61.111 23.90 0.00 42.94 1.82
716 723 9.623000 TGGATATGCATGGAATTTATATCTCTG 57.377 33.333 10.16 0.00 33.16 3.35
722 729 9.399797 GAGATGTGGATATGCATGGAATTTATA 57.600 33.333 10.16 0.00 0.00 0.98
749 756 3.563223 AGCTTAGCCGACTACCTTATGA 58.437 45.455 0.00 0.00 0.00 2.15
759 766 6.136743 GCAATTCTTAATTAGCTTAGCCGAC 58.863 40.000 0.00 0.00 0.00 4.79
761 768 5.008613 TGGCAATTCTTAATTAGCTTAGCCG 59.991 40.000 0.00 0.00 39.99 5.52
873 880 6.464222 GGATCGTGATATTGGAATTCAGGTA 58.536 40.000 7.93 0.00 0.00 3.08
956 976 7.605259 CGTCTGAACTCTTAAGATCGAATTTC 58.395 38.462 5.44 3.53 0.00 2.17
1167 1188 4.011517 TTCCCGCGTCCAAGGACC 62.012 66.667 13.35 5.79 41.76 4.46
1629 1653 1.810606 ATCGCTCGGGGCTCATGTAG 61.811 60.000 0.00 0.00 39.13 2.74
1681 1714 3.752339 GTAGGGGTCGACGCGGTT 61.752 66.667 24.17 15.28 37.07 4.44
2001 2035 5.067413 TGAGAACGGACAGTCCAATATCTAC 59.933 44.000 20.13 10.33 35.91 2.59
2010 2044 2.135933 CAGTTTGAGAACGGACAGTCC 58.864 52.381 9.92 9.92 40.75 3.85
2011 2045 2.822764 ACAGTTTGAGAACGGACAGTC 58.177 47.619 0.00 0.00 40.75 3.51
2023 2057 4.142071 TGCAAATGTTTGGCTACAGTTTGA 60.142 37.500 19.18 5.52 34.44 2.69
2099 2133 9.138596 ACCAAAACTGTTGTACCATATTAAACT 57.861 29.630 0.00 0.00 0.00 2.66
2100 2134 9.187455 CACCAAAACTGTTGTACCATATTAAAC 57.813 33.333 0.00 0.00 0.00 2.01
2101 2135 8.915036 ACACCAAAACTGTTGTACCATATTAAA 58.085 29.630 0.00 0.00 0.00 1.52
2102 2136 8.466617 ACACCAAAACTGTTGTACCATATTAA 57.533 30.769 0.00 0.00 0.00 1.40
2103 2137 7.940137 AGACACCAAAACTGTTGTACCATATTA 59.060 33.333 0.00 0.00 0.00 0.98
2104 2138 6.775629 AGACACCAAAACTGTTGTACCATATT 59.224 34.615 0.00 0.00 0.00 1.28
2105 2139 6.303839 AGACACCAAAACTGTTGTACCATAT 58.696 36.000 0.00 0.00 0.00 1.78
2106 2140 5.686753 AGACACCAAAACTGTTGTACCATA 58.313 37.500 0.00 0.00 0.00 2.74
2107 2141 4.532834 AGACACCAAAACTGTTGTACCAT 58.467 39.130 0.00 0.00 0.00 3.55
2108 2142 3.958018 AGACACCAAAACTGTTGTACCA 58.042 40.909 0.00 0.00 0.00 3.25
2109 2143 5.180680 GGATAGACACCAAAACTGTTGTACC 59.819 44.000 0.00 0.00 0.00 3.34
2110 2144 5.107220 CGGATAGACACCAAAACTGTTGTAC 60.107 44.000 0.00 0.00 0.00 2.90
2111 2145 4.992319 CGGATAGACACCAAAACTGTTGTA 59.008 41.667 0.00 0.00 0.00 2.41
2112 2146 3.813166 CGGATAGACACCAAAACTGTTGT 59.187 43.478 0.00 0.00 0.00 3.32
2113 2147 3.813166 ACGGATAGACACCAAAACTGTTG 59.187 43.478 0.00 0.00 0.00 3.33
2178 2219 0.175073 GACGTTCCCTGGTTAGCGAT 59.825 55.000 9.00 0.00 0.00 4.58
2199 2240 5.127845 TGTTCACTGGGATTGCTTACAAAAA 59.872 36.000 0.00 0.00 39.77 1.94
2204 2245 3.412386 AGTGTTCACTGGGATTGCTTAC 58.588 45.455 4.58 0.00 0.00 2.34
2205 2246 3.327757 AGAGTGTTCACTGGGATTGCTTA 59.672 43.478 10.29 0.00 0.00 3.09
2220 2261 5.793030 ACTAGACTTGCTGTAAGAGTGTT 57.207 39.130 12.54 0.00 39.76 3.32
2223 2264 5.355910 GCTCTACTAGACTTGCTGTAAGAGT 59.644 44.000 12.54 7.83 39.76 3.24
2230 2271 2.360801 GAGGGCTCTACTAGACTTGCTG 59.639 54.545 0.00 0.00 31.67 4.41
2249 2290 1.272807 TAGGGGTTTGAGGGTTCGAG 58.727 55.000 0.00 0.00 0.00 4.04
2252 2293 6.921486 TTATTTTTAGGGGTTTGAGGGTTC 57.079 37.500 0.00 0.00 0.00 3.62
2276 2317 4.273969 TCGACGAAAACTGTAAAAAGGCAT 59.726 37.500 0.00 0.00 0.00 4.40
2279 2320 7.495339 TTTTTCGACGAAAACTGTAAAAAGG 57.505 32.000 29.90 0.00 40.56 3.11
2306 2348 6.818142 AGAGTTTAGAGGTTCTAGTCTACGAC 59.182 42.308 0.00 0.00 29.56 4.34
2307 2349 6.945218 AGAGTTTAGAGGTTCTAGTCTACGA 58.055 40.000 0.00 0.00 29.56 3.43
2355 2397 2.623416 GGAAACAGTTTGAGGGTTGGAG 59.377 50.000 2.34 0.00 0.00 3.86
2366 2408 4.513406 TCTACAGGTTGGGAAACAGTTT 57.487 40.909 0.00 0.00 0.00 2.66
2377 2419 3.403038 CAACCCTCACTTCTACAGGTTG 58.597 50.000 5.42 5.42 45.76 3.77
2408 2450 4.280019 GTGCGGGTTGGGGGAAGT 62.280 66.667 0.00 0.00 0.00 3.01
2410 2452 3.961414 GAGTGCGGGTTGGGGGAA 61.961 66.667 0.00 0.00 0.00 3.97
2411 2453 4.974438 AGAGTGCGGGTTGGGGGA 62.974 66.667 0.00 0.00 0.00 4.81
2437 2482 3.125573 GAAACTTCCCTCCCGCGC 61.126 66.667 0.00 0.00 0.00 6.86
2573 3202 3.500642 GGCTTCTTCCGCGGCTTC 61.501 66.667 23.51 5.68 0.00 3.86
2638 3267 2.107141 GAGGAGGTTCGGCGATGG 59.893 66.667 11.76 0.00 0.00 3.51
2640 3269 3.155167 GGGAGGAGGTTCGGCGAT 61.155 66.667 11.76 0.00 0.00 4.58
2658 3287 3.712881 GAACACCTCGTGCACGGC 61.713 66.667 36.41 14.75 36.98 5.68
2716 3345 0.394488 TTCTGCAACGTTCCCCAACA 60.394 50.000 0.00 0.00 32.14 3.33
2717 3346 0.741915 TTTCTGCAACGTTCCCCAAC 59.258 50.000 0.00 0.00 0.00 3.77
2718 3347 1.135333 GTTTTCTGCAACGTTCCCCAA 59.865 47.619 0.00 0.00 0.00 4.12
2719 3348 0.741915 GTTTTCTGCAACGTTCCCCA 59.258 50.000 0.00 0.00 0.00 4.96
2720 3349 0.741915 TGTTTTCTGCAACGTTCCCC 59.258 50.000 0.00 0.00 0.00 4.81
2721 3350 2.570442 TTGTTTTCTGCAACGTTCCC 57.430 45.000 0.00 0.00 0.00 3.97
2722 3351 4.912528 TTTTTGTTTTCTGCAACGTTCC 57.087 36.364 0.00 0.00 0.00 3.62
2754 3383 7.856145 ACTCATAGATTGATCTTGGTGAAAC 57.144 36.000 0.00 0.00 38.32 2.78
2755 3384 8.102676 TGAACTCATAGATTGATCTTGGTGAAA 58.897 33.333 0.00 0.00 38.32 2.69
2756 3385 7.623630 TGAACTCATAGATTGATCTTGGTGAA 58.376 34.615 0.00 0.00 38.32 3.18
2757 3386 7.186570 TGAACTCATAGATTGATCTTGGTGA 57.813 36.000 0.00 2.11 38.32 4.02
2758 3387 7.932491 AGATGAACTCATAGATTGATCTTGGTG 59.068 37.037 0.00 0.00 38.32 4.17
2759 3388 8.032045 AGATGAACTCATAGATTGATCTTGGT 57.968 34.615 0.00 0.00 38.32 3.67
2760 3389 9.642327 CTAGATGAACTCATAGATTGATCTTGG 57.358 37.037 0.00 0.00 38.32 3.61
2761 3390 9.142515 GCTAGATGAACTCATAGATTGATCTTG 57.857 37.037 0.00 0.00 38.32 3.02
2762 3391 8.868103 TGCTAGATGAACTCATAGATTGATCTT 58.132 33.333 0.00 0.00 38.32 2.40
2763 3392 8.419922 TGCTAGATGAACTCATAGATTGATCT 57.580 34.615 0.00 0.00 40.86 2.75
2764 3393 8.924691 GTTGCTAGATGAACTCATAGATTGATC 58.075 37.037 0.00 0.00 36.57 2.92
2765 3394 7.598118 CGTTGCTAGATGAACTCATAGATTGAT 59.402 37.037 0.00 0.00 36.57 2.57
2766 3395 6.920210 CGTTGCTAGATGAACTCATAGATTGA 59.080 38.462 0.00 0.00 36.57 2.57
2767 3396 6.920210 TCGTTGCTAGATGAACTCATAGATTG 59.080 38.462 0.00 0.00 36.57 2.67
2768 3397 7.013750 TCTCGTTGCTAGATGAACTCATAGATT 59.986 37.037 0.00 0.00 36.57 2.40
2769 3398 6.488344 TCTCGTTGCTAGATGAACTCATAGAT 59.512 38.462 0.00 0.00 36.57 1.98
2770 3399 5.823045 TCTCGTTGCTAGATGAACTCATAGA 59.177 40.000 0.00 0.00 36.57 1.98
2771 3400 6.066054 TCTCGTTGCTAGATGAACTCATAG 57.934 41.667 0.00 0.00 36.57 2.23
2772 3401 6.451064 TTCTCGTTGCTAGATGAACTCATA 57.549 37.500 0.00 0.00 36.57 2.15
2773 3402 4.991153 TCTCGTTGCTAGATGAACTCAT 57.009 40.909 0.00 0.00 39.70 2.90
2774 3403 4.783764 TTCTCGTTGCTAGATGAACTCA 57.216 40.909 0.00 0.00 0.00 3.41
2775 3404 5.403246 TCTTTCTCGTTGCTAGATGAACTC 58.597 41.667 0.00 0.00 0.00 3.01
2776 3405 5.392767 TCTTTCTCGTTGCTAGATGAACT 57.607 39.130 0.00 0.00 0.00 3.01
2777 3406 4.564769 CCTCTTTCTCGTTGCTAGATGAAC 59.435 45.833 0.00 0.00 0.00 3.18
2778 3407 4.462834 TCCTCTTTCTCGTTGCTAGATGAA 59.537 41.667 0.00 0.00 0.00 2.57
2779 3408 4.017126 TCCTCTTTCTCGTTGCTAGATGA 58.983 43.478 0.00 0.00 0.00 2.92
2780 3409 4.142271 ACTCCTCTTTCTCGTTGCTAGATG 60.142 45.833 0.00 0.00 0.00 2.90
2781 3410 4.020543 ACTCCTCTTTCTCGTTGCTAGAT 58.979 43.478 0.00 0.00 0.00 1.98
2782 3411 3.191581 CACTCCTCTTTCTCGTTGCTAGA 59.808 47.826 0.00 0.00 0.00 2.43
2783 3412 3.506810 CACTCCTCTTTCTCGTTGCTAG 58.493 50.000 0.00 0.00 0.00 3.42
2784 3413 2.352814 GCACTCCTCTTTCTCGTTGCTA 60.353 50.000 0.00 0.00 0.00 3.49
2785 3414 1.606737 GCACTCCTCTTTCTCGTTGCT 60.607 52.381 0.00 0.00 0.00 3.91
2786 3415 0.793250 GCACTCCTCTTTCTCGTTGC 59.207 55.000 0.00 0.00 0.00 4.17
2787 3416 2.064762 CTGCACTCCTCTTTCTCGTTG 58.935 52.381 0.00 0.00 0.00 4.10
2788 3417 1.606737 GCTGCACTCCTCTTTCTCGTT 60.607 52.381 0.00 0.00 0.00 3.85
2789 3418 0.037790 GCTGCACTCCTCTTTCTCGT 60.038 55.000 0.00 0.00 0.00 4.18
2790 3419 0.246086 AGCTGCACTCCTCTTTCTCG 59.754 55.000 1.02 0.00 0.00 4.04
2791 3420 2.232452 TGTAGCTGCACTCCTCTTTCTC 59.768 50.000 0.00 0.00 0.00 2.87
2792 3421 2.251818 TGTAGCTGCACTCCTCTTTCT 58.748 47.619 0.00 0.00 0.00 2.52
2793 3422 2.751166 TGTAGCTGCACTCCTCTTTC 57.249 50.000 0.00 0.00 0.00 2.62
2794 3423 3.118592 GGTATGTAGCTGCACTCCTCTTT 60.119 47.826 6.66 0.00 0.00 2.52
2795 3424 2.432510 GGTATGTAGCTGCACTCCTCTT 59.567 50.000 6.66 0.00 0.00 2.85
2796 3425 2.035632 GGTATGTAGCTGCACTCCTCT 58.964 52.381 6.66 0.00 0.00 3.69
2797 3426 1.069358 GGGTATGTAGCTGCACTCCTC 59.931 57.143 20.25 11.07 0.00 3.71
2798 3427 1.123928 GGGTATGTAGCTGCACTCCT 58.876 55.000 20.25 4.38 0.00 3.69
2799 3428 1.123928 AGGGTATGTAGCTGCACTCC 58.876 55.000 6.66 12.22 0.00 3.85
2800 3429 2.093447 ACAAGGGTATGTAGCTGCACTC 60.093 50.000 6.66 3.01 0.00 3.51
2801 3430 1.909302 ACAAGGGTATGTAGCTGCACT 59.091 47.619 6.66 0.00 0.00 4.40
2802 3431 2.403252 ACAAGGGTATGTAGCTGCAC 57.597 50.000 6.66 0.00 0.00 4.57
2803 3432 3.819564 CTACAAGGGTATGTAGCTGCA 57.180 47.619 7.05 7.05 44.39 4.41
2809 3438 3.501062 CGCTCGATCTACAAGGGTATGTA 59.499 47.826 0.00 0.00 34.75 2.29
2810 3439 2.293677 CGCTCGATCTACAAGGGTATGT 59.706 50.000 0.00 0.00 37.32 2.29
2811 3440 2.351835 CCGCTCGATCTACAAGGGTATG 60.352 54.545 0.00 0.00 0.00 2.39
2812 3441 1.887198 CCGCTCGATCTACAAGGGTAT 59.113 52.381 0.00 0.00 0.00 2.73
2813 3442 1.134007 TCCGCTCGATCTACAAGGGTA 60.134 52.381 0.00 0.00 0.00 3.69
2814 3443 0.395311 TCCGCTCGATCTACAAGGGT 60.395 55.000 0.00 0.00 0.00 4.34
2815 3444 0.744874 TTCCGCTCGATCTACAAGGG 59.255 55.000 0.00 0.00 0.00 3.95
2816 3445 1.866063 GCTTCCGCTCGATCTACAAGG 60.866 57.143 0.00 0.00 0.00 3.61
2817 3446 1.482278 GCTTCCGCTCGATCTACAAG 58.518 55.000 0.00 0.00 0.00 3.16
2818 3447 0.248498 CGCTTCCGCTCGATCTACAA 60.248 55.000 0.00 0.00 0.00 2.41
2819 3448 1.355563 CGCTTCCGCTCGATCTACA 59.644 57.895 0.00 0.00 0.00 2.74
2820 3449 0.248539 AACGCTTCCGCTCGATCTAC 60.249 55.000 0.00 0.00 38.22 2.59
2821 3450 0.029035 GAACGCTTCCGCTCGATCTA 59.971 55.000 0.00 0.00 38.22 1.98
2822 3451 1.226717 GAACGCTTCCGCTCGATCT 60.227 57.895 0.00 0.00 38.22 2.75
2823 3452 1.076533 TTGAACGCTTCCGCTCGATC 61.077 55.000 0.00 0.00 38.22 3.69
2824 3453 1.078759 CTTGAACGCTTCCGCTCGAT 61.079 55.000 0.00 0.00 38.22 3.59
2825 3454 1.733041 CTTGAACGCTTCCGCTCGA 60.733 57.895 0.00 0.00 38.22 4.04
2826 3455 1.678269 CTCTTGAACGCTTCCGCTCG 61.678 60.000 0.00 0.00 38.22 5.03
2827 3456 0.388649 TCTCTTGAACGCTTCCGCTC 60.389 55.000 0.00 0.00 38.22 5.03
2828 3457 0.033504 TTCTCTTGAACGCTTCCGCT 59.966 50.000 0.00 0.00 38.22 5.52
2829 3458 0.164002 GTTCTCTTGAACGCTTCCGC 59.836 55.000 0.00 0.00 42.39 5.54
2837 3466 2.143925 CTCAACCCCGTTCTCTTGAAC 58.856 52.381 0.00 0.00 46.59 3.18
2838 3467 1.071699 CCTCAACCCCGTTCTCTTGAA 59.928 52.381 0.00 0.00 0.00 2.69
2839 3468 0.685097 CCTCAACCCCGTTCTCTTGA 59.315 55.000 0.00 0.00 0.00 3.02
2840 3469 0.321653 CCCTCAACCCCGTTCTCTTG 60.322 60.000 0.00 0.00 0.00 3.02
2841 3470 0.473117 TCCCTCAACCCCGTTCTCTT 60.473 55.000 0.00 0.00 0.00 2.85
2842 3471 0.905337 CTCCCTCAACCCCGTTCTCT 60.905 60.000 0.00 0.00 0.00 3.10
2843 3472 1.192803 ACTCCCTCAACCCCGTTCTC 61.193 60.000 0.00 0.00 0.00 2.87
2844 3473 1.152096 ACTCCCTCAACCCCGTTCT 60.152 57.895 0.00 0.00 0.00 3.01
2845 3474 1.295746 GACTCCCTCAACCCCGTTC 59.704 63.158 0.00 0.00 0.00 3.95
2846 3475 2.580601 CGACTCCCTCAACCCCGTT 61.581 63.158 0.00 0.00 0.00 4.44
2847 3476 2.430704 TACGACTCCCTCAACCCCGT 62.431 60.000 0.00 0.00 0.00 5.28
2848 3477 1.679977 TACGACTCCCTCAACCCCG 60.680 63.158 0.00 0.00 0.00 5.73
2849 3478 0.614134 AGTACGACTCCCTCAACCCC 60.614 60.000 0.00 0.00 0.00 4.95
2850 3479 0.816373 GAGTACGACTCCCTCAACCC 59.184 60.000 0.00 0.00 39.28 4.11
2851 3480 0.450983 CGAGTACGACTCCCTCAACC 59.549 60.000 8.73 0.00 42.12 3.77
2852 3481 1.130186 GACGAGTACGACTCCCTCAAC 59.870 57.143 8.73 0.00 42.12 3.18
2853 3482 1.446907 GACGAGTACGACTCCCTCAA 58.553 55.000 8.73 0.00 42.12 3.02
2854 3483 0.738762 CGACGAGTACGACTCCCTCA 60.739 60.000 8.73 0.00 42.12 3.86
2855 3484 0.739112 ACGACGAGTACGACTCCCTC 60.739 60.000 0.00 4.40 42.12 4.30
2856 3485 1.018226 CACGACGAGTACGACTCCCT 61.018 60.000 0.00 0.00 42.12 4.20
2857 3486 1.016130 TCACGACGAGTACGACTCCC 61.016 60.000 0.00 2.50 42.12 4.30
2858 3487 1.005137 GATCACGACGAGTACGACTCC 60.005 57.143 0.00 0.00 42.12 3.85
2859 3488 1.005137 GGATCACGACGAGTACGACTC 60.005 57.143 0.00 0.00 41.71 3.36
2860 3489 1.005340 GGATCACGACGAGTACGACT 58.995 55.000 0.00 0.00 42.66 4.18
2861 3490 0.723414 TGGATCACGACGAGTACGAC 59.277 55.000 0.00 0.00 42.66 4.34
2862 3491 1.441738 TTGGATCACGACGAGTACGA 58.558 50.000 0.00 0.00 42.66 3.43
2863 3492 2.251869 TTTGGATCACGACGAGTACG 57.748 50.000 0.00 0.00 45.75 3.67
2864 3493 4.501921 GGTTATTTGGATCACGACGAGTAC 59.498 45.833 0.00 0.00 0.00 2.73
2865 3494 4.675510 GGTTATTTGGATCACGACGAGTA 58.324 43.478 0.00 0.00 0.00 2.59
2866 3495 3.518590 GGTTATTTGGATCACGACGAGT 58.481 45.455 0.00 0.00 0.00 4.18
2867 3496 2.534349 CGGTTATTTGGATCACGACGAG 59.466 50.000 0.00 0.00 0.00 4.18
2868 3497 2.532235 CGGTTATTTGGATCACGACGA 58.468 47.619 0.00 0.00 0.00 4.20
2869 3498 1.591158 CCGGTTATTTGGATCACGACG 59.409 52.381 0.00 0.00 0.00 5.12
2870 3499 2.864343 CTCCGGTTATTTGGATCACGAC 59.136 50.000 0.00 0.00 32.83 4.34
2871 3500 2.761767 TCTCCGGTTATTTGGATCACGA 59.238 45.455 0.00 0.00 32.83 4.35
2872 3501 3.173668 TCTCCGGTTATTTGGATCACG 57.826 47.619 0.00 0.00 32.83 4.35
2873 3502 4.065789 GGATCTCCGGTTATTTGGATCAC 58.934 47.826 0.00 0.00 32.83 3.06
2874 3503 3.973973 AGGATCTCCGGTTATTTGGATCA 59.026 43.478 0.00 0.00 42.08 2.92
2875 3504 4.625607 AGGATCTCCGGTTATTTGGATC 57.374 45.455 0.00 4.92 42.08 3.36
2876 3505 4.020128 GCTAGGATCTCCGGTTATTTGGAT 60.020 45.833 0.00 0.00 42.08 3.41
2877 3506 3.323979 GCTAGGATCTCCGGTTATTTGGA 59.676 47.826 0.00 0.00 42.08 3.53
2878 3507 3.665190 GCTAGGATCTCCGGTTATTTGG 58.335 50.000 0.00 0.00 42.08 3.28
2879 3508 3.318017 CGCTAGGATCTCCGGTTATTTG 58.682 50.000 0.00 0.00 42.08 2.32
2880 3509 2.288886 GCGCTAGGATCTCCGGTTATTT 60.289 50.000 0.00 0.00 42.08 1.40
2881 3510 1.272769 GCGCTAGGATCTCCGGTTATT 59.727 52.381 0.00 0.00 42.08 1.40
2882 3511 0.889306 GCGCTAGGATCTCCGGTTAT 59.111 55.000 0.00 0.00 42.08 1.89
2883 3512 1.177256 GGCGCTAGGATCTCCGGTTA 61.177 60.000 7.64 0.00 42.08 2.85
2884 3513 2.499827 GGCGCTAGGATCTCCGGTT 61.500 63.158 7.64 0.00 42.08 4.44
2885 3514 2.913060 GGCGCTAGGATCTCCGGT 60.913 66.667 7.64 0.00 42.08 5.28
2886 3515 4.044484 CGGCGCTAGGATCTCCGG 62.044 72.222 7.64 0.00 42.08 5.14
2887 3516 2.552819 TTCGGCGCTAGGATCTCCG 61.553 63.158 7.64 0.00 42.08 4.63
2888 3517 1.007154 GTTCGGCGCTAGGATCTCC 60.007 63.158 7.64 0.00 0.00 3.71
2889 3518 1.370657 CGTTCGGCGCTAGGATCTC 60.371 63.158 7.64 0.00 0.00 2.75
2890 3519 2.722487 CGTTCGGCGCTAGGATCT 59.278 61.111 7.64 0.00 0.00 2.75
2891 3520 2.354773 CCGTTCGGCGCTAGGATC 60.355 66.667 7.64 1.16 39.71 3.36
2892 3521 2.831742 TCCGTTCGGCGCTAGGAT 60.832 61.111 7.64 0.00 39.71 3.24
2893 3522 3.818787 GTCCGTTCGGCGCTAGGA 61.819 66.667 7.64 7.54 39.71 2.94
2902 3531 3.186047 GGATGTGCCGTCCGTTCG 61.186 66.667 0.00 0.00 29.33 3.95
2911 3540 2.175811 GTTGAACGCGGATGTGCC 59.824 61.111 12.47 0.00 0.00 5.01
2912 3541 1.440353 GTGTTGAACGCGGATGTGC 60.440 57.895 12.47 0.00 0.00 4.57
2913 3542 0.384230 GTGTGTTGAACGCGGATGTG 60.384 55.000 12.47 0.00 0.00 3.21
2914 3543 1.938861 GTGTGTTGAACGCGGATGT 59.061 52.632 12.47 0.00 0.00 3.06
2915 3544 4.818417 GTGTGTTGAACGCGGATG 57.182 55.556 12.47 0.00 0.00 3.51
2920 3549 1.199859 CCGTACGTGTGTTGAACGC 59.800 57.895 15.21 1.20 44.80 4.84
2921 3550 0.499761 GACCGTACGTGTGTTGAACG 59.500 55.000 15.21 0.00 46.32 3.95
2922 3551 1.519758 CTGACCGTACGTGTGTTGAAC 59.480 52.381 15.21 0.00 0.00 3.18
2923 3552 1.134753 ACTGACCGTACGTGTGTTGAA 59.865 47.619 15.21 0.00 0.00 2.69
2924 3553 0.740149 ACTGACCGTACGTGTGTTGA 59.260 50.000 15.21 0.00 0.00 3.18
2925 3554 0.850217 CACTGACCGTACGTGTGTTG 59.150 55.000 15.21 1.87 0.00 3.33
2926 3555 0.457035 ACACTGACCGTACGTGTGTT 59.543 50.000 19.99 10.20 40.11 3.32
2927 3556 2.109431 ACACTGACCGTACGTGTGT 58.891 52.632 19.99 19.99 40.11 3.72
2929 3558 0.029834 GTCACACTGACCGTACGTGT 59.970 55.000 15.21 11.67 41.37 4.49
2930 3559 0.995234 CGTCACACTGACCGTACGTG 60.995 60.000 15.21 7.89 44.20 4.49
2931 3560 1.280746 CGTCACACTGACCGTACGT 59.719 57.895 15.21 2.02 44.20 3.57
2932 3561 0.723790 GACGTCACACTGACCGTACG 60.724 60.000 11.55 8.69 44.20 3.67
2933 3562 0.590195 AGACGTCACACTGACCGTAC 59.410 55.000 19.50 0.00 44.20 3.67
2934 3563 0.870393 GAGACGTCACACTGACCGTA 59.130 55.000 19.50 0.00 44.20 4.02
2935 3564 1.653115 GAGACGTCACACTGACCGT 59.347 57.895 19.50 0.00 44.20 4.83
2936 3565 1.081376 GGAGACGTCACACTGACCG 60.081 63.158 19.50 0.00 44.20 4.79
2937 3566 0.241481 GAGGAGACGTCACACTGACC 59.759 60.000 19.50 8.81 44.20 4.02
2938 3567 0.241481 GGAGGAGACGTCACACTGAC 59.759 60.000 19.50 4.36 43.65 3.51
2939 3568 0.110678 AGGAGGAGACGTCACACTGA 59.889 55.000 19.50 0.00 0.00 3.41
2940 3569 0.962489 AAGGAGGAGACGTCACACTG 59.038 55.000 19.50 0.00 0.00 3.66
2941 3570 0.962489 CAAGGAGGAGACGTCACACT 59.038 55.000 19.50 12.23 0.00 3.55
2942 3571 0.959553 TCAAGGAGGAGACGTCACAC 59.040 55.000 19.50 8.64 0.00 3.82
2943 3572 1.819288 GATCAAGGAGGAGACGTCACA 59.181 52.381 19.50 0.00 0.00 3.58
2944 3573 1.135333 GGATCAAGGAGGAGACGTCAC 59.865 57.143 19.50 11.89 0.00 3.67
2945 3574 1.272480 TGGATCAAGGAGGAGACGTCA 60.272 52.381 19.50 0.00 0.00 4.35
2946 3575 1.407258 CTGGATCAAGGAGGAGACGTC 59.593 57.143 7.70 7.70 0.00 4.34
2947 3576 1.479709 CTGGATCAAGGAGGAGACGT 58.520 55.000 0.00 0.00 0.00 4.34
2948 3577 0.103937 GCTGGATCAAGGAGGAGACG 59.896 60.000 0.00 0.00 0.00 4.18
2949 3578 1.198713 TGCTGGATCAAGGAGGAGAC 58.801 55.000 0.00 0.00 0.00 3.36
2950 3579 1.836166 CTTGCTGGATCAAGGAGGAGA 59.164 52.381 0.00 0.00 39.68 3.71
2951 3580 2.328819 CTTGCTGGATCAAGGAGGAG 57.671 55.000 0.00 0.00 39.68 3.69
2957 3586 0.332632 TTCCCCCTTGCTGGATCAAG 59.667 55.000 0.00 0.00 42.23 3.02
2958 3587 0.332632 CTTCCCCCTTGCTGGATCAA 59.667 55.000 0.00 0.00 38.35 2.57
2959 3588 1.574526 CCTTCCCCCTTGCTGGATCA 61.575 60.000 0.00 0.00 38.35 2.92
2960 3589 1.228510 CCTTCCCCCTTGCTGGATC 59.771 63.158 0.00 0.00 38.35 3.36
2961 3590 1.230281 TCCTTCCCCCTTGCTGGAT 60.230 57.895 0.00 0.00 38.35 3.41
2962 3591 1.925455 CTCCTTCCCCCTTGCTGGA 60.925 63.158 0.00 0.00 38.35 3.86
2963 3592 1.919600 CTCTCCTTCCCCCTTGCTGG 61.920 65.000 0.00 0.00 0.00 4.85
2964 3593 1.606531 CTCTCCTTCCCCCTTGCTG 59.393 63.158 0.00 0.00 0.00 4.41
2965 3594 1.617839 CCTCTCCTTCCCCCTTGCT 60.618 63.158 0.00 0.00 0.00 3.91
2966 3595 1.501654 AACCTCTCCTTCCCCCTTGC 61.502 60.000 0.00 0.00 0.00 4.01
2967 3596 0.329596 CAACCTCTCCTTCCCCCTTG 59.670 60.000 0.00 0.00 0.00 3.61
2968 3597 0.196118 TCAACCTCTCCTTCCCCCTT 59.804 55.000 0.00 0.00 0.00 3.95
2969 3598 0.423544 ATCAACCTCTCCTTCCCCCT 59.576 55.000 0.00 0.00 0.00 4.79
2970 3599 0.548510 CATCAACCTCTCCTTCCCCC 59.451 60.000 0.00 0.00 0.00 5.40
2971 3600 1.584724 TCATCAACCTCTCCTTCCCC 58.415 55.000 0.00 0.00 0.00 4.81
2972 3601 2.840651 TCTTCATCAACCTCTCCTTCCC 59.159 50.000 0.00 0.00 0.00 3.97
2973 3602 4.444164 GGATCTTCATCAACCTCTCCTTCC 60.444 50.000 0.00 0.00 0.00 3.46
2974 3603 4.163078 TGGATCTTCATCAACCTCTCCTTC 59.837 45.833 0.00 0.00 0.00 3.46
2975 3604 4.107072 TGGATCTTCATCAACCTCTCCTT 58.893 43.478 0.00 0.00 0.00 3.36
2976 3605 3.710677 CTGGATCTTCATCAACCTCTCCT 59.289 47.826 0.00 0.00 0.00 3.69
2977 3606 3.743899 GCTGGATCTTCATCAACCTCTCC 60.744 52.174 0.00 0.00 0.00 3.71
2978 3607 3.118482 TGCTGGATCTTCATCAACCTCTC 60.118 47.826 0.00 0.00 0.00 3.20
2979 3608 2.842496 TGCTGGATCTTCATCAACCTCT 59.158 45.455 0.00 0.00 0.00 3.69
2980 3609 3.204526 CTGCTGGATCTTCATCAACCTC 58.795 50.000 0.00 0.00 0.00 3.85
2981 3610 2.683152 GCTGCTGGATCTTCATCAACCT 60.683 50.000 0.00 0.00 0.00 3.50
2982 3611 1.674962 GCTGCTGGATCTTCATCAACC 59.325 52.381 0.00 0.00 0.00 3.77
2983 3612 2.097142 GTGCTGCTGGATCTTCATCAAC 59.903 50.000 0.00 0.00 0.00 3.18
2984 3613 2.362736 GTGCTGCTGGATCTTCATCAA 58.637 47.619 0.00 0.00 0.00 2.57
2985 3614 2.034104 GTGCTGCTGGATCTTCATCA 57.966 50.000 0.00 0.00 0.00 3.07


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.