Multiple sequence alignment - TraesCS4B01G042500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G042500 chr4B 100.000 3464 0 0 1 3464 29675674 29672211 0.000000e+00 6397.0
1 TraesCS4B01G042500 chr4B 92.308 65 5 0 1238 1302 457770570 457770634 3.680000e-15 93.5
2 TraesCS4B01G042500 chr4D 88.463 2869 177 62 426 3234 17767612 17764838 0.000000e+00 3323.0
3 TraesCS4B01G042500 chr4A 88.613 1976 139 40 414 2336 583164200 583162258 0.000000e+00 2324.0
4 TraesCS4B01G042500 chr4A 84.646 495 24 24 2441 2915 583162109 583161647 2.450000e-121 446.0
5 TraesCS4B01G042500 chr4A 82.787 366 18 16 2 351 583165026 583164690 5.660000e-73 285.0
6 TraesCS4B01G042500 chr4A 100.000 28 0 0 3245 3272 6493737 6493764 6.000000e-03 52.8
7 TraesCS4B01G042500 chr4A 88.889 45 2 3 3245 3286 189662969 189663013 6.000000e-03 52.8
8 TraesCS4B01G042500 chr5A 86.301 73 10 0 1221 1293 1714129 1714057 2.870000e-11 80.5
9 TraesCS4B01G042500 chr5A 74.468 188 36 4 1479 1654 1713889 1713702 1.720000e-08 71.3
10 TraesCS4B01G042500 chr5A 82.927 82 9 5 1221 1298 1759297 1759217 6.200000e-08 69.4
11 TraesCS4B01G042500 chr5A 90.909 44 4 0 1472 1515 1834390 1834347 3.730000e-05 60.2
12 TraesCS4B01G042500 chr5B 85.000 80 7 5 1223 1298 2883800 2883878 3.710000e-10 76.8
13 TraesCS4B01G042500 chr5B 91.489 47 2 2 3419 3464 127707560 127707515 2.890000e-06 63.9
14 TraesCS4B01G042500 chr5B 91.304 46 2 2 3419 3463 315198270 315198226 1.040000e-05 62.1
15 TraesCS4B01G042500 chr5B 91.304 46 2 2 3419 3463 527502295 527502251 1.040000e-05 62.1
16 TraesCS4B01G042500 chr5D 84.615 78 9 3 1217 1293 3070841 3070916 1.330000e-09 75.0
17 TraesCS4B01G042500 chr5D 74.359 195 38 3 1472 1654 3012987 3013181 4.800000e-09 73.1
18 TraesCS4B01G042500 chr5D 74.468 188 36 6 1479 1654 3071102 3071289 1.720000e-08 71.3
19 TraesCS4B01G042500 chr1D 87.097 62 8 0 3403 3464 6839016 6838955 1.720000e-08 71.3
20 TraesCS4B01G042500 chr1B 80.899 89 15 2 3377 3464 678130923 678131010 6.200000e-08 69.4
21 TraesCS4B01G042500 chr6B 93.478 46 1 2 3419 3463 91001429 91001473 2.230000e-07 67.6
22 TraesCS4B01G042500 chr6B 91.304 46 4 0 3419 3464 574724084 574724039 2.890000e-06 63.9
23 TraesCS4B01G042500 chr7D 91.667 48 3 1 3398 3445 491791275 491791321 8.020000e-07 65.8
24 TraesCS4B01G042500 chr3B 91.489 47 2 2 3419 3464 445245421 445245466 2.890000e-06 63.9
25 TraesCS4B01G042500 chr7B 97.059 34 0 1 3243 3275 64167247 64167280 4.830000e-04 56.5
26 TraesCS4B01G042500 chr7B 90.476 42 2 2 57 96 730183233 730183274 2.000000e-03 54.7
27 TraesCS4B01G042500 chr6D 96.875 32 0 1 3242 3272 120663316 120663285 6.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G042500 chr4B 29672211 29675674 3463 True 6397.000000 6397 100.000000 1 3464 1 chr4B.!!$R1 3463
1 TraesCS4B01G042500 chr4D 17764838 17767612 2774 True 3323.000000 3323 88.463000 426 3234 1 chr4D.!!$R1 2808
2 TraesCS4B01G042500 chr4A 583161647 583165026 3379 True 1018.333333 2324 85.348667 2 2915 3 chr4A.!!$R1 2913

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
88 101 0.185901 ATGCAGATGCCGGGGTTTAT 59.814 50.000 2.18 0.0 41.18 1.40 F
658 1106 0.259938 AATGCCACCCATTCTCCTCC 59.740 55.000 0.00 0.0 40.02 4.30 F
1253 1739 1.000270 AGCCAGAAGAGCCTCGAGA 60.000 57.895 15.71 0.0 0.00 4.04 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1631 2123 0.248825 CACTCGATGAAGGAGAGGCG 60.249 60.0 0.00 0.0 36.40 5.52 R
1813 2311 0.405585 CCTTCACCTCCACCATGGTT 59.594 55.0 16.84 0.0 39.03 3.67 R
2835 3431 0.031857 CCTATGTCTCGCTCTGCCTG 59.968 60.0 0.00 0.0 0.00 4.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
29 30 3.257469 TCAAACCATGCAAAGCAACAA 57.743 38.095 0.00 0.00 43.62 2.83
88 101 0.185901 ATGCAGATGCCGGGGTTTAT 59.814 50.000 2.18 0.00 41.18 1.40
105 118 8.528643 CGGGGTTTATCCTTCTTTTAGAAAAAT 58.471 33.333 0.00 0.00 33.19 1.82
106 119 9.653287 GGGGTTTATCCTTCTTTTAGAAAAATG 57.347 33.333 0.00 0.00 33.19 2.32
137 152 2.973945 AGAGAATTCTAGCGGCGTTTT 58.026 42.857 8.25 0.00 0.00 2.43
154 169 6.632834 CGGCGTTTTCAAAATATCATTCCTAG 59.367 38.462 0.00 0.00 0.00 3.02
155 170 7.466725 CGGCGTTTTCAAAATATCATTCCTAGA 60.467 37.037 0.00 0.00 0.00 2.43
156 171 7.644157 GGCGTTTTCAAAATATCATTCCTAGAC 59.356 37.037 0.00 0.00 0.00 2.59
210 225 8.638685 AATGCATCATTCTTGTACTAAAATGC 57.361 30.769 0.00 8.34 37.94 3.56
211 226 7.155655 TGCATCATTCTTGTACTAAAATGCA 57.844 32.000 16.39 16.39 43.17 3.96
212 227 7.252708 TGCATCATTCTTGTACTAAAATGCAG 58.747 34.615 16.39 7.44 41.25 4.41
213 228 7.094248 TGCATCATTCTTGTACTAAAATGCAGT 60.094 33.333 16.39 0.00 41.25 4.40
214 229 8.397906 GCATCATTCTTGTACTAAAATGCAGTA 58.602 33.333 0.00 0.00 37.51 2.74
215 230 9.926751 CATCATTCTTGTACTAAAATGCAGTAG 57.073 33.333 0.00 0.00 0.00 2.57
216 231 9.890629 ATCATTCTTGTACTAAAATGCAGTAGA 57.109 29.630 8.43 0.00 0.00 2.59
217 232 9.719355 TCATTCTTGTACTAAAATGCAGTAGAA 57.281 29.630 8.43 2.26 32.63 2.10
222 237 9.944663 CTTGTACTAAAATGCAGTAGAAAAACA 57.055 29.630 8.43 0.00 33.06 2.83
224 239 9.724839 TGTACTAAAATGCAGTAGAAAAACAAC 57.275 29.630 8.43 0.00 0.00 3.32
225 240 9.724839 GTACTAAAATGCAGTAGAAAAACAACA 57.275 29.630 8.43 0.00 0.00 3.33
230 245 3.445450 TGCAGTAGAAAAACAACAGCCAA 59.555 39.130 0.00 0.00 0.00 4.52
236 251 7.904461 CAGTAGAAAAACAACAGCCAAAATTTG 59.096 33.333 0.00 0.00 0.00 2.32
238 253 6.610456 AGAAAAACAACAGCCAAAATTTGTG 58.390 32.000 4.92 0.16 32.54 3.33
239 254 5.956068 AAAACAACAGCCAAAATTTGTGT 57.044 30.435 4.92 0.80 32.54 3.72
242 257 6.843069 AACAACAGCCAAAATTTGTGTATC 57.157 33.333 4.92 0.00 32.54 2.24
244 259 6.523840 ACAACAGCCAAAATTTGTGTATCAT 58.476 32.000 4.92 0.00 30.99 2.45
328 345 9.540538 TCAGTATTCAAAAAGGGGAATATGAAA 57.459 29.630 0.00 0.00 38.04 2.69
339 356 9.547279 AAAGGGGAATATGAAATAGAAAAGTGT 57.453 29.630 0.00 0.00 28.50 3.55
359 770 3.835978 TGTGTGGTGGTAGTAGCTAACAT 59.164 43.478 0.00 0.00 36.00 2.71
368 779 6.864165 GTGGTAGTAGCTAACATCTATTGCTC 59.136 42.308 0.00 0.00 36.00 4.26
389 800 3.987868 TCTGTCGTATTTTGAGAGCACAC 59.012 43.478 0.00 0.00 0.00 3.82
396 807 5.277297 CGTATTTTGAGAGCACACTGAAACA 60.277 40.000 0.00 0.00 0.00 2.83
400 811 4.355543 TGAGAGCACACTGAAACAAAAC 57.644 40.909 0.00 0.00 0.00 2.43
401 812 3.755905 TGAGAGCACACTGAAACAAAACA 59.244 39.130 0.00 0.00 0.00 2.83
402 813 4.398988 TGAGAGCACACTGAAACAAAACAT 59.601 37.500 0.00 0.00 0.00 2.71
403 814 4.675510 AGAGCACACTGAAACAAAACATG 58.324 39.130 0.00 0.00 0.00 3.21
420 863 1.138661 CATGGTGTGGTGGTGCTTTTT 59.861 47.619 0.00 0.00 0.00 1.94
422 865 2.672098 TGGTGTGGTGGTGCTTTTTAT 58.328 42.857 0.00 0.00 0.00 1.40
455 898 3.643763 CTTCCTTCCCATAGAATCGACG 58.356 50.000 0.00 0.00 32.82 5.12
472 915 4.181578 TCGACGGATCCTCTTTCAAATTC 58.818 43.478 10.75 0.00 0.00 2.17
503 946 3.142951 ACGTGCACCTAAACTGCAATAA 58.857 40.909 12.15 0.00 46.04 1.40
509 952 7.535139 GTGCACCTAAACTGCAATAAGAAATA 58.465 34.615 5.22 0.00 46.04 1.40
510 953 8.026607 GTGCACCTAAACTGCAATAAGAAATAA 58.973 33.333 5.22 0.00 46.04 1.40
574 1017 4.177783 GCGAAAAAGGTGAAGGAAAACAA 58.822 39.130 0.00 0.00 0.00 2.83
577 1023 5.220397 CGAAAAAGGTGAAGGAAAACAAAGC 60.220 40.000 0.00 0.00 0.00 3.51
658 1106 0.259938 AATGCCACCCATTCTCCTCC 59.740 55.000 0.00 0.00 40.02 4.30
776 1252 4.899239 GCCAGTGATCGCCTCCCG 62.899 72.222 1.76 0.00 38.61 5.14
794 1270 1.675552 CGAAACAACACCTCCCAACT 58.324 50.000 0.00 0.00 0.00 3.16
860 1346 2.079925 GAGGTAAGAAAGCTGCCACAG 58.920 52.381 0.00 0.00 35.60 3.66
998 1484 4.728102 TACCGCCGCCACTTCACG 62.728 66.667 0.00 0.00 0.00 4.35
1015 1501 3.056328 GTCTTCCCACGCAAGGCC 61.056 66.667 0.00 0.00 46.39 5.19
1184 1670 1.374758 GTGGTCGAGAGCAAGGTGG 60.375 63.158 6.56 0.00 40.82 4.61
1185 1671 2.435059 GGTCGAGAGCAAGGTGGC 60.435 66.667 0.00 0.00 0.00 5.01
1186 1672 2.435059 GTCGAGAGCAAGGTGGCC 60.435 66.667 0.00 0.00 0.00 5.36
1253 1739 1.000270 AGCCAGAAGAGCCTCGAGA 60.000 57.895 15.71 0.00 0.00 4.04
1307 1793 3.173240 GCGACTTCACCGCGTCTC 61.173 66.667 4.92 0.00 43.28 3.36
1308 1794 2.561885 CGACTTCACCGCGTCTCT 59.438 61.111 4.92 0.00 0.00 3.10
1309 1795 1.512310 CGACTTCACCGCGTCTCTC 60.512 63.158 4.92 0.00 0.00 3.20
1310 1796 1.512310 GACTTCACCGCGTCTCTCG 60.512 63.158 4.92 0.00 43.12 4.04
1331 1817 2.573869 CCGTCGACATGGACTGCT 59.426 61.111 17.16 0.00 34.75 4.24
1349 1835 3.171828 TTCTTTGGTGGCTCGCCGA 62.172 57.895 3.14 0.00 36.72 5.54
1423 1912 1.612442 AGAAAGCTGCTACCCGGGA 60.612 57.895 32.02 10.31 0.00 5.14
1426 1915 1.900545 AAAGCTGCTACCCGGGAGAC 61.901 60.000 32.02 16.16 0.00 3.36
1717 2212 2.434359 GCGTCCTTCTTCCCGGTG 60.434 66.667 0.00 0.00 0.00 4.94
1773 2268 3.791586 GCAGGTGGAGGAGGAGGC 61.792 72.222 0.00 0.00 0.00 4.70
1774 2269 3.086600 CAGGTGGAGGAGGAGGCC 61.087 72.222 0.00 0.00 0.00 5.19
1813 2311 1.229209 GGAGGTGGTGGACAGAGGA 60.229 63.158 0.00 0.00 0.00 3.71
1925 2423 2.281484 GCACGCCCTTCACCTTCA 60.281 61.111 0.00 0.00 0.00 3.02
1926 2424 2.617274 GCACGCCCTTCACCTTCAC 61.617 63.158 0.00 0.00 0.00 3.18
1927 2425 1.966451 CACGCCCTTCACCTTCACC 60.966 63.158 0.00 0.00 0.00 4.02
1928 2426 2.147387 ACGCCCTTCACCTTCACCT 61.147 57.895 0.00 0.00 0.00 4.00
1929 2427 1.376037 CGCCCTTCACCTTCACCTC 60.376 63.158 0.00 0.00 0.00 3.85
1930 2428 1.002011 GCCCTTCACCTTCACCTCC 60.002 63.158 0.00 0.00 0.00 4.30
1934 2432 0.247736 CTTCACCTTCACCTCCGAGG 59.752 60.000 13.31 13.31 42.49 4.63
2107 2611 2.571096 GACGACAGCGACGACGAG 60.571 66.667 12.29 5.04 42.66 4.18
2148 2658 4.295119 ACAGCACCACCCGTCGTC 62.295 66.667 0.00 0.00 0.00 4.20
2210 2720 3.263503 CTCCTGTTCACGTCGCGGA 62.264 63.158 6.13 0.00 0.00 5.54
2314 2824 1.284491 TGCATTGCCACCTCCTAATCA 59.716 47.619 6.12 0.00 0.00 2.57
2315 2825 2.291475 TGCATTGCCACCTCCTAATCAA 60.291 45.455 6.12 0.00 0.00 2.57
2348 2858 1.669760 GCCCGACGAAACATGTCCA 60.670 57.895 0.00 0.00 32.68 4.02
2349 2859 1.635663 GCCCGACGAAACATGTCCAG 61.636 60.000 0.00 0.00 32.68 3.86
2351 2861 0.948623 CCGACGAAACATGTCCAGCA 60.949 55.000 0.00 0.00 32.68 4.41
2352 2862 1.078709 CGACGAAACATGTCCAGCAT 58.921 50.000 0.00 0.00 38.60 3.79
2353 2863 1.464608 CGACGAAACATGTCCAGCATT 59.535 47.619 0.00 0.00 35.19 3.56
2354 2864 2.095768 CGACGAAACATGTCCAGCATTT 60.096 45.455 0.00 0.00 35.19 2.32
2355 2865 3.236816 GACGAAACATGTCCAGCATTTG 58.763 45.455 0.00 0.00 35.19 2.32
2356 2866 1.987770 CGAAACATGTCCAGCATTTGC 59.012 47.619 0.00 0.00 42.49 3.68
2358 2868 3.592059 GAAACATGTCCAGCATTTGCAT 58.408 40.909 0.00 0.00 45.16 3.96
2359 2869 3.688694 AACATGTCCAGCATTTGCATT 57.311 38.095 0.00 0.00 45.16 3.56
2360 2870 3.688694 ACATGTCCAGCATTTGCATTT 57.311 38.095 5.20 0.00 45.16 2.32
2364 2894 6.424807 CATGTCCAGCATTTGCATTTGCAC 62.425 45.833 19.79 11.76 42.92 4.57
2390 2920 2.868583 ACTGCTGCTAATGCGATAGTTG 59.131 45.455 0.00 0.00 43.34 3.16
2397 2927 2.128771 AATGCGATAGTTGGGTTGCT 57.871 45.000 0.00 0.00 39.35 3.91
2398 2928 1.382522 ATGCGATAGTTGGGTTGCTG 58.617 50.000 0.00 0.00 39.35 4.41
2433 3004 2.972713 CCCAGATAGTTAGCCTAGCCAA 59.027 50.000 0.00 0.00 32.25 4.52
2531 3102 4.758251 CCGCCCATGTGTCGCTCA 62.758 66.667 0.00 0.00 0.00 4.26
2536 3107 1.468054 GCCCATGTGTCGCTCATTTTC 60.468 52.381 0.00 0.00 0.00 2.29
2546 3117 0.179056 GCTCATTTTCCCCCGATCGA 60.179 55.000 18.66 0.00 0.00 3.59
2547 3118 1.543429 GCTCATTTTCCCCCGATCGAT 60.543 52.381 18.66 0.00 0.00 3.59
2548 3119 2.417719 CTCATTTTCCCCCGATCGATC 58.582 52.381 18.66 15.68 0.00 3.69
2619 3200 3.319245 GGCGTGACCGTACTACTTC 57.681 57.895 0.00 0.00 36.15 3.01
2694 3276 5.545658 AACAGATTGTTGGCTGTATAACG 57.454 39.130 0.00 0.00 44.06 3.18
2699 3281 5.527582 AGATTGTTGGCTGTATAACGGATTC 59.472 40.000 0.00 0.00 0.00 2.52
2702 3284 5.353938 TGTTGGCTGTATAACGGATTCTAC 58.646 41.667 0.00 0.00 0.00 2.59
2703 3285 4.595762 TGGCTGTATAACGGATTCTACC 57.404 45.455 0.00 0.00 0.00 3.18
2731 3318 4.498009 GCTTGCCATTTTCATACATACGCT 60.498 41.667 0.00 0.00 0.00 5.07
2732 3319 4.550577 TGCCATTTTCATACATACGCTG 57.449 40.909 0.00 0.00 0.00 5.18
2733 3320 3.243035 TGCCATTTTCATACATACGCTGC 60.243 43.478 0.00 0.00 0.00 5.25
2734 3321 3.544651 CCATTTTCATACATACGCTGCG 58.455 45.455 21.91 21.91 0.00 5.18
2735 3322 2.730183 TTTTCATACATACGCTGCGC 57.270 45.000 23.51 0.00 0.00 6.09
2841 3437 1.640428 TAATCGACGCTTTCAGGCAG 58.360 50.000 0.00 0.00 0.00 4.85
2935 3539 4.855105 GGCACGGATAGATGCACA 57.145 55.556 0.00 0.00 43.93 4.57
2956 3560 0.800012 GACGTTGATTTTGCCGCCTA 59.200 50.000 0.00 0.00 0.00 3.93
2957 3561 0.519961 ACGTTGATTTTGCCGCCTAC 59.480 50.000 0.00 0.00 0.00 3.18
2958 3562 0.179174 CGTTGATTTTGCCGCCTACC 60.179 55.000 0.00 0.00 0.00 3.18
2959 3563 1.173913 GTTGATTTTGCCGCCTACCT 58.826 50.000 0.00 0.00 0.00 3.08
2968 3572 0.250295 GCCGCCTACCTCATGCATTA 60.250 55.000 0.00 0.00 0.00 1.90
2981 3585 2.005995 GCATTACTCGATGCGTGCA 58.994 52.632 0.00 0.00 42.51 4.57
2987 3591 0.443869 ACTCGATGCGTGCACATTTC 59.556 50.000 18.64 8.62 0.00 2.17
2990 3594 1.139520 GATGCGTGCACATTTCCCC 59.860 57.895 18.64 0.00 0.00 4.81
2991 3595 2.283472 GATGCGTGCACATTTCCCCC 62.283 60.000 18.64 0.00 0.00 5.40
3012 3617 5.221501 CCCCCAAAATGCAGACCTATTATTG 60.222 44.000 0.00 0.00 0.00 1.90
3022 3627 8.856153 TGCAGACCTATTATTGTAAAAGTTCA 57.144 30.769 0.00 0.00 0.00 3.18
3041 3646 7.000575 AGTTCACCAATAATACGAAACATCG 57.999 36.000 0.00 0.00 39.31 3.84
3050 3655 2.736144 ACGAAACATCGTAAGCTGGA 57.264 45.000 1.50 0.00 45.19 3.86
3079 3685 8.873215 ATAAAAATTACATCGATGTCTCGTCT 57.127 30.769 33.11 17.37 45.25 4.18
3088 3694 1.262151 GATGTCTCGTCTCTAGACCGC 59.738 57.143 4.58 0.00 42.24 5.68
3092 3698 0.881159 CTCGTCTCTAGACCGCCGAT 60.881 60.000 4.58 0.00 41.86 4.18
3093 3699 0.879400 TCGTCTCTAGACCGCCGATC 60.879 60.000 4.58 0.00 41.86 3.69
3097 3703 0.881159 CTCTAGACCGCCGATCGACT 60.881 60.000 18.66 9.85 41.67 4.18
3107 3713 1.203563 CGATCGACTAGTACCGCCG 59.796 63.158 10.26 0.00 0.00 6.46
3109 3715 0.234365 GATCGACTAGTACCGCCGTC 59.766 60.000 0.00 0.00 0.00 4.79
3128 3734 2.171940 GAACGAGCTTGCGCACAG 59.828 61.111 11.12 12.49 39.10 3.66
3148 3754 2.048597 CGGCAAGTCGCTACACCA 60.049 61.111 0.00 0.00 41.91 4.17
3150 3756 1.019278 CGGCAAGTCGCTACACCAAT 61.019 55.000 0.00 0.00 41.91 3.16
3151 3757 0.727398 GGCAAGTCGCTACACCAATC 59.273 55.000 0.00 0.00 41.91 2.67
3170 3776 1.073216 CGAGTGTCTAGTTGCTGCCG 61.073 60.000 0.00 0.00 0.00 5.69
3173 3779 0.038159 GTGTCTAGTTGCTGCCGACT 60.038 55.000 10.08 10.08 39.12 4.18
3174 3780 0.038251 TGTCTAGTTGCTGCCGACTG 60.038 55.000 13.86 6.32 36.37 3.51
3175 3781 1.079819 TCTAGTTGCTGCCGACTGC 60.080 57.895 13.86 0.00 36.37 4.40
3177 3783 3.932580 TAGTTGCTGCCGACTGCCG 62.933 63.158 13.86 0.00 39.83 5.69
3185 3791 2.126071 CCGACTGCCGACGTTCAT 60.126 61.111 0.00 0.00 41.76 2.57
3186 3792 2.444624 CCGACTGCCGACGTTCATG 61.445 63.158 0.00 0.00 41.76 3.07
3187 3793 2.778679 GACTGCCGACGTTCATGC 59.221 61.111 0.00 0.00 0.00 4.06
3188 3794 2.740714 GACTGCCGACGTTCATGCC 61.741 63.158 0.00 0.00 0.00 4.40
3189 3795 2.741985 CTGCCGACGTTCATGCCA 60.742 61.111 0.00 0.00 0.00 4.92
3190 3796 2.281139 TGCCGACGTTCATGCCAA 60.281 55.556 0.00 0.00 0.00 4.52
3191 3797 2.175811 GCCGACGTTCATGCCAAC 59.824 61.111 0.00 0.00 0.00 3.77
3192 3798 2.612567 GCCGACGTTCATGCCAACA 61.613 57.895 0.00 0.00 0.00 3.33
3206 3812 3.485394 TGCCAACAAGAATGCAAGTCTA 58.515 40.909 3.86 0.00 42.57 2.59
3214 3820 7.158099 ACAAGAATGCAAGTCTAATTTACCC 57.842 36.000 3.86 0.00 42.57 3.69
3215 3821 6.948309 ACAAGAATGCAAGTCTAATTTACCCT 59.052 34.615 3.86 0.00 42.57 4.34
3219 3825 5.249780 TGCAAGTCTAATTTACCCTTGGA 57.750 39.130 0.00 0.00 34.51 3.53
3242 3848 9.073475 TGGAAAATAAATCTATTATTCCCACCG 57.927 33.333 0.00 0.00 35.90 4.94
3243 3849 9.074576 GGAAAATAAATCTATTATTCCCACCGT 57.925 33.333 0.00 0.00 33.73 4.83
3338 3944 8.640091 TTTGTTTGTTCGATGATGAATTTTCA 57.360 26.923 0.00 0.00 42.14 2.69
3350 3956 4.668576 TGAATTTTCATGACGAGAGCAC 57.331 40.909 0.00 0.00 31.01 4.40
3351 3957 4.064388 TGAATTTTCATGACGAGAGCACA 58.936 39.130 0.00 0.00 31.01 4.57
3352 3958 4.696877 TGAATTTTCATGACGAGAGCACAT 59.303 37.500 0.00 0.00 31.01 3.21
3353 3959 5.874261 TGAATTTTCATGACGAGAGCACATA 59.126 36.000 0.00 0.00 31.98 2.29
3354 3960 5.980698 ATTTTCATGACGAGAGCACATAG 57.019 39.130 0.00 0.00 31.98 2.23
3355 3961 2.498807 TCATGACGAGAGCACATAGC 57.501 50.000 0.00 0.00 46.19 2.97
3372 3978 8.719478 GCACATAGCAGATATATTTGTTTGAC 57.281 34.615 5.25 0.00 44.79 3.18
3373 3979 7.805071 GCACATAGCAGATATATTTGTTTGACC 59.195 37.037 5.25 0.00 44.79 4.02
3374 3980 8.292448 CACATAGCAGATATATTTGTTTGACCC 58.708 37.037 5.25 0.00 0.00 4.46
3375 3981 8.220559 ACATAGCAGATATATTTGTTTGACCCT 58.779 33.333 5.25 0.00 0.00 4.34
3376 3982 9.071276 CATAGCAGATATATTTGTTTGACCCTT 57.929 33.333 5.25 0.00 0.00 3.95
3377 3983 7.573968 AGCAGATATATTTGTTTGACCCTTC 57.426 36.000 5.25 0.00 0.00 3.46
3378 3984 7.349598 AGCAGATATATTTGTTTGACCCTTCT 58.650 34.615 5.25 0.00 0.00 2.85
3379 3985 7.284034 AGCAGATATATTTGTTTGACCCTTCTG 59.716 37.037 5.25 0.00 0.00 3.02
3380 3986 7.420800 CAGATATATTTGTTTGACCCTTCTGC 58.579 38.462 0.00 0.00 0.00 4.26
3381 3987 4.701956 ATATTTGTTTGACCCTTCTGCG 57.298 40.909 0.00 0.00 0.00 5.18
3382 3988 0.383949 TTTGTTTGACCCTTCTGCGC 59.616 50.000 0.00 0.00 0.00 6.09
3383 3989 1.452145 TTGTTTGACCCTTCTGCGCC 61.452 55.000 4.18 0.00 0.00 6.53
3384 3990 2.282180 TTTGACCCTTCTGCGCCC 60.282 61.111 4.18 0.00 0.00 6.13
3385 3991 2.829384 TTTGACCCTTCTGCGCCCT 61.829 57.895 4.18 0.00 0.00 5.19
3386 3992 1.485294 TTTGACCCTTCTGCGCCCTA 61.485 55.000 4.18 0.00 0.00 3.53
3387 3993 1.899437 TTGACCCTTCTGCGCCCTAG 61.899 60.000 4.18 0.00 0.00 3.02
3388 3994 2.284699 ACCCTTCTGCGCCCTAGT 60.285 61.111 4.18 0.00 0.00 2.57
3389 3995 1.900545 GACCCTTCTGCGCCCTAGTT 61.901 60.000 4.18 0.00 0.00 2.24
3390 3996 1.299976 CCCTTCTGCGCCCTAGTTT 59.700 57.895 4.18 0.00 0.00 2.66
3391 3997 1.026718 CCCTTCTGCGCCCTAGTTTG 61.027 60.000 4.18 0.00 0.00 2.93
3392 3998 0.036388 CCTTCTGCGCCCTAGTTTGA 60.036 55.000 4.18 0.00 0.00 2.69
3393 3999 1.407437 CCTTCTGCGCCCTAGTTTGAT 60.407 52.381 4.18 0.00 0.00 2.57
3394 4000 2.359900 CTTCTGCGCCCTAGTTTGATT 58.640 47.619 4.18 0.00 0.00 2.57
3395 4001 3.531538 CTTCTGCGCCCTAGTTTGATTA 58.468 45.455 4.18 0.00 0.00 1.75
3396 4002 3.620427 TCTGCGCCCTAGTTTGATTAA 57.380 42.857 4.18 0.00 0.00 1.40
3397 4003 4.150897 TCTGCGCCCTAGTTTGATTAAT 57.849 40.909 4.18 0.00 0.00 1.40
3398 4004 4.523083 TCTGCGCCCTAGTTTGATTAATT 58.477 39.130 4.18 0.00 0.00 1.40
3399 4005 4.947388 TCTGCGCCCTAGTTTGATTAATTT 59.053 37.500 4.18 0.00 0.00 1.82
3400 4006 5.417580 TCTGCGCCCTAGTTTGATTAATTTT 59.582 36.000 4.18 0.00 0.00 1.82
3401 4007 6.600032 TCTGCGCCCTAGTTTGATTAATTTTA 59.400 34.615 4.18 0.00 0.00 1.52
3402 4008 6.791303 TGCGCCCTAGTTTGATTAATTTTAG 58.209 36.000 4.18 0.00 0.00 1.85
3403 4009 6.183360 TGCGCCCTAGTTTGATTAATTTTAGG 60.183 38.462 4.18 0.00 0.00 2.69
3404 4010 6.038936 GCGCCCTAGTTTGATTAATTTTAGGA 59.961 38.462 0.00 0.00 0.00 2.94
3405 4011 7.255486 GCGCCCTAGTTTGATTAATTTTAGGAT 60.255 37.037 0.00 0.00 0.00 3.24
3406 4012 8.290325 CGCCCTAGTTTGATTAATTTTAGGATC 58.710 37.037 10.66 0.00 0.00 3.36
3407 4013 9.355916 GCCCTAGTTTGATTAATTTTAGGATCT 57.644 33.333 10.66 0.00 0.00 2.75
3411 4017 8.011844 AGTTTGATTAATTTTAGGATCTGGCC 57.988 34.615 0.00 0.00 0.00 5.36
3412 4018 6.976934 TTGATTAATTTTAGGATCTGGCCC 57.023 37.500 0.00 0.00 0.00 5.80
3413 4019 6.279813 TGATTAATTTTAGGATCTGGCCCT 57.720 37.500 0.00 0.00 37.80 5.19
3414 4020 6.682537 TGATTAATTTTAGGATCTGGCCCTT 58.317 36.000 0.00 0.00 35.30 3.95
3415 4021 7.132128 TGATTAATTTTAGGATCTGGCCCTTT 58.868 34.615 0.00 0.00 35.30 3.11
3416 4022 7.623278 TGATTAATTTTAGGATCTGGCCCTTTT 59.377 33.333 0.00 0.00 35.30 2.27
3417 4023 7.806680 TTAATTTTAGGATCTGGCCCTTTTT 57.193 32.000 0.00 0.00 35.30 1.94
3418 4024 5.939764 ATTTTAGGATCTGGCCCTTTTTC 57.060 39.130 0.00 0.00 35.30 2.29
3419 4025 3.382083 TTAGGATCTGGCCCTTTTTCC 57.618 47.619 0.00 0.00 35.30 3.13
3420 4026 1.387119 AGGATCTGGCCCTTTTTCCT 58.613 50.000 0.00 1.82 0.00 3.36
3421 4027 2.573463 AGGATCTGGCCCTTTTTCCTA 58.427 47.619 0.00 0.00 31.93 2.94
3422 4028 2.242452 AGGATCTGGCCCTTTTTCCTAC 59.758 50.000 0.00 0.00 31.93 3.18
3423 4029 2.656002 GATCTGGCCCTTTTTCCTACC 58.344 52.381 0.00 0.00 0.00 3.18
3424 4030 0.326927 TCTGGCCCTTTTTCCTACCG 59.673 55.000 0.00 0.00 0.00 4.02
3425 4031 1.303806 TGGCCCTTTTTCCTACCGC 60.304 57.895 0.00 0.00 0.00 5.68
3426 4032 2.050350 GGCCCTTTTTCCTACCGCC 61.050 63.158 0.00 0.00 0.00 6.13
3427 4033 2.404186 GCCCTTTTTCCTACCGCCG 61.404 63.158 0.00 0.00 0.00 6.46
3428 4034 1.297364 CCCTTTTTCCTACCGCCGA 59.703 57.895 0.00 0.00 0.00 5.54
3429 4035 0.743345 CCCTTTTTCCTACCGCCGAG 60.743 60.000 0.00 0.00 0.00 4.63
3441 4047 4.778143 GCCGAGGTTGATGGCGGT 62.778 66.667 0.00 0.00 45.22 5.68
3442 4048 2.897207 CCGAGGTTGATGGCGGTA 59.103 61.111 0.00 0.00 38.99 4.02
3443 4049 1.227263 CCGAGGTTGATGGCGGTAG 60.227 63.158 0.00 0.00 38.99 3.18
3444 4050 1.227263 CGAGGTTGATGGCGGTAGG 60.227 63.158 0.00 0.00 0.00 3.18
3445 4051 1.672854 CGAGGTTGATGGCGGTAGGA 61.673 60.000 0.00 0.00 0.00 2.94
3446 4052 0.539986 GAGGTTGATGGCGGTAGGAA 59.460 55.000 0.00 0.00 0.00 3.36
3447 4053 0.988832 AGGTTGATGGCGGTAGGAAA 59.011 50.000 0.00 0.00 0.00 3.13
3448 4054 1.092348 GGTTGATGGCGGTAGGAAAC 58.908 55.000 0.00 0.00 0.00 2.78
3450 4056 2.433436 GTTGATGGCGGTAGGAAACTT 58.567 47.619 0.00 0.00 43.67 2.66
3451 4057 3.602483 GTTGATGGCGGTAGGAAACTTA 58.398 45.455 0.00 0.00 43.67 2.24
3452 4058 4.196971 GTTGATGGCGGTAGGAAACTTAT 58.803 43.478 0.00 0.00 43.67 1.73
3453 4059 4.067972 TGATGGCGGTAGGAAACTTATC 57.932 45.455 0.00 0.00 43.67 1.75
3454 4060 2.994186 TGGCGGTAGGAAACTTATCC 57.006 50.000 0.00 0.00 43.67 2.59
3455 4061 2.189676 TGGCGGTAGGAAACTTATCCA 58.810 47.619 0.00 0.00 42.27 3.41
3456 4062 2.093341 TGGCGGTAGGAAACTTATCCAC 60.093 50.000 0.00 0.00 42.27 4.02
3457 4063 2.199236 GCGGTAGGAAACTTATCCACG 58.801 52.381 0.00 0.00 42.27 4.94
3458 4064 2.417787 GCGGTAGGAAACTTATCCACGT 60.418 50.000 0.00 0.00 42.27 4.49
3459 4065 3.442100 CGGTAGGAAACTTATCCACGTC 58.558 50.000 0.00 0.00 42.27 4.34
3460 4066 3.119388 CGGTAGGAAACTTATCCACGTCA 60.119 47.826 0.00 0.00 42.27 4.35
3461 4067 4.430908 GGTAGGAAACTTATCCACGTCAG 58.569 47.826 0.00 0.00 42.27 3.51
3462 4068 2.973945 AGGAAACTTATCCACGTCAGC 58.026 47.619 0.00 0.00 42.27 4.26
3463 4069 1.659098 GGAAACTTATCCACGTCAGCG 59.341 52.381 0.00 0.00 44.93 5.18
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
10 11 2.288458 CCTTGTTGCTTTGCATGGTTTG 59.712 45.455 0.00 0.00 38.76 2.93
64 77 0.250858 CCCCGGCATCTGCATCATTA 60.251 55.000 0.00 0.00 44.36 1.90
105 118 7.494625 CCGCTAGAATTCTCTTGGTTTATAACA 59.505 37.037 12.24 0.00 32.70 2.41
106 119 7.518529 GCCGCTAGAATTCTCTTGGTTTATAAC 60.519 40.741 12.24 0.00 32.70 1.89
119 134 2.695359 TGAAAACGCCGCTAGAATTCT 58.305 42.857 13.56 13.56 0.00 2.40
202 217 7.096065 GGCTGTTGTTTTTCTACTGCATTTTAG 60.096 37.037 0.00 0.00 43.73 1.85
203 218 6.699642 GGCTGTTGTTTTTCTACTGCATTTTA 59.300 34.615 0.00 0.00 43.73 1.52
204 219 5.523552 GGCTGTTGTTTTTCTACTGCATTTT 59.476 36.000 0.00 0.00 43.73 1.82
205 220 5.049828 GGCTGTTGTTTTTCTACTGCATTT 58.950 37.500 0.00 0.00 43.73 2.32
206 221 4.099266 TGGCTGTTGTTTTTCTACTGCATT 59.901 37.500 0.00 0.00 43.73 3.56
207 222 3.636300 TGGCTGTTGTTTTTCTACTGCAT 59.364 39.130 0.00 0.00 43.73 3.96
208 223 3.020274 TGGCTGTTGTTTTTCTACTGCA 58.980 40.909 0.00 0.00 43.73 4.41
209 224 3.708563 TGGCTGTTGTTTTTCTACTGC 57.291 42.857 0.00 0.00 42.29 4.40
210 225 7.538303 AATTTTGGCTGTTGTTTTTCTACTG 57.462 32.000 0.00 0.00 0.00 2.74
211 226 7.606073 ACAAATTTTGGCTGTTGTTTTTCTACT 59.394 29.630 13.42 0.00 30.11 2.57
212 227 7.691877 CACAAATTTTGGCTGTTGTTTTTCTAC 59.308 33.333 13.42 0.00 31.98 2.59
213 228 7.389053 ACACAAATTTTGGCTGTTGTTTTTCTA 59.611 29.630 13.42 0.00 31.98 2.10
214 229 6.206438 ACACAAATTTTGGCTGTTGTTTTTCT 59.794 30.769 13.42 0.00 31.98 2.52
215 230 6.377780 ACACAAATTTTGGCTGTTGTTTTTC 58.622 32.000 13.42 0.00 31.98 2.29
216 231 6.324561 ACACAAATTTTGGCTGTTGTTTTT 57.675 29.167 13.42 0.00 31.98 1.94
217 232 5.956068 ACACAAATTTTGGCTGTTGTTTT 57.044 30.435 13.42 0.00 31.98 2.43
218 233 6.820656 TGATACACAAATTTTGGCTGTTGTTT 59.179 30.769 13.42 3.89 31.98 2.83
219 234 6.344500 TGATACACAAATTTTGGCTGTTGTT 58.656 32.000 13.42 0.11 31.98 2.83
220 235 5.911752 TGATACACAAATTTTGGCTGTTGT 58.088 33.333 13.42 9.99 34.60 3.32
221 236 6.128499 CCATGATACACAAATTTTGGCTGTTG 60.128 38.462 13.42 4.90 34.12 3.33
222 237 5.933463 CCATGATACACAAATTTTGGCTGTT 59.067 36.000 13.42 2.10 34.12 3.16
223 238 5.245751 TCCATGATACACAAATTTTGGCTGT 59.754 36.000 13.42 11.23 34.12 4.40
224 239 5.722263 TCCATGATACACAAATTTTGGCTG 58.278 37.500 13.42 6.21 34.12 4.85
225 240 5.999205 TCCATGATACACAAATTTTGGCT 57.001 34.783 13.42 0.85 34.12 4.75
230 245 9.561069 GACTACCTATCCATGATACACAAATTT 57.439 33.333 0.00 0.00 0.00 1.82
295 312 8.153221 TCCCCTTTTTGAATACTGATGTACTA 57.847 34.615 0.00 0.00 0.00 1.82
296 313 7.027874 TCCCCTTTTTGAATACTGATGTACT 57.972 36.000 0.00 0.00 0.00 2.73
297 314 7.696992 TTCCCCTTTTTGAATACTGATGTAC 57.303 36.000 0.00 0.00 0.00 2.90
328 345 5.562298 ACTACCACCACACACTTTTCTAT 57.438 39.130 0.00 0.00 0.00 1.98
329 346 5.510179 GCTACTACCACCACACACTTTTCTA 60.510 44.000 0.00 0.00 0.00 2.10
330 347 3.926058 ACTACCACCACACACTTTTCT 57.074 42.857 0.00 0.00 0.00 2.52
331 348 3.497262 GCTACTACCACCACACACTTTTC 59.503 47.826 0.00 0.00 0.00 2.29
337 354 3.232662 TGTTAGCTACTACCACCACACA 58.767 45.455 0.00 0.00 0.00 3.72
338 355 3.947910 TGTTAGCTACTACCACCACAC 57.052 47.619 0.00 0.00 0.00 3.82
339 356 4.350245 AGATGTTAGCTACTACCACCACA 58.650 43.478 0.00 0.00 0.00 4.17
359 770 6.863275 TCTCAAAATACGACAGAGCAATAGA 58.137 36.000 0.00 0.00 0.00 1.98
368 779 3.990469 AGTGTGCTCTCAAAATACGACAG 59.010 43.478 0.00 0.00 0.00 3.51
389 800 3.864583 CACCACACCATGTTTTGTTTCAG 59.135 43.478 0.00 0.00 0.00 3.02
396 807 0.463620 GCACCACCACACCATGTTTT 59.536 50.000 0.00 0.00 0.00 2.43
400 811 0.752054 AAAAGCACCACCACACCATG 59.248 50.000 0.00 0.00 0.00 3.66
401 812 1.494960 AAAAAGCACCACCACACCAT 58.505 45.000 0.00 0.00 0.00 3.55
402 813 2.145397 TAAAAAGCACCACCACACCA 57.855 45.000 0.00 0.00 0.00 4.17
403 814 3.744238 AATAAAAAGCACCACCACACC 57.256 42.857 0.00 0.00 0.00 4.16
420 863 3.258123 GGAAGGAAGCAACAGCCAAAATA 59.742 43.478 0.00 0.00 0.00 1.40
422 865 1.412343 GGAAGGAAGCAACAGCCAAAA 59.588 47.619 0.00 0.00 0.00 2.44
455 898 3.065925 CGCCTGAATTTGAAAGAGGATCC 59.934 47.826 2.48 2.48 33.66 3.36
472 915 3.406361 GTGCACGTCAGTCGCCTG 61.406 66.667 0.00 0.00 44.19 4.85
514 957 7.879160 TGGCATTCTCTTTTGCTAAAATTCATT 59.121 29.630 0.00 0.00 38.88 2.57
515 958 7.388437 TGGCATTCTCTTTTGCTAAAATTCAT 58.612 30.769 0.00 0.00 38.88 2.57
533 976 2.979813 CGCAAGTTACACTTTGGCATTC 59.020 45.455 0.00 0.00 36.03 2.67
577 1023 2.535485 TACTTGCCTCCGCCACCATG 62.535 60.000 0.00 0.00 0.00 3.66
658 1106 2.144859 TTTGTAGGCGGGGGAAAGGG 62.145 60.000 0.00 0.00 0.00 3.95
756 1232 2.202987 GAGGCGATCACTGGCTGG 60.203 66.667 0.00 0.00 42.99 4.85
776 1252 2.879026 GAGAGTTGGGAGGTGTTGTTTC 59.121 50.000 0.00 0.00 0.00 2.78
813 1289 3.276857 ACGTCAATAGAGAAGGCGTAGA 58.723 45.455 0.00 0.00 0.00 2.59
815 1291 3.181493 GGAACGTCAATAGAGAAGGCGTA 60.181 47.826 0.00 0.00 0.00 4.42
816 1292 2.416972 GGAACGTCAATAGAGAAGGCGT 60.417 50.000 0.00 0.00 0.00 5.68
817 1293 2.159226 AGGAACGTCAATAGAGAAGGCG 60.159 50.000 0.00 0.00 0.00 5.52
818 1294 3.528597 AGGAACGTCAATAGAGAAGGC 57.471 47.619 0.00 0.00 0.00 4.35
820 1296 5.105752 CCTCAAGGAACGTCAATAGAGAAG 58.894 45.833 8.33 0.00 37.39 2.85
822 1298 4.087182 ACCTCAAGGAACGTCAATAGAGA 58.913 43.478 2.30 0.00 38.94 3.10
823 1299 4.457834 ACCTCAAGGAACGTCAATAGAG 57.542 45.455 2.30 0.00 38.94 2.43
907 1393 3.951655 GAACGGCTTGCGGTGCATG 62.952 63.158 6.58 0.00 38.76 4.06
998 1484 3.056328 GGCCTTGCGTGGGAAGAC 61.056 66.667 0.00 0.00 0.00 3.01
1132 1618 1.532868 GCATTCCATATGTCGACCTGC 59.467 52.381 14.12 5.55 0.00 4.85
1228 1714 0.249405 GGCTCTTCTGGCTCATCGAG 60.249 60.000 0.00 0.00 0.00 4.04
1253 1739 3.215245 GAGGCTCTCGGTGCAGAT 58.785 61.111 7.40 0.00 0.00 2.90
1310 1796 2.879462 GTCCATGTCGACGGCGTC 60.879 66.667 29.06 29.06 38.98 5.19
1326 1812 0.886490 CGAGCCACCAAAGAAGCAGT 60.886 55.000 0.00 0.00 0.00 4.40
1331 1817 2.463589 ATCGGCGAGCCACCAAAGAA 62.464 55.000 17.22 0.00 35.37 2.52
1402 1891 2.167861 CGGGTAGCAGCTTTCTCGC 61.168 63.158 0.00 0.00 0.00 5.03
1404 1893 1.153349 CCCGGGTAGCAGCTTTCTC 60.153 63.158 14.18 0.00 0.00 2.87
1428 1917 3.291101 TAGTTCACCGCCACGAGCC 62.291 63.158 0.00 0.00 38.78 4.70
1429 1918 2.092882 GTAGTTCACCGCCACGAGC 61.093 63.158 0.00 0.00 38.52 5.03
1631 2123 0.248825 CACTCGATGAAGGAGAGGCG 60.249 60.000 0.00 0.00 36.40 5.52
1707 2199 2.606519 CCTCCACCACCGGGAAGA 60.607 66.667 6.32 0.00 38.05 2.87
1717 2212 1.374758 CTCGCACTTGTCCTCCACC 60.375 63.158 0.00 0.00 0.00 4.61
1773 2268 1.077644 TCCTCCTCGTCTTCCTCGG 60.078 63.158 0.00 0.00 0.00 4.63
1774 2269 1.098712 CCTCCTCCTCGTCTTCCTCG 61.099 65.000 0.00 0.00 0.00 4.63
1813 2311 0.405585 CCTTCACCTCCACCATGGTT 59.594 55.000 16.84 0.00 39.03 3.67
2098 2602 2.125229 TCCTCCTCCTCGTCGTCG 60.125 66.667 0.00 0.00 38.55 5.12
2102 2606 2.462782 CGTCGTCCTCCTCCTCGTC 61.463 68.421 0.00 0.00 0.00 4.20
2103 2607 2.436292 CGTCGTCCTCCTCCTCGT 60.436 66.667 0.00 0.00 0.00 4.18
2104 2608 2.125229 TCGTCGTCCTCCTCCTCG 60.125 66.667 0.00 0.00 0.00 4.63
2105 2609 1.078285 ACTCGTCGTCCTCCTCCTC 60.078 63.158 0.00 0.00 0.00 3.71
2106 2610 1.377463 CACTCGTCGTCCTCCTCCT 60.377 63.158 0.00 0.00 0.00 3.69
2107 2611 3.053849 GCACTCGTCGTCCTCCTCC 62.054 68.421 0.00 0.00 0.00 4.30
2210 2720 4.681978 GTCGTGCTTGTCGCCCCT 62.682 66.667 0.00 0.00 38.05 4.79
2336 2846 1.987770 GCAAATGCTGGACATGTTTCG 59.012 47.619 0.00 0.00 39.60 3.46
2341 2851 2.095213 GCAAATGCAAATGCTGGACATG 59.905 45.455 17.14 0.00 42.66 3.21
2342 2852 2.352388 GCAAATGCAAATGCTGGACAT 58.648 42.857 17.14 0.00 42.66 3.06
2343 2853 1.798283 GCAAATGCAAATGCTGGACA 58.202 45.000 17.14 0.00 42.66 4.02
2390 2920 2.209690 TAGTTTAAGCCCAGCAACCC 57.790 50.000 0.00 0.00 0.00 4.11
2433 3004 9.533831 GATTAAGGTTGTTATTATCCATCCCAT 57.466 33.333 0.00 0.00 0.00 4.00
2531 3102 3.606886 CGATCGATCGGGGGAAAAT 57.393 52.632 34.54 0.00 45.93 1.82
2613 3194 2.706555 TCACGAGTGCAGTGAAGTAG 57.293 50.000 0.00 0.00 44.56 2.57
2619 3200 3.062639 GGAAATACATCACGAGTGCAGTG 59.937 47.826 0.00 0.00 40.71 3.66
2694 3276 1.230324 GCAAGCCGATGGTAGAATCC 58.770 55.000 0.00 0.00 0.00 3.01
2699 3281 1.392589 AAATGGCAAGCCGATGGTAG 58.607 50.000 6.60 0.00 39.42 3.18
2702 3284 0.531657 TGAAAATGGCAAGCCGATGG 59.468 50.000 6.60 0.00 39.42 3.51
2703 3285 2.589798 ATGAAAATGGCAAGCCGATG 57.410 45.000 6.60 0.00 39.42 3.84
2835 3431 0.031857 CCTATGTCTCGCTCTGCCTG 59.968 60.000 0.00 0.00 0.00 4.85
2838 3434 1.109920 TCCCCTATGTCTCGCTCTGC 61.110 60.000 0.00 0.00 0.00 4.26
2841 3437 0.037790 GCATCCCCTATGTCTCGCTC 60.038 60.000 0.00 0.00 37.93 5.03
2894 3490 0.387878 GATCGATCGCTGTAGGGCTG 60.388 60.000 11.09 0.00 0.00 4.85
2915 3511 2.280119 GCATCTATCCGTGCCGCA 60.280 61.111 0.00 0.00 35.35 5.69
2920 3524 1.788886 CGTCATGTGCATCTATCCGTG 59.211 52.381 0.00 0.00 0.00 4.94
2925 3529 6.260377 CAAAATCAACGTCATGTGCATCTAT 58.740 36.000 0.00 0.00 0.00 1.98
2933 3537 1.665735 GCGGCAAAATCAACGTCATGT 60.666 47.619 0.00 0.00 0.00 3.21
2935 3539 0.109319 GGCGGCAAAATCAACGTCAT 60.109 50.000 3.07 0.00 0.00 3.06
2957 3561 5.177529 CACGCATCGAGTAATGCATGAGG 62.178 52.174 0.00 0.00 45.98 3.86
2958 3562 2.097056 CACGCATCGAGTAATGCATGAG 60.097 50.000 0.00 0.00 45.98 2.90
2959 3563 1.860326 CACGCATCGAGTAATGCATGA 59.140 47.619 0.00 0.00 45.98 3.07
2968 3572 0.443869 GAAATGTGCACGCATCGAGT 59.556 50.000 13.13 0.00 0.00 4.18
2990 3594 6.469782 ACAATAATAGGTCTGCATTTTGGG 57.530 37.500 0.00 0.00 0.00 4.12
2991 3595 9.868277 TTTTACAATAATAGGTCTGCATTTTGG 57.132 29.630 0.00 0.00 0.00 3.28
2997 3601 8.726988 GTGAACTTTTACAATAATAGGTCTGCA 58.273 33.333 5.91 0.00 0.00 4.41
2998 3602 8.182227 GGTGAACTTTTACAATAATAGGTCTGC 58.818 37.037 5.91 0.00 0.00 4.26
3012 3617 9.881529 TGTTTCGTATTATTGGTGAACTTTTAC 57.118 29.630 0.00 0.00 0.00 2.01
3078 3684 0.881159 AGTCGATCGGCGGTCTAGAG 60.881 60.000 19.10 2.25 41.33 2.43
3079 3685 0.390492 TAGTCGATCGGCGGTCTAGA 59.610 55.000 19.10 6.10 41.33 2.43
3088 3694 1.573436 GGCGGTACTAGTCGATCGG 59.427 63.158 16.41 0.89 0.00 4.18
3092 3698 1.079197 TGACGGCGGTACTAGTCGA 60.079 57.895 19.21 0.00 39.29 4.20
3093 3699 1.086067 TCTGACGGCGGTACTAGTCG 61.086 60.000 13.24 12.75 43.03 4.18
3097 3703 1.796151 CGTTCTGACGGCGGTACTA 59.204 57.895 13.24 0.00 45.32 1.82
3122 3728 3.414700 GACTTGCCGACCTGTGCG 61.415 66.667 0.00 0.00 0.00 5.34
3133 3739 0.370273 CGATTGGTGTAGCGACTTGC 59.630 55.000 0.00 0.00 46.98 4.01
3134 3740 1.920574 CTCGATTGGTGTAGCGACTTG 59.079 52.381 0.00 0.00 0.00 3.16
3148 3754 2.611518 GCAGCAACTAGACACTCGATT 58.388 47.619 0.00 0.00 0.00 3.34
3150 3756 0.243907 GGCAGCAACTAGACACTCGA 59.756 55.000 0.00 0.00 0.00 4.04
3151 3757 1.073216 CGGCAGCAACTAGACACTCG 61.073 60.000 0.00 0.00 0.00 4.18
3170 3776 2.740714 GGCATGAACGTCGGCAGTC 61.741 63.158 0.00 0.00 0.00 3.51
3173 3779 2.281139 TTGGCATGAACGTCGGCA 60.281 55.556 0.00 0.00 0.00 5.69
3174 3780 2.123988 TTGTTGGCATGAACGTCGGC 62.124 55.000 0.00 0.00 0.00 5.54
3175 3781 0.110238 CTTGTTGGCATGAACGTCGG 60.110 55.000 0.00 0.00 0.00 4.79
3177 3783 3.236816 CATTCTTGTTGGCATGAACGTC 58.763 45.455 0.00 0.00 40.17 4.34
3178 3784 2.607771 GCATTCTTGTTGGCATGAACGT 60.608 45.455 0.00 0.00 40.17 3.99
3179 3785 1.987770 GCATTCTTGTTGGCATGAACG 59.012 47.619 0.00 0.00 40.17 3.95
3180 3786 3.029320 TGCATTCTTGTTGGCATGAAC 57.971 42.857 0.00 0.00 40.17 3.18
3182 3788 2.629137 ACTTGCATTCTTGTTGGCATGA 59.371 40.909 0.00 0.00 35.98 3.07
3183 3789 2.991190 GACTTGCATTCTTGTTGGCATG 59.009 45.455 0.00 0.00 35.98 4.06
3184 3790 2.895404 AGACTTGCATTCTTGTTGGCAT 59.105 40.909 0.00 0.00 35.98 4.40
3185 3791 2.309613 AGACTTGCATTCTTGTTGGCA 58.690 42.857 0.00 0.00 0.00 4.92
3186 3792 4.503741 TTAGACTTGCATTCTTGTTGGC 57.496 40.909 3.81 0.00 0.00 4.52
3187 3793 7.542130 GGTAAATTAGACTTGCATTCTTGTTGG 59.458 37.037 3.81 0.00 0.00 3.77
3188 3794 7.542130 GGGTAAATTAGACTTGCATTCTTGTTG 59.458 37.037 3.81 0.00 0.00 3.33
3189 3795 7.451566 AGGGTAAATTAGACTTGCATTCTTGTT 59.548 33.333 3.81 0.00 0.00 2.83
3190 3796 6.948309 AGGGTAAATTAGACTTGCATTCTTGT 59.052 34.615 3.81 0.00 0.00 3.16
3191 3797 7.396540 AGGGTAAATTAGACTTGCATTCTTG 57.603 36.000 3.81 0.00 0.00 3.02
3192 3798 7.093771 CCAAGGGTAAATTAGACTTGCATTCTT 60.094 37.037 3.81 0.00 37.72 2.52
3312 3918 9.258826 TGAAAATTCATCATCGAACAAACAAAT 57.741 25.926 0.00 0.00 31.01 2.32
3313 3919 8.640091 TGAAAATTCATCATCGAACAAACAAA 57.360 26.923 0.00 0.00 31.01 2.83
3314 3920 8.701540 CATGAAAATTCATCATCGAACAAACAA 58.298 29.630 5.68 0.00 45.62 2.83
3315 3921 8.081025 TCATGAAAATTCATCATCGAACAAACA 58.919 29.630 5.68 0.00 45.62 2.83
3316 3922 8.368126 GTCATGAAAATTCATCATCGAACAAAC 58.632 33.333 5.68 0.00 45.62 2.93
3317 3923 7.271008 CGTCATGAAAATTCATCATCGAACAAA 59.729 33.333 5.68 0.00 45.62 2.83
3318 3924 6.742264 CGTCATGAAAATTCATCATCGAACAA 59.258 34.615 5.68 0.00 45.62 2.83
3319 3925 6.091986 TCGTCATGAAAATTCATCATCGAACA 59.908 34.615 16.73 0.00 45.62 3.18
3320 3926 6.477742 TCGTCATGAAAATTCATCATCGAAC 58.522 36.000 16.73 7.52 45.62 3.95
3321 3927 6.534793 TCTCGTCATGAAAATTCATCATCGAA 59.465 34.615 18.24 11.72 45.62 3.71
3322 3928 6.042143 TCTCGTCATGAAAATTCATCATCGA 58.958 36.000 17.42 17.42 45.62 3.59
3323 3929 6.277918 TCTCGTCATGAAAATTCATCATCG 57.722 37.500 5.68 10.39 45.62 3.84
3324 3930 6.134730 GCTCTCGTCATGAAAATTCATCATC 58.865 40.000 5.68 0.22 45.62 2.92
3325 3931 5.587443 TGCTCTCGTCATGAAAATTCATCAT 59.413 36.000 5.68 1.82 45.62 2.45
3326 3932 4.937015 TGCTCTCGTCATGAAAATTCATCA 59.063 37.500 5.68 0.00 45.62 3.07
3327 3933 5.163824 TGTGCTCTCGTCATGAAAATTCATC 60.164 40.000 5.68 0.00 45.62 2.92
3329 3935 4.064388 TGTGCTCTCGTCATGAAAATTCA 58.936 39.130 0.00 0.00 42.14 2.57
3330 3936 4.668576 TGTGCTCTCGTCATGAAAATTC 57.331 40.909 0.00 0.00 0.00 2.17
3331 3937 5.220739 GCTATGTGCTCTCGTCATGAAAATT 60.221 40.000 0.00 0.00 38.95 1.82
3332 3938 4.272018 GCTATGTGCTCTCGTCATGAAAAT 59.728 41.667 0.00 0.00 38.95 1.82
3333 3939 3.618594 GCTATGTGCTCTCGTCATGAAAA 59.381 43.478 0.00 0.00 38.95 2.29
3334 3940 3.190079 GCTATGTGCTCTCGTCATGAAA 58.810 45.455 0.00 0.00 38.95 2.69
3335 3941 2.166254 TGCTATGTGCTCTCGTCATGAA 59.834 45.455 0.00 0.00 43.37 2.57
3336 3942 1.750778 TGCTATGTGCTCTCGTCATGA 59.249 47.619 0.00 0.00 43.37 3.07
3337 3943 2.125685 CTGCTATGTGCTCTCGTCATG 58.874 52.381 0.00 0.00 43.37 3.07
3338 3944 2.027385 TCTGCTATGTGCTCTCGTCAT 58.973 47.619 0.00 0.00 43.37 3.06
3339 3945 1.463674 TCTGCTATGTGCTCTCGTCA 58.536 50.000 0.00 0.00 43.37 4.35
3340 3946 2.791383 ATCTGCTATGTGCTCTCGTC 57.209 50.000 0.00 0.00 43.37 4.20
3341 3947 6.522625 AATATATCTGCTATGTGCTCTCGT 57.477 37.500 0.00 0.00 43.37 4.18
3342 3948 6.810676 ACAAATATATCTGCTATGTGCTCTCG 59.189 38.462 0.00 0.00 43.37 4.04
3343 3949 8.545229 AACAAATATATCTGCTATGTGCTCTC 57.455 34.615 0.00 0.00 43.37 3.20
3344 3950 8.781196 CAAACAAATATATCTGCTATGTGCTCT 58.219 33.333 0.00 0.00 43.37 4.09
3345 3951 8.777413 TCAAACAAATATATCTGCTATGTGCTC 58.223 33.333 0.00 0.00 43.37 4.26
3346 3952 8.562892 GTCAAACAAATATATCTGCTATGTGCT 58.437 33.333 0.00 0.00 43.37 4.40
3347 3953 7.805071 GGTCAAACAAATATATCTGCTATGTGC 59.195 37.037 0.00 0.00 43.25 4.57
3348 3954 8.292448 GGGTCAAACAAATATATCTGCTATGTG 58.708 37.037 0.00 0.00 0.00 3.21
3349 3955 8.220559 AGGGTCAAACAAATATATCTGCTATGT 58.779 33.333 0.00 0.00 0.00 2.29
3350 3956 8.627208 AGGGTCAAACAAATATATCTGCTATG 57.373 34.615 0.00 0.00 0.00 2.23
3351 3957 9.289782 GAAGGGTCAAACAAATATATCTGCTAT 57.710 33.333 0.00 0.00 0.00 2.97
3352 3958 8.494433 AGAAGGGTCAAACAAATATATCTGCTA 58.506 33.333 0.00 0.00 0.00 3.49
3353 3959 7.284034 CAGAAGGGTCAAACAAATATATCTGCT 59.716 37.037 0.00 0.00 0.00 4.24
3354 3960 7.420800 CAGAAGGGTCAAACAAATATATCTGC 58.579 38.462 0.00 0.00 0.00 4.26
3355 3961 7.420800 GCAGAAGGGTCAAACAAATATATCTG 58.579 38.462 0.00 0.00 34.15 2.90
3356 3962 6.260936 CGCAGAAGGGTCAAACAAATATATCT 59.739 38.462 0.00 0.00 0.00 1.98
3357 3963 6.430451 CGCAGAAGGGTCAAACAAATATATC 58.570 40.000 0.00 0.00 0.00 1.63
3358 3964 5.221048 GCGCAGAAGGGTCAAACAAATATAT 60.221 40.000 0.30 0.00 0.00 0.86
3359 3965 4.095782 GCGCAGAAGGGTCAAACAAATATA 59.904 41.667 0.30 0.00 0.00 0.86
3360 3966 3.119495 GCGCAGAAGGGTCAAACAAATAT 60.119 43.478 0.30 0.00 0.00 1.28
3361 3967 2.227865 GCGCAGAAGGGTCAAACAAATA 59.772 45.455 0.30 0.00 0.00 1.40
3362 3968 1.000274 GCGCAGAAGGGTCAAACAAAT 60.000 47.619 0.30 0.00 0.00 2.32
3363 3969 0.383949 GCGCAGAAGGGTCAAACAAA 59.616 50.000 0.30 0.00 0.00 2.83
3364 3970 1.452145 GGCGCAGAAGGGTCAAACAA 61.452 55.000 10.83 0.00 31.75 2.83
3365 3971 1.896660 GGCGCAGAAGGGTCAAACA 60.897 57.895 10.83 0.00 31.75 2.83
3366 3972 2.626780 GGGCGCAGAAGGGTCAAAC 61.627 63.158 10.83 0.00 33.32 2.93
3367 3973 1.485294 TAGGGCGCAGAAGGGTCAAA 61.485 55.000 10.83 0.00 33.32 2.69
3368 3974 1.899437 CTAGGGCGCAGAAGGGTCAA 61.899 60.000 10.83 0.00 33.32 3.18
3369 3975 2.284331 TAGGGCGCAGAAGGGTCA 60.284 61.111 10.83 0.00 33.32 4.02
3370 3976 1.900545 AACTAGGGCGCAGAAGGGTC 61.901 60.000 10.83 0.00 0.00 4.46
3371 3977 1.489560 AAACTAGGGCGCAGAAGGGT 61.490 55.000 10.83 0.00 0.00 4.34
3372 3978 1.026718 CAAACTAGGGCGCAGAAGGG 61.027 60.000 10.83 0.00 0.00 3.95
3373 3979 0.036388 TCAAACTAGGGCGCAGAAGG 60.036 55.000 10.83 0.00 0.00 3.46
3374 3980 2.029838 ATCAAACTAGGGCGCAGAAG 57.970 50.000 10.83 5.02 0.00 2.85
3375 3981 2.489938 AATCAAACTAGGGCGCAGAA 57.510 45.000 10.83 0.00 0.00 3.02
3376 3982 3.620427 TTAATCAAACTAGGGCGCAGA 57.380 42.857 10.83 0.00 0.00 4.26
3377 3983 4.900635 AATTAATCAAACTAGGGCGCAG 57.099 40.909 10.83 0.00 0.00 5.18
3378 3984 5.652994 AAAATTAATCAAACTAGGGCGCA 57.347 34.783 10.83 0.00 0.00 6.09
3379 3985 6.038936 TCCTAAAATTAATCAAACTAGGGCGC 59.961 38.462 0.00 0.00 0.00 6.53
3380 3986 7.562454 TCCTAAAATTAATCAAACTAGGGCG 57.438 36.000 0.00 0.00 0.00 6.13
3381 3987 9.355916 AGATCCTAAAATTAATCAAACTAGGGC 57.644 33.333 0.00 0.00 0.00 5.19
3385 3991 9.131791 GGCCAGATCCTAAAATTAATCAAACTA 57.868 33.333 0.00 0.00 0.00 2.24
3386 3992 7.069950 GGGCCAGATCCTAAAATTAATCAAACT 59.930 37.037 4.39 0.00 0.00 2.66
3387 3993 7.069950 AGGGCCAGATCCTAAAATTAATCAAAC 59.930 37.037 6.18 0.00 31.86 2.93
3388 3994 7.132128 AGGGCCAGATCCTAAAATTAATCAAA 58.868 34.615 6.18 0.00 31.86 2.69
3389 3995 6.682537 AGGGCCAGATCCTAAAATTAATCAA 58.317 36.000 6.18 0.00 31.86 2.57
3390 3996 6.279813 AGGGCCAGATCCTAAAATTAATCA 57.720 37.500 6.18 0.00 31.86 2.57
3391 3997 7.603180 AAAGGGCCAGATCCTAAAATTAATC 57.397 36.000 6.18 0.00 33.58 1.75
3392 3998 7.995052 AAAAGGGCCAGATCCTAAAATTAAT 57.005 32.000 6.18 0.00 33.58 1.40
3393 3999 7.093068 GGAAAAAGGGCCAGATCCTAAAATTAA 60.093 37.037 6.18 0.00 33.58 1.40
3394 4000 6.382859 GGAAAAAGGGCCAGATCCTAAAATTA 59.617 38.462 6.18 0.00 33.58 1.40
3395 4001 5.189736 GGAAAAAGGGCCAGATCCTAAAATT 59.810 40.000 6.18 0.00 33.58 1.82
3396 4002 4.716784 GGAAAAAGGGCCAGATCCTAAAAT 59.283 41.667 6.18 0.00 33.58 1.82
3397 4003 4.093743 GGAAAAAGGGCCAGATCCTAAAA 58.906 43.478 6.18 0.00 33.58 1.52
3398 4004 3.336694 AGGAAAAAGGGCCAGATCCTAAA 59.663 43.478 15.79 0.00 35.59 1.85
3399 4005 2.926329 AGGAAAAAGGGCCAGATCCTAA 59.074 45.455 15.79 0.00 35.59 2.69
3400 4006 2.573463 AGGAAAAAGGGCCAGATCCTA 58.427 47.619 15.79 0.00 35.59 2.94
3401 4007 1.387119 AGGAAAAAGGGCCAGATCCT 58.613 50.000 6.18 10.35 35.88 3.24
3402 4008 2.656002 GTAGGAAAAAGGGCCAGATCC 58.344 52.381 6.18 7.97 0.00 3.36
3403 4009 2.656002 GGTAGGAAAAAGGGCCAGATC 58.344 52.381 6.18 0.00 0.00 2.75
3404 4010 1.064685 CGGTAGGAAAAAGGGCCAGAT 60.065 52.381 6.18 0.00 0.00 2.90
3405 4011 0.326927 CGGTAGGAAAAAGGGCCAGA 59.673 55.000 6.18 0.00 0.00 3.86
3406 4012 1.313091 GCGGTAGGAAAAAGGGCCAG 61.313 60.000 6.18 0.00 0.00 4.85
3407 4013 1.303806 GCGGTAGGAAAAAGGGCCA 60.304 57.895 6.18 0.00 0.00 5.36
3408 4014 2.050350 GGCGGTAGGAAAAAGGGCC 61.050 63.158 0.00 0.00 0.00 5.80
3409 4015 2.404186 CGGCGGTAGGAAAAAGGGC 61.404 63.158 0.00 0.00 0.00 5.19
3410 4016 0.743345 CTCGGCGGTAGGAAAAAGGG 60.743 60.000 7.21 0.00 0.00 3.95
3411 4017 0.743345 CCTCGGCGGTAGGAAAAAGG 60.743 60.000 7.21 0.00 36.08 3.11
3412 4018 0.036671 ACCTCGGCGGTAGGAAAAAG 60.037 55.000 20.12 0.59 46.73 2.27
3413 4019 2.060370 ACCTCGGCGGTAGGAAAAA 58.940 52.632 20.12 0.00 46.73 1.94
3414 4020 3.795905 ACCTCGGCGGTAGGAAAA 58.204 55.556 20.12 0.00 46.73 2.29
3424 4030 3.379865 TACCGCCATCAACCTCGGC 62.380 63.158 0.00 0.00 45.23 5.54
3425 4031 1.227263 CTACCGCCATCAACCTCGG 60.227 63.158 0.00 0.00 46.61 4.63
3426 4032 1.227263 CCTACCGCCATCAACCTCG 60.227 63.158 0.00 0.00 0.00 4.63
3427 4033 0.539986 TTCCTACCGCCATCAACCTC 59.460 55.000 0.00 0.00 0.00 3.85
3428 4034 0.988832 TTTCCTACCGCCATCAACCT 59.011 50.000 0.00 0.00 0.00 3.50
3429 4035 1.092348 GTTTCCTACCGCCATCAACC 58.908 55.000 0.00 0.00 0.00 3.77
3430 4036 2.109425 AGTTTCCTACCGCCATCAAC 57.891 50.000 0.00 0.00 0.00 3.18
3431 4037 2.871096 AAGTTTCCTACCGCCATCAA 57.129 45.000 0.00 0.00 0.00 2.57
3432 4038 3.181458 GGATAAGTTTCCTACCGCCATCA 60.181 47.826 0.00 0.00 32.68 3.07
3433 4039 3.181458 TGGATAAGTTTCCTACCGCCATC 60.181 47.826 5.91 0.00 36.68 3.51
3434 4040 2.775384 TGGATAAGTTTCCTACCGCCAT 59.225 45.455 5.91 0.00 36.68 4.40
3435 4041 2.093341 GTGGATAAGTTTCCTACCGCCA 60.093 50.000 0.00 0.00 36.68 5.69
3436 4042 2.558378 GTGGATAAGTTTCCTACCGCC 58.442 52.381 0.00 0.00 36.68 6.13
3437 4043 2.199236 CGTGGATAAGTTTCCTACCGC 58.801 52.381 0.00 0.00 36.68 5.68
3438 4044 3.119388 TGACGTGGATAAGTTTCCTACCG 60.119 47.826 0.00 7.32 36.68 4.02
3439 4045 4.430908 CTGACGTGGATAAGTTTCCTACC 58.569 47.826 0.00 0.00 36.68 3.18
3440 4046 3.864003 GCTGACGTGGATAAGTTTCCTAC 59.136 47.826 0.00 3.07 36.68 3.18
3441 4047 3.428452 CGCTGACGTGGATAAGTTTCCTA 60.428 47.826 0.00 0.00 36.68 2.94
3442 4048 2.674177 CGCTGACGTGGATAAGTTTCCT 60.674 50.000 0.00 0.00 36.68 3.36
3443 4049 1.659098 CGCTGACGTGGATAAGTTTCC 59.341 52.381 0.00 0.00 36.24 3.13


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.