Multiple sequence alignment - TraesCS4B01G046500

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G046500 chr4B 100.000 3227 0 0 1 3227 33621106 33624332 0.000000e+00 5960.0
1 TraesCS4B01G046500 chr4B 91.878 394 23 2 1950 2339 299459293 299459681 2.830000e-150 542.0
2 TraesCS4B01G046500 chr4B 93.333 255 17 0 1577 1831 299459027 299459281 8.450000e-101 377.0
3 TraesCS4B01G046500 chr4B 96.154 130 3 2 1817 1945 653049550 653049678 9.070000e-51 211.0
4 TraesCS4B01G046500 chr4B 98.810 84 1 0 477 560 33621336 33621419 2.010000e-32 150.0
5 TraesCS4B01G046500 chr4B 98.810 84 1 0 231 314 33621582 33621665 2.010000e-32 150.0
6 TraesCS4B01G046500 chr4D 87.673 722 54 13 1130 1831 21152087 21151381 0.000000e+00 808.0
7 TraesCS4B01G046500 chr4D 89.623 636 55 4 1954 2582 21151377 21150746 0.000000e+00 798.0
8 TraesCS4B01G046500 chr4D 91.429 350 9 6 783 1125 21152466 21152131 8.160000e-126 460.0
9 TraesCS4B01G046500 chr4D 85.714 280 10 7 2950 3227 21150301 21150050 5.310000e-68 268.0
10 TraesCS4B01G046500 chr4D 92.090 177 13 1 532 708 21152794 21152619 6.910000e-62 248.0
11 TraesCS4B01G046500 chr4D 86.239 109 11 2 351 459 21165937 21165833 7.320000e-22 115.0
12 TraesCS4B01G046500 chr4D 91.463 82 6 1 458 539 21165664 21165584 9.460000e-21 111.0
13 TraesCS4B01G046500 chr4D 89.873 79 4 1 2797 2875 21150472 21150398 7.370000e-17 99.0
14 TraesCS4B01G046500 chr4D 94.737 57 3 0 237 293 21165640 21165584 4.430000e-14 89.8
15 TraesCS4B01G046500 chr4A 88.700 646 48 5 1946 2582 580303250 580302621 0.000000e+00 765.0
16 TraesCS4B01G046500 chr4A 86.192 717 53 17 1130 1829 580303939 580303252 0.000000e+00 734.0
17 TraesCS4B01G046500 chr4A 91.039 279 18 4 433 707 580304751 580304476 1.410000e-98 370.0
18 TraesCS4B01G046500 chr4A 94.419 215 8 2 3016 3227 580302273 580302060 8.630000e-86 327.0
19 TraesCS4B01G046500 chr4A 95.882 170 4 2 956 1125 580304149 580303983 4.100000e-69 272.0
20 TraesCS4B01G046500 chr4A 90.541 148 10 1 824 967 580304316 580304169 3.290000e-45 193.0
21 TraesCS4B01G046500 chr4A 80.000 245 32 10 2587 2819 580302671 580302432 7.160000e-37 165.0
22 TraesCS4B01G046500 chr4A 94.253 87 2 1 231 314 580304707 580304621 2.610000e-26 130.0
23 TraesCS4B01G046500 chr4A 95.455 44 2 0 783 826 580304380 580304337 1.610000e-08 71.3
24 TraesCS4B01G046500 chr5B 92.564 390 20 2 1954 2339 86129898 86130282 4.710000e-153 551.0
25 TraesCS4B01G046500 chr5B 93.333 255 17 0 1577 1831 86129640 86129894 8.450000e-101 377.0
26 TraesCS4B01G046500 chr6B 97.561 123 3 0 1824 1946 164883038 164882916 9.070000e-51 211.0
27 TraesCS4B01G046500 chr6B 84.615 104 12 4 1 103 294736802 294736902 2.050000e-17 100.0
28 TraesCS4B01G046500 chr3B 83.264 239 31 8 475 711 114881368 114881137 9.070000e-51 211.0
29 TraesCS4B01G046500 chr3B 85.714 70 4 4 457 524 114881445 114881380 5.780000e-08 69.4
30 TraesCS4B01G046500 chr2B 97.561 123 3 0 1824 1946 653603259 653603137 9.070000e-51 211.0
31 TraesCS4B01G046500 chr2B 94.656 131 4 3 1824 1952 653633472 653633343 1.960000e-47 200.0
32 TraesCS4B01G046500 chr1B 96.800 125 4 0 1823 1947 674876251 674876127 3.260000e-50 209.0
33 TraesCS4B01G046500 chr1B 89.610 77 7 1 1 77 198660346 198660421 2.650000e-16 97.1
34 TraesCS4B01G046500 chr6D 97.521 121 3 0 1825 1945 420763807 420763927 1.170000e-49 207.0
35 TraesCS4B01G046500 chr6D 96.721 122 3 1 1824 1945 394829741 394829861 5.460000e-48 202.0
36 TraesCS4B01G046500 chr3D 97.500 120 3 0 1828 1947 66262960 66262841 4.220000e-49 206.0
37 TraesCS4B01G046500 chr3D 81.557 244 35 8 473 711 67540999 67541237 3.290000e-45 193.0
38 TraesCS4B01G046500 chr5D 95.312 128 4 2 1828 1954 47283884 47284010 5.460000e-48 202.0
39 TraesCS4B01G046500 chr3A 93.388 121 5 1 951 1071 555428666 555428549 3.310000e-40 176.0
40 TraesCS4B01G046500 chr3A 80.000 260 33 13 463 711 78899255 78899506 1.190000e-39 174.0
41 TraesCS4B01G046500 chr7A 91.597 119 7 2 953 1071 643761362 643761477 9.260000e-36 161.0
42 TraesCS4B01G046500 chr6A 83.178 107 14 4 1 106 231703414 231703311 9.530000e-16 95.3
43 TraesCS4B01G046500 chr2D 87.356 87 5 5 29 115 55315062 55315142 9.530000e-16 95.3
44 TraesCS4B01G046500 chr2D 91.803 61 4 1 37 97 55267048 55266989 2.060000e-12 84.2
45 TraesCS4B01G046500 chr2D 91.304 46 0 4 37 78 318260513 318260468 3.480000e-05 60.2
46 TraesCS4B01G046500 chr7B 89.231 65 6 1 15 79 227007848 227007785 2.670000e-11 80.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G046500 chr4B 33621106 33624332 3226 False 2086.666667 5960 99.206667 1 3227 3 chr4B.!!$F2 3226
1 TraesCS4B01G046500 chr4B 299459027 299459681 654 False 459.500000 542 92.605500 1577 2339 2 chr4B.!!$F3 762
2 TraesCS4B01G046500 chr4D 21150050 21152794 2744 True 446.833333 808 89.400333 532 3227 6 chr4D.!!$R1 2695
3 TraesCS4B01G046500 chr4A 580302060 580304751 2691 True 336.366667 765 90.720111 231 3227 9 chr4A.!!$R1 2996
4 TraesCS4B01G046500 chr5B 86129640 86130282 642 False 464.000000 551 92.948500 1577 2339 2 chr5B.!!$F1 762

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
300 301 0.035534 TTAGGGAAATGCTGCGCTCA 60.036 50.0 9.73 7.23 0.00 4.26 F
1844 2070 0.032813 ATTACTCCCTCCGTCCGGAA 60.033 55.0 5.23 0.00 44.66 4.30 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1921 2147 0.032813 TCCCTCCGTCCGGAATTACT 60.033 55.0 5.23 0.0 44.66 2.24 R
2798 3146 0.921896 AGATGGCTAATGCACCACCT 59.078 50.0 0.00 0.0 39.19 4.00 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 2.814410 CACAGTGTCGTGTAGGCTG 58.186 57.895 0.00 0.00 32.00 4.85
19 20 0.667487 CACAGTGTCGTGTAGGCTGG 60.667 60.000 0.00 0.00 32.00 4.85
20 21 1.738099 CAGTGTCGTGTAGGCTGGC 60.738 63.158 0.00 0.00 0.00 4.85
21 22 1.908793 AGTGTCGTGTAGGCTGGCT 60.909 57.895 9.28 9.28 0.00 4.75
22 23 1.446272 GTGTCGTGTAGGCTGGCTC 60.446 63.158 7.13 0.20 0.00 4.70
23 24 2.184579 GTCGTGTAGGCTGGCTCC 59.815 66.667 7.13 0.00 0.00 4.70
24 25 2.037367 TCGTGTAGGCTGGCTCCT 59.963 61.111 7.13 4.43 40.21 3.69
25 26 2.185350 CGTGTAGGCTGGCTCCTG 59.815 66.667 7.13 0.00 37.01 3.86
26 27 2.586792 GTGTAGGCTGGCTCCTGG 59.413 66.667 7.13 0.00 37.01 4.45
27 28 2.688666 TGTAGGCTGGCTCCTGGG 60.689 66.667 7.13 0.00 37.01 4.45
28 29 2.689034 GTAGGCTGGCTCCTGGGT 60.689 66.667 7.13 0.00 37.01 4.51
29 30 1.382695 GTAGGCTGGCTCCTGGGTA 60.383 63.158 7.13 0.00 37.01 3.69
30 31 0.764752 GTAGGCTGGCTCCTGGGTAT 60.765 60.000 7.13 0.00 37.01 2.73
31 32 0.764369 TAGGCTGGCTCCTGGGTATG 60.764 60.000 7.13 0.00 37.01 2.39
32 33 2.072487 GGCTGGCTCCTGGGTATGA 61.072 63.158 0.00 0.00 0.00 2.15
33 34 1.147153 GCTGGCTCCTGGGTATGAC 59.853 63.158 0.00 0.00 0.00 3.06
34 35 1.832912 CTGGCTCCTGGGTATGACC 59.167 63.158 0.00 0.00 37.60 4.02
35 36 0.982852 CTGGCTCCTGGGTATGACCA 60.983 60.000 0.00 0.00 41.02 4.02
42 43 3.683885 TGGGTATGACCAGACGAGT 57.316 52.632 0.00 0.00 41.02 4.18
43 44 1.471119 TGGGTATGACCAGACGAGTC 58.529 55.000 0.00 0.00 41.02 3.36
44 45 0.381089 GGGTATGACCAGACGAGTCG 59.619 60.000 11.85 11.85 41.02 4.18
45 46 1.093159 GGTATGACCAGACGAGTCGT 58.907 55.000 20.02 20.02 39.81 4.34
46 47 1.202154 GGTATGACCAGACGAGTCGTG 60.202 57.143 25.31 11.59 38.10 4.35
47 48 1.467734 GTATGACCAGACGAGTCGTGT 59.532 52.381 25.31 17.55 41.37 4.49
51 52 4.535425 CAGACGAGTCGTGTGGTC 57.465 61.111 29.54 13.26 45.21 4.02
52 53 1.440518 CAGACGAGTCGTGTGGTCG 60.441 63.158 29.54 8.96 45.21 4.79
53 54 2.126965 GACGAGTCGTGTGGTCGG 60.127 66.667 25.31 0.00 41.37 4.79
54 55 3.606065 GACGAGTCGTGTGGTCGGG 62.606 68.421 25.31 0.00 41.37 5.14
55 56 3.667282 CGAGTCGTGTGGTCGGGT 61.667 66.667 3.82 0.00 0.00 5.28
56 57 2.049433 GAGTCGTGTGGTCGGGTG 60.049 66.667 0.00 0.00 0.00 4.61
57 58 2.836360 AGTCGTGTGGTCGGGTGT 60.836 61.111 0.00 0.00 0.00 4.16
58 59 2.355481 GTCGTGTGGTCGGGTGTC 60.355 66.667 0.00 0.00 0.00 3.67
59 60 3.608662 TCGTGTGGTCGGGTGTCC 61.609 66.667 0.00 0.00 0.00 4.02
60 61 3.918977 CGTGTGGTCGGGTGTCCA 61.919 66.667 0.00 0.00 0.00 4.02
61 62 2.747686 GTGTGGTCGGGTGTCCAT 59.252 61.111 0.00 0.00 35.72 3.41
62 63 1.072505 GTGTGGTCGGGTGTCCATT 59.927 57.895 0.00 0.00 35.72 3.16
63 64 1.072332 TGTGGTCGGGTGTCCATTG 59.928 57.895 0.00 0.00 35.72 2.82
64 65 1.072505 GTGGTCGGGTGTCCATTGT 59.927 57.895 0.00 0.00 35.72 2.71
65 66 0.953960 GTGGTCGGGTGTCCATTGTC 60.954 60.000 0.00 0.00 35.72 3.18
66 67 1.740296 GGTCGGGTGTCCATTGTCG 60.740 63.158 0.00 0.00 0.00 4.35
67 68 1.005394 GTCGGGTGTCCATTGTCGT 60.005 57.895 0.00 0.00 0.00 4.34
68 69 1.012486 GTCGGGTGTCCATTGTCGTC 61.012 60.000 0.00 0.00 0.00 4.20
69 70 1.005512 CGGGTGTCCATTGTCGTCA 60.006 57.895 0.00 0.00 0.00 4.35
70 71 1.289109 CGGGTGTCCATTGTCGTCAC 61.289 60.000 0.00 0.00 0.00 3.67
71 72 0.250124 GGGTGTCCATTGTCGTCACA 60.250 55.000 0.00 0.00 0.00 3.58
72 73 0.865769 GGTGTCCATTGTCGTCACAC 59.134 55.000 0.00 0.00 37.27 3.82
73 74 0.506932 GTGTCCATTGTCGTCACACG 59.493 55.000 0.00 0.00 44.19 4.49
74 75 0.103390 TGTCCATTGTCGTCACACGT 59.897 50.000 0.00 0.00 43.14 4.49
75 76 0.506932 GTCCATTGTCGTCACACGTG 59.493 55.000 15.48 15.48 43.14 4.49
76 77 0.103390 TCCATTGTCGTCACACGTGT 59.897 50.000 17.22 17.22 43.14 4.49
77 78 0.232046 CCATTGTCGTCACACGTGTG 59.768 55.000 37.04 37.04 46.91 3.82
78 79 0.232046 CATTGTCGTCACACGTGTGG 59.768 55.000 39.88 28.05 45.65 4.17
79 80 0.179094 ATTGTCGTCACACGTGTGGT 60.179 50.000 39.88 19.09 45.65 4.16
92 93 4.111375 ACGTGTGGTGAATATCAGAGTC 57.889 45.455 0.00 0.00 0.00 3.36
93 94 3.119101 ACGTGTGGTGAATATCAGAGTCC 60.119 47.826 0.00 0.00 0.00 3.85
94 95 3.119137 CGTGTGGTGAATATCAGAGTCCA 60.119 47.826 0.00 0.00 0.00 4.02
95 96 4.620567 CGTGTGGTGAATATCAGAGTCCAA 60.621 45.833 0.00 0.00 0.00 3.53
96 97 4.872691 GTGTGGTGAATATCAGAGTCCAAG 59.127 45.833 0.00 0.00 0.00 3.61
97 98 4.777366 TGTGGTGAATATCAGAGTCCAAGA 59.223 41.667 0.00 0.00 0.00 3.02
98 99 5.248248 TGTGGTGAATATCAGAGTCCAAGAA 59.752 40.000 0.00 0.00 0.00 2.52
99 100 6.173339 GTGGTGAATATCAGAGTCCAAGAAA 58.827 40.000 0.00 0.00 0.00 2.52
100 101 6.825721 GTGGTGAATATCAGAGTCCAAGAAAT 59.174 38.462 0.00 0.00 0.00 2.17
101 102 7.987458 GTGGTGAATATCAGAGTCCAAGAAATA 59.013 37.037 0.00 0.00 0.00 1.40
102 103 8.548025 TGGTGAATATCAGAGTCCAAGAAATAA 58.452 33.333 0.00 0.00 0.00 1.40
103 104 9.396022 GGTGAATATCAGAGTCCAAGAAATAAA 57.604 33.333 0.00 0.00 0.00 1.40
110 111 9.745018 ATCAGAGTCCAAGAAATAAAAGATGAA 57.255 29.630 0.00 0.00 0.00 2.57
111 112 9.573166 TCAGAGTCCAAGAAATAAAAGATGAAA 57.427 29.630 0.00 0.00 0.00 2.69
112 113 9.837525 CAGAGTCCAAGAAATAAAAGATGAAAG 57.162 33.333 0.00 0.00 0.00 2.62
113 114 9.579932 AGAGTCCAAGAAATAAAAGATGAAAGT 57.420 29.630 0.00 0.00 0.00 2.66
127 128 9.899226 AAAAGATGAAAGTATTAGACAAGCAAC 57.101 29.630 0.00 0.00 0.00 4.17
128 129 8.854614 AAGATGAAAGTATTAGACAAGCAACT 57.145 30.769 0.00 0.00 0.00 3.16
129 130 8.485976 AGATGAAAGTATTAGACAAGCAACTC 57.514 34.615 0.00 0.00 0.00 3.01
130 131 8.097038 AGATGAAAGTATTAGACAAGCAACTCA 58.903 33.333 0.00 0.00 0.00 3.41
131 132 7.658179 TGAAAGTATTAGACAAGCAACTCAG 57.342 36.000 0.00 0.00 0.00 3.35
132 133 7.441836 TGAAAGTATTAGACAAGCAACTCAGA 58.558 34.615 0.00 0.00 0.00 3.27
133 134 7.931407 TGAAAGTATTAGACAAGCAACTCAGAA 59.069 33.333 0.00 0.00 0.00 3.02
134 135 8.854614 AAAGTATTAGACAAGCAACTCAGAAT 57.145 30.769 0.00 0.00 0.00 2.40
135 136 7.840342 AGTATTAGACAAGCAACTCAGAATG 57.160 36.000 0.00 0.00 37.54 2.67
136 137 7.390027 AGTATTAGACAAGCAACTCAGAATGT 58.610 34.615 0.00 0.00 37.40 2.71
137 138 6.734104 ATTAGACAAGCAACTCAGAATGTC 57.266 37.500 0.00 0.00 37.91 3.06
138 139 4.077300 AGACAAGCAACTCAGAATGTCA 57.923 40.909 6.50 0.00 39.60 3.58
139 140 4.454678 AGACAAGCAACTCAGAATGTCAA 58.545 39.130 6.50 0.00 39.60 3.18
140 141 4.883585 AGACAAGCAACTCAGAATGTCAAA 59.116 37.500 6.50 0.00 39.60 2.69
141 142 5.008415 AGACAAGCAACTCAGAATGTCAAAG 59.992 40.000 6.50 0.00 39.60 2.77
142 143 4.883585 ACAAGCAACTCAGAATGTCAAAGA 59.116 37.500 0.00 0.00 37.40 2.52
143 144 5.357878 ACAAGCAACTCAGAATGTCAAAGAA 59.642 36.000 0.00 0.00 37.40 2.52
144 145 6.040166 ACAAGCAACTCAGAATGTCAAAGAAT 59.960 34.615 0.00 0.00 37.40 2.40
145 146 6.645790 AGCAACTCAGAATGTCAAAGAATT 57.354 33.333 0.00 0.00 37.40 2.17
146 147 7.750229 AGCAACTCAGAATGTCAAAGAATTA 57.250 32.000 0.00 0.00 37.40 1.40
147 148 8.169977 AGCAACTCAGAATGTCAAAGAATTAA 57.830 30.769 0.00 0.00 37.40 1.40
148 149 8.295288 AGCAACTCAGAATGTCAAAGAATTAAG 58.705 33.333 0.00 0.00 37.40 1.85
149 150 7.061557 GCAACTCAGAATGTCAAAGAATTAAGC 59.938 37.037 0.00 0.00 37.40 3.09
150 151 7.750229 ACTCAGAATGTCAAAGAATTAAGCA 57.250 32.000 0.00 0.00 37.40 3.91
151 152 8.169977 ACTCAGAATGTCAAAGAATTAAGCAA 57.830 30.769 0.00 0.00 37.40 3.91
152 153 8.800332 ACTCAGAATGTCAAAGAATTAAGCAAT 58.200 29.630 0.00 0.00 37.40 3.56
204 205 8.494016 AGTAAAAAGAACATCATACTACAGCC 57.506 34.615 0.00 0.00 0.00 4.85
205 206 6.759497 AAAAAGAACATCATACTACAGCCC 57.241 37.500 0.00 0.00 0.00 5.19
206 207 5.700402 AAAGAACATCATACTACAGCCCT 57.300 39.130 0.00 0.00 0.00 5.19
207 208 5.700402 AAGAACATCATACTACAGCCCTT 57.300 39.130 0.00 0.00 0.00 3.95
208 209 5.028549 AGAACATCATACTACAGCCCTTG 57.971 43.478 0.00 0.00 0.00 3.61
209 210 3.845781 ACATCATACTACAGCCCTTGG 57.154 47.619 0.00 0.00 0.00 3.61
210 211 3.115390 ACATCATACTACAGCCCTTGGT 58.885 45.455 0.00 0.00 0.00 3.67
211 212 3.523564 ACATCATACTACAGCCCTTGGTT 59.476 43.478 0.00 0.00 0.00 3.67
212 213 4.018415 ACATCATACTACAGCCCTTGGTTT 60.018 41.667 0.00 0.00 0.00 3.27
213 214 3.950397 TCATACTACAGCCCTTGGTTTG 58.050 45.455 0.00 0.00 0.00 2.93
214 215 3.585289 TCATACTACAGCCCTTGGTTTGA 59.415 43.478 0.00 0.00 0.00 2.69
215 216 4.227300 TCATACTACAGCCCTTGGTTTGAT 59.773 41.667 0.00 0.00 0.00 2.57
216 217 3.073274 ACTACAGCCCTTGGTTTGATC 57.927 47.619 0.00 0.00 0.00 2.92
217 218 2.290960 ACTACAGCCCTTGGTTTGATCC 60.291 50.000 0.00 0.00 0.00 3.36
218 219 0.609131 ACAGCCCTTGGTTTGATCCG 60.609 55.000 0.00 0.00 0.00 4.18
219 220 1.678970 AGCCCTTGGTTTGATCCGC 60.679 57.895 0.00 0.00 0.00 5.54
220 221 1.678970 GCCCTTGGTTTGATCCGCT 60.679 57.895 0.00 0.00 0.00 5.52
221 222 1.937546 GCCCTTGGTTTGATCCGCTG 61.938 60.000 0.00 0.00 0.00 5.18
222 223 0.322456 CCCTTGGTTTGATCCGCTGA 60.322 55.000 0.00 0.00 0.00 4.26
223 224 1.533625 CCTTGGTTTGATCCGCTGAA 58.466 50.000 0.00 0.00 0.00 3.02
224 225 1.200020 CCTTGGTTTGATCCGCTGAAC 59.800 52.381 0.00 0.00 0.00 3.18
225 226 1.879380 CTTGGTTTGATCCGCTGAACA 59.121 47.619 0.00 0.00 0.00 3.18
226 227 1.974265 TGGTTTGATCCGCTGAACAA 58.026 45.000 0.00 0.00 32.14 2.83
227 228 2.302260 TGGTTTGATCCGCTGAACAAA 58.698 42.857 9.04 9.04 39.90 2.83
230 231 0.871722 TTGATCCGCTGAACAAACCG 59.128 50.000 0.00 0.00 31.20 4.44
231 232 1.134694 GATCCGCTGAACAAACCGC 59.865 57.895 0.00 0.00 0.00 5.68
232 233 1.298859 GATCCGCTGAACAAACCGCT 61.299 55.000 0.00 0.00 0.00 5.52
233 234 1.577328 ATCCGCTGAACAAACCGCTG 61.577 55.000 0.00 0.00 0.00 5.18
234 235 2.252260 CGCTGAACAAACCGCTGG 59.748 61.111 0.00 0.00 0.00 4.85
235 236 2.644992 GCTGAACAAACCGCTGGG 59.355 61.111 0.00 0.00 40.11 4.45
236 237 2.919494 GCTGAACAAACCGCTGGGG 61.919 63.158 9.49 9.49 43.62 4.96
237 238 2.203422 TGAACAAACCGCTGGGGG 60.203 61.111 15.73 5.80 41.60 5.40
238 239 2.114411 GAACAAACCGCTGGGGGA 59.886 61.111 15.73 0.00 41.60 4.81
239 240 1.971695 GAACAAACCGCTGGGGGAG 60.972 63.158 15.73 6.74 41.60 4.30
240 241 4.660938 ACAAACCGCTGGGGGAGC 62.661 66.667 15.73 0.00 45.20 4.70
247 248 4.468689 GCTGGGGGAGCGGTACAC 62.469 72.222 0.00 0.00 38.15 2.90
251 252 3.152400 GGGGAGCGGTACACGGAT 61.152 66.667 0.00 0.00 44.51 4.18
252 253 2.106332 GGGAGCGGTACACGGATG 59.894 66.667 0.00 0.00 44.51 3.51
253 254 2.718073 GGGAGCGGTACACGGATGT 61.718 63.158 0.00 0.00 44.51 3.06
254 255 1.386525 GGGAGCGGTACACGGATGTA 61.387 60.000 0.00 0.00 44.51 2.29
266 267 3.065575 GGATGTACCAGTCCGCTTG 57.934 57.895 0.00 0.00 38.79 4.01
267 268 1.090052 GGATGTACCAGTCCGCTTGC 61.090 60.000 0.00 0.00 38.79 4.01
268 269 0.108138 GATGTACCAGTCCGCTTGCT 60.108 55.000 0.00 0.00 0.00 3.91
269 270 0.324943 ATGTACCAGTCCGCTTGCTT 59.675 50.000 0.00 0.00 0.00 3.91
270 271 0.970640 TGTACCAGTCCGCTTGCTTA 59.029 50.000 0.00 0.00 0.00 3.09
271 272 1.345089 TGTACCAGTCCGCTTGCTTAA 59.655 47.619 0.00 0.00 0.00 1.85
272 273 2.224329 TGTACCAGTCCGCTTGCTTAAA 60.224 45.455 0.00 0.00 0.00 1.52
273 274 2.200373 ACCAGTCCGCTTGCTTAAAT 57.800 45.000 0.00 0.00 0.00 1.40
274 275 2.084546 ACCAGTCCGCTTGCTTAAATC 58.915 47.619 0.00 0.00 0.00 2.17
275 276 1.401905 CCAGTCCGCTTGCTTAAATCC 59.598 52.381 0.00 0.00 0.00 3.01
276 277 2.083774 CAGTCCGCTTGCTTAAATCCA 58.916 47.619 0.00 0.00 0.00 3.41
277 278 2.096496 CAGTCCGCTTGCTTAAATCCAG 59.904 50.000 0.00 0.00 0.00 3.86
278 279 2.084546 GTCCGCTTGCTTAAATCCAGT 58.915 47.619 0.00 0.00 0.00 4.00
279 280 2.488153 GTCCGCTTGCTTAAATCCAGTT 59.512 45.455 0.00 0.00 0.00 3.16
280 281 3.687698 GTCCGCTTGCTTAAATCCAGTTA 59.312 43.478 0.00 0.00 0.00 2.24
281 282 4.335594 GTCCGCTTGCTTAAATCCAGTTAT 59.664 41.667 0.00 0.00 0.00 1.89
282 283 4.947388 TCCGCTTGCTTAAATCCAGTTATT 59.053 37.500 0.00 0.00 0.00 1.40
283 284 6.037830 GTCCGCTTGCTTAAATCCAGTTATTA 59.962 38.462 0.00 0.00 0.00 0.98
284 285 6.260050 TCCGCTTGCTTAAATCCAGTTATTAG 59.740 38.462 0.00 0.00 0.00 1.73
285 286 6.430451 CGCTTGCTTAAATCCAGTTATTAGG 58.570 40.000 0.00 0.00 0.00 2.69
286 287 6.513393 CGCTTGCTTAAATCCAGTTATTAGGG 60.513 42.308 0.00 0.00 0.00 3.53
287 288 6.546034 GCTTGCTTAAATCCAGTTATTAGGGA 59.454 38.462 0.00 0.00 34.70 4.20
288 289 7.068226 GCTTGCTTAAATCCAGTTATTAGGGAA 59.932 37.037 0.00 0.00 33.73 3.97
289 290 8.887264 TTGCTTAAATCCAGTTATTAGGGAAA 57.113 30.769 0.00 0.00 33.73 3.13
290 291 9.487442 TTGCTTAAATCCAGTTATTAGGGAAAT 57.513 29.630 0.00 0.00 33.73 2.17
291 292 8.912988 TGCTTAAATCCAGTTATTAGGGAAATG 58.087 33.333 0.00 0.00 33.73 2.32
292 293 7.867909 GCTTAAATCCAGTTATTAGGGAAATGC 59.132 37.037 0.00 0.00 33.73 3.56
293 294 9.136323 CTTAAATCCAGTTATTAGGGAAATGCT 57.864 33.333 0.00 0.00 33.73 3.79
294 295 6.966534 AATCCAGTTATTAGGGAAATGCTG 57.033 37.500 0.00 0.00 33.73 4.41
295 296 4.207165 TCCAGTTATTAGGGAAATGCTGC 58.793 43.478 0.00 0.00 33.86 5.25
296 297 3.003689 CCAGTTATTAGGGAAATGCTGCG 59.996 47.826 0.00 0.00 33.86 5.18
297 298 2.618709 AGTTATTAGGGAAATGCTGCGC 59.381 45.455 0.00 0.00 0.00 6.09
298 299 2.618709 GTTATTAGGGAAATGCTGCGCT 59.381 45.455 9.73 0.00 0.00 5.92
299 300 1.312815 ATTAGGGAAATGCTGCGCTC 58.687 50.000 9.73 0.28 0.00 5.03
300 301 0.035534 TTAGGGAAATGCTGCGCTCA 60.036 50.000 9.73 7.23 0.00 4.26
301 302 0.744414 TAGGGAAATGCTGCGCTCAC 60.744 55.000 9.73 0.00 0.00 3.51
302 303 2.334946 GGGAAATGCTGCGCTCACA 61.335 57.895 9.73 4.25 0.00 3.58
303 304 1.154150 GGAAATGCTGCGCTCACAC 60.154 57.895 9.73 2.32 0.00 3.82
304 305 1.510623 GAAATGCTGCGCTCACACG 60.511 57.895 9.73 0.00 0.00 4.49
305 306 2.839324 GAAATGCTGCGCTCACACGG 62.839 60.000 9.73 0.00 0.00 4.94
306 307 4.687215 ATGCTGCGCTCACACGGT 62.687 61.111 9.73 0.00 0.00 4.83
313 314 2.669569 GCTCACACGGTGCACCAT 60.670 61.111 34.16 19.35 36.06 3.55
314 315 1.375396 GCTCACACGGTGCACCATA 60.375 57.895 34.16 13.67 36.06 2.74
315 316 0.744414 GCTCACACGGTGCACCATAT 60.744 55.000 34.16 17.12 36.06 1.78
316 317 1.737838 CTCACACGGTGCACCATATT 58.262 50.000 34.16 13.28 35.14 1.28
317 318 2.083774 CTCACACGGTGCACCATATTT 58.916 47.619 34.16 10.49 35.14 1.40
318 319 2.080693 TCACACGGTGCACCATATTTC 58.919 47.619 34.16 6.82 35.14 2.17
319 320 1.809547 CACACGGTGCACCATATTTCA 59.190 47.619 34.16 0.00 35.14 2.69
320 321 2.227626 CACACGGTGCACCATATTTCAA 59.772 45.455 34.16 0.00 35.14 2.69
321 322 2.887783 ACACGGTGCACCATATTTCAAA 59.112 40.909 34.16 0.00 35.14 2.69
322 323 3.057596 ACACGGTGCACCATATTTCAAAG 60.058 43.478 34.16 16.56 35.14 2.77
323 324 3.190327 CACGGTGCACCATATTTCAAAGA 59.810 43.478 34.16 0.00 35.14 2.52
324 325 4.016444 ACGGTGCACCATATTTCAAAGAT 58.984 39.130 34.16 3.51 35.14 2.40
325 326 4.142403 ACGGTGCACCATATTTCAAAGATG 60.142 41.667 34.16 15.42 35.14 2.90
326 327 4.114794 GGTGCACCATATTTCAAAGATGC 58.885 43.478 31.23 0.00 35.64 3.91
327 328 4.381825 GGTGCACCATATTTCAAAGATGCA 60.382 41.667 31.23 0.00 39.38 3.96
328 329 5.353938 GTGCACCATATTTCAAAGATGCAT 58.646 37.500 5.22 0.00 43.13 3.96
329 330 6.461370 GGTGCACCATATTTCAAAGATGCATA 60.461 38.462 31.23 0.00 43.13 3.14
330 331 7.149973 GTGCACCATATTTCAAAGATGCATAT 58.850 34.615 5.22 0.00 43.13 1.78
331 332 7.654520 GTGCACCATATTTCAAAGATGCATATT 59.345 33.333 5.22 0.00 43.13 1.28
332 333 8.858094 TGCACCATATTTCAAAGATGCATATTA 58.142 29.630 7.05 0.00 36.94 0.98
333 334 9.865321 GCACCATATTTCAAAGATGCATATTAT 57.135 29.630 7.05 0.00 0.00 1.28
370 371 9.777297 AATGGTTGCTAAGACACAATAAAAATT 57.223 25.926 0.00 0.00 0.00 1.82
371 372 8.810652 TGGTTGCTAAGACACAATAAAAATTC 57.189 30.769 0.00 0.00 0.00 2.17
372 373 8.417106 TGGTTGCTAAGACACAATAAAAATTCA 58.583 29.630 0.00 0.00 0.00 2.57
373 374 9.423061 GGTTGCTAAGACACAATAAAAATTCAT 57.577 29.630 0.00 0.00 0.00 2.57
376 377 9.844790 TGCTAAGACACAATAAAAATTCATCAG 57.155 29.630 0.00 0.00 0.00 2.90
381 382 9.903682 AGACACAATAAAAATTCATCAGACAAG 57.096 29.630 0.00 0.00 0.00 3.16
382 383 9.132521 GACACAATAAAAATTCATCAGACAAGG 57.867 33.333 0.00 0.00 0.00 3.61
383 384 8.090214 ACACAATAAAAATTCATCAGACAAGGG 58.910 33.333 0.00 0.00 0.00 3.95
384 385 7.063780 CACAATAAAAATTCATCAGACAAGGGC 59.936 37.037 0.00 0.00 0.00 5.19
385 386 4.541973 AAAAATTCATCAGACAAGGGCC 57.458 40.909 0.00 0.00 0.00 5.80
386 387 2.149973 AATTCATCAGACAAGGGCCC 57.850 50.000 16.46 16.46 0.00 5.80
387 388 1.302907 ATTCATCAGACAAGGGCCCT 58.697 50.000 22.28 22.28 0.00 5.19
388 389 1.075601 TTCATCAGACAAGGGCCCTT 58.924 50.000 32.48 32.48 36.60 3.95
402 403 4.776322 CCTTGGTGCCATCCGCGA 62.776 66.667 8.23 0.00 42.08 5.87
403 404 2.514592 CTTGGTGCCATCCGCGAT 60.515 61.111 8.23 0.00 42.08 4.58
404 405 1.227527 CTTGGTGCCATCCGCGATA 60.228 57.895 8.23 0.00 42.08 2.92
405 406 0.603707 CTTGGTGCCATCCGCGATAT 60.604 55.000 8.23 0.00 42.08 1.63
406 407 0.179032 TTGGTGCCATCCGCGATATT 60.179 50.000 8.23 0.00 42.08 1.28
407 408 0.682292 TGGTGCCATCCGCGATATTA 59.318 50.000 8.23 0.00 42.08 0.98
408 409 1.070914 TGGTGCCATCCGCGATATTAA 59.929 47.619 8.23 0.00 42.08 1.40
409 410 2.290008 TGGTGCCATCCGCGATATTAAT 60.290 45.455 8.23 0.00 42.08 1.40
410 411 2.747446 GGTGCCATCCGCGATATTAATT 59.253 45.455 8.23 0.00 42.08 1.40
411 412 3.426159 GGTGCCATCCGCGATATTAATTG 60.426 47.826 8.23 0.00 42.08 2.32
412 413 3.188460 GTGCCATCCGCGATATTAATTGT 59.812 43.478 8.23 0.00 42.08 2.71
413 414 3.188254 TGCCATCCGCGATATTAATTGTG 59.812 43.478 8.23 0.00 42.08 3.33
414 415 3.747193 CCATCCGCGATATTAATTGTGC 58.253 45.455 8.23 0.00 0.00 4.57
415 416 3.188254 CCATCCGCGATATTAATTGTGCA 59.812 43.478 8.23 0.00 0.00 4.57
416 417 4.142622 CCATCCGCGATATTAATTGTGCAT 60.143 41.667 8.23 0.00 0.00 3.96
417 418 4.403015 TCCGCGATATTAATTGTGCATG 57.597 40.909 8.23 0.00 0.00 4.06
418 419 4.061596 TCCGCGATATTAATTGTGCATGA 58.938 39.130 8.23 0.00 0.00 3.07
419 420 4.694982 TCCGCGATATTAATTGTGCATGAT 59.305 37.500 8.23 0.00 0.00 2.45
420 421 4.789629 CCGCGATATTAATTGTGCATGATG 59.210 41.667 8.23 0.00 0.00 3.07
421 422 5.384787 CGCGATATTAATTGTGCATGATGT 58.615 37.500 0.00 0.00 0.00 3.06
422 423 5.852755 CGCGATATTAATTGTGCATGATGTT 59.147 36.000 0.00 0.00 0.00 2.71
423 424 6.183359 CGCGATATTAATTGTGCATGATGTTG 60.183 38.462 0.00 0.00 0.00 3.33
424 425 6.857451 GCGATATTAATTGTGCATGATGTTGA 59.143 34.615 0.00 0.00 0.00 3.18
425 426 7.539710 GCGATATTAATTGTGCATGATGTTGAT 59.460 33.333 0.00 0.00 0.00 2.57
426 427 8.846607 CGATATTAATTGTGCATGATGTTGATG 58.153 33.333 0.00 0.00 0.00 3.07
427 428 9.902196 GATATTAATTGTGCATGATGTTGATGA 57.098 29.630 0.00 0.00 0.00 2.92
429 430 8.812147 ATTAATTGTGCATGATGTTGATGATC 57.188 30.769 0.00 0.00 0.00 2.92
430 431 6.465439 AATTGTGCATGATGTTGATGATCT 57.535 33.333 0.00 0.00 0.00 2.75
431 432 5.907866 TTGTGCATGATGTTGATGATCTT 57.092 34.783 0.00 0.00 0.00 2.40
432 433 5.494632 TGTGCATGATGTTGATGATCTTC 57.505 39.130 0.00 1.67 0.00 2.87
433 434 4.944930 TGTGCATGATGTTGATGATCTTCA 59.055 37.500 7.19 7.19 0.00 3.02
434 435 5.416326 TGTGCATGATGTTGATGATCTTCAA 59.584 36.000 17.55 17.55 33.32 2.69
435 436 6.071840 TGTGCATGATGTTGATGATCTTCAAA 60.072 34.615 21.74 14.02 37.36 2.69
436 437 6.809689 GTGCATGATGTTGATGATCTTCAAAA 59.190 34.615 21.74 18.23 37.36 2.44
437 438 7.491372 GTGCATGATGTTGATGATCTTCAAAAT 59.509 33.333 21.25 21.25 36.47 1.82
438 439 8.688151 TGCATGATGTTGATGATCTTCAAAATA 58.312 29.630 21.18 13.58 34.41 1.40
439 440 9.524106 GCATGATGTTGATGATCTTCAAAATAA 57.476 29.630 21.18 16.68 34.41 1.40
469 470 6.982160 TTTTAGGGGGAAAAAGAAAGTACC 57.018 37.500 0.00 0.00 0.00 3.34
542 546 3.003689 CCAGTTATTAGGGAAATGCTGCG 59.996 47.826 0.00 0.00 33.86 5.18
572 576 1.808531 GCACCATGTGAGGCTTGCAA 61.809 55.000 0.00 0.00 35.23 4.08
574 578 1.336517 CACCATGTGAGGCTTGCAAAG 60.337 52.381 0.00 0.00 40.85 2.77
650 654 1.202592 TGAGCAACGGTTGAAGTGCTA 60.203 47.619 24.20 1.81 32.34 3.49
660 664 6.665465 ACGGTTGAAGTGCTATTTTAAAGTC 58.335 36.000 0.00 0.00 0.00 3.01
663 667 7.136772 GGTTGAAGTGCTATTTTAAAGTCGTT 58.863 34.615 0.00 0.00 0.00 3.85
699 703 5.291128 CGTATAGCTGTGTGGGACTAAAAAG 59.709 44.000 0.00 0.00 0.00 2.27
701 705 4.373156 AGCTGTGTGGGACTAAAAAGAT 57.627 40.909 0.00 0.00 0.00 2.40
702 706 5.499004 AGCTGTGTGGGACTAAAAAGATA 57.501 39.130 0.00 0.00 0.00 1.98
703 707 5.246307 AGCTGTGTGGGACTAAAAAGATAC 58.754 41.667 0.00 0.00 0.00 2.24
705 709 4.913784 TGTGTGGGACTAAAAAGATACCC 58.086 43.478 0.00 0.00 37.99 3.69
706 710 4.351407 TGTGTGGGACTAAAAAGATACCCA 59.649 41.667 0.00 0.00 43.96 4.51
707 711 4.941873 GTGTGGGACTAAAAAGATACCCAG 59.058 45.833 0.00 0.00 46.23 4.45
708 712 3.945921 GTGGGACTAAAAAGATACCCAGC 59.054 47.826 0.00 0.00 46.23 4.85
710 714 3.202373 GGGACTAAAAAGATACCCAGCCT 59.798 47.826 0.00 0.00 37.50 4.58
711 715 4.325109 GGGACTAAAAAGATACCCAGCCTT 60.325 45.833 0.00 0.00 37.50 4.35
712 716 5.262009 GGACTAAAAAGATACCCAGCCTTT 58.738 41.667 0.00 0.00 0.00 3.11
713 717 5.715279 GGACTAAAAAGATACCCAGCCTTTT 59.285 40.000 0.00 0.00 40.57 2.27
714 718 6.127703 GGACTAAAAAGATACCCAGCCTTTTC 60.128 42.308 0.00 0.00 38.66 2.29
716 720 5.984695 AAAAAGATACCCAGCCTTTTCTC 57.015 39.130 0.00 0.00 38.66 2.87
717 721 3.653835 AAGATACCCAGCCTTTTCTCC 57.346 47.619 0.00 0.00 0.00 3.71
719 723 2.919602 AGATACCCAGCCTTTTCTCCAA 59.080 45.455 0.00 0.00 0.00 3.53
720 724 3.333680 AGATACCCAGCCTTTTCTCCAAA 59.666 43.478 0.00 0.00 0.00 3.28
721 725 2.470057 ACCCAGCCTTTTCTCCAAAA 57.530 45.000 0.00 0.00 0.00 2.44
722 726 2.758130 ACCCAGCCTTTTCTCCAAAAA 58.242 42.857 0.00 0.00 30.90 1.94
745 794 2.702270 AAACCCAGCCTCCTTTCAAT 57.298 45.000 0.00 0.00 0.00 2.57
746 795 2.702270 AACCCAGCCTCCTTTCAATT 57.298 45.000 0.00 0.00 0.00 2.32
747 796 2.702270 ACCCAGCCTCCTTTCAATTT 57.298 45.000 0.00 0.00 0.00 1.82
748 797 2.529632 ACCCAGCCTCCTTTCAATTTC 58.470 47.619 0.00 0.00 0.00 2.17
749 798 2.158325 ACCCAGCCTCCTTTCAATTTCA 60.158 45.455 0.00 0.00 0.00 2.69
750 799 2.899256 CCCAGCCTCCTTTCAATTTCAA 59.101 45.455 0.00 0.00 0.00 2.69
793 901 1.078567 CTCTGGTCTCTTGGGCTGC 60.079 63.158 0.00 0.00 0.00 5.25
949 1081 2.481289 AGAAGAGGAAGGAAAAGGCG 57.519 50.000 0.00 0.00 0.00 5.52
951 1083 0.402121 AAGAGGAAGGAAAAGGCGCT 59.598 50.000 7.64 0.00 0.00 5.92
953 1085 0.035915 GAGGAAGGAAAAGGCGCTCT 60.036 55.000 7.64 0.00 0.00 4.09
962 1129 0.530288 AAAGGCGCTCTCTCTCTGTC 59.470 55.000 7.64 0.00 0.00 3.51
969 1136 1.064758 GCTCTCTCTCTGTCTCTCCCA 60.065 57.143 0.00 0.00 0.00 4.37
1125 1292 1.770324 CAAGGCCAAAGGTCTCCCT 59.230 57.895 5.01 0.00 36.17 4.20
1127 1294 0.476611 AAGGCCAAAGGTCTCCCTCT 60.477 55.000 5.01 0.00 36.17 3.69
1128 1295 1.204113 AGGCCAAAGGTCTCCCTCTG 61.204 60.000 5.01 0.00 41.56 3.35
1167 1373 0.108019 ACGGAGTTCTTGACCCCAAC 59.892 55.000 0.00 0.00 37.78 3.77
1178 1384 0.112412 GACCCCAACCATCCTTGTGT 59.888 55.000 0.00 0.00 0.00 3.72
1180 1386 0.611896 CCCCAACCATCCTTGTGTCC 60.612 60.000 0.00 0.00 0.00 4.02
1216 1433 3.655276 AATGCCTTGTTTTCTGCAGAG 57.345 42.857 17.43 4.45 37.12 3.35
1237 1454 1.792006 TCGAAGGGAAAGAAACTCGC 58.208 50.000 0.00 0.00 0.00 5.03
1274 1491 1.140252 AGGTACGCCTCTCTCTCTCTC 59.860 57.143 0.00 0.00 42.67 3.20
1275 1492 1.140252 GGTACGCCTCTCTCTCTCTCT 59.860 57.143 0.00 0.00 0.00 3.10
1276 1493 2.480845 GTACGCCTCTCTCTCTCTCTC 58.519 57.143 0.00 0.00 0.00 3.20
1277 1494 1.204146 ACGCCTCTCTCTCTCTCTCT 58.796 55.000 0.00 0.00 0.00 3.10
1278 1495 1.139058 ACGCCTCTCTCTCTCTCTCTC 59.861 57.143 0.00 0.00 0.00 3.20
1279 1496 1.414181 CGCCTCTCTCTCTCTCTCTCT 59.586 57.143 0.00 0.00 0.00 3.10
1296 1513 6.931281 TCTCTCTCTGTCAAAATCAACGAATT 59.069 34.615 0.00 0.00 0.00 2.17
1323 1540 1.508632 GCGAAGAACTAGGTGTGCAA 58.491 50.000 0.00 0.00 0.00 4.08
1327 1544 3.997021 CGAAGAACTAGGTGTGCAAGAAT 59.003 43.478 0.00 0.00 0.00 2.40
1340 1557 6.263168 GGTGTGCAAGAATGGCTTATATACTT 59.737 38.462 0.00 0.00 34.64 2.24
1341 1558 7.201821 GGTGTGCAAGAATGGCTTATATACTTT 60.202 37.037 0.00 0.00 34.64 2.66
1414 1631 2.586792 CTACTGCTGGACCTGGGC 59.413 66.667 0.00 0.00 0.00 5.36
1415 1632 1.992277 CTACTGCTGGACCTGGGCT 60.992 63.158 0.00 0.00 0.00 5.19
1476 1693 9.909644 AGAATGCATCAATTAGCTTCATAAATC 57.090 29.630 0.00 0.00 0.00 2.17
1479 1696 8.861033 TGCATCAATTAGCTTCATAAATCAAC 57.139 30.769 0.00 0.00 0.00 3.18
1480 1697 7.644945 TGCATCAATTAGCTTCATAAATCAACG 59.355 33.333 0.00 0.00 0.00 4.10
1490 1708 6.034898 GCTTCATAAATCAACGGGACAAATTG 59.965 38.462 0.00 0.00 0.00 2.32
1494 1712 2.721274 TCAACGGGACAAATTGCATG 57.279 45.000 0.00 0.00 0.00 4.06
1526 1744 3.198068 TGATGATTTTCTAGCTCGGCAC 58.802 45.455 0.00 0.00 0.00 5.01
1550 1769 5.066893 CGTGTATGCTACCCTAGAACTGTTA 59.933 44.000 0.00 0.00 0.00 2.41
1593 1816 5.835819 TCTTGTGGTCTAGCTAGCATAAGAT 59.164 40.000 23.94 0.00 44.71 2.40
1605 1829 7.158021 AGCTAGCATAAGATACCTGTTGATTC 58.842 38.462 18.83 0.00 0.00 2.52
1610 1834 8.364142 AGCATAAGATACCTGTTGATTCTAGAC 58.636 37.037 0.00 0.00 0.00 2.59
1650 1874 4.464947 GGCAGATTCCTTTACTAGGCAAT 58.535 43.478 0.00 0.00 44.37 3.56
1761 1987 2.399611 GTTCTTGAATCGGCGCCG 59.600 61.111 42.13 42.13 41.35 6.46
1810 2036 4.494484 CCTGGTAAGCTAAATTGTTTGCC 58.506 43.478 0.00 0.00 36.29 4.52
1814 2040 6.220201 TGGTAAGCTAAATTGTTTGCCTTTC 58.780 36.000 0.00 0.00 36.29 2.62
1835 2061 2.055579 CCCCCTGGTTATTACTCCCTC 58.944 57.143 0.00 0.00 0.00 4.30
1836 2062 2.055579 CCCCTGGTTATTACTCCCTCC 58.944 57.143 0.00 0.00 0.00 4.30
1837 2063 1.692519 CCCTGGTTATTACTCCCTCCG 59.307 57.143 0.00 0.00 0.00 4.63
1839 2065 2.364647 CCTGGTTATTACTCCCTCCGTC 59.635 54.545 0.00 0.00 0.00 4.79
1840 2066 2.364647 CTGGTTATTACTCCCTCCGTCC 59.635 54.545 0.00 0.00 0.00 4.79
1841 2067 1.339291 GGTTATTACTCCCTCCGTCCG 59.661 57.143 0.00 0.00 0.00 4.79
1842 2068 1.339291 GTTATTACTCCCTCCGTCCGG 59.661 57.143 0.00 0.00 0.00 5.14
1843 2069 0.846015 TATTACTCCCTCCGTCCGGA 59.154 55.000 0.00 0.00 42.90 5.14
1844 2070 0.032813 ATTACTCCCTCCGTCCGGAA 60.033 55.000 5.23 0.00 44.66 4.30
1845 2071 0.251742 TTACTCCCTCCGTCCGGAAA 60.252 55.000 5.23 0.00 44.66 3.13
1846 2072 0.032813 TACTCCCTCCGTCCGGAAAT 60.033 55.000 5.23 0.00 44.66 2.17
1847 2073 0.032813 ACTCCCTCCGTCCGGAAATA 60.033 55.000 5.23 0.00 44.66 1.40
1848 2074 0.388294 CTCCCTCCGTCCGGAAATAC 59.612 60.000 5.23 0.00 44.66 1.89
1849 2075 0.032813 TCCCTCCGTCCGGAAATACT 60.033 55.000 5.23 0.00 44.66 2.12
1850 2076 0.828677 CCCTCCGTCCGGAAATACTT 59.171 55.000 5.23 0.00 44.66 2.24
1851 2077 1.472728 CCCTCCGTCCGGAAATACTTG 60.473 57.143 5.23 0.00 44.66 3.16
1852 2078 1.206371 CCTCCGTCCGGAAATACTTGT 59.794 52.381 5.23 0.00 44.66 3.16
1853 2079 2.537401 CTCCGTCCGGAAATACTTGTC 58.463 52.381 5.23 0.00 44.66 3.18
1854 2080 1.894466 TCCGTCCGGAAATACTTGTCA 59.106 47.619 5.23 0.00 42.05 3.58
1855 2081 2.498481 TCCGTCCGGAAATACTTGTCAT 59.502 45.455 5.23 0.00 42.05 3.06
1856 2082 3.055675 TCCGTCCGGAAATACTTGTCATT 60.056 43.478 5.23 0.00 42.05 2.57
1857 2083 3.063452 CCGTCCGGAAATACTTGTCATTG 59.937 47.826 5.23 0.00 37.50 2.82
1858 2084 3.930229 CGTCCGGAAATACTTGTCATTGA 59.070 43.478 5.23 0.00 0.00 2.57
1859 2085 4.390603 CGTCCGGAAATACTTGTCATTGAA 59.609 41.667 5.23 0.00 0.00 2.69
1860 2086 5.106869 CGTCCGGAAATACTTGTCATTGAAA 60.107 40.000 5.23 0.00 0.00 2.69
1861 2087 6.403200 CGTCCGGAAATACTTGTCATTGAAAT 60.403 38.462 5.23 0.00 0.00 2.17
1862 2088 6.747280 GTCCGGAAATACTTGTCATTGAAATG 59.253 38.462 5.23 0.00 37.75 2.32
1863 2089 6.035843 CCGGAAATACTTGTCATTGAAATGG 58.964 40.000 0.00 0.00 37.03 3.16
1864 2090 6.127758 CCGGAAATACTTGTCATTGAAATGGA 60.128 38.462 0.00 0.00 37.03 3.41
1865 2091 7.416664 CCGGAAATACTTGTCATTGAAATGGAT 60.417 37.037 0.00 0.00 37.03 3.41
1866 2092 7.433131 CGGAAATACTTGTCATTGAAATGGATG 59.567 37.037 3.31 0.00 37.03 3.51
1867 2093 8.253113 GGAAATACTTGTCATTGAAATGGATGT 58.747 33.333 3.31 2.77 37.03 3.06
1871 2097 7.707624 ACTTGTCATTGAAATGGATGTATGT 57.292 32.000 3.31 0.00 37.03 2.29
1872 2098 8.806429 ACTTGTCATTGAAATGGATGTATGTA 57.194 30.769 3.31 0.00 37.03 2.29
1873 2099 8.896744 ACTTGTCATTGAAATGGATGTATGTAG 58.103 33.333 3.31 0.00 37.03 2.74
1874 2100 9.112725 CTTGTCATTGAAATGGATGTATGTAGA 57.887 33.333 3.31 0.00 37.03 2.59
1875 2101 9.631257 TTGTCATTGAAATGGATGTATGTAGAT 57.369 29.630 3.31 0.00 37.03 1.98
1909 2135 8.717717 AGTTCTAGATACATCCATTTTCATCCA 58.282 33.333 0.00 0.00 0.00 3.41
1910 2136 9.512588 GTTCTAGATACATCCATTTTCATCCAT 57.487 33.333 0.00 0.00 0.00 3.41
1915 2141 9.204337 AGATACATCCATTTTCATCCATTTTGA 57.796 29.630 0.00 0.00 0.00 2.69
1916 2142 9.991906 GATACATCCATTTTCATCCATTTTGAT 57.008 29.630 0.00 0.00 0.00 2.57
1917 2143 9.772973 ATACATCCATTTTCATCCATTTTGATG 57.227 29.630 0.00 0.00 42.84 3.07
1929 2155 8.469200 TCATCCATTTTGATGACAAGTAATTCC 58.531 33.333 0.00 0.00 44.65 3.01
1930 2156 6.851609 TCCATTTTGATGACAAGTAATTCCG 58.148 36.000 0.00 0.00 37.32 4.30
1931 2157 6.035843 CCATTTTGATGACAAGTAATTCCGG 58.964 40.000 0.00 0.00 37.32 5.14
1932 2158 6.127758 CCATTTTGATGACAAGTAATTCCGGA 60.128 38.462 0.00 0.00 37.32 5.14
1933 2159 5.873179 TTTGATGACAAGTAATTCCGGAC 57.127 39.130 1.83 0.00 37.32 4.79
1934 2160 3.517602 TGATGACAAGTAATTCCGGACG 58.482 45.455 1.83 0.00 0.00 4.79
1935 2161 2.373540 TGACAAGTAATTCCGGACGG 57.626 50.000 1.83 3.96 0.00 4.79
1936 2162 1.894466 TGACAAGTAATTCCGGACGGA 59.106 47.619 1.83 9.76 43.52 4.69
1937 2163 2.094390 TGACAAGTAATTCCGGACGGAG 60.094 50.000 13.64 3.15 46.06 4.63
1938 2164 1.206371 ACAAGTAATTCCGGACGGAGG 59.794 52.381 13.64 0.00 46.06 4.30
1939 2165 0.828677 AAGTAATTCCGGACGGAGGG 59.171 55.000 13.64 0.00 46.06 4.30
1940 2166 0.032813 AGTAATTCCGGACGGAGGGA 60.033 55.000 13.64 0.00 46.06 4.20
1941 2167 0.388294 GTAATTCCGGACGGAGGGAG 59.612 60.000 13.64 0.00 46.06 4.30
1942 2168 0.032813 TAATTCCGGACGGAGGGAGT 60.033 55.000 13.64 1.45 46.06 3.85
1943 2169 0.032813 AATTCCGGACGGAGGGAGTA 60.033 55.000 13.64 0.00 46.06 2.59
1944 2170 0.754587 ATTCCGGACGGAGGGAGTAC 60.755 60.000 13.64 0.00 46.06 2.73
1945 2171 1.856539 TTCCGGACGGAGGGAGTACT 61.857 60.000 13.64 0.00 46.06 2.73
1946 2172 1.379576 CCGGACGGAGGGAGTACTT 60.380 63.158 4.40 0.00 37.50 2.24
1947 2173 0.969409 CCGGACGGAGGGAGTACTTT 60.969 60.000 4.40 0.00 37.50 2.66
1948 2174 0.455005 CGGACGGAGGGAGTACTTTC 59.545 60.000 0.00 0.00 0.00 2.62
1962 2188 5.544176 GGAGTACTTTCTGGATGGATGGATA 59.456 44.000 0.00 0.00 0.00 2.59
1976 2202 3.764434 GGATGGATAGATACCTTGAGCGA 59.236 47.826 0.00 0.00 0.00 4.93
1987 2213 7.316640 AGATACCTTGAGCGATTCACATATAC 58.683 38.462 0.00 0.00 34.94 1.47
1988 2214 4.299155 ACCTTGAGCGATTCACATATACG 58.701 43.478 0.00 0.00 34.94 3.06
2059 2285 6.706270 ACCATCATGAACTCGAATATTACACC 59.294 38.462 0.00 0.00 0.00 4.16
2229 2459 5.174035 CGCATTCAACGAGAATACCTAAGAG 59.826 44.000 7.36 0.00 45.06 2.85
2238 2468 9.557061 AACGAGAATACCTAAGAGAAAAGTTTT 57.443 29.630 0.00 0.00 0.00 2.43
2256 2486 6.749036 AGTTTTCTACTATCAGGGTATGGG 57.251 41.667 0.00 0.00 34.56 4.00
2271 2501 3.397955 GGTATGGGTATGGGTGGAAGAAT 59.602 47.826 0.00 0.00 0.00 2.40
2305 2535 4.481930 TTGGTTGACAATCGATGTTCAC 57.518 40.909 0.00 1.17 44.12 3.18
2315 2545 5.894763 ACAATCGATGTTCACCGAAATTTCG 60.895 40.000 29.28 29.28 44.50 3.46
2345 2575 2.493278 GGGTTGACCATTGATGTTCCAG 59.507 50.000 2.12 0.00 39.85 3.86
2347 2577 2.821969 GTTGACCATTGATGTTCCAGCT 59.178 45.455 0.00 0.00 0.00 4.24
2370 2600 6.469275 GCTTTTTGGCGTGTATTCTAATCTTC 59.531 38.462 0.00 0.00 0.00 2.87
2412 2645 6.984474 TGTTAATGCTCCTTTCTATCTAACGG 59.016 38.462 0.00 0.00 0.00 4.44
2429 2662 2.661718 ACGGTTTTTGATGGAACCTGT 58.338 42.857 4.03 1.60 42.46 4.00
2475 2708 3.071602 GTGGCCATAGAAAGAGCAGGATA 59.928 47.826 9.72 0.00 0.00 2.59
2477 2710 5.046304 GTGGCCATAGAAAGAGCAGGATATA 60.046 44.000 9.72 0.00 0.00 0.86
2515 2748 2.591923 TGGACTGGTTGCTGCATTTTA 58.408 42.857 1.84 0.00 0.00 1.52
2519 2752 4.379499 GGACTGGTTGCTGCATTTTAGTAC 60.379 45.833 1.84 3.37 0.00 2.73
2520 2753 4.398319 ACTGGTTGCTGCATTTTAGTACT 58.602 39.130 1.84 0.00 0.00 2.73
2539 2772 7.609760 AGTACTGCATCGTGATTATTCAAAA 57.390 32.000 0.00 0.00 32.48 2.44
2540 2773 7.688372 AGTACTGCATCGTGATTATTCAAAAG 58.312 34.615 0.00 0.00 32.48 2.27
2541 2774 6.500684 ACTGCATCGTGATTATTCAAAAGT 57.499 33.333 0.00 0.00 32.48 2.66
2543 2776 8.039603 ACTGCATCGTGATTATTCAAAAGTAA 57.960 30.769 0.00 0.00 32.48 2.24
2544 2777 8.677300 ACTGCATCGTGATTATTCAAAAGTAAT 58.323 29.630 0.00 0.00 32.48 1.89
2546 2779 9.929722 TGCATCGTGATTATTCAAAAGTAATAC 57.070 29.630 0.00 0.00 32.48 1.89
2547 2780 9.929722 GCATCGTGATTATTCAAAAGTAATACA 57.070 29.630 0.00 0.00 32.48 2.29
2556 2789 7.829378 ATTCAAAAGTAATACACTCTCGACC 57.171 36.000 0.00 0.00 36.04 4.79
2557 2790 5.396484 TCAAAAGTAATACACTCTCGACCG 58.604 41.667 0.00 0.00 36.04 4.79
2558 2791 5.181811 TCAAAAGTAATACACTCTCGACCGA 59.818 40.000 0.00 0.00 36.04 4.69
2559 2792 5.831702 AAAGTAATACACTCTCGACCGAT 57.168 39.130 0.00 0.00 36.04 4.18
2560 2793 5.831702 AAGTAATACACTCTCGACCGATT 57.168 39.130 0.00 0.00 36.04 3.34
2561 2794 5.421212 AGTAATACACTCTCGACCGATTC 57.579 43.478 0.00 0.00 28.33 2.52
2562 2795 4.880120 AGTAATACACTCTCGACCGATTCA 59.120 41.667 0.00 0.00 28.33 2.57
2563 2796 4.920640 AATACACTCTCGACCGATTCAT 57.079 40.909 0.00 0.00 0.00 2.57
2564 2797 4.920640 ATACACTCTCGACCGATTCATT 57.079 40.909 0.00 0.00 0.00 2.57
2565 2798 3.594603 ACACTCTCGACCGATTCATTT 57.405 42.857 0.00 0.00 0.00 2.32
2566 2799 3.926616 ACACTCTCGACCGATTCATTTT 58.073 40.909 0.00 0.00 0.00 1.82
2567 2800 3.679980 ACACTCTCGACCGATTCATTTTG 59.320 43.478 0.00 0.00 0.00 2.44
2568 2801 3.679980 CACTCTCGACCGATTCATTTTGT 59.320 43.478 0.00 0.00 0.00 2.83
2569 2802 3.679980 ACTCTCGACCGATTCATTTTGTG 59.320 43.478 0.00 0.00 0.00 3.33
2570 2803 3.920446 TCTCGACCGATTCATTTTGTGA 58.080 40.909 0.00 0.00 34.25 3.58
2571 2804 4.503910 TCTCGACCGATTCATTTTGTGAT 58.496 39.130 0.00 0.00 36.54 3.06
2572 2805 4.329801 TCTCGACCGATTCATTTTGTGATG 59.670 41.667 0.00 0.00 36.54 3.07
2573 2806 3.373748 TCGACCGATTCATTTTGTGATGG 59.626 43.478 0.00 0.00 36.54 3.51
2574 2807 3.126858 CGACCGATTCATTTTGTGATGGT 59.873 43.478 0.00 0.00 38.89 3.55
2575 2808 4.662145 GACCGATTCATTTTGTGATGGTC 58.338 43.478 8.09 8.09 42.05 4.02
2576 2809 4.078537 ACCGATTCATTTTGTGATGGTCA 58.921 39.130 0.00 0.00 34.14 4.02
2577 2810 4.522405 ACCGATTCATTTTGTGATGGTCAA 59.478 37.500 0.00 0.00 34.14 3.18
2578 2811 5.185635 ACCGATTCATTTTGTGATGGTCAAT 59.814 36.000 0.00 0.00 34.14 2.57
2579 2812 5.517411 CCGATTCATTTTGTGATGGTCAATG 59.483 40.000 0.00 0.00 36.54 2.82
2580 2813 5.005012 CGATTCATTTTGTGATGGTCAATGC 59.995 40.000 0.00 0.00 36.54 3.56
2581 2814 4.868314 TCATTTTGTGATGGTCAATGCA 57.132 36.364 0.00 0.00 0.00 3.96
2582 2815 4.558178 TCATTTTGTGATGGTCAATGCAC 58.442 39.130 0.00 0.00 0.00 4.57
2583 2816 4.281435 TCATTTTGTGATGGTCAATGCACT 59.719 37.500 0.00 0.00 32.69 4.40
2584 2817 3.921119 TTTGTGATGGTCAATGCACTC 57.079 42.857 0.00 0.00 32.69 3.51
2585 2818 2.565046 TGTGATGGTCAATGCACTCA 57.435 45.000 0.00 0.00 32.69 3.41
2586 2819 2.861274 TGTGATGGTCAATGCACTCAA 58.139 42.857 0.00 0.00 32.69 3.02
2587 2820 3.220940 TGTGATGGTCAATGCACTCAAA 58.779 40.909 0.00 0.00 32.69 2.69
2588 2821 3.635836 TGTGATGGTCAATGCACTCAAAA 59.364 39.130 0.00 0.00 32.69 2.44
2589 2822 4.232221 GTGATGGTCAATGCACTCAAAAG 58.768 43.478 0.00 0.00 0.00 2.27
2590 2823 3.890756 TGATGGTCAATGCACTCAAAAGT 59.109 39.130 0.00 0.00 35.60 2.66
2591 2824 4.341806 TGATGGTCAATGCACTCAAAAGTT 59.658 37.500 0.00 0.00 31.71 2.66
2592 2825 5.534278 TGATGGTCAATGCACTCAAAAGTTA 59.466 36.000 0.00 0.00 31.71 2.24
2593 2826 6.209192 TGATGGTCAATGCACTCAAAAGTTAT 59.791 34.615 0.00 0.00 31.71 1.89
2594 2827 7.392953 TGATGGTCAATGCACTCAAAAGTTATA 59.607 33.333 0.00 0.00 31.71 0.98
2595 2828 6.908825 TGGTCAATGCACTCAAAAGTTATAC 58.091 36.000 0.00 0.00 31.71 1.47
2596 2829 6.488344 TGGTCAATGCACTCAAAAGTTATACA 59.512 34.615 0.00 0.00 31.71 2.29
2597 2830 6.801862 GGTCAATGCACTCAAAAGTTATACAC 59.198 38.462 0.00 0.00 31.71 2.90
2598 2831 7.359595 GTCAATGCACTCAAAAGTTATACACA 58.640 34.615 0.00 0.00 31.71 3.72
2599 2832 7.323656 GTCAATGCACTCAAAAGTTATACACAC 59.676 37.037 0.00 0.00 31.71 3.82
2618 2851 4.911610 CACACTTGTTGACCGATTCATTTC 59.088 41.667 0.00 0.00 32.84 2.17
2631 2864 7.851508 ACCGATTCATTTCGTGATAGTTAATG 58.148 34.615 0.00 0.00 36.54 1.90
2633 2866 6.792250 CGATTCATTTCGTGATAGTTAATGCC 59.208 38.462 0.00 0.00 36.54 4.40
2634 2867 6.371809 TTCATTTCGTGATAGTTAATGCCC 57.628 37.500 0.00 0.00 36.54 5.36
2642 2875 5.475719 GTGATAGTTAATGCCCTGCGTATA 58.524 41.667 0.00 0.00 0.00 1.47
2643 2876 6.106673 GTGATAGTTAATGCCCTGCGTATAT 58.893 40.000 0.00 0.00 0.00 0.86
2644 2877 7.262772 GTGATAGTTAATGCCCTGCGTATATA 58.737 38.462 0.00 0.00 0.00 0.86
2646 2879 9.138596 TGATAGTTAATGCCCTGCGTATATATA 57.861 33.333 0.00 0.00 0.00 0.86
2649 2882 8.888579 AGTTAATGCCCTGCGTATATATATTC 57.111 34.615 0.00 0.00 0.00 1.75
2655 2888 5.563085 GCCCTGCGTATATATATTCCTCTCG 60.563 48.000 0.00 0.00 0.00 4.04
2662 2895 8.065407 GCGTATATATATTCCTCTCGAGTTGAG 58.935 40.741 13.13 0.29 46.72 3.02
2677 2910 4.122776 GAGTTGAGCTTCACTGACTTTGA 58.877 43.478 3.56 0.00 0.00 2.69
2680 2913 3.722147 TGAGCTTCACTGACTTTGACTC 58.278 45.455 0.00 0.00 0.00 3.36
2687 2920 6.037172 GCTTCACTGACTTTGACTCAGTTTAA 59.963 38.462 0.00 0.00 44.97 1.52
2688 2921 7.539712 TTCACTGACTTTGACTCAGTTTAAG 57.460 36.000 0.00 0.00 44.97 1.85
2689 2922 6.873997 TCACTGACTTTGACTCAGTTTAAGA 58.126 36.000 6.81 0.00 44.97 2.10
2740 2982 7.276438 TCTCGTGATGAATCTAGTGTTGATTTG 59.724 37.037 0.00 0.00 34.67 2.32
2741 2983 6.313658 TCGTGATGAATCTAGTGTTGATTTGG 59.686 38.462 0.00 0.00 34.67 3.28
2748 2990 9.031537 TGAATCTAGTGTTGATTTGGTACTCTA 57.968 33.333 0.00 0.00 34.67 2.43
2758 3000 7.348080 TGATTTGGTACTCTAGATGTTCGAT 57.652 36.000 0.00 0.00 0.00 3.59
2761 3003 7.876936 TTTGGTACTCTAGATGTTCGATACT 57.123 36.000 0.00 0.00 0.00 2.12
2783 3025 3.492102 TTTTTCTACTCTGCTGGTGCT 57.508 42.857 0.00 0.00 40.48 4.40
2796 3144 5.104360 TCTGCTGGTGCTTTAGGAATCTTAT 60.104 40.000 0.00 0.00 40.48 1.73
2797 3145 5.509498 TGCTGGTGCTTTAGGAATCTTATT 58.491 37.500 0.00 0.00 40.48 1.40
2798 3146 6.658849 TGCTGGTGCTTTAGGAATCTTATTA 58.341 36.000 0.00 0.00 40.48 0.98
2812 3160 6.072452 GGAATCTTATTAGGTGGTGCATTAGC 60.072 42.308 0.00 0.00 42.57 3.09
2879 3277 1.533625 TTTGGGGCAGAGTGATTTCG 58.466 50.000 0.00 0.00 0.00 3.46
2885 3283 0.749454 GCAGAGTGATTTCGGGGCAT 60.749 55.000 0.00 0.00 0.00 4.40
2905 3303 5.234116 GGCATGGTTCTGTTACAAAAACTTG 59.766 40.000 9.22 4.62 0.00 3.16
2906 3304 5.810074 GCATGGTTCTGTTACAAAAACTTGT 59.190 36.000 4.66 0.00 38.85 3.16
2931 3329 9.717942 GTACTATTCTATGAAATCAAGCCAGAT 57.282 33.333 0.00 0.00 0.00 2.90
2938 3336 9.494271 TCTATGAAATCAAGCCAGATTATACAC 57.506 33.333 2.07 0.00 37.24 2.90
2939 3337 9.276590 CTATGAAATCAAGCCAGATTATACACA 57.723 33.333 2.07 0.00 37.24 3.72
2940 3338 7.936496 TGAAATCAAGCCAGATTATACACAA 57.064 32.000 2.07 0.00 37.24 3.33
2941 3339 8.347004 TGAAATCAAGCCAGATTATACACAAA 57.653 30.769 2.07 0.00 37.24 2.83
2942 3340 8.970020 TGAAATCAAGCCAGATTATACACAAAT 58.030 29.630 2.07 0.00 37.24 2.32
2943 3341 9.807649 GAAATCAAGCCAGATTATACACAAATT 57.192 29.630 2.07 0.00 37.24 1.82
2945 3343 9.807649 AATCAAGCCAGATTATACACAAATTTC 57.192 29.630 0.00 0.00 36.51 2.17
2946 3344 8.347004 TCAAGCCAGATTATACACAAATTTCA 57.653 30.769 0.00 0.00 0.00 2.69
2947 3345 8.970020 TCAAGCCAGATTATACACAAATTTCAT 58.030 29.630 0.00 0.00 0.00 2.57
2948 3346 9.241317 CAAGCCAGATTATACACAAATTTCATC 57.759 33.333 0.00 0.00 0.00 2.92
2954 3352 8.916062 AGATTATACACAAATTTCATCATGCCA 58.084 29.630 0.00 0.00 0.00 4.92
2961 3359 9.537192 ACACAAATTTCATCATGCCAATATAAG 57.463 29.630 0.00 0.00 0.00 1.73
2999 3397 9.634163 CTTCGTTTTACCAAATAATAAAGCCTT 57.366 29.630 0.00 0.00 0.00 4.35
3076 3479 9.209175 GTAAAAATATACTCTAGATGCACCAGG 57.791 37.037 0.00 0.00 0.00 4.45
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
2 3 1.738099 GCCAGCCTACACGACACTG 60.738 63.158 0.00 0.00 0.00 3.66
4 5 1.446272 GAGCCAGCCTACACGACAC 60.446 63.158 0.00 0.00 0.00 3.67
6 7 2.184579 GGAGCCAGCCTACACGAC 59.815 66.667 0.00 0.00 0.00 4.34
8 9 2.185350 CAGGAGCCAGCCTACACG 59.815 66.667 0.00 0.00 36.22 4.49
9 10 2.586792 CCAGGAGCCAGCCTACAC 59.413 66.667 0.00 0.00 36.22 2.90
10 11 2.176202 TACCCAGGAGCCAGCCTACA 62.176 60.000 0.00 0.00 36.22 2.74
11 12 0.764752 ATACCCAGGAGCCAGCCTAC 60.765 60.000 0.00 0.00 36.22 3.18
12 13 0.764369 CATACCCAGGAGCCAGCCTA 60.764 60.000 0.00 0.00 36.22 3.93
13 14 2.074948 CATACCCAGGAGCCAGCCT 61.075 63.158 0.00 0.00 39.37 4.58
14 15 2.072487 TCATACCCAGGAGCCAGCC 61.072 63.158 0.00 0.00 0.00 4.85
15 16 1.147153 GTCATACCCAGGAGCCAGC 59.853 63.158 0.00 0.00 0.00 4.85
16 17 0.982852 TGGTCATACCCAGGAGCCAG 60.983 60.000 0.00 0.00 37.50 4.85
17 18 0.982852 CTGGTCATACCCAGGAGCCA 60.983 60.000 0.00 0.00 46.89 4.75
18 19 1.832912 CTGGTCATACCCAGGAGCC 59.167 63.158 0.00 0.00 46.89 4.70
24 25 1.471119 GACTCGTCTGGTCATACCCA 58.529 55.000 0.00 0.00 37.50 4.51
25 26 0.381089 CGACTCGTCTGGTCATACCC 59.619 60.000 0.00 0.00 37.50 3.69
26 27 1.093159 ACGACTCGTCTGGTCATACC 58.907 55.000 0.00 0.00 33.69 2.73
27 28 1.467734 ACACGACTCGTCTGGTCATAC 59.532 52.381 0.00 0.00 38.32 2.39
28 29 1.467342 CACACGACTCGTCTGGTCATA 59.533 52.381 0.00 0.00 38.32 2.15
29 30 0.241213 CACACGACTCGTCTGGTCAT 59.759 55.000 0.00 0.00 38.32 3.06
30 31 1.652563 CACACGACTCGTCTGGTCA 59.347 57.895 0.00 0.00 38.32 4.02
31 32 1.081376 CCACACGACTCGTCTGGTC 60.081 63.158 15.64 0.00 40.17 4.02
32 33 3.039988 CCACACGACTCGTCTGGT 58.960 61.111 15.64 2.91 40.17 4.00
34 35 1.440518 CGACCACACGACTCGTCTG 60.441 63.158 0.00 0.00 38.32 3.51
35 36 2.614446 CCGACCACACGACTCGTCT 61.614 63.158 0.00 0.00 38.32 4.18
36 37 2.126965 CCGACCACACGACTCGTC 60.127 66.667 0.00 0.00 38.32 4.20
37 38 3.667282 CCCGACCACACGACTCGT 61.667 66.667 0.00 0.00 42.36 4.18
38 39 3.667282 ACCCGACCACACGACTCG 61.667 66.667 0.00 0.00 35.09 4.18
39 40 2.049433 CACCCGACCACACGACTC 60.049 66.667 0.00 0.00 35.09 3.36
40 41 2.836360 ACACCCGACCACACGACT 60.836 61.111 0.00 0.00 35.09 4.18
41 42 2.355481 GACACCCGACCACACGAC 60.355 66.667 0.00 0.00 35.09 4.34
42 43 3.608662 GGACACCCGACCACACGA 61.609 66.667 0.00 0.00 35.09 4.35
43 44 2.725203 AATGGACACCCGACCACACG 62.725 60.000 0.00 0.00 39.84 4.49
44 45 1.072505 AATGGACACCCGACCACAC 59.927 57.895 0.00 0.00 39.84 3.82
45 46 1.072332 CAATGGACACCCGACCACA 59.928 57.895 0.00 0.00 39.84 4.17
46 47 0.953960 GACAATGGACACCCGACCAC 60.954 60.000 0.00 0.00 39.84 4.16
47 48 1.373435 GACAATGGACACCCGACCA 59.627 57.895 0.00 0.00 41.30 4.02
48 49 1.740296 CGACAATGGACACCCGACC 60.740 63.158 0.00 0.00 34.29 4.79
49 50 1.005394 ACGACAATGGACACCCGAC 60.005 57.895 0.00 0.00 34.29 4.79
50 51 1.290955 GACGACAATGGACACCCGA 59.709 57.895 0.00 0.00 34.29 5.14
51 52 1.005512 TGACGACAATGGACACCCG 60.006 57.895 0.00 0.00 34.29 5.28
52 53 0.250124 TGTGACGACAATGGACACCC 60.250 55.000 0.00 0.00 0.00 4.61
53 54 0.865769 GTGTGACGACAATGGACACC 59.134 55.000 0.00 0.00 32.49 4.16
54 55 0.506932 CGTGTGACGACAATGGACAC 59.493 55.000 0.00 0.00 46.05 3.67
55 56 0.103390 ACGTGTGACGACAATGGACA 59.897 50.000 2.62 0.00 46.05 4.02
56 57 0.506932 CACGTGTGACGACAATGGAC 59.493 55.000 7.58 0.00 46.05 4.02
57 58 0.103390 ACACGTGTGACGACAATGGA 59.897 50.000 22.71 0.00 46.05 3.41
58 59 2.600388 ACACGTGTGACGACAATGG 58.400 52.632 22.71 0.00 46.05 3.16
68 69 3.584834 TCTGATATTCACCACACGTGTG 58.415 45.455 36.13 36.13 43.51 3.82
69 70 3.258372 ACTCTGATATTCACCACACGTGT 59.742 43.478 17.22 17.22 43.51 4.49
70 71 3.849911 ACTCTGATATTCACCACACGTG 58.150 45.455 15.48 15.48 44.50 4.49
71 72 3.119101 GGACTCTGATATTCACCACACGT 60.119 47.826 0.00 0.00 0.00 4.49
72 73 3.119137 TGGACTCTGATATTCACCACACG 60.119 47.826 0.00 0.00 0.00 4.49
73 74 4.471904 TGGACTCTGATATTCACCACAC 57.528 45.455 0.00 0.00 0.00 3.82
74 75 4.777366 TCTTGGACTCTGATATTCACCACA 59.223 41.667 0.00 0.00 0.00 4.17
75 76 5.344743 TCTTGGACTCTGATATTCACCAC 57.655 43.478 0.00 0.00 0.00 4.16
76 77 6.373005 TTTCTTGGACTCTGATATTCACCA 57.627 37.500 0.00 0.00 0.00 4.17
77 78 8.964476 TTATTTCTTGGACTCTGATATTCACC 57.036 34.615 0.00 0.00 0.00 4.02
84 85 9.745018 TTCATCTTTTATTTCTTGGACTCTGAT 57.255 29.630 0.00 0.00 0.00 2.90
85 86 9.573166 TTTCATCTTTTATTTCTTGGACTCTGA 57.427 29.630 0.00 0.00 0.00 3.27
86 87 9.837525 CTTTCATCTTTTATTTCTTGGACTCTG 57.162 33.333 0.00 0.00 0.00 3.35
87 88 9.579932 ACTTTCATCTTTTATTTCTTGGACTCT 57.420 29.630 0.00 0.00 0.00 3.24
101 102 9.899226 GTTGCTTGTCTAATACTTTCATCTTTT 57.101 29.630 0.00 0.00 0.00 2.27
102 103 9.289782 AGTTGCTTGTCTAATACTTTCATCTTT 57.710 29.630 0.00 0.00 0.00 2.52
103 104 8.854614 AGTTGCTTGTCTAATACTTTCATCTT 57.145 30.769 0.00 0.00 0.00 2.40
104 105 8.097038 TGAGTTGCTTGTCTAATACTTTCATCT 58.903 33.333 0.00 0.00 0.00 2.90
105 106 8.256611 TGAGTTGCTTGTCTAATACTTTCATC 57.743 34.615 0.00 0.00 0.00 2.92
106 107 8.097038 TCTGAGTTGCTTGTCTAATACTTTCAT 58.903 33.333 0.00 0.00 0.00 2.57
107 108 7.441836 TCTGAGTTGCTTGTCTAATACTTTCA 58.558 34.615 0.00 0.00 0.00 2.69
108 109 7.891183 TCTGAGTTGCTTGTCTAATACTTTC 57.109 36.000 0.00 0.00 0.00 2.62
109 110 8.725148 CATTCTGAGTTGCTTGTCTAATACTTT 58.275 33.333 0.00 0.00 0.00 2.66
110 111 7.880195 ACATTCTGAGTTGCTTGTCTAATACTT 59.120 33.333 0.00 0.00 0.00 2.24
111 112 7.390027 ACATTCTGAGTTGCTTGTCTAATACT 58.610 34.615 0.00 0.00 0.00 2.12
112 113 7.331934 TGACATTCTGAGTTGCTTGTCTAATAC 59.668 37.037 0.00 0.00 35.63 1.89
113 114 7.386059 TGACATTCTGAGTTGCTTGTCTAATA 58.614 34.615 0.00 0.00 35.63 0.98
114 115 6.233434 TGACATTCTGAGTTGCTTGTCTAAT 58.767 36.000 0.00 0.00 35.63 1.73
115 116 5.610398 TGACATTCTGAGTTGCTTGTCTAA 58.390 37.500 0.00 0.00 35.63 2.10
116 117 5.213891 TGACATTCTGAGTTGCTTGTCTA 57.786 39.130 0.00 0.00 35.63 2.59
117 118 4.077300 TGACATTCTGAGTTGCTTGTCT 57.923 40.909 0.00 0.00 35.63 3.41
118 119 4.818534 TTGACATTCTGAGTTGCTTGTC 57.181 40.909 0.00 0.00 35.27 3.18
119 120 4.883585 TCTTTGACATTCTGAGTTGCTTGT 59.116 37.500 0.00 0.00 0.00 3.16
120 121 5.428496 TCTTTGACATTCTGAGTTGCTTG 57.572 39.130 0.00 0.00 0.00 4.01
121 122 6.645790 ATTCTTTGACATTCTGAGTTGCTT 57.354 33.333 0.00 0.00 0.00 3.91
122 123 6.645790 AATTCTTTGACATTCTGAGTTGCT 57.354 33.333 0.00 0.00 0.00 3.91
123 124 7.061557 GCTTAATTCTTTGACATTCTGAGTTGC 59.938 37.037 0.00 0.00 0.00 4.17
124 125 8.077991 TGCTTAATTCTTTGACATTCTGAGTTG 58.922 33.333 0.00 0.00 0.00 3.16
125 126 8.169977 TGCTTAATTCTTTGACATTCTGAGTT 57.830 30.769 0.00 0.00 0.00 3.01
126 127 7.750229 TGCTTAATTCTTTGACATTCTGAGT 57.250 32.000 0.00 0.00 0.00 3.41
178 179 9.595823 GGCTGTAGTATGATGTTCTTTTTACTA 57.404 33.333 0.00 0.00 0.00 1.82
179 180 7.553044 GGGCTGTAGTATGATGTTCTTTTTACT 59.447 37.037 0.00 0.00 0.00 2.24
180 181 7.553044 AGGGCTGTAGTATGATGTTCTTTTTAC 59.447 37.037 0.00 0.00 0.00 2.01
181 182 7.630082 AGGGCTGTAGTATGATGTTCTTTTTA 58.370 34.615 0.00 0.00 0.00 1.52
182 183 6.485171 AGGGCTGTAGTATGATGTTCTTTTT 58.515 36.000 0.00 0.00 0.00 1.94
183 184 6.067217 AGGGCTGTAGTATGATGTTCTTTT 57.933 37.500 0.00 0.00 0.00 2.27
184 185 5.700402 AGGGCTGTAGTATGATGTTCTTT 57.300 39.130 0.00 0.00 0.00 2.52
185 186 5.431765 CAAGGGCTGTAGTATGATGTTCTT 58.568 41.667 0.00 0.00 0.00 2.52
186 187 4.141620 CCAAGGGCTGTAGTATGATGTTCT 60.142 45.833 0.00 0.00 0.00 3.01
187 188 4.130118 CCAAGGGCTGTAGTATGATGTTC 58.870 47.826 0.00 0.00 0.00 3.18
188 189 3.523564 ACCAAGGGCTGTAGTATGATGTT 59.476 43.478 0.00 0.00 0.00 2.71
189 190 3.115390 ACCAAGGGCTGTAGTATGATGT 58.885 45.455 0.00 0.00 0.00 3.06
190 191 3.845781 ACCAAGGGCTGTAGTATGATG 57.154 47.619 0.00 0.00 0.00 3.07
191 192 4.227300 TCAAACCAAGGGCTGTAGTATGAT 59.773 41.667 0.00 0.00 0.00 2.45
192 193 3.585289 TCAAACCAAGGGCTGTAGTATGA 59.415 43.478 0.00 0.00 0.00 2.15
193 194 3.950397 TCAAACCAAGGGCTGTAGTATG 58.050 45.455 0.00 0.00 0.00 2.39
194 195 4.385310 GGATCAAACCAAGGGCTGTAGTAT 60.385 45.833 0.00 0.00 0.00 2.12
195 196 3.054655 GGATCAAACCAAGGGCTGTAGTA 60.055 47.826 0.00 0.00 0.00 1.82
196 197 2.290960 GGATCAAACCAAGGGCTGTAGT 60.291 50.000 0.00 0.00 0.00 2.73
197 198 2.369394 GGATCAAACCAAGGGCTGTAG 58.631 52.381 0.00 0.00 0.00 2.74
198 199 1.339631 CGGATCAAACCAAGGGCTGTA 60.340 52.381 0.00 0.00 0.00 2.74
199 200 0.609131 CGGATCAAACCAAGGGCTGT 60.609 55.000 0.00 0.00 0.00 4.40
200 201 1.937546 GCGGATCAAACCAAGGGCTG 61.938 60.000 0.00 0.00 0.00 4.85
201 202 1.678970 GCGGATCAAACCAAGGGCT 60.679 57.895 0.00 0.00 0.00 5.19
202 203 1.678970 AGCGGATCAAACCAAGGGC 60.679 57.895 0.00 0.00 0.00 5.19
203 204 0.322456 TCAGCGGATCAAACCAAGGG 60.322 55.000 0.00 0.00 0.00 3.95
204 205 1.200020 GTTCAGCGGATCAAACCAAGG 59.800 52.381 0.00 0.00 0.00 3.61
205 206 1.879380 TGTTCAGCGGATCAAACCAAG 59.121 47.619 0.00 0.00 0.00 3.61
206 207 1.974265 TGTTCAGCGGATCAAACCAA 58.026 45.000 0.00 0.00 0.00 3.67
207 208 1.974265 TTGTTCAGCGGATCAAACCA 58.026 45.000 7.74 0.00 31.53 3.67
210 211 1.265635 CGGTTTGTTCAGCGGATCAAA 59.734 47.619 16.06 16.06 39.29 2.69
211 212 0.871722 CGGTTTGTTCAGCGGATCAA 59.128 50.000 6.29 6.29 33.97 2.57
212 213 1.573829 GCGGTTTGTTCAGCGGATCA 61.574 55.000 0.00 0.00 38.12 2.92
213 214 1.134694 GCGGTTTGTTCAGCGGATC 59.865 57.895 0.00 0.00 38.12 3.36
214 215 1.302511 AGCGGTTTGTTCAGCGGAT 60.303 52.632 0.00 0.00 38.12 4.18
215 216 2.110213 AGCGGTTTGTTCAGCGGA 59.890 55.556 0.00 0.00 38.12 5.54
216 217 2.252260 CAGCGGTTTGTTCAGCGG 59.748 61.111 0.00 0.00 38.12 5.52
217 218 2.252260 CCAGCGGTTTGTTCAGCG 59.748 61.111 0.00 0.00 40.67 5.18
218 219 2.644992 CCCAGCGGTTTGTTCAGC 59.355 61.111 0.00 0.00 0.00 4.26
219 220 2.268076 CCCCCAGCGGTTTGTTCAG 61.268 63.158 0.00 0.00 0.00 3.02
220 221 2.203422 CCCCCAGCGGTTTGTTCA 60.203 61.111 0.00 0.00 0.00 3.18
221 222 1.971695 CTCCCCCAGCGGTTTGTTC 60.972 63.158 0.00 0.00 0.00 3.18
222 223 2.115266 CTCCCCCAGCGGTTTGTT 59.885 61.111 0.00 0.00 0.00 2.83
223 224 4.660938 GCTCCCCCAGCGGTTTGT 62.661 66.667 0.00 0.00 38.76 2.83
230 231 4.468689 GTGTACCGCTCCCCCAGC 62.469 72.222 0.00 0.00 45.85 4.85
231 232 4.143333 CGTGTACCGCTCCCCCAG 62.143 72.222 0.00 0.00 0.00 4.45
234 235 3.152400 ATCCGTGTACCGCTCCCC 61.152 66.667 0.00 0.00 34.38 4.81
235 236 1.386525 TACATCCGTGTACCGCTCCC 61.387 60.000 0.00 0.00 39.77 4.30
236 237 2.109431 TACATCCGTGTACCGCTCC 58.891 57.895 0.00 0.00 39.77 4.70
243 244 1.097232 CGGACTGGTACATCCGTGTA 58.903 55.000 19.11 0.00 46.46 2.90
244 245 1.888018 CGGACTGGTACATCCGTGT 59.112 57.895 19.11 0.00 46.46 4.49
245 246 4.806571 CGGACTGGTACATCCGTG 57.193 61.111 19.11 0.00 46.46 4.94
248 249 1.090052 GCAAGCGGACTGGTACATCC 61.090 60.000 0.00 0.00 38.20 3.51
249 250 0.108138 AGCAAGCGGACTGGTACATC 60.108 55.000 0.00 0.00 38.20 3.06
250 251 0.324943 AAGCAAGCGGACTGGTACAT 59.675 50.000 0.00 0.00 38.20 2.29
251 252 0.970640 TAAGCAAGCGGACTGGTACA 59.029 50.000 0.00 0.00 0.00 2.90
252 253 2.088950 TTAAGCAAGCGGACTGGTAC 57.911 50.000 0.00 0.00 0.00 3.34
253 254 2.843401 TTTAAGCAAGCGGACTGGTA 57.157 45.000 0.00 0.00 0.00 3.25
254 255 2.084546 GATTTAAGCAAGCGGACTGGT 58.915 47.619 0.00 0.00 0.00 4.00
255 256 1.401905 GGATTTAAGCAAGCGGACTGG 59.598 52.381 0.00 0.00 0.00 4.00
256 257 2.083774 TGGATTTAAGCAAGCGGACTG 58.916 47.619 0.00 0.00 0.00 3.51
257 258 2.290323 ACTGGATTTAAGCAAGCGGACT 60.290 45.455 0.00 0.00 0.00 3.85
258 259 2.084546 ACTGGATTTAAGCAAGCGGAC 58.915 47.619 0.00 0.00 0.00 4.79
259 260 2.489938 ACTGGATTTAAGCAAGCGGA 57.510 45.000 0.00 0.00 0.00 5.54
260 261 4.900635 ATAACTGGATTTAAGCAAGCGG 57.099 40.909 0.00 0.00 0.00 5.52
261 262 6.430451 CCTAATAACTGGATTTAAGCAAGCG 58.570 40.000 0.00 0.00 0.00 4.68
262 263 6.546034 TCCCTAATAACTGGATTTAAGCAAGC 59.454 38.462 0.00 0.00 0.00 4.01
263 264 8.519799 TTCCCTAATAACTGGATTTAAGCAAG 57.480 34.615 0.00 0.00 0.00 4.01
264 265 8.887264 TTTCCCTAATAACTGGATTTAAGCAA 57.113 30.769 0.00 0.00 0.00 3.91
265 266 8.912988 CATTTCCCTAATAACTGGATTTAAGCA 58.087 33.333 0.00 0.00 0.00 3.91
266 267 7.867909 GCATTTCCCTAATAACTGGATTTAAGC 59.132 37.037 0.00 0.00 0.00 3.09
267 268 9.136323 AGCATTTCCCTAATAACTGGATTTAAG 57.864 33.333 0.00 0.00 0.00 1.85
268 269 8.912988 CAGCATTTCCCTAATAACTGGATTTAA 58.087 33.333 0.00 0.00 31.04 1.52
269 270 7.014230 GCAGCATTTCCCTAATAACTGGATTTA 59.986 37.037 0.00 0.00 33.40 1.40
270 271 6.183360 GCAGCATTTCCCTAATAACTGGATTT 60.183 38.462 0.00 0.00 33.40 2.17
271 272 5.302823 GCAGCATTTCCCTAATAACTGGATT 59.697 40.000 0.00 0.00 33.40 3.01
272 273 4.829492 GCAGCATTTCCCTAATAACTGGAT 59.171 41.667 0.00 0.00 33.40 3.41
273 274 4.207165 GCAGCATTTCCCTAATAACTGGA 58.793 43.478 0.00 0.00 33.40 3.86
274 275 3.003689 CGCAGCATTTCCCTAATAACTGG 59.996 47.826 0.00 0.00 33.40 4.00
275 276 4.214980 CGCAGCATTTCCCTAATAACTG 57.785 45.455 0.00 0.00 34.79 3.16
296 297 0.744414 ATATGGTGCACCGTGTGAGC 60.744 55.000 35.93 9.58 39.43 4.26
297 298 1.737838 AATATGGTGCACCGTGTGAG 58.262 50.000 35.93 0.00 39.43 3.51
298 299 2.080693 GAAATATGGTGCACCGTGTGA 58.919 47.619 35.93 20.02 39.43 3.58
299 300 1.809547 TGAAATATGGTGCACCGTGTG 59.190 47.619 35.93 0.25 39.43 3.82
300 301 2.192664 TGAAATATGGTGCACCGTGT 57.807 45.000 35.93 28.69 39.43 4.49
301 302 3.190327 TCTTTGAAATATGGTGCACCGTG 59.810 43.478 35.93 19.04 39.43 4.94
302 303 3.417101 TCTTTGAAATATGGTGCACCGT 58.583 40.909 32.30 32.30 39.43 4.83
303 304 4.353737 CATCTTTGAAATATGGTGCACCG 58.646 43.478 30.07 12.23 39.43 4.94
304 305 4.114794 GCATCTTTGAAATATGGTGCACC 58.885 43.478 29.67 29.67 0.00 5.01
305 306 4.746729 TGCATCTTTGAAATATGGTGCAC 58.253 39.130 8.80 8.80 36.54 4.57
306 307 5.601583 ATGCATCTTTGAAATATGGTGCA 57.398 34.783 6.13 6.13 44.24 4.57
307 308 9.865321 ATAATATGCATCTTTGAAATATGGTGC 57.135 29.630 0.19 0.49 0.00 5.01
344 345 9.777297 AATTTTTATTGTGTCTTAGCAACCATT 57.223 25.926 0.00 0.00 0.00 3.16
345 346 9.423061 GAATTTTTATTGTGTCTTAGCAACCAT 57.577 29.630 0.00 0.00 0.00 3.55
346 347 8.417106 TGAATTTTTATTGTGTCTTAGCAACCA 58.583 29.630 0.00 0.00 0.00 3.67
347 348 8.810652 TGAATTTTTATTGTGTCTTAGCAACC 57.189 30.769 0.00 0.00 0.00 3.77
350 351 9.844790 CTGATGAATTTTTATTGTGTCTTAGCA 57.155 29.630 0.00 0.00 0.00 3.49
355 356 9.903682 CTTGTCTGATGAATTTTTATTGTGTCT 57.096 29.630 0.00 0.00 0.00 3.41
356 357 9.132521 CCTTGTCTGATGAATTTTTATTGTGTC 57.867 33.333 0.00 0.00 0.00 3.67
357 358 8.090214 CCCTTGTCTGATGAATTTTTATTGTGT 58.910 33.333 0.00 0.00 0.00 3.72
358 359 7.063780 GCCCTTGTCTGATGAATTTTTATTGTG 59.936 37.037 0.00 0.00 0.00 3.33
359 360 7.099120 GCCCTTGTCTGATGAATTTTTATTGT 58.901 34.615 0.00 0.00 0.00 2.71
360 361 6.536224 GGCCCTTGTCTGATGAATTTTTATTG 59.464 38.462 0.00 0.00 0.00 1.90
361 362 6.352137 GGGCCCTTGTCTGATGAATTTTTATT 60.352 38.462 17.04 0.00 0.00 1.40
362 363 5.129320 GGGCCCTTGTCTGATGAATTTTTAT 59.871 40.000 17.04 0.00 0.00 1.40
363 364 4.466015 GGGCCCTTGTCTGATGAATTTTTA 59.534 41.667 17.04 0.00 0.00 1.52
364 365 3.261643 GGGCCCTTGTCTGATGAATTTTT 59.738 43.478 17.04 0.00 0.00 1.94
365 366 2.833943 GGGCCCTTGTCTGATGAATTTT 59.166 45.455 17.04 0.00 0.00 1.82
366 367 2.043526 AGGGCCCTTGTCTGATGAATTT 59.956 45.455 22.28 0.00 0.00 1.82
367 368 1.642762 AGGGCCCTTGTCTGATGAATT 59.357 47.619 22.28 0.00 0.00 2.17
368 369 1.302907 AGGGCCCTTGTCTGATGAAT 58.697 50.000 22.28 0.00 0.00 2.57
369 370 1.075601 AAGGGCCCTTGTCTGATGAA 58.924 50.000 36.80 0.00 34.60 2.57
370 371 0.329261 CAAGGGCCCTTGTCTGATGA 59.671 55.000 44.35 0.00 45.91 2.92
371 372 2.877975 CAAGGGCCCTTGTCTGATG 58.122 57.895 44.35 26.48 45.91 3.07
385 386 2.658679 TATCGCGGATGGCACCAAGG 62.659 60.000 6.13 0.00 43.84 3.61
386 387 0.603707 ATATCGCGGATGGCACCAAG 60.604 55.000 6.13 0.00 43.84 3.61
387 388 0.179032 AATATCGCGGATGGCACCAA 60.179 50.000 6.13 0.00 43.84 3.67
388 389 0.682292 TAATATCGCGGATGGCACCA 59.318 50.000 6.13 0.00 43.84 4.17
389 390 1.803334 TTAATATCGCGGATGGCACC 58.197 50.000 6.13 0.00 43.84 5.01
390 391 3.188460 ACAATTAATATCGCGGATGGCAC 59.812 43.478 6.13 0.00 43.84 5.01
391 392 3.188254 CACAATTAATATCGCGGATGGCA 59.812 43.478 6.13 0.00 43.84 4.92
392 393 3.747193 CACAATTAATATCGCGGATGGC 58.253 45.455 6.13 0.00 38.69 4.40
393 394 3.188254 TGCACAATTAATATCGCGGATGG 59.812 43.478 6.13 0.00 0.00 3.51
394 395 4.403015 TGCACAATTAATATCGCGGATG 57.597 40.909 6.13 0.00 0.00 3.51
395 396 4.694982 TCATGCACAATTAATATCGCGGAT 59.305 37.500 6.13 0.75 0.00 4.18
396 397 4.061596 TCATGCACAATTAATATCGCGGA 58.938 39.130 6.13 0.00 0.00 5.54
397 398 4.403015 TCATGCACAATTAATATCGCGG 57.597 40.909 6.13 0.00 0.00 6.46
398 399 5.384787 ACATCATGCACAATTAATATCGCG 58.615 37.500 0.00 0.00 0.00 5.87
399 400 6.857451 TCAACATCATGCACAATTAATATCGC 59.143 34.615 0.00 0.00 0.00 4.58
400 401 8.846607 CATCAACATCATGCACAATTAATATCG 58.153 33.333 0.00 0.00 0.00 2.92
401 402 9.902196 TCATCAACATCATGCACAATTAATATC 57.098 29.630 0.00 0.00 0.00 1.63
403 404 9.902196 GATCATCAACATCATGCACAATTAATA 57.098 29.630 0.00 0.00 0.00 0.98
404 405 8.638873 AGATCATCAACATCATGCACAATTAAT 58.361 29.630 0.00 0.00 0.00 1.40
405 406 8.002984 AGATCATCAACATCATGCACAATTAA 57.997 30.769 0.00 0.00 0.00 1.40
406 407 7.576861 AGATCATCAACATCATGCACAATTA 57.423 32.000 0.00 0.00 0.00 1.40
407 408 6.465439 AGATCATCAACATCATGCACAATT 57.535 33.333 0.00 0.00 0.00 2.32
408 409 6.096282 TGAAGATCATCAACATCATGCACAAT 59.904 34.615 0.00 0.00 0.00 2.71
409 410 5.416326 TGAAGATCATCAACATCATGCACAA 59.584 36.000 0.00 0.00 0.00 3.33
410 411 4.944930 TGAAGATCATCAACATCATGCACA 59.055 37.500 0.00 0.00 0.00 4.57
411 412 5.494632 TGAAGATCATCAACATCATGCAC 57.505 39.130 0.00 0.00 0.00 4.57
412 413 6.518208 TTTGAAGATCATCAACATCATGCA 57.482 33.333 12.70 0.00 38.95 3.96
413 414 9.524106 TTATTTTGAAGATCATCAACATCATGC 57.476 29.630 12.70 0.00 38.95 4.06
445 446 6.901857 TGGTACTTTCTTTTTCCCCCTAAAAA 59.098 34.615 0.00 0.00 36.30 1.94
446 447 6.442091 TGGTACTTTCTTTTTCCCCCTAAAA 58.558 36.000 0.00 0.00 0.00 1.52
447 448 6.028258 TGGTACTTTCTTTTTCCCCCTAAA 57.972 37.500 0.00 0.00 0.00 1.85
451 452 3.825014 GTCTGGTACTTTCTTTTTCCCCC 59.175 47.826 0.00 0.00 0.00 5.40
455 456 6.202226 CAGCTTGTCTGGTACTTTCTTTTTC 58.798 40.000 0.00 0.00 39.15 2.29
469 470 3.123620 GCTCCCGCAGCTTGTCTG 61.124 66.667 0.00 0.00 45.83 3.51
542 546 2.669569 ATGGTGCACCGTGTGAGC 60.670 61.111 29.84 4.04 39.43 4.26
572 576 2.596338 CGGGGCAAACGGGAACTT 60.596 61.111 0.00 0.00 0.00 2.66
590 594 3.858877 GCTTGCCTATGACCGTAGATGAG 60.859 52.174 0.00 0.00 0.00 2.90
617 621 4.838152 GCTCATCGCCGGGCTTGA 62.838 66.667 18.34 17.68 0.00 3.02
650 654 9.382244 CGAGAAGAATTTCAACGACTTTAAAAT 57.618 29.630 0.00 0.00 37.47 1.82
660 664 6.253727 ACAGCTATACGAGAAGAATTTCAACG 59.746 38.462 0.00 0.00 39.44 4.10
663 667 6.531594 CACACAGCTATACGAGAAGAATTTCA 59.468 38.462 0.00 0.00 35.70 2.69
699 703 3.366052 TTGGAGAAAAGGCTGGGTATC 57.634 47.619 0.00 0.00 0.00 2.24
701 705 3.603965 TTTTGGAGAAAAGGCTGGGTA 57.396 42.857 0.00 0.00 0.00 3.69
702 706 2.470057 TTTTGGAGAAAAGGCTGGGT 57.530 45.000 0.00 0.00 0.00 4.51
724 728 2.470057 TGAAAGGAGGCTGGGTTTTT 57.530 45.000 0.00 0.00 0.00 1.94
725 729 2.470057 TTGAAAGGAGGCTGGGTTTT 57.530 45.000 0.00 0.00 0.00 2.43
726 730 2.702270 ATTGAAAGGAGGCTGGGTTT 57.298 45.000 0.00 0.00 0.00 3.27
793 901 2.537401 CCTAGGGAAAACTCTAACGCG 58.463 52.381 3.53 3.53 0.00 6.01
868 1000 3.083600 CTGCGCGCTTAGGGTTTCG 62.084 63.158 33.29 3.62 34.93 3.46
906 1038 2.584418 CTCTGTCTGCGGCGATGG 60.584 66.667 12.98 0.00 0.00 3.51
949 1081 1.064758 TGGGAGAGACAGAGAGAGAGC 60.065 57.143 0.00 0.00 0.00 4.09
951 1083 1.988846 TGTGGGAGAGACAGAGAGAGA 59.011 52.381 0.00 0.00 0.00 3.10
953 1085 1.611936 CGTGTGGGAGAGACAGAGAGA 60.612 57.143 0.00 0.00 0.00 3.10
995 1162 3.880846 GCCAGAAAGCCATCGCCG 61.881 66.667 0.00 0.00 34.57 6.46
996 1163 2.751436 TGCCAGAAAGCCATCGCC 60.751 61.111 0.00 0.00 34.57 5.54
997 1164 2.768492 CCTGCCAGAAAGCCATCGC 61.768 63.158 0.00 0.00 0.00 4.58
1089 1256 2.433145 CGCTTGAAGCCGCAGAGA 60.433 61.111 12.13 0.00 38.18 3.10
1125 1292 2.121538 CGGGATCCGCAGAGACAGA 61.122 63.158 5.45 0.00 41.17 3.41
1153 1359 1.075536 AGGATGGTTGGGGTCAAGAAC 59.924 52.381 0.00 0.00 32.92 3.01
1161 1367 0.611896 GGACACAAGGATGGTTGGGG 60.612 60.000 0.00 0.00 34.92 4.96
1167 1373 0.680921 ATTGCCGGACACAAGGATGG 60.681 55.000 5.05 0.00 0.00 3.51
1180 1386 1.525995 ATTAGCCACGGGATTGCCG 60.526 57.895 15.64 15.64 33.83 5.69
1216 1433 2.348971 GCGAGTTTCTTTCCCTTCGATC 59.651 50.000 0.00 0.00 0.00 3.69
1261 1478 3.452264 TGACAGAGAGAGAGAGAGAGAGG 59.548 52.174 0.00 0.00 0.00 3.69
1274 1491 6.662616 ACAATTCGTTGATTTTGACAGAGAG 58.337 36.000 0.00 0.00 0.00 3.20
1275 1492 6.618287 ACAATTCGTTGATTTTGACAGAGA 57.382 33.333 0.00 0.00 0.00 3.10
1276 1493 6.360681 GGAACAATTCGTTGATTTTGACAGAG 59.639 38.462 0.00 0.00 38.19 3.35
1277 1494 6.183360 TGGAACAATTCGTTGATTTTGACAGA 60.183 34.615 0.00 0.00 38.19 3.41
1278 1495 5.976534 TGGAACAATTCGTTGATTTTGACAG 59.023 36.000 0.00 0.00 38.19 3.51
1279 1496 5.895928 TGGAACAATTCGTTGATTTTGACA 58.104 33.333 0.00 0.00 38.19 3.58
1296 1513 1.275291 CCTAGTTCTTCGCCTGGAACA 59.725 52.381 0.00 0.00 42.76 3.18
1323 1540 9.813826 AATTAGCCAAAGTATATAAGCCATTCT 57.186 29.630 0.00 0.00 0.00 2.40
1340 1557 4.332543 CGACACTGCAATCTAATTAGCCAA 59.667 41.667 7.67 0.00 0.00 4.52
1341 1558 3.871006 CGACACTGCAATCTAATTAGCCA 59.129 43.478 7.67 2.04 0.00 4.75
1436 1653 8.975410 TTGATGCATTCTTACAAAAGATTGAG 57.025 30.769 0.00 0.00 42.07 3.02
1476 1693 1.070038 GCATGCAATTTGTCCCGTTG 58.930 50.000 14.21 0.00 0.00 4.10
1479 1696 2.083167 AAAGCATGCAATTTGTCCCG 57.917 45.000 21.98 0.00 0.00 5.14
1480 1697 4.819769 TCTTAAAGCATGCAATTTGTCCC 58.180 39.130 21.98 0.00 0.00 4.46
1490 1708 9.095065 AGAAAATCATCAATTCTTAAAGCATGC 57.905 29.630 10.51 10.51 29.35 4.06
1532 1750 7.729124 AAGTATTAACAGTTCTAGGGTAGCA 57.271 36.000 0.00 0.00 0.00 3.49
1550 1769 9.480053 CCACAAGATCAAAATTGTCAAAGTATT 57.520 29.630 0.00 0.00 37.54 1.89
1593 1816 3.451178 GCAGGGTCTAGAATCAACAGGTA 59.549 47.826 0.00 0.00 0.00 3.08
1605 1829 0.105778 GCCAAGCTAGCAGGGTCTAG 59.894 60.000 22.88 3.45 39.17 2.43
1610 1834 3.837578 CATGCCAAGCTAGCAGGG 58.162 61.111 22.88 20.40 44.90 4.45
1650 1874 4.211794 GTGTTCCGGAAATCGAAACTTGTA 59.788 41.667 20.79 0.00 42.43 2.41
1675 1899 9.369904 ACAACATATGTAATTCAAAATCAAGCC 57.630 29.630 9.21 0.00 41.63 4.35
1761 1987 5.753438 TCTTTGCACGACTATGTCCATATTC 59.247 40.000 0.00 0.00 0.00 1.75
1831 2057 0.828677 AAGTATTTCCGGACGGAGGG 59.171 55.000 13.64 0.00 46.06 4.30
1832 2058 1.206371 ACAAGTATTTCCGGACGGAGG 59.794 52.381 13.64 0.00 46.06 4.30
1833 2059 2.094390 TGACAAGTATTTCCGGACGGAG 60.094 50.000 13.64 3.15 46.06 4.63
1835 2061 2.373540 TGACAAGTATTTCCGGACGG 57.626 50.000 1.83 3.96 0.00 4.79
1836 2062 3.930229 TCAATGACAAGTATTTCCGGACG 59.070 43.478 1.83 0.00 0.00 4.79
1837 2063 5.873179 TTCAATGACAAGTATTTCCGGAC 57.127 39.130 1.83 0.00 0.00 4.79
1839 2065 6.035843 CCATTTCAATGACAAGTATTTCCGG 58.964 40.000 0.00 0.00 38.70 5.14
1840 2066 6.851609 TCCATTTCAATGACAAGTATTTCCG 58.148 36.000 0.81 0.00 38.70 4.30
1841 2067 8.253113 ACATCCATTTCAATGACAAGTATTTCC 58.747 33.333 0.81 0.00 38.70 3.13
1845 2071 9.412460 ACATACATCCATTTCAATGACAAGTAT 57.588 29.630 0.81 2.37 38.70 2.12
1846 2072 8.806429 ACATACATCCATTTCAATGACAAGTA 57.194 30.769 0.81 0.37 38.70 2.24
1847 2073 7.707624 ACATACATCCATTTCAATGACAAGT 57.292 32.000 0.81 0.00 38.70 3.16
1848 2074 9.112725 TCTACATACATCCATTTCAATGACAAG 57.887 33.333 0.81 0.00 38.70 3.16
1849 2075 9.631257 ATCTACATACATCCATTTCAATGACAA 57.369 29.630 0.81 0.00 38.70 3.18
1883 2109 8.717717 TGGATGAAAATGGATGTATCTAGAACT 58.282 33.333 0.00 0.00 0.00 3.01
1884 2110 8.908786 TGGATGAAAATGGATGTATCTAGAAC 57.091 34.615 0.00 0.00 0.00 3.01
1889 2115 9.204337 TCAAAATGGATGAAAATGGATGTATCT 57.796 29.630 0.00 0.00 0.00 1.98
1890 2116 9.991906 ATCAAAATGGATGAAAATGGATGTATC 57.008 29.630 0.00 0.00 0.00 2.24
1891 2117 9.772973 CATCAAAATGGATGAAAATGGATGTAT 57.227 29.630 0.00 0.00 46.00 2.29
1904 2130 7.433131 CGGAATTACTTGTCATCAAAATGGATG 59.567 37.037 0.00 0.00 44.78 3.51
1905 2131 7.416664 CCGGAATTACTTGTCATCAAAATGGAT 60.417 37.037 0.00 0.00 33.42 3.41
1906 2132 6.127758 CCGGAATTACTTGTCATCAAAATGGA 60.128 38.462 0.00 0.00 33.42 3.41
1907 2133 6.035843 CCGGAATTACTTGTCATCAAAATGG 58.964 40.000 0.00 0.00 33.42 3.16
1908 2134 6.747280 GTCCGGAATTACTTGTCATCAAAATG 59.253 38.462 5.23 0.00 32.87 2.32
1909 2135 6.403200 CGTCCGGAATTACTTGTCATCAAAAT 60.403 38.462 5.23 0.00 32.87 1.82
1910 2136 5.106869 CGTCCGGAATTACTTGTCATCAAAA 60.107 40.000 5.23 0.00 32.87 2.44
1911 2137 4.390603 CGTCCGGAATTACTTGTCATCAAA 59.609 41.667 5.23 0.00 32.87 2.69
1912 2138 3.930229 CGTCCGGAATTACTTGTCATCAA 59.070 43.478 5.23 0.00 0.00 2.57
1913 2139 3.517602 CGTCCGGAATTACTTGTCATCA 58.482 45.455 5.23 0.00 0.00 3.07
1914 2140 2.864343 CCGTCCGGAATTACTTGTCATC 59.136 50.000 5.23 0.00 37.50 2.92
1915 2141 2.498481 TCCGTCCGGAATTACTTGTCAT 59.502 45.455 5.23 0.00 42.05 3.06
1916 2142 1.894466 TCCGTCCGGAATTACTTGTCA 59.106 47.619 5.23 0.00 42.05 3.58
1917 2143 2.537401 CTCCGTCCGGAATTACTTGTC 58.463 52.381 5.23 0.00 44.66 3.18
1918 2144 1.206371 CCTCCGTCCGGAATTACTTGT 59.794 52.381 5.23 0.00 44.66 3.16
1919 2145 1.472728 CCCTCCGTCCGGAATTACTTG 60.473 57.143 5.23 0.00 44.66 3.16
1920 2146 0.828677 CCCTCCGTCCGGAATTACTT 59.171 55.000 5.23 0.00 44.66 2.24
1921 2147 0.032813 TCCCTCCGTCCGGAATTACT 60.033 55.000 5.23 0.00 44.66 2.24
1922 2148 0.388294 CTCCCTCCGTCCGGAATTAC 59.612 60.000 5.23 0.00 44.66 1.89
1923 2149 0.032813 ACTCCCTCCGTCCGGAATTA 60.033 55.000 5.23 0.00 44.66 1.40
1924 2150 0.032813 TACTCCCTCCGTCCGGAATT 60.033 55.000 5.23 0.00 44.66 2.17
1925 2151 0.754587 GTACTCCCTCCGTCCGGAAT 60.755 60.000 5.23 0.00 44.66 3.01
1926 2152 1.379044 GTACTCCCTCCGTCCGGAA 60.379 63.158 5.23 0.00 44.66 4.30
1927 2153 1.856539 AAGTACTCCCTCCGTCCGGA 61.857 60.000 0.00 0.00 42.90 5.14
1928 2154 0.969409 AAAGTACTCCCTCCGTCCGG 60.969 60.000 0.00 0.00 0.00 5.14
1929 2155 0.455005 GAAAGTACTCCCTCCGTCCG 59.545 60.000 0.00 0.00 0.00 4.79
1930 2156 1.477295 CAGAAAGTACTCCCTCCGTCC 59.523 57.143 0.00 0.00 0.00 4.79
1931 2157 1.477295 CCAGAAAGTACTCCCTCCGTC 59.523 57.143 0.00 0.00 0.00 4.79
1932 2158 1.076677 TCCAGAAAGTACTCCCTCCGT 59.923 52.381 0.00 0.00 0.00 4.69
1933 2159 1.848652 TCCAGAAAGTACTCCCTCCG 58.151 55.000 0.00 0.00 0.00 4.63
1934 2160 2.436173 CCATCCAGAAAGTACTCCCTCC 59.564 54.545 0.00 0.00 0.00 4.30
1935 2161 3.375699 TCCATCCAGAAAGTACTCCCTC 58.624 50.000 0.00 0.00 0.00 4.30
1936 2162 3.491766 TCCATCCAGAAAGTACTCCCT 57.508 47.619 0.00 0.00 0.00 4.20
1937 2163 3.181450 CCATCCATCCAGAAAGTACTCCC 60.181 52.174 0.00 0.00 0.00 4.30
1938 2164 3.711704 TCCATCCATCCAGAAAGTACTCC 59.288 47.826 0.00 0.00 0.00 3.85
1939 2165 5.559148 ATCCATCCATCCAGAAAGTACTC 57.441 43.478 0.00 0.00 0.00 2.59
1940 2166 6.385443 TCTATCCATCCATCCAGAAAGTACT 58.615 40.000 0.00 0.00 0.00 2.73
1941 2167 6.672266 TCTATCCATCCATCCAGAAAGTAC 57.328 41.667 0.00 0.00 0.00 2.73
1942 2168 7.400339 GGTATCTATCCATCCATCCAGAAAGTA 59.600 40.741 0.00 0.00 0.00 2.24
1943 2169 6.214412 GGTATCTATCCATCCATCCAGAAAGT 59.786 42.308 0.00 0.00 0.00 2.66
1944 2170 6.443206 AGGTATCTATCCATCCATCCAGAAAG 59.557 42.308 0.00 0.00 0.00 2.62
1945 2171 6.334296 AGGTATCTATCCATCCATCCAGAAA 58.666 40.000 0.00 0.00 0.00 2.52
1946 2172 5.920347 AGGTATCTATCCATCCATCCAGAA 58.080 41.667 0.00 0.00 0.00 3.02
1947 2173 5.558856 AGGTATCTATCCATCCATCCAGA 57.441 43.478 0.00 0.00 0.00 3.86
1948 2174 5.723405 TCAAGGTATCTATCCATCCATCCAG 59.277 44.000 0.00 0.00 0.00 3.86
1962 2188 4.679373 ATGTGAATCGCTCAAGGTATCT 57.321 40.909 0.00 0.00 35.22 1.98
1976 2202 6.699204 CAGAAGAGAACAGCGTATATGTGAAT 59.301 38.462 0.00 0.00 0.00 2.57
1987 2213 1.517242 AAAGGCAGAAGAGAACAGCG 58.483 50.000 0.00 0.00 0.00 5.18
1988 2214 3.682377 GTCTAAAGGCAGAAGAGAACAGC 59.318 47.826 0.00 0.00 0.00 4.40
1989 2215 4.887748 TGTCTAAAGGCAGAAGAGAACAG 58.112 43.478 0.00 0.00 0.00 3.16
1990 2216 4.588951 TCTGTCTAAAGGCAGAAGAGAACA 59.411 41.667 11.75 0.00 38.61 3.18
1991 2217 5.140747 TCTGTCTAAAGGCAGAAGAGAAC 57.859 43.478 11.75 0.00 38.61 3.01
1992 2218 4.322349 GCTCTGTCTAAAGGCAGAAGAGAA 60.322 45.833 14.73 0.00 40.68 2.87
1993 2219 3.194542 GCTCTGTCTAAAGGCAGAAGAGA 59.805 47.826 14.73 0.00 40.68 3.10
2091 2317 8.783833 TCAGAACCAGAAAGAGAAAATCATAG 57.216 34.615 0.00 0.00 0.00 2.23
2214 2444 9.425577 AGAAAACTTTTCTCTTAGGTATTCTCG 57.574 33.333 10.49 0.00 0.00 4.04
2229 2459 9.110502 CCATACCCTGATAGTAGAAAACTTTTC 57.889 37.037 6.18 6.18 39.80 2.29
2238 2468 5.282085 CCCATACCCATACCCTGATAGTAGA 60.282 48.000 0.00 0.00 0.00 2.59
2256 2486 3.471680 GAGCAGATTCTTCCACCCATAC 58.528 50.000 0.00 0.00 0.00 2.39
2271 2501 0.609957 CAACCAATGGCAGGAGCAGA 60.610 55.000 0.00 0.00 44.61 4.26
2315 2545 3.070576 GGTCAACCCATGGCAGGC 61.071 66.667 6.09 0.00 34.42 4.85
2342 2572 2.228822 AGAATACACGCCAAAAAGCTGG 59.771 45.455 0.00 0.00 39.71 4.85
2345 2575 5.880341 AGATTAGAATACACGCCAAAAAGC 58.120 37.500 0.00 0.00 0.00 3.51
2347 2577 7.441890 TGAAGATTAGAATACACGCCAAAAA 57.558 32.000 0.00 0.00 0.00 1.94
2370 2600 7.231317 AGCATTAACATATCCCAGGTAACATTG 59.769 37.037 0.00 0.00 41.41 2.82
2412 2645 4.580580 AGACAGACAGGTTCCATCAAAAAC 59.419 41.667 0.00 0.00 0.00 2.43
2429 2662 7.332678 CACATTCAGTCAAATACATCAGACAGA 59.667 37.037 0.00 0.00 33.56 3.41
2475 2708 8.960591 CAGTCCAATCACCTTTAGAAACAATAT 58.039 33.333 0.00 0.00 0.00 1.28
2477 2710 6.209391 CCAGTCCAATCACCTTTAGAAACAAT 59.791 38.462 0.00 0.00 0.00 2.71
2515 2748 7.334421 ACTTTTGAATAATCACGATGCAGTACT 59.666 33.333 0.00 0.00 34.61 2.73
2520 2753 9.929722 GTATTACTTTTGAATAATCACGATGCA 57.070 29.630 0.00 0.00 34.61 3.96
2539 2772 4.880120 TGAATCGGTCGAGAGTGTATTACT 59.120 41.667 0.00 0.00 44.02 2.24
2540 2773 5.165911 TGAATCGGTCGAGAGTGTATTAC 57.834 43.478 0.00 0.00 0.00 1.89
2541 2774 6.387041 AATGAATCGGTCGAGAGTGTATTA 57.613 37.500 0.00 0.00 0.00 0.98
2543 2776 4.920640 AATGAATCGGTCGAGAGTGTAT 57.079 40.909 0.00 0.00 0.00 2.29
2544 2777 4.713824 AAATGAATCGGTCGAGAGTGTA 57.286 40.909 0.00 0.00 0.00 2.90
2545 2778 3.594603 AAATGAATCGGTCGAGAGTGT 57.405 42.857 0.00 0.00 0.00 3.55
2546 2779 3.679980 ACAAAATGAATCGGTCGAGAGTG 59.320 43.478 0.00 0.00 0.00 3.51
2547 2780 3.679980 CACAAAATGAATCGGTCGAGAGT 59.320 43.478 0.00 0.00 0.00 3.24
2548 2781 3.926527 TCACAAAATGAATCGGTCGAGAG 59.073 43.478 0.00 0.00 33.02 3.20
2549 2782 3.920446 TCACAAAATGAATCGGTCGAGA 58.080 40.909 0.00 0.00 33.02 4.04
2550 2783 4.494690 CCATCACAAAATGAATCGGTCGAG 60.495 45.833 0.00 0.00 41.93 4.04
2552 2785 3.126858 ACCATCACAAAATGAATCGGTCG 59.873 43.478 0.00 0.00 41.93 4.79
2553 2786 4.155826 TGACCATCACAAAATGAATCGGTC 59.844 41.667 12.89 12.89 46.11 4.79
2554 2787 4.078537 TGACCATCACAAAATGAATCGGT 58.921 39.130 0.00 0.00 41.93 4.69
2555 2788 4.700268 TGACCATCACAAAATGAATCGG 57.300 40.909 0.00 0.00 41.93 4.18
2556 2789 5.005012 GCATTGACCATCACAAAATGAATCG 59.995 40.000 0.00 0.00 41.93 3.34
2557 2790 5.870433 TGCATTGACCATCACAAAATGAATC 59.130 36.000 0.00 0.00 41.93 2.52
2558 2791 5.640357 GTGCATTGACCATCACAAAATGAAT 59.360 36.000 0.00 0.00 41.93 2.57
2559 2792 4.989797 GTGCATTGACCATCACAAAATGAA 59.010 37.500 0.00 0.00 41.93 2.57
2560 2793 4.281435 AGTGCATTGACCATCACAAAATGA 59.719 37.500 0.00 0.00 43.13 2.57
2561 2794 4.562082 AGTGCATTGACCATCACAAAATG 58.438 39.130 0.00 0.00 32.25 2.32
2562 2795 4.281435 TGAGTGCATTGACCATCACAAAAT 59.719 37.500 0.00 0.00 32.25 1.82
2563 2796 3.635836 TGAGTGCATTGACCATCACAAAA 59.364 39.130 0.00 0.00 32.25 2.44
2564 2797 3.220940 TGAGTGCATTGACCATCACAAA 58.779 40.909 0.00 0.00 32.25 2.83
2565 2798 2.861274 TGAGTGCATTGACCATCACAA 58.139 42.857 0.00 0.00 32.25 3.33
2566 2799 2.565046 TGAGTGCATTGACCATCACA 57.435 45.000 0.00 0.00 32.25 3.58
2567 2800 3.921119 TTTGAGTGCATTGACCATCAC 57.079 42.857 0.00 0.00 0.00 3.06
2568 2801 3.890756 ACTTTTGAGTGCATTGACCATCA 59.109 39.130 0.00 0.00 0.00 3.07
2569 2802 4.510038 ACTTTTGAGTGCATTGACCATC 57.490 40.909 0.00 0.00 0.00 3.51
2570 2803 4.942761 AACTTTTGAGTGCATTGACCAT 57.057 36.364 0.00 0.00 0.00 3.55
2571 2804 6.488344 TGTATAACTTTTGAGTGCATTGACCA 59.512 34.615 0.00 0.00 0.00 4.02
2572 2805 6.801862 GTGTATAACTTTTGAGTGCATTGACC 59.198 38.462 0.00 0.00 0.00 4.02
2573 2806 7.323656 GTGTGTATAACTTTTGAGTGCATTGAC 59.676 37.037 0.00 0.00 0.00 3.18
2574 2807 7.228507 AGTGTGTATAACTTTTGAGTGCATTGA 59.771 33.333 0.00 0.00 0.00 2.57
2575 2808 7.362662 AGTGTGTATAACTTTTGAGTGCATTG 58.637 34.615 0.00 0.00 0.00 2.82
2576 2809 7.510549 AGTGTGTATAACTTTTGAGTGCATT 57.489 32.000 0.00 0.00 0.00 3.56
2577 2810 7.013274 ACAAGTGTGTATAACTTTTGAGTGCAT 59.987 33.333 0.00 0.00 35.70 3.96
2578 2811 6.317642 ACAAGTGTGTATAACTTTTGAGTGCA 59.682 34.615 0.00 0.00 35.70 4.57
2579 2812 6.725246 ACAAGTGTGTATAACTTTTGAGTGC 58.275 36.000 0.00 0.00 35.70 4.40
2580 2813 8.394877 TCAACAAGTGTGTATAACTTTTGAGTG 58.605 33.333 0.00 0.00 36.80 3.51
2581 2814 8.395633 GTCAACAAGTGTGTATAACTTTTGAGT 58.604 33.333 10.99 0.00 36.80 3.41
2582 2815 7.855904 GGTCAACAAGTGTGTATAACTTTTGAG 59.144 37.037 10.99 0.00 36.80 3.02
2583 2816 7.466185 CGGTCAACAAGTGTGTATAACTTTTGA 60.466 37.037 0.00 0.00 36.80 2.69
2584 2817 6.631238 CGGTCAACAAGTGTGTATAACTTTTG 59.369 38.462 0.00 0.00 36.80 2.44
2585 2818 6.539464 TCGGTCAACAAGTGTGTATAACTTTT 59.461 34.615 0.00 0.00 36.80 2.27
2586 2819 6.050432 TCGGTCAACAAGTGTGTATAACTTT 58.950 36.000 0.00 0.00 36.80 2.66
2587 2820 5.603596 TCGGTCAACAAGTGTGTATAACTT 58.396 37.500 0.00 0.00 36.80 2.66
2588 2821 5.204409 TCGGTCAACAAGTGTGTATAACT 57.796 39.130 0.00 0.00 36.80 2.24
2589 2822 6.146510 TGAATCGGTCAACAAGTGTGTATAAC 59.853 38.462 0.00 0.00 36.80 1.89
2590 2823 6.224584 TGAATCGGTCAACAAGTGTGTATAA 58.775 36.000 0.00 0.00 36.80 0.98
2591 2824 5.785243 TGAATCGGTCAACAAGTGTGTATA 58.215 37.500 0.00 0.00 36.80 1.47
2592 2825 4.637276 TGAATCGGTCAACAAGTGTGTAT 58.363 39.130 0.00 0.00 36.80 2.29
2593 2826 4.061357 TGAATCGGTCAACAAGTGTGTA 57.939 40.909 0.00 0.00 36.80 2.90
2594 2827 2.912771 TGAATCGGTCAACAAGTGTGT 58.087 42.857 0.00 0.00 40.75 3.72
2595 2828 4.488126 AATGAATCGGTCAACAAGTGTG 57.512 40.909 0.00 0.00 40.50 3.82
2596 2829 4.319477 CGAAATGAATCGGTCAACAAGTGT 60.319 41.667 0.00 0.00 40.50 3.55
2597 2830 4.151070 CGAAATGAATCGGTCAACAAGTG 58.849 43.478 0.00 0.00 40.50 3.16
2598 2831 3.813166 ACGAAATGAATCGGTCAACAAGT 59.187 39.130 1.59 0.00 46.82 3.16
2599 2832 4.084066 TCACGAAATGAATCGGTCAACAAG 60.084 41.667 1.59 0.00 46.82 3.16
2618 2851 1.526887 CGCAGGGCATTAACTATCACG 59.473 52.381 0.00 0.00 0.00 4.35
2631 2864 5.563085 CGAGAGGAATATATATACGCAGGGC 60.563 48.000 0.00 0.00 0.00 5.19
2633 2866 6.483974 ACTCGAGAGGAATATATATACGCAGG 59.516 42.308 21.68 0.00 0.00 4.85
2634 2867 7.485418 ACTCGAGAGGAATATATATACGCAG 57.515 40.000 21.68 0.00 0.00 5.18
2642 2875 6.491745 TGAAGCTCAACTCGAGAGGAATATAT 59.508 38.462 21.68 0.00 45.45 0.86
2643 2876 5.828328 TGAAGCTCAACTCGAGAGGAATATA 59.172 40.000 21.68 0.00 45.45 0.86
2644 2877 4.646945 TGAAGCTCAACTCGAGAGGAATAT 59.353 41.667 21.68 4.45 45.45 1.28
2646 2879 2.828520 TGAAGCTCAACTCGAGAGGAAT 59.171 45.455 21.68 4.75 45.45 3.01
2649 2882 1.543802 AGTGAAGCTCAACTCGAGAGG 59.456 52.381 21.68 10.61 45.45 3.69
2655 2888 4.025313 GTCAAAGTCAGTGAAGCTCAACTC 60.025 45.833 0.00 0.00 0.00 3.01
2732 2974 7.033791 TCGAACATCTAGAGTACCAAATCAAC 58.966 38.462 0.00 0.00 0.00 3.18
2735 2977 8.569641 AGTATCGAACATCTAGAGTACCAAATC 58.430 37.037 0.00 0.00 0.00 2.17
2783 3025 6.964464 TGCACCACCTAATAAGATTCCTAAA 58.036 36.000 0.00 0.00 0.00 1.85
2796 3144 2.509548 AGATGGCTAATGCACCACCTAA 59.490 45.455 0.00 0.00 39.19 2.69
2797 3145 2.126882 AGATGGCTAATGCACCACCTA 58.873 47.619 0.00 0.00 39.19 3.08
2798 3146 0.921896 AGATGGCTAATGCACCACCT 59.078 50.000 0.00 0.00 39.19 4.00
2841 3189 8.899771 GCCCCAAAATATATATTGCGTATTAGT 58.100 33.333 8.74 0.00 0.00 2.24
2852 3200 9.247861 GAAATCACTCTGCCCCAAAATATATAT 57.752 33.333 0.00 0.00 0.00 0.86
2879 3277 1.917872 TTGTAACAGAACCATGCCCC 58.082 50.000 0.00 0.00 0.00 5.80
2905 3303 9.717942 ATCTGGCTTGATTTCATAGAATAGTAC 57.282 33.333 0.00 0.00 0.00 2.73
2935 3333 9.537192 CTTATATTGGCATGATGAAATTTGTGT 57.463 29.630 0.00 0.00 0.00 3.72
2936 3334 9.752961 TCTTATATTGGCATGATGAAATTTGTG 57.247 29.630 0.00 0.00 0.00 3.33
2937 3335 9.976511 CTCTTATATTGGCATGATGAAATTTGT 57.023 29.630 0.00 0.00 0.00 2.83
2961 3359 9.997482 TTTGGTAAAACGAAGCATATAATTCTC 57.003 29.630 0.00 0.00 0.00 2.87
3076 3479 7.090173 TGGCAGTATCAGTTTCTTTAAATTGC 58.910 34.615 0.00 0.00 33.57 3.56
3081 3484 5.312895 TGCTGGCAGTATCAGTTTCTTTAA 58.687 37.500 17.16 0.00 34.89 1.52
3082 3485 4.905429 TGCTGGCAGTATCAGTTTCTTTA 58.095 39.130 17.16 0.00 34.89 1.85
3084 3487 3.423539 TGCTGGCAGTATCAGTTTCTT 57.576 42.857 17.16 0.00 34.89 2.52
3085 3488 3.008375 TCTTGCTGGCAGTATCAGTTTCT 59.992 43.478 17.16 0.00 34.89 2.52


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.