Multiple sequence alignment - TraesCS4B01G038600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G038600 chr4B 100.000 4367 0 0 1 4367 27797789 27793423 0.000000e+00 8065.0
1 TraesCS4B01G038600 chr4D 95.512 2696 98 6 831 3508 15967401 15964711 0.000000e+00 4287.0
2 TraesCS4B01G038600 chr4D 94.931 434 17 4 1 432 16007308 16006878 0.000000e+00 675.0
3 TraesCS4B01G038600 chr4A 95.035 2578 111 9 942 3510 584522587 584520018 0.000000e+00 4036.0
4 TraesCS4B01G038600 chr4A 93.720 414 25 1 1 413 584523574 584523161 1.730000e-173 619.0
5 TraesCS4B01G038600 chr4A 84.110 472 34 17 3623 4061 584519957 584519494 6.750000e-113 418.0
6 TraesCS4B01G038600 chr4A 93.443 122 6 2 4246 4367 584519226 584519107 3.470000e-41 180.0
7 TraesCS4B01G038600 chr4A 95.349 86 3 1 498 582 584523145 584523060 7.620000e-28 135.0
8 TraesCS4B01G038600 chr7D 96.774 31 1 0 1021 1051 212205932 212205962 8.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G038600 chr4B 27793423 27797789 4366 True 8065.0 8065 100.0000 1 4367 1 chr4B.!!$R1 4366
1 TraesCS4B01G038600 chr4D 15964711 15967401 2690 True 4287.0 4287 95.5120 831 3508 1 chr4D.!!$R1 2677
2 TraesCS4B01G038600 chr4A 584519107 584523574 4467 True 1077.6 4036 92.3314 1 4367 5 chr4A.!!$R1 4366

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
787 883 0.033796 AGTGATGCATTGAGGTGGGG 60.034 55.0 0.00 0.00 0.00 4.96 F
804 900 0.101219 GGGATGAATGCGCCAACTTC 59.899 55.0 4.18 3.49 0.00 3.01 F
890 986 0.175073 GGGCCACCTGTAGTAGTTCG 59.825 60.0 4.39 0.00 0.00 3.95 F
2241 2360 0.253044 TGGGCTCTAGCACCAATGTC 59.747 55.0 0.94 0.00 45.73 3.06 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2172 2291 0.108424 CTCCTCGCAAGTCCTCAAGG 60.108 60.000 0.00 0.00 39.48 3.61 R
2333 2452 1.668337 CGAGAGAGTTCCAGCACACTG 60.668 57.143 0.00 0.00 44.05 3.66 R
2809 2928 0.598065 GGTGTCATTCCAGTTGCCAC 59.402 55.000 0.00 0.00 0.00 5.01 R
3526 3663 0.108615 CGATGTCTGGGCGGATATCC 60.109 60.000 12.14 12.14 32.58 2.59 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 28 9.593134 TTTTTACTGCACAGTTACAAATTTCAT 57.407 25.926 8.86 0.00 42.54 2.57
28 30 4.984161 ACTGCACAGTTACAAATTTCATGC 59.016 37.500 0.00 0.00 38.83 4.06
45 47 4.816392 TCATGCGCAGAACTAAGTTAGAA 58.184 39.130 18.32 0.00 0.00 2.10
52 54 6.154445 CGCAGAACTAAGTTAGAACTAACCA 58.846 40.000 16.89 8.18 44.79 3.67
54 56 7.201444 CGCAGAACTAAGTTAGAACTAACCATG 60.201 40.741 16.89 11.59 44.79 3.66
57 59 8.648693 AGAACTAAGTTAGAACTAACCATGTGT 58.351 33.333 16.89 9.46 44.79 3.72
76 78 1.732259 GTCTTTGTCAGGCATACACCG 59.268 52.381 0.00 0.00 33.69 4.94
87 89 5.893824 TCAGGCATACACCGATATGATATCT 59.106 40.000 10.44 0.00 34.94 1.98
170 172 6.308371 ACCTTGTTTGTAGTATTGTTTCCG 57.692 37.500 0.00 0.00 0.00 4.30
197 199 6.995091 GGATAGATAGAAAATGGTTCTGCAGT 59.005 38.462 14.67 0.00 0.00 4.40
245 247 3.186909 TCCTCACAAAATCGCTACATCG 58.813 45.455 0.00 0.00 0.00 3.84
252 254 5.611596 CACAAAATCGCTACATCGAAATACG 59.388 40.000 0.00 0.00 42.15 3.06
272 274 0.942962 GAATCATGCTTCTCGGCTGG 59.057 55.000 2.00 0.00 0.00 4.85
285 287 2.159382 TCGGCTGGTTCCTCATTTTTC 58.841 47.619 0.00 0.00 0.00 2.29
336 338 4.927425 CCTTGGAAAAAGATCAGCATTGTG 59.073 41.667 0.00 0.00 0.00 3.33
354 356 2.689471 TGTGCATGTGCTCACTTCTTTT 59.311 40.909 6.55 0.00 39.29 2.27
408 410 1.202114 GTGCTCCCAAATGCGATTTCA 59.798 47.619 0.00 0.00 0.00 2.69
413 415 3.355378 TCCCAAATGCGATTTCACTCAT 58.645 40.909 0.00 0.00 0.00 2.90
414 416 3.763360 TCCCAAATGCGATTTCACTCATT 59.237 39.130 0.00 0.00 0.00 2.57
418 420 6.324819 CCAAATGCGATTTCACTCATTAGTT 58.675 36.000 0.00 0.00 31.97 2.24
420 422 7.967854 CCAAATGCGATTTCACTCATTAGTTTA 59.032 33.333 0.00 0.00 31.97 2.01
421 423 9.507280 CAAATGCGATTTCACTCATTAGTTTAT 57.493 29.630 0.00 0.00 31.97 1.40
509 511 9.391006 TCACATTTTAAAGTTCACAAGTCTAGT 57.609 29.630 0.00 0.00 0.00 2.57
544 547 2.035066 GTGCAAACTTGGTTGAGATGCT 59.965 45.455 2.20 0.00 35.54 3.79
567 570 2.038295 CTCATATCTTCCTCCACTGCCC 59.962 54.545 0.00 0.00 0.00 5.36
582 585 0.679640 TGCCCGCCTCATAAGTTTGG 60.680 55.000 0.00 0.00 0.00 3.28
584 587 1.094785 CCCGCCTCATAAGTTTGGTG 58.905 55.000 0.00 0.00 0.00 4.17
585 588 0.451783 CCGCCTCATAAGTTTGGTGC 59.548 55.000 0.00 0.00 0.00 5.01
586 589 0.451783 CGCCTCATAAGTTTGGTGCC 59.548 55.000 0.00 0.00 0.00 5.01
587 590 0.451783 GCCTCATAAGTTTGGTGCCG 59.548 55.000 0.00 0.00 0.00 5.69
588 591 1.948611 GCCTCATAAGTTTGGTGCCGA 60.949 52.381 0.00 0.00 0.00 5.54
589 592 1.737793 CCTCATAAGTTTGGTGCCGAC 59.262 52.381 0.00 0.00 0.00 4.79
591 594 2.673368 CTCATAAGTTTGGTGCCGACTC 59.327 50.000 0.00 0.00 0.00 3.36
592 595 1.393539 CATAAGTTTGGTGCCGACTCG 59.606 52.381 0.00 0.00 0.00 4.18
593 596 0.947180 TAAGTTTGGTGCCGACTCGC 60.947 55.000 0.00 0.00 0.00 5.03
594 597 2.933878 AAGTTTGGTGCCGACTCGCA 62.934 55.000 0.00 0.00 36.08 5.10
597 600 1.573829 TTTGGTGCCGACTCGCATTC 61.574 55.000 0.00 0.00 41.70 2.67
599 602 2.456119 GGTGCCGACTCGCATTCTG 61.456 63.158 0.00 0.00 41.70 3.02
601 604 2.892425 GCCGACTCGCATTCTGGG 60.892 66.667 0.00 0.00 0.00 4.45
603 606 1.079127 CCGACTCGCATTCTGGGTT 60.079 57.895 0.00 0.00 0.00 4.11
604 607 1.084370 CCGACTCGCATTCTGGGTTC 61.084 60.000 0.00 0.00 0.00 3.62
605 608 1.084370 CGACTCGCATTCTGGGTTCC 61.084 60.000 0.00 0.00 0.00 3.62
606 609 0.744771 GACTCGCATTCTGGGTTCCC 60.745 60.000 0.12 0.12 0.00 3.97
607 610 1.201429 ACTCGCATTCTGGGTTCCCT 61.201 55.000 9.43 0.00 0.00 4.20
609 612 0.909610 TCGCATTCTGGGTTCCCTCT 60.910 55.000 9.43 0.00 0.00 3.69
610 613 0.035056 CGCATTCTGGGTTCCCTCTT 60.035 55.000 9.43 0.00 0.00 2.85
612 615 2.355716 CGCATTCTGGGTTCCCTCTTTA 60.356 50.000 9.43 0.00 0.00 1.85
613 616 3.017442 GCATTCTGGGTTCCCTCTTTAC 58.983 50.000 9.43 0.00 0.00 2.01
614 617 3.561313 GCATTCTGGGTTCCCTCTTTACA 60.561 47.826 9.43 0.00 0.00 2.41
615 618 3.782656 TTCTGGGTTCCCTCTTTACAC 57.217 47.619 9.43 0.00 0.00 2.90
616 619 2.986050 TCTGGGTTCCCTCTTTACACT 58.014 47.619 9.43 0.00 0.00 3.55
618 621 3.072476 TCTGGGTTCCCTCTTTACACTTG 59.928 47.826 9.43 0.00 0.00 3.16
619 622 2.107552 TGGGTTCCCTCTTTACACTTGG 59.892 50.000 9.43 0.00 0.00 3.61
621 624 3.146847 GGTTCCCTCTTTACACTTGGTG 58.853 50.000 0.00 0.00 39.75 4.17
633 636 1.343069 ACTTGGTGTGAGACTCTCCC 58.657 55.000 3.68 4.83 0.00 4.30
635 638 1.548269 CTTGGTGTGAGACTCTCCCTC 59.452 57.143 3.68 0.00 0.00 4.30
637 640 1.316706 GGTGTGAGACTCTCCCTCCG 61.317 65.000 3.68 0.00 0.00 4.63
638 641 0.609681 GTGTGAGACTCTCCCTCCGT 60.610 60.000 3.68 0.00 0.00 4.69
639 642 0.112606 TGTGAGACTCTCCCTCCGTT 59.887 55.000 3.68 0.00 0.00 4.44
640 643 0.528470 GTGAGACTCTCCCTCCGTTG 59.472 60.000 3.68 0.00 0.00 4.10
641 644 0.612174 TGAGACTCTCCCTCCGTTGG 60.612 60.000 3.68 0.00 0.00 3.77
642 645 0.612453 GAGACTCTCCCTCCGTTGGT 60.612 60.000 0.00 0.00 0.00 3.67
643 646 0.612453 AGACTCTCCCTCCGTTGGTC 60.612 60.000 0.00 0.00 0.00 4.02
645 648 0.612453 ACTCTCCCTCCGTTGGTCTC 60.612 60.000 0.00 0.00 0.00 3.36
646 649 1.305046 TCTCCCTCCGTTGGTCTCC 60.305 63.158 0.00 0.00 0.00 3.71
648 651 0.978146 CTCCCTCCGTTGGTCTCCAT 60.978 60.000 0.00 0.00 31.53 3.41
651 747 1.070758 CCCTCCGTTGGTCTCCATATG 59.929 57.143 0.00 0.00 31.53 1.78
652 748 1.070758 CCTCCGTTGGTCTCCATATGG 59.929 57.143 16.25 16.25 31.53 2.74
654 750 0.535102 CCGTTGGTCTCCATATGGCC 60.535 60.000 17.58 12.97 31.53 5.36
656 752 0.846693 GTTGGTCTCCATATGGCCCT 59.153 55.000 17.58 0.00 31.53 5.19
659 755 1.494721 TGGTCTCCATATGGCCCTTTC 59.505 52.381 17.58 5.01 34.44 2.62
660 756 1.494721 GGTCTCCATATGGCCCTTTCA 59.505 52.381 17.58 0.00 34.44 2.69
663 759 3.823304 GTCTCCATATGGCCCTTTCAATC 59.177 47.826 17.58 0.00 34.44 2.67
664 760 3.723681 TCTCCATATGGCCCTTTCAATCT 59.276 43.478 17.58 0.00 34.44 2.40
669 765 5.186409 CCATATGGCCCTTTCAATCTTATGG 59.814 44.000 9.29 0.00 32.89 2.74
670 766 4.541250 ATGGCCCTTTCAATCTTATGGA 57.459 40.909 0.00 0.00 0.00 3.41
677 773 7.066163 GGCCCTTTCAATCTTATGGAAAATTTG 59.934 37.037 0.00 0.00 30.87 2.32
678 774 7.066163 GCCCTTTCAATCTTATGGAAAATTTGG 59.934 37.037 0.00 0.00 30.87 3.28
679 775 7.553760 CCCTTTCAATCTTATGGAAAATTTGGG 59.446 37.037 0.00 0.00 30.70 4.12
685 781 9.669887 CAATCTTATGGAAAATTTGGGATTCAA 57.330 29.630 0.00 0.00 0.00 2.69
688 784 9.500785 TCTTATGGAAAATTTGGGATTCAAAAC 57.499 29.630 0.00 0.00 46.93 2.43
689 785 6.799926 ATGGAAAATTTGGGATTCAAAACG 57.200 33.333 0.00 0.00 46.93 3.60
690 786 5.675538 TGGAAAATTTGGGATTCAAAACGT 58.324 33.333 0.00 0.00 46.93 3.99
691 787 5.755861 TGGAAAATTTGGGATTCAAAACGTC 59.244 36.000 0.00 0.00 46.93 4.34
693 789 6.258947 GGAAAATTTGGGATTCAAAACGTCAA 59.741 34.615 0.00 0.00 46.93 3.18
694 790 6.843069 AAATTTGGGATTCAAAACGTCAAG 57.157 33.333 0.00 0.00 46.93 3.02
695 791 3.363341 TTGGGATTCAAAACGTCAAGC 57.637 42.857 0.00 0.00 31.46 4.01
696 792 2.582052 TGGGATTCAAAACGTCAAGCT 58.418 42.857 0.00 0.00 0.00 3.74
698 794 3.383185 TGGGATTCAAAACGTCAAGCTTT 59.617 39.130 0.00 0.00 0.00 3.51
699 795 4.142049 TGGGATTCAAAACGTCAAGCTTTT 60.142 37.500 0.00 0.00 0.00 2.27
700 796 4.808895 GGGATTCAAAACGTCAAGCTTTTT 59.191 37.500 0.00 0.00 0.00 1.94
701 797 5.051039 GGGATTCAAAACGTCAAGCTTTTTC 60.051 40.000 0.00 0.00 0.00 2.29
702 798 5.331532 GGATTCAAAACGTCAAGCTTTTTCG 60.332 40.000 0.00 4.65 0.00 3.46
703 799 3.430931 TCAAAACGTCAAGCTTTTTCGG 58.569 40.909 15.60 4.13 0.00 4.30
704 800 1.835121 AAACGTCAAGCTTTTTCGGC 58.165 45.000 15.60 0.00 0.00 5.54
705 801 0.316689 AACGTCAAGCTTTTTCGGCG 60.317 50.000 0.00 0.00 34.52 6.46
706 802 2.074920 CGTCAAGCTTTTTCGGCGC 61.075 57.895 0.00 0.00 34.52 6.53
709 805 1.299773 CAAGCTTTTTCGGCGCCAA 60.300 52.632 28.98 16.98 34.52 4.52
710 806 1.299850 AAGCTTTTTCGGCGCCAAC 60.300 52.632 28.98 6.72 34.52 3.77
711 807 1.734388 AAGCTTTTTCGGCGCCAACT 61.734 50.000 28.98 9.09 34.52 3.16
712 808 1.299850 GCTTTTTCGGCGCCAACTT 60.300 52.632 28.98 0.00 0.00 2.66
713 809 1.275471 GCTTTTTCGGCGCCAACTTC 61.275 55.000 28.98 4.74 0.00 3.01
714 810 0.310854 CTTTTTCGGCGCCAACTTCT 59.689 50.000 28.98 0.00 0.00 2.85
716 812 1.837538 TTTTCGGCGCCAACTTCTCG 61.838 55.000 28.98 9.88 0.00 4.04
718 814 3.479269 CGGCGCCAACTTCTCGTC 61.479 66.667 28.98 0.00 0.00 4.20
719 815 3.479269 GGCGCCAACTTCTCGTCG 61.479 66.667 24.80 0.00 0.00 5.12
720 816 2.733593 GCGCCAACTTCTCGTCGT 60.734 61.111 0.00 0.00 0.00 4.34
721 817 3.000080 GCGCCAACTTCTCGTCGTG 62.000 63.158 0.00 0.00 0.00 4.35
722 818 2.853914 GCCAACTTCTCGTCGTGC 59.146 61.111 0.00 0.00 0.00 5.34
724 820 1.891060 GCCAACTTCTCGTCGTGCTG 61.891 60.000 0.00 0.00 0.00 4.41
725 821 0.597637 CCAACTTCTCGTCGTGCTGT 60.598 55.000 0.00 0.00 0.00 4.40
727 823 1.979469 CAACTTCTCGTCGTGCTGTAG 59.021 52.381 0.00 0.00 0.00 2.74
728 824 0.109689 ACTTCTCGTCGTGCTGTAGC 60.110 55.000 0.00 0.00 42.50 3.58
740 836 2.672961 GCTGTAGCACACCTCATGTA 57.327 50.000 0.00 0.00 40.64 2.29
743 839 3.941483 GCTGTAGCACACCTCATGTAATT 59.059 43.478 0.00 0.00 40.64 1.40
744 840 4.034510 GCTGTAGCACACCTCATGTAATTC 59.965 45.833 0.00 0.00 40.64 2.17
745 841 5.420725 TGTAGCACACCTCATGTAATTCT 57.579 39.130 0.00 0.00 40.64 2.40
747 843 4.833478 AGCACACCTCATGTAATTCTCT 57.167 40.909 0.00 0.00 40.64 3.10
748 844 4.764172 AGCACACCTCATGTAATTCTCTC 58.236 43.478 0.00 0.00 40.64 3.20
749 845 3.873952 GCACACCTCATGTAATTCTCTCC 59.126 47.826 0.00 0.00 40.64 3.71
751 847 5.491070 CACACCTCATGTAATTCTCTCCAA 58.509 41.667 0.00 0.00 40.64 3.53
752 848 5.352569 CACACCTCATGTAATTCTCTCCAAC 59.647 44.000 0.00 0.00 40.64 3.77
753 849 5.249393 ACACCTCATGTAATTCTCTCCAACT 59.751 40.000 0.00 0.00 40.88 3.16
755 851 6.983307 CACCTCATGTAATTCTCTCCAACTAG 59.017 42.308 0.00 0.00 0.00 2.57
756 852 6.670027 ACCTCATGTAATTCTCTCCAACTAGT 59.330 38.462 0.00 0.00 0.00 2.57
757 853 7.181125 ACCTCATGTAATTCTCTCCAACTAGTT 59.819 37.037 1.12 1.12 0.00 2.24
758 854 8.043710 CCTCATGTAATTCTCTCCAACTAGTTT 58.956 37.037 5.07 0.00 0.00 2.66
759 855 8.777865 TCATGTAATTCTCTCCAACTAGTTTG 57.222 34.615 5.07 2.38 34.63 2.93
771 867 5.424121 CAACTAGTTTGGTTCCTTGAGTG 57.576 43.478 5.07 0.00 0.00 3.51
773 869 5.568620 ACTAGTTTGGTTCCTTGAGTGAT 57.431 39.130 0.00 0.00 0.00 3.06
774 870 5.308825 ACTAGTTTGGTTCCTTGAGTGATG 58.691 41.667 0.00 0.00 0.00 3.07
775 871 2.887152 AGTTTGGTTCCTTGAGTGATGC 59.113 45.455 0.00 0.00 0.00 3.91
777 873 2.885135 TGGTTCCTTGAGTGATGCAT 57.115 45.000 0.00 0.00 0.00 3.96
779 875 2.821378 TGGTTCCTTGAGTGATGCATTG 59.179 45.455 0.00 0.00 0.00 2.82
780 876 3.084039 GGTTCCTTGAGTGATGCATTGA 58.916 45.455 0.00 0.00 0.00 2.57
781 877 3.128242 GGTTCCTTGAGTGATGCATTGAG 59.872 47.826 0.00 0.00 0.00 3.02
784 880 2.422479 CCTTGAGTGATGCATTGAGGTG 59.578 50.000 0.00 0.00 0.00 4.00
786 882 1.340308 TGAGTGATGCATTGAGGTGGG 60.340 52.381 0.00 0.00 0.00 4.61
787 883 0.033796 AGTGATGCATTGAGGTGGGG 60.034 55.000 0.00 0.00 0.00 4.96
790 886 1.325355 GATGCATTGAGGTGGGGATG 58.675 55.000 0.00 0.00 0.00 3.51
791 887 0.928505 ATGCATTGAGGTGGGGATGA 59.071 50.000 0.00 0.00 0.00 2.92
794 890 1.684983 GCATTGAGGTGGGGATGAATG 59.315 52.381 0.00 0.00 0.00 2.67
795 891 1.684983 CATTGAGGTGGGGATGAATGC 59.315 52.381 0.00 0.00 0.00 3.56
796 892 0.394216 TTGAGGTGGGGATGAATGCG 60.394 55.000 0.00 0.00 0.00 4.73
797 893 2.124151 AGGTGGGGATGAATGCGC 60.124 61.111 0.00 0.00 0.00 6.09
798 894 3.219198 GGTGGGGATGAATGCGCC 61.219 66.667 4.18 0.00 38.71 6.53
799 895 2.440065 GTGGGGATGAATGCGCCA 60.440 61.111 4.18 0.00 44.84 5.69
800 896 2.358227 TGGGGATGAATGCGCCAA 59.642 55.556 4.18 0.00 44.19 4.52
801 897 2.051518 TGGGGATGAATGCGCCAAC 61.052 57.895 4.18 0.00 44.19 3.77
802 898 1.754234 GGGGATGAATGCGCCAACT 60.754 57.895 4.18 0.00 38.18 3.16
803 899 1.322538 GGGGATGAATGCGCCAACTT 61.323 55.000 4.18 0.00 38.18 2.66
804 900 0.101219 GGGATGAATGCGCCAACTTC 59.899 55.000 4.18 3.49 0.00 3.01
806 902 2.288666 GGATGAATGCGCCAACTTCTA 58.711 47.619 4.18 0.00 0.00 2.10
807 903 2.880890 GGATGAATGCGCCAACTTCTAT 59.119 45.455 4.18 0.25 0.00 1.98
809 905 2.016318 TGAATGCGCCAACTTCTATGG 58.984 47.619 4.18 0.00 41.08 2.74
812 908 1.448985 TGCGCCAACTTCTATGGTTC 58.551 50.000 4.18 0.00 40.23 3.62
813 909 1.271108 TGCGCCAACTTCTATGGTTCA 60.271 47.619 4.18 0.00 40.23 3.18
814 910 2.017049 GCGCCAACTTCTATGGTTCAT 58.983 47.619 0.00 0.00 40.23 2.57
815 911 2.423538 GCGCCAACTTCTATGGTTCATT 59.576 45.455 0.00 0.00 40.23 2.57
816 912 3.119495 GCGCCAACTTCTATGGTTCATTT 60.119 43.478 0.00 0.00 40.23 2.32
817 913 4.618227 GCGCCAACTTCTATGGTTCATTTT 60.618 41.667 0.00 0.00 40.23 1.82
877 973 1.614413 TCACCGTTTAATTTGGGCCAC 59.386 47.619 5.23 0.00 0.00 5.01
878 974 0.970640 ACCGTTTAATTTGGGCCACC 59.029 50.000 5.23 0.00 37.24 4.61
879 975 1.262417 CCGTTTAATTTGGGCCACCT 58.738 50.000 5.23 0.00 37.76 4.00
880 976 1.067213 CCGTTTAATTTGGGCCACCTG 60.067 52.381 5.23 0.00 37.76 4.00
881 977 1.616374 CGTTTAATTTGGGCCACCTGT 59.384 47.619 5.23 0.00 37.76 4.00
890 986 0.175073 GGGCCACCTGTAGTAGTTCG 59.825 60.000 4.39 0.00 0.00 3.95
911 1007 1.279271 GTATGCTTATCCGGCCCAGAT 59.721 52.381 7.98 7.98 0.00 2.90
913 1009 0.976641 TGCTTATCCGGCCCAGATAG 59.023 55.000 0.00 6.46 0.00 2.08
914 1010 0.391793 GCTTATCCGGCCCAGATAGC 60.392 60.000 0.00 11.01 0.00 2.97
915 1011 1.270907 CTTATCCGGCCCAGATAGCT 58.729 55.000 0.00 0.00 0.00 3.32
916 1012 1.205893 CTTATCCGGCCCAGATAGCTC 59.794 57.143 0.00 0.00 0.00 4.09
917 1013 0.409876 TATCCGGCCCAGATAGCTCT 59.590 55.000 0.00 0.00 0.00 4.09
938 1035 0.598419 GAAGCAGCCCAGTTTTGTGC 60.598 55.000 0.00 0.00 0.00 4.57
986 1102 2.230750 ACGGTTTCCTTCCTAGTTCGAG 59.769 50.000 0.00 0.00 0.00 4.04
1722 1841 1.792993 CGTAAAATGCTCAGCTGCAGC 60.793 52.381 31.53 31.53 46.71 5.25
1747 1866 4.141482 TGAGGCCTAATGGTATCACCTTTC 60.141 45.833 4.42 0.00 39.58 2.62
1810 1929 2.438434 CCTTGTCCATCGTGGGGC 60.438 66.667 4.52 0.00 38.32 5.80
1954 2073 1.293498 GTGGTCTCGTGGACTGCAT 59.707 57.895 10.06 0.00 43.97 3.96
1998 2117 1.539929 GGTGATCTTGATGGAGCTCGG 60.540 57.143 7.83 0.00 0.00 4.63
2172 2291 2.105466 GCTCAGTGCCTGTGCTAGC 61.105 63.158 8.10 8.10 44.40 3.42
2209 2328 2.515071 GGAGCGAGGATCCATGCCT 61.515 63.158 20.84 8.87 38.12 4.75
2241 2360 0.253044 TGGGCTCTAGCACCAATGTC 59.747 55.000 0.94 0.00 45.73 3.06
2333 2452 1.681264 CACCCTCCCACAAAAGAACAC 59.319 52.381 0.00 0.00 0.00 3.32
2355 2474 0.598562 TGTGCTGGAACTCTCTCGTC 59.401 55.000 0.00 0.00 0.00 4.20
2502 2621 3.510719 TGCGCTAAAATCTTTCAATGCC 58.489 40.909 9.73 0.00 0.00 4.40
2711 2830 5.428131 AGAGCTCCAAGAGGATGTTTTATCT 59.572 40.000 10.93 0.00 44.70 1.98
2832 2951 2.299867 GGCAACTGGAATGACACCAAAT 59.700 45.455 0.00 0.00 36.95 2.32
2838 2957 2.557924 TGGAATGACACCAAATGAGCAC 59.442 45.455 0.00 0.00 34.25 4.40
2872 2991 4.724399 TCTTCTATTTGCTTGTTCCCACA 58.276 39.130 0.00 0.00 0.00 4.17
2952 3071 5.506708 TCACCTACAGAGAAGCACTATACA 58.493 41.667 0.00 0.00 0.00 2.29
3042 3161 6.101997 CCCAAGTAAATCAGAAGCAAATTCC 58.898 40.000 0.00 0.00 38.84 3.01
3060 3179 2.530151 TGGGCTGCCCTTCTGAGT 60.530 61.111 35.80 0.00 45.70 3.41
3072 3191 1.002033 CTTCTGAGTGCTTGCAACACC 60.002 52.381 21.03 15.42 38.87 4.16
3077 3196 1.946768 GAGTGCTTGCAACACCTACAA 59.053 47.619 21.03 0.00 38.87 2.41
3092 3211 5.121811 CACCTACAAGAATGAGGAGATTGG 58.878 45.833 0.00 0.00 34.24 3.16
3093 3212 4.133078 CCTACAAGAATGAGGAGATTGGC 58.867 47.826 0.00 0.00 31.45 4.52
3109 3228 2.046892 GCGAGAGGGCTGCAAAGA 60.047 61.111 0.50 0.00 0.00 2.52
3111 3230 1.593787 CGAGAGGGCTGCAAAGAGA 59.406 57.895 0.50 0.00 0.00 3.10
3159 3278 1.410517 GCAGGCTATGTGCTACTCTCA 59.589 52.381 0.00 0.00 42.39 3.27
3162 3281 3.868077 CAGGCTATGTGCTACTCTCAAAC 59.132 47.826 0.00 0.00 42.39 2.93
3414 3545 7.210873 CAGTGACAAAAGAACTTCTACTACCT 58.789 38.462 0.00 0.00 0.00 3.08
3415 3547 7.711339 CAGTGACAAAAGAACTTCTACTACCTT 59.289 37.037 0.00 0.00 0.00 3.50
3477 3614 7.989741 TGGAACTATTTCTGGAGAATGATCTTC 59.010 37.037 0.00 0.00 31.86 2.87
3488 3625 6.600822 TGGAGAATGATCTTCAGGAAATTGAC 59.399 38.462 0.00 0.00 36.20 3.18
3494 3631 7.444629 TGATCTTCAGGAAATTGACTTTGAG 57.555 36.000 0.00 0.00 0.00 3.02
3510 3647 1.809133 TGAGTCCCCTTGTGTTGGTA 58.191 50.000 0.00 0.00 0.00 3.25
3511 3648 1.418637 TGAGTCCCCTTGTGTTGGTAC 59.581 52.381 0.00 0.00 0.00 3.34
3513 3650 1.420138 AGTCCCCTTGTGTTGGTACTG 59.580 52.381 0.00 0.00 0.00 2.74
3514 3651 1.418637 GTCCCCTTGTGTTGGTACTGA 59.581 52.381 0.00 0.00 0.00 3.41
3515 3652 2.128535 TCCCCTTGTGTTGGTACTGAA 58.871 47.619 0.00 0.00 0.00 3.02
3516 3653 2.158726 TCCCCTTGTGTTGGTACTGAAC 60.159 50.000 0.00 0.00 0.00 3.18
3517 3654 2.158667 CCCCTTGTGTTGGTACTGAACT 60.159 50.000 8.97 0.00 0.00 3.01
3518 3655 3.071892 CCCCTTGTGTTGGTACTGAACTA 59.928 47.826 8.97 0.00 0.00 2.24
3519 3656 4.263331 CCCCTTGTGTTGGTACTGAACTAT 60.263 45.833 8.97 0.00 0.00 2.12
3520 3657 4.695455 CCCTTGTGTTGGTACTGAACTATG 59.305 45.833 8.97 3.07 0.00 2.23
3522 3659 5.995282 CCTTGTGTTGGTACTGAACTATGAA 59.005 40.000 8.97 0.00 0.00 2.57
3523 3660 6.147821 CCTTGTGTTGGTACTGAACTATGAAG 59.852 42.308 8.97 0.00 0.00 3.02
3524 3661 6.413783 TGTGTTGGTACTGAACTATGAAGA 57.586 37.500 8.97 0.00 0.00 2.87
3525 3662 6.822442 TGTGTTGGTACTGAACTATGAAGAA 58.178 36.000 8.97 0.00 0.00 2.52
3526 3663 6.929049 TGTGTTGGTACTGAACTATGAAGAAG 59.071 38.462 8.97 0.00 0.00 2.85
3528 3665 6.269077 TGTTGGTACTGAACTATGAAGAAGGA 59.731 38.462 8.97 0.00 0.00 3.36
3530 3667 8.475639 GTTGGTACTGAACTATGAAGAAGGATA 58.524 37.037 0.00 0.00 0.00 2.59
3531 3668 8.783660 TGGTACTGAACTATGAAGAAGGATAT 57.216 34.615 0.00 0.00 0.00 1.63
3532 3669 8.861086 TGGTACTGAACTATGAAGAAGGATATC 58.139 37.037 0.00 0.00 0.00 1.63
3533 3670 8.308207 GGTACTGAACTATGAAGAAGGATATCC 58.692 40.741 14.41 14.41 0.00 2.59
3534 3671 6.987386 ACTGAACTATGAAGAAGGATATCCG 58.013 40.000 16.21 1.22 42.08 4.18
3535 3672 5.784177 TGAACTATGAAGAAGGATATCCGC 58.216 41.667 16.21 12.22 42.08 5.54
3536 3673 4.810191 ACTATGAAGAAGGATATCCGCC 57.190 45.455 16.21 11.61 42.08 6.13
3537 3674 3.515901 ACTATGAAGAAGGATATCCGCCC 59.484 47.826 16.21 9.20 42.08 6.13
3538 3675 1.801242 TGAAGAAGGATATCCGCCCA 58.199 50.000 16.21 10.21 42.08 5.36
3539 3676 1.694150 TGAAGAAGGATATCCGCCCAG 59.306 52.381 16.21 0.00 42.08 4.45
3540 3677 1.971357 GAAGAAGGATATCCGCCCAGA 59.029 52.381 16.21 0.00 42.08 3.86
3541 3678 1.343069 AGAAGGATATCCGCCCAGAC 58.657 55.000 16.21 4.36 42.08 3.51
3542 3679 1.048601 GAAGGATATCCGCCCAGACA 58.951 55.000 16.21 0.00 42.08 3.41
3543 3680 1.625818 GAAGGATATCCGCCCAGACAT 59.374 52.381 16.21 0.00 42.08 3.06
3544 3681 1.270907 AGGATATCCGCCCAGACATC 58.729 55.000 16.21 0.00 42.08 3.06
3545 3682 0.108615 GGATATCCGCCCAGACATCG 60.109 60.000 5.86 0.00 0.00 3.84
3546 3683 0.888619 GATATCCGCCCAGACATCGA 59.111 55.000 0.00 0.00 0.00 3.59
3547 3684 0.891373 ATATCCGCCCAGACATCGAG 59.109 55.000 0.00 0.00 0.00 4.04
3558 3695 2.012673 AGACATCGAGCTGCAAATTCC 58.987 47.619 1.02 0.00 0.00 3.01
3573 3710 1.959042 ATTCCATAGCAGCTTCGTGG 58.041 50.000 0.00 7.54 0.00 4.94
3574 3711 0.744414 TTCCATAGCAGCTTCGTGGC 60.744 55.000 0.00 0.00 0.00 5.01
3584 3721 2.954753 CTTCGTGGCTGCGTTCACC 61.955 63.158 0.00 0.00 0.00 4.02
3585 3722 3.741830 TTCGTGGCTGCGTTCACCA 62.742 57.895 0.00 0.00 0.00 4.17
3588 3725 2.594303 TGGCTGCGTTCACCAAGG 60.594 61.111 0.00 0.00 0.00 3.61
3589 3726 2.281484 GGCTGCGTTCACCAAGGA 60.281 61.111 0.00 0.00 0.00 3.36
3590 3727 2.328099 GGCTGCGTTCACCAAGGAG 61.328 63.158 0.00 0.00 0.00 3.69
3591 3728 1.301716 GCTGCGTTCACCAAGGAGA 60.302 57.895 0.00 0.00 0.00 3.71
3592 3729 0.884704 GCTGCGTTCACCAAGGAGAA 60.885 55.000 0.00 0.00 0.00 2.87
3593 3730 1.813513 CTGCGTTCACCAAGGAGAAT 58.186 50.000 2.37 0.00 0.00 2.40
3594 3731 1.466167 CTGCGTTCACCAAGGAGAATG 59.534 52.381 12.39 12.39 35.71 2.67
3595 3732 1.071542 TGCGTTCACCAAGGAGAATGA 59.928 47.619 18.66 0.00 34.96 2.57
3596 3733 1.464997 GCGTTCACCAAGGAGAATGAC 59.535 52.381 18.66 8.94 34.96 3.06
3597 3734 1.726791 CGTTCACCAAGGAGAATGACG 59.273 52.381 11.58 4.26 34.96 4.35
3598 3735 2.076863 GTTCACCAAGGAGAATGACGG 58.923 52.381 2.37 0.00 0.00 4.79
3599 3736 0.613260 TCACCAAGGAGAATGACGGG 59.387 55.000 0.00 0.00 0.00 5.28
3600 3737 1.026718 CACCAAGGAGAATGACGGGC 61.027 60.000 0.00 0.00 0.00 6.13
3601 3738 1.201429 ACCAAGGAGAATGACGGGCT 61.201 55.000 0.00 0.00 0.00 5.19
3602 3739 0.830648 CCAAGGAGAATGACGGGCTA 59.169 55.000 0.00 0.00 0.00 3.93
3603 3740 1.417890 CCAAGGAGAATGACGGGCTAT 59.582 52.381 0.00 0.00 0.00 2.97
3604 3741 2.632996 CCAAGGAGAATGACGGGCTATA 59.367 50.000 0.00 0.00 0.00 1.31
3605 3742 3.261897 CCAAGGAGAATGACGGGCTATAT 59.738 47.826 0.00 0.00 0.00 0.86
3606 3743 4.263068 CCAAGGAGAATGACGGGCTATATT 60.263 45.833 0.00 0.00 0.00 1.28
3607 3744 5.308825 CAAGGAGAATGACGGGCTATATTT 58.691 41.667 0.00 0.00 0.00 1.40
3608 3745 6.464222 CAAGGAGAATGACGGGCTATATTTA 58.536 40.000 0.00 0.00 0.00 1.40
3609 3746 6.875972 AGGAGAATGACGGGCTATATTTAT 57.124 37.500 0.00 0.00 0.00 1.40
3610 3747 7.259088 AGGAGAATGACGGGCTATATTTATT 57.741 36.000 0.00 0.00 0.00 1.40
3611 3748 7.106239 AGGAGAATGACGGGCTATATTTATTG 58.894 38.462 0.00 0.00 0.00 1.90
3612 3749 6.183360 GGAGAATGACGGGCTATATTTATTGC 60.183 42.308 0.00 0.00 34.43 3.56
3613 3750 5.351465 AGAATGACGGGCTATATTTATTGCG 59.649 40.000 0.00 0.00 35.70 4.85
3614 3751 4.260139 TGACGGGCTATATTTATTGCGA 57.740 40.909 0.00 0.00 35.70 5.10
3615 3752 4.633175 TGACGGGCTATATTTATTGCGAA 58.367 39.130 0.00 0.00 35.70 4.70
3616 3753 5.057819 TGACGGGCTATATTTATTGCGAAA 58.942 37.500 0.00 0.00 35.70 3.46
3617 3754 5.703592 TGACGGGCTATATTTATTGCGAAAT 59.296 36.000 0.00 0.00 35.70 2.17
3618 3755 5.938322 ACGGGCTATATTTATTGCGAAATG 58.062 37.500 0.00 0.00 35.70 2.32
3619 3756 5.106317 ACGGGCTATATTTATTGCGAAATGG 60.106 40.000 0.00 0.00 35.70 3.16
3620 3757 5.102313 GGGCTATATTTATTGCGAAATGGC 58.898 41.667 0.00 0.00 35.70 4.40
3621 3758 5.105756 GGGCTATATTTATTGCGAAATGGCT 60.106 40.000 0.00 0.00 35.70 4.75
3643 3780 6.116126 GCTGAGTATACTTGGAAAATCTGGT 58.884 40.000 6.88 0.00 0.00 4.00
3644 3781 6.037610 GCTGAGTATACTTGGAAAATCTGGTG 59.962 42.308 6.88 0.00 0.00 4.17
3645 3782 7.016153 TGAGTATACTTGGAAAATCTGGTGT 57.984 36.000 6.88 0.00 0.00 4.16
3652 3789 9.975218 ATACTTGGAAAATCTGGTGTATTTAGT 57.025 29.630 0.00 0.00 0.00 2.24
3660 3797 4.929479 TCTGGTGTATTTAGTTGGCCAAT 58.071 39.130 23.66 13.16 0.00 3.16
3670 3807 6.418057 TTTAGTTGGCCAATGATTTTGAGT 57.582 33.333 23.66 0.56 0.00 3.41
3709 3846 2.069776 CTTCACCCTGCTCCTGGAA 58.930 57.895 0.00 0.00 0.00 3.53
3714 3851 0.038744 ACCCTGCTCCTGGAACATTG 59.961 55.000 0.00 0.00 38.20 2.82
3715 3852 0.329261 CCCTGCTCCTGGAACATTGA 59.671 55.000 0.00 0.00 38.20 2.57
3716 3853 1.272092 CCCTGCTCCTGGAACATTGAA 60.272 52.381 0.00 0.00 38.20 2.69
3717 3854 1.815003 CCTGCTCCTGGAACATTGAAC 59.185 52.381 0.00 0.00 38.20 3.18
3718 3855 2.507484 CTGCTCCTGGAACATTGAACA 58.493 47.619 0.00 0.00 38.20 3.18
3721 3858 4.661222 TGCTCCTGGAACATTGAACATTA 58.339 39.130 0.00 0.00 38.20 1.90
3722 3859 5.263599 TGCTCCTGGAACATTGAACATTAT 58.736 37.500 0.00 0.00 38.20 1.28
3724 3861 5.591877 GCTCCTGGAACATTGAACATTATCT 59.408 40.000 0.00 0.00 38.20 1.98
3725 3862 6.238593 GCTCCTGGAACATTGAACATTATCTC 60.239 42.308 0.00 0.00 38.20 2.75
3726 3863 6.122277 TCCTGGAACATTGAACATTATCTCC 58.878 40.000 0.00 0.00 38.20 3.71
3727 3864 6.069440 TCCTGGAACATTGAACATTATCTCCT 60.069 38.462 0.00 0.00 38.20 3.69
3729 3866 7.395190 TGGAACATTGAACATTATCTCCTTG 57.605 36.000 0.00 0.00 0.00 3.61
3730 3867 6.947733 TGGAACATTGAACATTATCTCCTTGT 59.052 34.615 0.00 0.00 0.00 3.16
3731 3868 8.106462 TGGAACATTGAACATTATCTCCTTGTA 58.894 33.333 0.00 0.00 0.00 2.41
3732 3869 9.125026 GGAACATTGAACATTATCTCCTTGTAT 57.875 33.333 0.00 0.00 0.00 2.29
3733 3870 9.941664 GAACATTGAACATTATCTCCTTGTATG 57.058 33.333 0.00 0.00 0.00 2.39
3734 3871 7.934457 ACATTGAACATTATCTCCTTGTATGC 58.066 34.615 0.00 0.00 0.00 3.14
3735 3872 7.776969 ACATTGAACATTATCTCCTTGTATGCT 59.223 33.333 0.00 0.00 0.00 3.79
3736 3873 9.276590 CATTGAACATTATCTCCTTGTATGCTA 57.723 33.333 0.00 0.00 0.00 3.49
3754 3891 4.769688 TGCTATTGATAACCTGGAGTGTG 58.230 43.478 0.00 0.00 0.00 3.82
3761 3898 2.640316 AACCTGGAGTGTGGACTTTC 57.360 50.000 0.00 0.00 30.16 2.62
3769 3906 0.947244 GTGTGGACTTTCCTGCTGTG 59.053 55.000 0.00 0.00 37.46 3.66
3770 3907 0.179020 TGTGGACTTTCCTGCTGTGG 60.179 55.000 0.00 0.00 37.46 4.17
3835 3977 0.976641 AACGGGACTCAGCATTCTCA 59.023 50.000 0.00 0.00 0.00 3.27
3843 3985 1.991264 CTCAGCATTCTCAGTGTCGTG 59.009 52.381 0.00 0.00 0.00 4.35
3849 3991 2.309528 TTCTCAGTGTCGTGTTTGCT 57.690 45.000 0.00 0.00 0.00 3.91
3878 4020 2.290577 ACATCTTTTCTGGGCTCCACTC 60.291 50.000 0.00 0.00 0.00 3.51
3882 4024 1.276622 TTTCTGGGCTCCACTCCTAC 58.723 55.000 0.00 0.00 0.00 3.18
3902 4044 2.485426 ACGCATTGATTTGTCTGACCAG 59.515 45.455 5.17 0.00 0.00 4.00
3907 4049 2.229792 TGATTTGTCTGACCAGTTGGC 58.770 47.619 5.17 0.00 39.32 4.52
3909 4051 2.363306 TTTGTCTGACCAGTTGGCAT 57.637 45.000 5.17 0.00 39.32 4.40
3932 4081 7.448469 GCATGGTTTGGAGGATGTAAATATACT 59.552 37.037 0.00 0.00 32.98 2.12
3940 4089 9.877222 TGGAGGATGTAAATATACTACAGAAGA 57.123 33.333 4.45 0.00 32.96 2.87
3973 4142 0.250901 AAGCCTGCCCTAGTGTGTTG 60.251 55.000 0.00 0.00 0.00 3.33
3977 4146 1.202879 CCTGCCCTAGTGTGTTGGAAA 60.203 52.381 0.00 0.00 0.00 3.13
3978 4147 2.555227 CCTGCCCTAGTGTGTTGGAAAT 60.555 50.000 0.00 0.00 0.00 2.17
3979 4148 3.157087 CTGCCCTAGTGTGTTGGAAATT 58.843 45.455 0.00 0.00 0.00 1.82
3980 4149 3.571590 TGCCCTAGTGTGTTGGAAATTT 58.428 40.909 0.00 0.00 0.00 1.82
3981 4150 3.320541 TGCCCTAGTGTGTTGGAAATTTG 59.679 43.478 0.00 0.00 0.00 2.32
3982 4151 3.306019 GCCCTAGTGTGTTGGAAATTTGG 60.306 47.826 0.00 0.00 0.00 3.28
3983 4152 3.258123 CCCTAGTGTGTTGGAAATTTGGG 59.742 47.826 0.00 0.00 0.00 4.12
3984 4153 2.908688 AGTGTGTTGGAAATTTGGGC 57.091 45.000 0.00 0.00 0.00 5.36
3985 4154 2.397597 AGTGTGTTGGAAATTTGGGCT 58.602 42.857 0.00 0.00 0.00 5.19
4047 4223 2.163211 GGAGGAAAAGCTGCATCAAGTC 59.837 50.000 1.02 0.00 0.00 3.01
4056 4232 2.093467 GCTGCATCAAGTCGAGAAAGAC 59.907 50.000 0.00 0.00 41.23 3.01
4061 4237 1.540267 TCAAGTCGAGAAAGACCTCCG 59.460 52.381 0.00 0.00 41.83 4.63
4062 4238 0.244178 AAGTCGAGAAAGACCTCCGC 59.756 55.000 0.00 0.00 41.83 5.54
4063 4239 0.609681 AGTCGAGAAAGACCTCCGCT 60.610 55.000 0.00 0.00 41.83 5.52
4064 4240 0.179158 GTCGAGAAAGACCTCCGCTC 60.179 60.000 0.00 0.00 35.22 5.03
4065 4241 0.322636 TCGAGAAAGACCTCCGCTCT 60.323 55.000 0.00 0.00 0.00 4.09
4066 4242 0.528470 CGAGAAAGACCTCCGCTCTT 59.472 55.000 0.00 0.00 0.00 2.85
4067 4243 1.734047 CGAGAAAGACCTCCGCTCTTG 60.734 57.143 0.00 0.00 0.00 3.02
4068 4244 0.610687 AGAAAGACCTCCGCTCTTGG 59.389 55.000 0.00 0.00 0.00 3.61
4069 4245 0.608640 GAAAGACCTCCGCTCTTGGA 59.391 55.000 0.00 0.00 36.37 3.53
4070 4246 1.002087 GAAAGACCTCCGCTCTTGGAA 59.998 52.381 0.00 0.00 37.64 3.53
4071 4247 1.056660 AAGACCTCCGCTCTTGGAAA 58.943 50.000 0.00 0.00 37.64 3.13
4072 4248 1.056660 AGACCTCCGCTCTTGGAAAA 58.943 50.000 0.00 0.00 37.64 2.29
4073 4249 1.630878 AGACCTCCGCTCTTGGAAAAT 59.369 47.619 0.00 0.00 37.64 1.82
4074 4250 2.010497 GACCTCCGCTCTTGGAAAATC 58.990 52.381 0.00 0.00 37.64 2.17
4075 4251 1.351017 ACCTCCGCTCTTGGAAAATCA 59.649 47.619 0.00 0.00 37.64 2.57
4076 4252 2.025887 ACCTCCGCTCTTGGAAAATCAT 60.026 45.455 0.00 0.00 37.64 2.45
4077 4253 3.199946 ACCTCCGCTCTTGGAAAATCATA 59.800 43.478 0.00 0.00 37.64 2.15
4078 4254 3.812053 CCTCCGCTCTTGGAAAATCATAG 59.188 47.826 0.00 0.00 37.64 2.23
4079 4255 4.443457 CCTCCGCTCTTGGAAAATCATAGA 60.443 45.833 0.00 0.00 37.64 1.98
4080 4256 5.296151 TCCGCTCTTGGAAAATCATAGAT 57.704 39.130 0.00 0.00 34.30 1.98
4081 4257 5.300752 TCCGCTCTTGGAAAATCATAGATC 58.699 41.667 0.00 0.00 34.30 2.75
4082 4258 5.070981 TCCGCTCTTGGAAAATCATAGATCT 59.929 40.000 0.00 0.00 34.30 2.75
4083 4259 5.407995 CCGCTCTTGGAAAATCATAGATCTC 59.592 44.000 0.00 0.00 0.00 2.75
4084 4260 5.118357 CGCTCTTGGAAAATCATAGATCTCG 59.882 44.000 0.00 0.00 0.00 4.04
4085 4261 5.107143 GCTCTTGGAAAATCATAGATCTCGC 60.107 44.000 0.00 0.00 0.00 5.03
4086 4262 5.917462 TCTTGGAAAATCATAGATCTCGCA 58.083 37.500 0.00 0.00 0.00 5.10
4087 4263 6.348498 TCTTGGAAAATCATAGATCTCGCAA 58.652 36.000 0.00 0.00 0.00 4.85
4088 4264 6.481313 TCTTGGAAAATCATAGATCTCGCAAG 59.519 38.462 0.00 0.73 0.00 4.01
4089 4265 5.674525 TGGAAAATCATAGATCTCGCAAGT 58.325 37.500 0.00 0.00 39.48 3.16
4090 4266 5.755375 TGGAAAATCATAGATCTCGCAAGTC 59.245 40.000 0.00 0.00 39.48 3.01
4113 4289 5.819379 TCAGGTGTGATCATAATGCTTCTTC 59.181 40.000 0.00 0.00 0.00 2.87
4120 4296 7.228108 TGTGATCATAATGCTTCTTCTCCATTC 59.772 37.037 0.00 0.00 32.07 2.67
4121 4297 6.713903 TGATCATAATGCTTCTTCTCCATTCC 59.286 38.462 0.00 0.00 32.07 3.01
4143 4319 5.127194 TCCGTAATCTGCTCATTAACTGACT 59.873 40.000 0.00 0.00 0.00 3.41
4161 4337 5.648092 ACTGACTTATCCACATTTGGCTTAC 59.352 40.000 0.00 0.00 43.56 2.34
4168 4344 4.590918 TCCACATTTGGCTTACCGAATTA 58.409 39.130 0.00 0.00 46.40 1.40
4171 4347 5.331902 CACATTTGGCTTACCGAATTACTG 58.668 41.667 0.00 0.00 46.40 2.74
4177 4353 3.181487 GGCTTACCGAATTACTGTCCGTA 60.181 47.826 0.00 0.00 0.00 4.02
4178 4354 3.793492 GCTTACCGAATTACTGTCCGTAC 59.207 47.826 0.00 0.00 0.00 3.67
4197 4373 5.220529 CCGTACTTCGTTTTGACTTTTGAGT 60.221 40.000 0.00 0.00 37.94 3.41
4199 4375 4.412207 ACTTCGTTTTGACTTTTGAGTGC 58.588 39.130 0.00 0.00 0.00 4.40
4207 4383 3.006940 TGACTTTTGAGTGCGAACTGTT 58.993 40.909 0.00 0.00 0.00 3.16
4208 4384 4.185394 TGACTTTTGAGTGCGAACTGTTA 58.815 39.130 0.00 0.00 0.00 2.41
4221 4397 3.743269 CGAACTGTTAGGTTGGTGAGGTT 60.743 47.826 0.00 0.00 0.00 3.50
4223 4399 4.618920 ACTGTTAGGTTGGTGAGGTTAG 57.381 45.455 0.00 0.00 0.00 2.34
4224 4400 3.244457 ACTGTTAGGTTGGTGAGGTTAGC 60.244 47.826 0.00 0.00 0.00 3.09
4225 4401 2.039348 TGTTAGGTTGGTGAGGTTAGCC 59.961 50.000 0.00 0.00 0.00 3.93
4227 4403 0.770557 AGGTTGGTGAGGTTAGCCCA 60.771 55.000 0.00 0.00 34.66 5.36
4231 4412 0.828022 TGGTGAGGTTAGCCCATACG 59.172 55.000 0.00 0.00 34.66 3.06
4244 4425 2.285977 CCCATACGCTTCCAAACTACC 58.714 52.381 0.00 0.00 0.00 3.18
4276 4565 9.577110 TCACAATTTTGCTGAAGATCAAATATC 57.423 29.630 0.00 0.00 32.92 1.63
4279 4568 7.572523 ATTTTGCTGAAGATCAAATATCGGA 57.427 32.000 0.00 0.00 32.92 4.55
4319 4608 4.898607 ACCATCGGTGCTTGTGTT 57.101 50.000 0.00 0.00 32.98 3.32
4325 4614 0.380378 TCGGTGCTTGTGTTTCTTGC 59.620 50.000 0.00 0.00 0.00 4.01
4329 4618 1.678101 GTGCTTGTGTTTCTTGCCTCT 59.322 47.619 0.00 0.00 0.00 3.69
4330 4619 2.878406 GTGCTTGTGTTTCTTGCCTCTA 59.122 45.455 0.00 0.00 0.00 2.43
4332 4621 3.142174 GCTTGTGTTTCTTGCCTCTACT 58.858 45.455 0.00 0.00 0.00 2.57
4348 4637 4.058817 CTCTACTTCTGGTTTCGCTGTTT 58.941 43.478 0.00 0.00 0.00 2.83
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
5 6 4.984161 GCATGAAATTTGTAACTGTGCAGT 59.016 37.500 0.00 0.00 44.94 4.40
6 7 4.088923 CGCATGAAATTTGTAACTGTGCAG 59.911 41.667 0.00 0.00 0.00 4.41
7 8 3.980134 CGCATGAAATTTGTAACTGTGCA 59.020 39.130 0.00 0.00 0.00 4.57
8 9 3.181541 GCGCATGAAATTTGTAACTGTGC 60.182 43.478 0.30 0.56 0.00 4.57
9 10 3.980134 TGCGCATGAAATTTGTAACTGTG 59.020 39.130 5.66 0.00 0.00 3.66
10 11 4.023279 TCTGCGCATGAAATTTGTAACTGT 60.023 37.500 12.24 0.00 0.00 3.55
11 12 4.475028 TCTGCGCATGAAATTTGTAACTG 58.525 39.130 12.24 0.00 0.00 3.16
12 13 4.764679 TCTGCGCATGAAATTTGTAACT 57.235 36.364 12.24 0.00 0.00 2.24
13 14 4.917415 AGTTCTGCGCATGAAATTTGTAAC 59.083 37.500 12.24 3.51 0.00 2.50
26 28 4.252971 AGTTCTAACTTAGTTCTGCGCA 57.747 40.909 10.98 10.98 35.21 6.09
28 30 6.154445 TGGTTAGTTCTAACTTAGTTCTGCG 58.846 40.000 18.19 0.00 40.37 5.18
45 47 4.389374 CCTGACAAAGACACATGGTTAGT 58.611 43.478 0.00 0.00 0.00 2.24
52 54 3.753272 GTGTATGCCTGACAAAGACACAT 59.247 43.478 0.00 0.00 38.94 3.21
54 56 2.484264 GGTGTATGCCTGACAAAGACAC 59.516 50.000 0.00 0.00 38.64 3.67
57 59 1.621317 TCGGTGTATGCCTGACAAAGA 59.379 47.619 0.00 0.00 0.00 2.52
76 78 9.874205 CTTTTTCCTCCTCTCAGATATCATATC 57.126 37.037 5.32 0.00 0.00 1.63
87 89 1.073923 GCCACCTTTTTCCTCCTCTCA 59.926 52.381 0.00 0.00 0.00 3.27
164 166 5.705905 CCATTTTCTATCTATCCCCGGAAAC 59.294 44.000 0.73 0.00 0.00 2.78
170 172 5.707764 GCAGAACCATTTTCTATCTATCCCC 59.292 44.000 0.00 0.00 0.00 4.81
197 199 9.890629 ATAAATTCTACAGATCAGTAGTGCAAA 57.109 29.630 20.83 10.98 41.68 3.68
211 213 9.708222 CGATTTTGTGAGGAATAAATTCTACAG 57.292 33.333 2.91 0.00 37.00 2.74
245 247 4.084328 CCGAGAAGCATGATTCCGTATTTC 60.084 45.833 19.65 8.90 0.00 2.17
252 254 0.942962 CAGCCGAGAAGCATGATTCC 59.057 55.000 19.65 10.51 34.23 3.01
272 274 6.596309 ATGAAGAAGGGAAAAATGAGGAAC 57.404 37.500 0.00 0.00 0.00 3.62
285 287 1.815003 GCACACTCCAATGAAGAAGGG 59.185 52.381 0.00 0.00 0.00 3.95
312 314 3.881937 ATGCTGATCTTTTTCCAAGGC 57.118 42.857 0.00 0.00 0.00 4.35
336 338 3.968649 TCAAAAAGAAGTGAGCACATGC 58.031 40.909 3.19 0.00 42.49 4.06
342 344 9.547753 TCACCTATATATCAAAAAGAAGTGAGC 57.452 33.333 0.00 0.00 0.00 4.26
354 356 9.147732 ACTCTCACACATTCACCTATATATCAA 57.852 33.333 0.00 0.00 0.00 2.57
483 485 9.391006 ACTAGACTTGTGAACTTTAAAATGTGA 57.609 29.630 0.00 0.00 0.00 3.58
489 491 9.880157 ACAGTAACTAGACTTGTGAACTTTAAA 57.120 29.630 0.00 0.00 0.00 1.52
490 492 9.525409 GACAGTAACTAGACTTGTGAACTTTAA 57.475 33.333 0.00 0.00 0.00 1.52
491 493 8.910944 AGACAGTAACTAGACTTGTGAACTTTA 58.089 33.333 0.00 0.00 0.00 1.85
492 494 7.783042 AGACAGTAACTAGACTTGTGAACTTT 58.217 34.615 0.00 0.00 0.00 2.66
493 495 7.349412 AGACAGTAACTAGACTTGTGAACTT 57.651 36.000 0.00 0.00 0.00 2.66
494 496 6.963083 AGACAGTAACTAGACTTGTGAACT 57.037 37.500 0.00 0.00 0.00 3.01
495 497 6.360148 CGAAGACAGTAACTAGACTTGTGAAC 59.640 42.308 0.00 0.00 0.00 3.18
496 498 6.261603 TCGAAGACAGTAACTAGACTTGTGAA 59.738 38.462 0.00 0.00 0.00 3.18
509 511 4.377021 AGTTTGCACATCGAAGACAGTAA 58.623 39.130 0.00 0.00 42.51 2.24
544 547 2.103771 GCAGTGGAGGAAGATATGAGCA 59.896 50.000 0.00 0.00 0.00 4.26
567 570 0.451783 GGCACCAAACTTATGAGGCG 59.548 55.000 0.00 0.00 0.00 5.52
584 587 2.892425 CCCAGAATGCGAGTCGGC 60.892 66.667 15.52 7.33 31.97 5.54
585 588 1.079127 AACCCAGAATGCGAGTCGG 60.079 57.895 15.52 0.00 31.97 4.79
586 589 1.084370 GGAACCCAGAATGCGAGTCG 61.084 60.000 8.54 8.54 31.97 4.18
587 590 2.768834 GGAACCCAGAATGCGAGTC 58.231 57.895 0.00 0.00 31.97 3.36
601 604 3.564225 CACACCAAGTGTAAAGAGGGAAC 59.436 47.826 0.00 0.00 45.65 3.62
603 606 3.042682 TCACACCAAGTGTAAAGAGGGA 58.957 45.455 0.00 0.00 45.65 4.20
604 607 3.071023 TCTCACACCAAGTGTAAAGAGGG 59.929 47.826 11.52 0.00 45.65 4.30
605 608 4.058817 GTCTCACACCAAGTGTAAAGAGG 58.941 47.826 10.66 0.00 45.65 3.69
606 609 4.950050 AGTCTCACACCAAGTGTAAAGAG 58.050 43.478 10.66 8.93 45.65 2.85
607 610 4.649674 AGAGTCTCACACCAAGTGTAAAGA 59.350 41.667 1.94 4.36 45.65 2.52
609 612 4.202223 GGAGAGTCTCACACCAAGTGTAAA 60.202 45.833 21.53 0.00 45.65 2.01
610 613 3.321111 GGAGAGTCTCACACCAAGTGTAA 59.679 47.826 21.53 0.00 45.65 2.41
614 617 1.133009 AGGGAGAGTCTCACACCAAGT 60.133 52.381 24.21 0.00 36.16 3.16
615 618 1.548269 GAGGGAGAGTCTCACACCAAG 59.452 57.143 24.21 0.00 36.16 3.61
616 619 1.633774 GAGGGAGAGTCTCACACCAA 58.366 55.000 24.21 0.00 36.16 3.67
618 621 1.316706 CGGAGGGAGAGTCTCACACC 61.317 65.000 24.66 24.66 40.44 4.16
619 622 0.609681 ACGGAGGGAGAGTCTCACAC 60.610 60.000 24.21 17.67 36.16 3.82
621 624 0.528470 CAACGGAGGGAGAGTCTCAC 59.472 60.000 21.53 18.51 33.42 3.51
625 628 0.612453 AGACCAACGGAGGGAGAGTC 60.612 60.000 0.36 0.00 0.00 3.36
626 629 0.612453 GAGACCAACGGAGGGAGAGT 60.612 60.000 0.36 0.00 0.00 3.24
627 630 1.324005 GGAGACCAACGGAGGGAGAG 61.324 65.000 0.36 0.00 0.00 3.20
629 632 0.978146 ATGGAGACCAACGGAGGGAG 60.978 60.000 0.00 0.00 36.95 4.30
630 633 0.337082 TATGGAGACCAACGGAGGGA 59.663 55.000 0.00 0.00 36.95 4.20
632 635 1.070758 CCATATGGAGACCAACGGAGG 59.929 57.143 17.49 0.00 36.95 4.30
633 636 1.541233 GCCATATGGAGACCAACGGAG 60.541 57.143 26.47 0.00 36.95 4.63
635 638 0.535102 GGCCATATGGAGACCAACGG 60.535 60.000 26.47 0.00 36.95 4.44
637 640 0.846693 AGGGCCATATGGAGACCAAC 59.153 55.000 26.47 5.33 36.95 3.77
638 641 1.607225 AAGGGCCATATGGAGACCAA 58.393 50.000 26.47 0.00 36.95 3.67
639 642 1.494721 GAAAGGGCCATATGGAGACCA 59.505 52.381 26.47 0.00 38.19 4.02
640 643 1.494721 TGAAAGGGCCATATGGAGACC 59.505 52.381 26.47 21.49 37.39 3.85
641 644 3.297134 TTGAAAGGGCCATATGGAGAC 57.703 47.619 26.47 13.75 37.39 3.36
642 645 3.723681 AGATTGAAAGGGCCATATGGAGA 59.276 43.478 26.47 1.52 37.39 3.71
643 646 4.109877 AGATTGAAAGGGCCATATGGAG 57.890 45.455 26.47 0.00 37.39 3.86
645 648 5.186409 CCATAAGATTGAAAGGGCCATATGG 59.814 44.000 18.07 18.07 33.52 2.74
646 649 6.012113 TCCATAAGATTGAAAGGGCCATATG 58.988 40.000 6.18 0.00 0.00 1.78
648 651 5.661503 TCCATAAGATTGAAAGGGCCATA 57.338 39.130 6.18 0.00 0.00 2.74
651 747 5.675684 TTTTCCATAAGATTGAAAGGGCC 57.324 39.130 0.00 0.00 30.41 5.80
652 748 7.066163 CCAAATTTTCCATAAGATTGAAAGGGC 59.934 37.037 0.00 0.00 30.41 5.19
654 750 8.320617 TCCCAAATTTTCCATAAGATTGAAAGG 58.679 33.333 0.00 0.00 30.41 3.11
659 755 9.669887 TTGAATCCCAAATTTTCCATAAGATTG 57.330 29.630 0.00 0.00 0.00 2.67
663 759 8.442384 CGTTTTGAATCCCAAATTTTCCATAAG 58.558 33.333 0.00 0.00 43.59 1.73
664 760 7.934120 ACGTTTTGAATCCCAAATTTTCCATAA 59.066 29.630 0.00 0.00 43.59 1.90
669 765 6.836577 TGACGTTTTGAATCCCAAATTTTC 57.163 33.333 0.00 0.00 43.59 2.29
670 766 6.238347 GCTTGACGTTTTGAATCCCAAATTTT 60.238 34.615 0.00 0.00 43.59 1.82
677 773 3.643159 AAGCTTGACGTTTTGAATCCC 57.357 42.857 0.00 0.00 0.00 3.85
678 774 5.331532 CGAAAAAGCTTGACGTTTTGAATCC 60.332 40.000 0.00 0.00 39.60 3.01
679 775 5.331532 CCGAAAAAGCTTGACGTTTTGAATC 60.332 40.000 0.00 0.00 39.60 2.52
682 778 3.430931 CCGAAAAAGCTTGACGTTTTGA 58.569 40.909 0.00 0.00 39.60 2.69
685 781 1.835121 GCCGAAAAAGCTTGACGTTT 58.165 45.000 0.00 0.00 0.00 3.60
688 784 2.074920 GCGCCGAAAAAGCTTGACG 61.075 57.895 0.00 6.47 0.00 4.35
689 785 1.729484 GGCGCCGAAAAAGCTTGAC 60.729 57.895 12.58 0.00 0.00 3.18
690 786 1.729470 TTGGCGCCGAAAAAGCTTGA 61.729 50.000 23.90 0.00 0.00 3.02
691 787 1.299773 TTGGCGCCGAAAAAGCTTG 60.300 52.632 23.90 0.00 0.00 4.01
693 789 1.734388 AAGTTGGCGCCGAAAAAGCT 61.734 50.000 20.60 8.08 0.00 3.74
694 790 1.275471 GAAGTTGGCGCCGAAAAAGC 61.275 55.000 20.60 5.39 0.00 3.51
695 791 0.310854 AGAAGTTGGCGCCGAAAAAG 59.689 50.000 20.60 0.00 0.00 2.27
696 792 0.309612 GAGAAGTTGGCGCCGAAAAA 59.690 50.000 20.60 5.14 0.00 1.94
698 794 2.314647 CGAGAAGTTGGCGCCGAAA 61.315 57.895 20.60 6.51 0.00 3.46
699 795 2.736995 CGAGAAGTTGGCGCCGAA 60.737 61.111 20.60 12.78 0.00 4.30
700 796 3.909258 GACGAGAAGTTGGCGCCGA 62.909 63.158 23.90 19.26 0.00 5.54
701 797 3.479269 GACGAGAAGTTGGCGCCG 61.479 66.667 23.90 9.58 0.00 6.46
702 798 3.479269 CGACGAGAAGTTGGCGCC 61.479 66.667 22.73 22.73 0.00 6.53
703 799 2.733593 ACGACGAGAAGTTGGCGC 60.734 61.111 0.00 0.00 38.59 6.53
704 800 3.000080 GCACGACGAGAAGTTGGCG 62.000 63.158 0.00 0.00 38.59 5.69
705 801 1.664965 AGCACGACGAGAAGTTGGC 60.665 57.895 0.00 0.00 38.59 4.52
706 802 0.597637 ACAGCACGACGAGAAGTTGG 60.598 55.000 0.00 0.00 38.59 3.77
709 805 0.109689 GCTACAGCACGACGAGAAGT 60.110 55.000 0.00 0.00 41.59 3.01
710 806 2.643044 GCTACAGCACGACGAGAAG 58.357 57.895 0.00 0.00 41.59 2.85
711 807 4.861883 GCTACAGCACGACGAGAA 57.138 55.556 0.00 0.00 41.59 2.87
721 817 2.672961 TACATGAGGTGTGCTACAGC 57.327 50.000 0.00 9.53 46.20 4.40
722 818 5.423015 AGAATTACATGAGGTGTGCTACAG 58.577 41.667 0.00 0.00 42.24 2.74
724 820 5.665459 AGAGAATTACATGAGGTGTGCTAC 58.335 41.667 0.00 0.00 42.24 3.58
725 821 5.163405 GGAGAGAATTACATGAGGTGTGCTA 60.163 44.000 0.00 0.00 42.24 3.49
727 823 3.873952 GGAGAGAATTACATGAGGTGTGC 59.126 47.826 0.00 0.00 42.24 4.57
728 824 5.089970 TGGAGAGAATTACATGAGGTGTG 57.910 43.478 0.00 0.00 42.24 3.82
729 825 5.249393 AGTTGGAGAGAATTACATGAGGTGT 59.751 40.000 0.00 0.00 44.95 4.16
732 828 7.118496 ACTAGTTGGAGAGAATTACATGAGG 57.882 40.000 0.00 0.00 0.00 3.86
733 829 8.877779 CAAACTAGTTGGAGAGAATTACATGAG 58.122 37.037 9.34 0.00 33.18 2.90
734 830 8.777865 CAAACTAGTTGGAGAGAATTACATGA 57.222 34.615 9.34 0.00 33.18 3.07
749 845 5.123227 TCACTCAAGGAACCAAACTAGTTG 58.877 41.667 9.34 0.00 36.94 3.16
751 847 5.308825 CATCACTCAAGGAACCAAACTAGT 58.691 41.667 0.00 0.00 0.00 2.57
752 848 4.154918 GCATCACTCAAGGAACCAAACTAG 59.845 45.833 0.00 0.00 0.00 2.57
753 849 4.072131 GCATCACTCAAGGAACCAAACTA 58.928 43.478 0.00 0.00 0.00 2.24
755 851 2.622942 TGCATCACTCAAGGAACCAAAC 59.377 45.455 0.00 0.00 0.00 2.93
756 852 2.942804 TGCATCACTCAAGGAACCAAA 58.057 42.857 0.00 0.00 0.00 3.28
757 853 2.655090 TGCATCACTCAAGGAACCAA 57.345 45.000 0.00 0.00 0.00 3.67
758 854 2.821378 CAATGCATCACTCAAGGAACCA 59.179 45.455 0.00 0.00 0.00 3.67
759 855 3.084039 TCAATGCATCACTCAAGGAACC 58.916 45.455 0.00 0.00 0.00 3.62
760 856 3.128242 CCTCAATGCATCACTCAAGGAAC 59.872 47.826 0.00 0.00 0.00 3.62
763 859 2.422479 CACCTCAATGCATCACTCAAGG 59.578 50.000 0.00 3.71 0.00 3.61
764 860 2.422479 CCACCTCAATGCATCACTCAAG 59.578 50.000 0.00 0.00 0.00 3.02
766 862 1.340308 CCCACCTCAATGCATCACTCA 60.340 52.381 0.00 0.00 0.00 3.41
767 863 1.386533 CCCACCTCAATGCATCACTC 58.613 55.000 0.00 0.00 0.00 3.51
768 864 0.033796 CCCCACCTCAATGCATCACT 60.034 55.000 0.00 0.00 0.00 3.41
769 865 0.034186 TCCCCACCTCAATGCATCAC 60.034 55.000 0.00 0.00 0.00 3.06
770 866 0.928505 ATCCCCACCTCAATGCATCA 59.071 50.000 0.00 0.00 0.00 3.07
771 867 1.133699 TCATCCCCACCTCAATGCATC 60.134 52.381 0.00 0.00 0.00 3.91
773 869 0.703488 TTCATCCCCACCTCAATGCA 59.297 50.000 0.00 0.00 0.00 3.96
774 870 1.684983 CATTCATCCCCACCTCAATGC 59.315 52.381 0.00 0.00 0.00 3.56
775 871 1.684983 GCATTCATCCCCACCTCAATG 59.315 52.381 0.00 0.00 0.00 2.82
777 873 0.394216 CGCATTCATCCCCACCTCAA 60.394 55.000 0.00 0.00 0.00 3.02
779 875 2.189499 GCGCATTCATCCCCACCTC 61.189 63.158 0.30 0.00 0.00 3.85
780 876 2.124151 GCGCATTCATCCCCACCT 60.124 61.111 0.30 0.00 0.00 4.00
781 877 3.219198 GGCGCATTCATCCCCACC 61.219 66.667 10.83 0.00 0.00 4.61
784 880 1.322538 AAGTTGGCGCATTCATCCCC 61.323 55.000 10.83 0.00 0.00 4.81
786 882 1.098050 AGAAGTTGGCGCATTCATCC 58.902 50.000 10.83 0.00 0.00 3.51
787 883 3.304257 CCATAGAAGTTGGCGCATTCATC 60.304 47.826 10.83 1.17 0.00 2.92
790 886 2.017049 ACCATAGAAGTTGGCGCATTC 58.983 47.619 10.83 7.76 37.81 2.67
791 887 2.128771 ACCATAGAAGTTGGCGCATT 57.871 45.000 10.83 0.00 37.81 3.56
794 890 1.448985 TGAACCATAGAAGTTGGCGC 58.551 50.000 0.00 0.00 37.81 6.53
795 891 4.701956 AAATGAACCATAGAAGTTGGCG 57.298 40.909 0.00 0.00 37.81 5.69
816 912 5.342361 ACCATAGAACCCCCTTGTAAAAA 57.658 39.130 0.00 0.00 0.00 1.94
817 913 5.162969 TGAACCATAGAACCCCCTTGTAAAA 60.163 40.000 0.00 0.00 0.00 1.52
819 915 3.917629 TGAACCATAGAACCCCCTTGTAA 59.082 43.478 0.00 0.00 0.00 2.41
821 917 2.354328 TGAACCATAGAACCCCCTTGT 58.646 47.619 0.00 0.00 0.00 3.16
822 918 3.669939 ATGAACCATAGAACCCCCTTG 57.330 47.619 0.00 0.00 0.00 3.61
823 919 3.596046 TGAATGAACCATAGAACCCCCTT 59.404 43.478 0.00 0.00 0.00 3.95
824 920 3.197983 TGAATGAACCATAGAACCCCCT 58.802 45.455 0.00 0.00 0.00 4.79
826 922 3.381590 GCTTGAATGAACCATAGAACCCC 59.618 47.826 0.00 0.00 0.00 4.95
828 924 5.904362 AAGCTTGAATGAACCATAGAACC 57.096 39.130 0.00 0.00 0.00 3.62
830 926 6.603201 CCCTAAAGCTTGAATGAACCATAGAA 59.397 38.462 0.00 0.00 0.00 2.10
831 927 6.122277 CCCTAAAGCTTGAATGAACCATAGA 58.878 40.000 0.00 0.00 0.00 1.98
832 928 5.888161 ACCCTAAAGCTTGAATGAACCATAG 59.112 40.000 0.00 0.00 0.00 2.23
834 930 4.677182 ACCCTAAAGCTTGAATGAACCAT 58.323 39.130 0.00 0.00 0.00 3.55
877 973 4.650754 AAGCATACCGAACTACTACAGG 57.349 45.455 0.00 0.00 0.00 4.00
878 974 6.380190 GGATAAGCATACCGAACTACTACAG 58.620 44.000 0.00 0.00 0.00 2.74
879 975 6.323203 GGATAAGCATACCGAACTACTACA 57.677 41.667 0.00 0.00 0.00 2.74
890 986 0.321653 CTGGGCCGGATAAGCATACC 60.322 60.000 6.48 0.00 0.00 2.73
914 1010 2.746362 CAAAACTGGGCTGCTTCTAGAG 59.254 50.000 0.00 0.00 0.00 2.43
915 1011 2.106511 ACAAAACTGGGCTGCTTCTAGA 59.893 45.455 0.00 0.00 0.00 2.43
916 1012 2.227388 CACAAAACTGGGCTGCTTCTAG 59.773 50.000 0.00 0.00 0.00 2.43
917 1013 2.229792 CACAAAACTGGGCTGCTTCTA 58.770 47.619 0.00 0.00 0.00 2.10
968 1084 2.028385 TGGCTCGAACTAGGAAGGAAAC 60.028 50.000 0.00 0.00 0.00 2.78
986 1102 1.072015 CTCTCATTCTCCTCCCATGGC 59.928 57.143 6.09 0.00 0.00 4.40
1256 1375 1.456705 GAGGACGAGGAGGAGGCAT 60.457 63.158 0.00 0.00 0.00 4.40
1696 1815 3.624861 CAGCTGAGCATTTTACGGAAGAT 59.375 43.478 8.42 0.00 0.00 2.40
1701 1820 0.804364 TGCAGCTGAGCATTTTACGG 59.196 50.000 20.43 0.00 40.11 4.02
1722 1841 2.548067 GGTGATACCATTAGGCCTCACG 60.548 54.545 9.68 0.00 44.52 4.35
1747 1866 2.492019 CATGCCTTGATCATGCACAG 57.508 50.000 19.22 12.71 37.92 3.66
1810 1929 7.083858 TCAAAGAAGTTTGATTTAATCGCCAG 58.916 34.615 0.23 0.00 45.82 4.85
1954 2073 4.560128 GACTCAGAGTACACATCAAGCAA 58.440 43.478 2.00 0.00 0.00 3.91
1998 2117 0.803380 GCATTGCATCAAGAACCCGC 60.803 55.000 3.15 0.00 0.00 6.13
2097 2216 4.823442 CCATCAGCCAGCATTTGACTATAA 59.177 41.667 0.00 0.00 0.00 0.98
2100 2219 2.025981 ACCATCAGCCAGCATTTGACTA 60.026 45.455 0.00 0.00 0.00 2.59
2172 2291 0.108424 CTCCTCGCAAGTCCTCAAGG 60.108 60.000 0.00 0.00 39.48 3.61
2241 2360 4.037327 TCAATCAGAGAGCTGGATACGAAG 59.963 45.833 0.00 0.00 42.53 3.79
2283 2402 3.062099 TCGTTTGCGCATCTCTACATTTC 59.938 43.478 12.75 0.00 38.14 2.17
2286 2405 2.293677 TCGTTTGCGCATCTCTACAT 57.706 45.000 12.75 0.00 38.14 2.29
2333 2452 1.668337 CGAGAGAGTTCCAGCACACTG 60.668 57.143 0.00 0.00 44.05 3.66
2355 2474 3.635373 TCCCGTTGTAGCTATAACCTGAG 59.365 47.826 22.94 11.77 0.00 3.35
2481 2600 3.056962 TGGCATTGAAAGATTTTAGCGCA 60.057 39.130 11.47 0.00 0.00 6.09
2502 2621 2.676121 TGCCCCGAAGCCAACATG 60.676 61.111 0.00 0.00 0.00 3.21
2517 2636 2.100197 GTAATTTCCCCTGGAACCTGC 58.900 52.381 0.00 0.00 41.87 4.85
2711 2830 6.660521 AGTGACATCATTTCTTTCAGGCATTA 59.339 34.615 0.00 0.00 0.00 1.90
2809 2928 0.598065 GGTGTCATTCCAGTTGCCAC 59.402 55.000 0.00 0.00 0.00 5.01
2838 2957 8.857216 CAAGCAAATAGAAGAGCTAAAAATGTG 58.143 33.333 0.00 0.00 36.07 3.21
2872 2991 1.109323 GCTTGCTCCACCAAACCACT 61.109 55.000 0.00 0.00 0.00 4.00
2936 3055 6.753180 ACCATACATGTATAGTGCTTCTCTG 58.247 40.000 17.86 3.18 0.00 3.35
2952 3071 4.262207 CGAGCTAGGACATCAACCATACAT 60.262 45.833 0.00 0.00 0.00 2.29
3060 3179 2.340210 TCTTGTAGGTGTTGCAAGCA 57.660 45.000 0.00 0.00 45.73 3.91
3072 3191 3.806521 CGCCAATCTCCTCATTCTTGTAG 59.193 47.826 0.00 0.00 0.00 2.74
3077 3196 2.364970 CTCTCGCCAATCTCCTCATTCT 59.635 50.000 0.00 0.00 0.00 2.40
3092 3211 2.046892 TCTTTGCAGCCCTCTCGC 60.047 61.111 0.00 0.00 0.00 5.03
3093 3212 0.739112 GTCTCTTTGCAGCCCTCTCG 60.739 60.000 0.00 0.00 0.00 4.04
3109 3228 4.163427 TCCTTCTCCAACTCATGAAGTCT 58.837 43.478 0.00 0.00 37.17 3.24
3111 3230 6.627087 TTATCCTTCTCCAACTCATGAAGT 57.373 37.500 0.00 0.00 41.10 3.01
3162 3281 3.887110 ACCTTCCACATGATGCATACATG 59.113 43.478 25.01 25.01 46.96 3.21
3428 3560 7.455953 TCCATCTTGCTACCTATCTGTATGAAT 59.544 37.037 0.00 0.00 0.00 2.57
3430 3562 6.314917 TCCATCTTGCTACCTATCTGTATGA 58.685 40.000 0.00 0.00 0.00 2.15
3434 3566 4.965532 AGTTCCATCTTGCTACCTATCTGT 59.034 41.667 0.00 0.00 0.00 3.41
3435 3567 5.543507 AGTTCCATCTTGCTACCTATCTG 57.456 43.478 0.00 0.00 0.00 2.90
3436 3568 7.863901 AATAGTTCCATCTTGCTACCTATCT 57.136 36.000 0.00 0.00 0.00 1.98
3437 3569 8.371699 AGAAATAGTTCCATCTTGCTACCTATC 58.628 37.037 0.00 0.00 33.92 2.08
3438 3570 8.153550 CAGAAATAGTTCCATCTTGCTACCTAT 58.846 37.037 0.00 0.00 33.92 2.57
3439 3571 7.419057 CCAGAAATAGTTCCATCTTGCTACCTA 60.419 40.741 0.00 0.00 33.92 3.08
3477 3614 3.507622 GGGGACTCAAAGTCAATTTCCTG 59.492 47.826 9.16 0.00 46.79 3.86
3488 3625 1.956477 CCAACACAAGGGGACTCAAAG 59.044 52.381 0.00 0.00 42.68 2.77
3494 3631 1.418637 TCAGTACCAACACAAGGGGAC 59.581 52.381 0.00 0.00 38.36 4.46
3510 3647 6.517529 GCGGATATCCTTCTTCATAGTTCAGT 60.518 42.308 19.61 0.00 0.00 3.41
3511 3648 5.866633 GCGGATATCCTTCTTCATAGTTCAG 59.133 44.000 19.61 0.00 0.00 3.02
3513 3650 5.172205 GGCGGATATCCTTCTTCATAGTTC 58.828 45.833 19.61 0.00 0.00 3.01
3514 3651 4.020128 GGGCGGATATCCTTCTTCATAGTT 60.020 45.833 19.61 0.00 0.00 2.24
3515 3652 3.515901 GGGCGGATATCCTTCTTCATAGT 59.484 47.826 19.61 0.00 0.00 2.12
3516 3653 3.515502 TGGGCGGATATCCTTCTTCATAG 59.484 47.826 19.61 1.89 0.00 2.23
3517 3654 3.515502 CTGGGCGGATATCCTTCTTCATA 59.484 47.826 19.61 0.00 0.00 2.15
3518 3655 2.304180 CTGGGCGGATATCCTTCTTCAT 59.696 50.000 19.61 0.00 0.00 2.57
3519 3656 1.694150 CTGGGCGGATATCCTTCTTCA 59.306 52.381 19.61 9.40 0.00 3.02
3520 3657 1.971357 TCTGGGCGGATATCCTTCTTC 59.029 52.381 19.61 5.53 0.00 2.87
3522 3659 1.343069 GTCTGGGCGGATATCCTTCT 58.657 55.000 19.61 0.00 0.00 2.85
3523 3660 1.048601 TGTCTGGGCGGATATCCTTC 58.951 55.000 19.61 10.73 0.00 3.46
3524 3661 1.625818 GATGTCTGGGCGGATATCCTT 59.374 52.381 19.61 0.00 30.84 3.36
3525 3662 1.270907 GATGTCTGGGCGGATATCCT 58.729 55.000 19.61 0.00 30.84 3.24
3526 3663 0.108615 CGATGTCTGGGCGGATATCC 60.109 60.000 12.14 12.14 32.58 2.59
3528 3665 0.891373 CTCGATGTCTGGGCGGATAT 59.109 55.000 0.00 0.00 0.00 1.63
3530 3667 3.133014 CTCGATGTCTGGGCGGAT 58.867 61.111 0.00 0.00 0.00 4.18
3531 3668 3.838271 GCTCGATGTCTGGGCGGA 61.838 66.667 0.00 0.00 0.00 5.54
3532 3669 3.842923 AGCTCGATGTCTGGGCGG 61.843 66.667 0.00 0.00 0.00 6.13
3533 3670 2.584418 CAGCTCGATGTCTGGGCG 60.584 66.667 0.00 0.00 0.00 6.13
3534 3671 2.894387 GCAGCTCGATGTCTGGGC 60.894 66.667 10.25 0.00 0.00 5.36
3535 3672 0.674581 TTTGCAGCTCGATGTCTGGG 60.675 55.000 10.25 0.00 0.00 4.45
3536 3673 1.376543 ATTTGCAGCTCGATGTCTGG 58.623 50.000 10.25 0.00 0.00 3.86
3537 3674 2.223203 GGAATTTGCAGCTCGATGTCTG 60.223 50.000 0.00 5.44 0.00 3.51
3538 3675 2.012673 GGAATTTGCAGCTCGATGTCT 58.987 47.619 0.00 0.00 0.00 3.41
3539 3676 1.739466 TGGAATTTGCAGCTCGATGTC 59.261 47.619 0.00 0.00 0.00 3.06
3540 3677 1.825090 TGGAATTTGCAGCTCGATGT 58.175 45.000 0.00 0.00 0.00 3.06
3541 3678 3.608707 GCTATGGAATTTGCAGCTCGATG 60.609 47.826 0.00 0.00 0.00 3.84
3542 3679 2.551459 GCTATGGAATTTGCAGCTCGAT 59.449 45.455 0.00 0.00 0.00 3.59
3543 3680 1.942657 GCTATGGAATTTGCAGCTCGA 59.057 47.619 0.00 0.00 0.00 4.04
3544 3681 1.672363 TGCTATGGAATTTGCAGCTCG 59.328 47.619 0.00 0.00 32.40 5.03
3545 3682 3.351020 CTGCTATGGAATTTGCAGCTC 57.649 47.619 0.00 0.00 42.48 4.09
3558 3695 4.528674 AGCCACGAAGCTGCTATG 57.471 55.556 0.90 0.41 42.95 2.23
3566 3703 2.551270 GTGAACGCAGCCACGAAG 59.449 61.111 2.63 0.00 36.70 3.79
3573 3710 0.884704 TTCTCCTTGGTGAACGCAGC 60.885 55.000 0.58 0.00 42.72 5.25
3574 3711 1.466167 CATTCTCCTTGGTGAACGCAG 59.534 52.381 6.34 0.00 0.00 5.18
3578 3715 2.076863 CCGTCATTCTCCTTGGTGAAC 58.923 52.381 6.34 0.00 0.00 3.18
3579 3716 1.003118 CCCGTCATTCTCCTTGGTGAA 59.997 52.381 6.62 6.62 0.00 3.18
3584 3721 2.918712 ATAGCCCGTCATTCTCCTTG 57.081 50.000 0.00 0.00 0.00 3.61
3585 3722 5.568620 AAATATAGCCCGTCATTCTCCTT 57.431 39.130 0.00 0.00 0.00 3.36
3588 3725 6.455646 CGCAATAAATATAGCCCGTCATTCTC 60.456 42.308 0.00 0.00 0.00 2.87
3589 3726 5.351465 CGCAATAAATATAGCCCGTCATTCT 59.649 40.000 0.00 0.00 0.00 2.40
3590 3727 5.350365 TCGCAATAAATATAGCCCGTCATTC 59.650 40.000 0.00 0.00 0.00 2.67
3591 3728 5.242434 TCGCAATAAATATAGCCCGTCATT 58.758 37.500 0.00 0.00 0.00 2.57
3592 3729 4.827692 TCGCAATAAATATAGCCCGTCAT 58.172 39.130 0.00 0.00 0.00 3.06
3593 3730 4.260139 TCGCAATAAATATAGCCCGTCA 57.740 40.909 0.00 0.00 0.00 4.35
3594 3731 5.600908 TTTCGCAATAAATATAGCCCGTC 57.399 39.130 0.00 0.00 0.00 4.79
3595 3732 5.106317 CCATTTCGCAATAAATATAGCCCGT 60.106 40.000 0.00 0.00 0.00 5.28
3596 3733 5.331902 CCATTTCGCAATAAATATAGCCCG 58.668 41.667 0.00 0.00 0.00 6.13
3597 3734 5.102313 GCCATTTCGCAATAAATATAGCCC 58.898 41.667 0.00 0.00 0.00 5.19
3598 3735 5.801947 CAGCCATTTCGCAATAAATATAGCC 59.198 40.000 0.00 0.00 0.00 3.93
3599 3736 6.611381 TCAGCCATTTCGCAATAAATATAGC 58.389 36.000 0.00 0.00 0.00 2.97
3600 3737 7.810658 ACTCAGCCATTTCGCAATAAATATAG 58.189 34.615 0.00 0.00 0.00 1.31
3601 3738 7.744087 ACTCAGCCATTTCGCAATAAATATA 57.256 32.000 0.00 0.00 0.00 0.86
3602 3739 6.639632 ACTCAGCCATTTCGCAATAAATAT 57.360 33.333 0.00 0.00 0.00 1.28
3603 3740 7.744087 ATACTCAGCCATTTCGCAATAAATA 57.256 32.000 0.00 0.00 0.00 1.40
3604 3741 4.989279 ACTCAGCCATTTCGCAATAAAT 57.011 36.364 0.00 0.00 0.00 1.40
3605 3742 6.765989 AGTATACTCAGCCATTTCGCAATAAA 59.234 34.615 0.00 0.00 0.00 1.40
3606 3743 6.288294 AGTATACTCAGCCATTTCGCAATAA 58.712 36.000 0.00 0.00 0.00 1.40
3607 3744 5.853936 AGTATACTCAGCCATTTCGCAATA 58.146 37.500 0.00 0.00 0.00 1.90
3608 3745 4.708177 AGTATACTCAGCCATTTCGCAAT 58.292 39.130 0.00 0.00 0.00 3.56
3609 3746 4.137116 AGTATACTCAGCCATTTCGCAA 57.863 40.909 0.00 0.00 0.00 4.85
3610 3747 3.819564 AGTATACTCAGCCATTTCGCA 57.180 42.857 0.00 0.00 0.00 5.10
3611 3748 3.248602 CCAAGTATACTCAGCCATTTCGC 59.751 47.826 5.70 0.00 0.00 4.70
3612 3749 4.693283 TCCAAGTATACTCAGCCATTTCG 58.307 43.478 5.70 0.00 0.00 3.46
3613 3750 7.391148 TTTTCCAAGTATACTCAGCCATTTC 57.609 36.000 5.70 0.00 0.00 2.17
3614 3751 7.836183 AGATTTTCCAAGTATACTCAGCCATTT 59.164 33.333 5.70 0.00 0.00 2.32
3615 3752 7.284034 CAGATTTTCCAAGTATACTCAGCCATT 59.716 37.037 5.70 0.00 0.00 3.16
3616 3753 6.769822 CAGATTTTCCAAGTATACTCAGCCAT 59.230 38.462 5.70 0.00 0.00 4.40
3617 3754 6.115446 CAGATTTTCCAAGTATACTCAGCCA 58.885 40.000 5.70 0.00 0.00 4.75
3618 3755 5.529060 CCAGATTTTCCAAGTATACTCAGCC 59.471 44.000 5.70 0.00 0.00 4.85
3619 3756 6.037610 CACCAGATTTTCCAAGTATACTCAGC 59.962 42.308 5.70 0.00 0.00 4.26
3620 3757 7.106239 ACACCAGATTTTCCAAGTATACTCAG 58.894 38.462 5.70 2.13 0.00 3.35
3621 3758 7.016153 ACACCAGATTTTCCAAGTATACTCA 57.984 36.000 5.70 0.00 0.00 3.41
3643 3780 7.901029 TCAAAATCATTGGCCAACTAAATACA 58.099 30.769 23.27 0.00 0.00 2.29
3644 3781 8.034804 ACTCAAAATCATTGGCCAACTAAATAC 58.965 33.333 23.27 0.00 0.00 1.89
3645 3782 8.133024 ACTCAAAATCATTGGCCAACTAAATA 57.867 30.769 23.27 2.89 0.00 1.40
3652 3789 7.716799 AATACTACTCAAAATCATTGGCCAA 57.283 32.000 23.00 23.00 0.00 4.52
3670 3807 9.875691 GTGAAGCATACCATGATGATAATACTA 57.124 33.333 0.00 0.00 0.00 1.82
3686 3823 0.543749 AGGAGCAGGGTGAAGCATAC 59.456 55.000 0.00 0.00 0.00 2.39
3709 3846 7.776969 AGCATACAAGGAGATAATGTTCAATGT 59.223 33.333 0.00 0.00 0.00 2.71
3714 3851 9.494271 TCAATAGCATACAAGGAGATAATGTTC 57.506 33.333 0.00 0.00 0.00 3.18
3721 3858 8.099537 CAGGTTATCAATAGCATACAAGGAGAT 58.900 37.037 0.00 0.00 0.00 2.75
3722 3859 7.445121 CAGGTTATCAATAGCATACAAGGAGA 58.555 38.462 0.00 0.00 0.00 3.71
3724 3861 6.328934 TCCAGGTTATCAATAGCATACAAGGA 59.671 38.462 0.00 0.00 0.00 3.36
3725 3862 6.533730 TCCAGGTTATCAATAGCATACAAGG 58.466 40.000 0.00 0.00 0.00 3.61
3726 3863 7.172190 CACTCCAGGTTATCAATAGCATACAAG 59.828 40.741 0.00 0.00 0.00 3.16
3727 3864 6.992123 CACTCCAGGTTATCAATAGCATACAA 59.008 38.462 0.00 0.00 0.00 2.41
3729 3866 6.425114 CACACTCCAGGTTATCAATAGCATAC 59.575 42.308 0.00 0.00 0.00 2.39
3730 3867 6.464322 CCACACTCCAGGTTATCAATAGCATA 60.464 42.308 0.00 0.00 0.00 3.14
3731 3868 5.371526 CACACTCCAGGTTATCAATAGCAT 58.628 41.667 0.00 0.00 0.00 3.79
3732 3869 4.384098 CCACACTCCAGGTTATCAATAGCA 60.384 45.833 0.00 0.00 0.00 3.49
3733 3870 4.130118 CCACACTCCAGGTTATCAATAGC 58.870 47.826 0.00 0.00 0.00 2.97
3734 3871 5.129485 AGTCCACACTCCAGGTTATCAATAG 59.871 44.000 0.00 0.00 0.00 1.73
3735 3872 5.030147 AGTCCACACTCCAGGTTATCAATA 58.970 41.667 0.00 0.00 0.00 1.90
3736 3873 3.846588 AGTCCACACTCCAGGTTATCAAT 59.153 43.478 0.00 0.00 0.00 2.57
3754 3891 1.239347 GAACCACAGCAGGAAAGTCC 58.761 55.000 0.00 0.00 36.58 3.85
3761 3898 4.641541 TCAAATCATATGAACCACAGCAGG 59.358 41.667 9.99 0.00 0.00 4.85
3769 3906 6.129393 CGATTCACGTCAAATCATATGAACC 58.871 40.000 9.99 0.00 33.60 3.62
3770 3907 6.129393 CCGATTCACGTCAAATCATATGAAC 58.871 40.000 9.99 2.28 40.78 3.18
3795 3937 5.614231 CGTTTTCTCTGCTGTTCATCTGAAG 60.614 44.000 0.00 0.00 34.27 3.02
3835 3977 1.867233 CTAGCAAGCAAACACGACACT 59.133 47.619 0.00 0.00 0.00 3.55
3849 3991 3.084039 CCCAGAAAAGATGTGCTAGCAA 58.916 45.455 21.29 10.49 0.00 3.91
3878 4020 3.063997 GGTCAGACAAATCAATGCGTAGG 59.936 47.826 2.17 0.00 0.00 3.18
3882 4024 2.485426 ACTGGTCAGACAAATCAATGCG 59.515 45.455 2.17 0.00 0.00 4.73
3902 4044 1.205417 CATCCTCCAAACCATGCCAAC 59.795 52.381 0.00 0.00 0.00 3.77
3907 4049 8.924511 AGTATATTTACATCCTCCAAACCATG 57.075 34.615 0.00 0.00 0.00 3.66
3909 4051 8.994500 TGTAGTATATTTACATCCTCCAAACCA 58.006 33.333 0.00 0.00 0.00 3.67
3932 4081 3.511699 GTCACATGACGCATCTTCTGTA 58.488 45.455 0.00 0.00 35.12 2.74
3973 4142 2.145536 CAACAGCAAGCCCAAATTTCC 58.854 47.619 0.00 0.00 0.00 3.13
3977 4146 1.422531 TTCCAACAGCAAGCCCAAAT 58.577 45.000 0.00 0.00 0.00 2.32
3978 4147 1.070445 CATTCCAACAGCAAGCCCAAA 59.930 47.619 0.00 0.00 0.00 3.28
3979 4148 0.680618 CATTCCAACAGCAAGCCCAA 59.319 50.000 0.00 0.00 0.00 4.12
3980 4149 1.186917 CCATTCCAACAGCAAGCCCA 61.187 55.000 0.00 0.00 0.00 5.36
3981 4150 1.593265 CCATTCCAACAGCAAGCCC 59.407 57.895 0.00 0.00 0.00 5.19
3982 4151 1.187567 ACCCATTCCAACAGCAAGCC 61.188 55.000 0.00 0.00 0.00 4.35
3983 4152 1.544724 TACCCATTCCAACAGCAAGC 58.455 50.000 0.00 0.00 0.00 4.01
3984 4153 3.306019 GGTTTACCCATTCCAACAGCAAG 60.306 47.826 0.00 0.00 0.00 4.01
3985 4154 2.630580 GGTTTACCCATTCCAACAGCAA 59.369 45.455 0.00 0.00 0.00 3.91
4056 4232 2.113860 TGATTTTCCAAGAGCGGAGG 57.886 50.000 0.00 0.00 36.12 4.30
4061 4237 5.107143 GCGAGATCTATGATTTTCCAAGAGC 60.107 44.000 0.00 0.00 0.00 4.09
4062 4238 5.987953 TGCGAGATCTATGATTTTCCAAGAG 59.012 40.000 0.00 0.00 0.00 2.85
4063 4239 5.917462 TGCGAGATCTATGATTTTCCAAGA 58.083 37.500 0.00 0.00 0.00 3.02
4064 4240 6.259608 ACTTGCGAGATCTATGATTTTCCAAG 59.740 38.462 8.31 2.57 0.00 3.61
4065 4241 6.115446 ACTTGCGAGATCTATGATTTTCCAA 58.885 36.000 8.31 0.00 0.00 3.53
4066 4242 5.674525 ACTTGCGAGATCTATGATTTTCCA 58.325 37.500 8.31 0.00 0.00 3.53
4067 4243 5.755375 TGACTTGCGAGATCTATGATTTTCC 59.245 40.000 8.31 0.00 0.00 3.13
4068 4244 6.073873 CCTGACTTGCGAGATCTATGATTTTC 60.074 42.308 8.31 0.00 0.00 2.29
4069 4245 5.757320 CCTGACTTGCGAGATCTATGATTTT 59.243 40.000 8.31 0.00 0.00 1.82
4070 4246 5.163364 ACCTGACTTGCGAGATCTATGATTT 60.163 40.000 8.31 0.00 0.00 2.17
4071 4247 4.343526 ACCTGACTTGCGAGATCTATGATT 59.656 41.667 8.31 0.00 0.00 2.57
4072 4248 3.894427 ACCTGACTTGCGAGATCTATGAT 59.106 43.478 8.31 0.00 0.00 2.45
4073 4249 3.067320 CACCTGACTTGCGAGATCTATGA 59.933 47.826 8.31 0.00 0.00 2.15
4074 4250 3.181482 ACACCTGACTTGCGAGATCTATG 60.181 47.826 8.31 3.06 0.00 2.23
4075 4251 3.027412 ACACCTGACTTGCGAGATCTAT 58.973 45.455 8.31 0.00 0.00 1.98
4076 4252 2.164422 CACACCTGACTTGCGAGATCTA 59.836 50.000 8.31 0.00 0.00 1.98
4077 4253 1.067283 CACACCTGACTTGCGAGATCT 60.067 52.381 8.31 0.00 0.00 2.75
4078 4254 1.067565 TCACACCTGACTTGCGAGATC 60.068 52.381 8.31 2.34 0.00 2.75
4079 4255 0.969149 TCACACCTGACTTGCGAGAT 59.031 50.000 8.31 0.00 0.00 2.75
4080 4256 0.969149 ATCACACCTGACTTGCGAGA 59.031 50.000 8.31 0.00 0.00 4.04
4081 4257 1.337167 TGATCACACCTGACTTGCGAG 60.337 52.381 0.00 0.00 0.00 5.03
4082 4258 0.678950 TGATCACACCTGACTTGCGA 59.321 50.000 0.00 0.00 0.00 5.10
4083 4259 1.730501 ATGATCACACCTGACTTGCG 58.269 50.000 0.00 0.00 0.00 4.85
4084 4260 4.497006 GCATTATGATCACACCTGACTTGC 60.497 45.833 0.00 0.00 0.00 4.01
4085 4261 4.880120 AGCATTATGATCACACCTGACTTG 59.120 41.667 0.00 0.00 0.00 3.16
4086 4262 5.108187 AGCATTATGATCACACCTGACTT 57.892 39.130 0.00 0.00 0.00 3.01
4087 4263 4.767578 AGCATTATGATCACACCTGACT 57.232 40.909 0.00 0.00 0.00 3.41
4088 4264 5.121811 AGAAGCATTATGATCACACCTGAC 58.878 41.667 0.00 0.00 0.00 3.51
4089 4265 5.363562 AGAAGCATTATGATCACACCTGA 57.636 39.130 0.00 0.00 0.00 3.86
4090 4266 5.821470 AGAAGAAGCATTATGATCACACCTG 59.179 40.000 0.00 0.00 0.00 4.00
4113 4289 3.459232 TGAGCAGATTACGGAATGGAG 57.541 47.619 0.00 0.00 0.00 3.86
4120 4296 5.352284 AGTCAGTTAATGAGCAGATTACGG 58.648 41.667 0.00 0.00 39.07 4.02
4121 4297 6.893958 AAGTCAGTTAATGAGCAGATTACG 57.106 37.500 0.00 0.00 39.07 3.18
4143 4319 4.223556 TCGGTAAGCCAAATGTGGATAA 57.776 40.909 5.94 0.00 45.00 1.75
4168 4344 3.118542 GTCAAAACGAAGTACGGACAGT 58.881 45.455 0.00 0.00 45.00 3.55
4171 4347 4.783959 AAAGTCAAAACGAAGTACGGAC 57.216 40.909 0.00 0.00 45.00 4.79
4177 4353 4.412207 GCACTCAAAAGTCAAAACGAAGT 58.588 39.130 0.00 0.00 35.99 3.01
4178 4354 3.478516 CGCACTCAAAAGTCAAAACGAAG 59.521 43.478 0.00 0.00 31.71 3.79
4197 4373 1.139256 TCACCAACCTAACAGTTCGCA 59.861 47.619 0.00 0.00 0.00 5.10
4199 4375 2.224209 ACCTCACCAACCTAACAGTTCG 60.224 50.000 0.00 0.00 0.00 3.95
4207 4383 1.282382 GGGCTAACCTCACCAACCTA 58.718 55.000 0.00 0.00 35.85 3.08
4208 4384 0.770557 TGGGCTAACCTCACCAACCT 60.771 55.000 0.00 0.00 41.11 3.50
4221 4397 1.557832 AGTTTGGAAGCGTATGGGCTA 59.442 47.619 0.00 0.00 43.93 3.93
4223 4399 1.669265 GTAGTTTGGAAGCGTATGGGC 59.331 52.381 0.00 0.00 0.00 5.36
4224 4400 2.285977 GGTAGTTTGGAAGCGTATGGG 58.714 52.381 0.00 0.00 0.00 4.00
4225 4401 2.936498 CTGGTAGTTTGGAAGCGTATGG 59.064 50.000 0.00 0.00 0.00 2.74
4227 4403 2.570302 ACCTGGTAGTTTGGAAGCGTAT 59.430 45.455 0.00 0.00 0.00 3.06
4231 4412 2.152016 GACACCTGGTAGTTTGGAAGC 58.848 52.381 0.00 0.00 0.00 3.86
4244 4425 3.713858 TCAGCAAAATTGTGACACCTG 57.286 42.857 0.00 1.46 0.00 4.00
4276 4565 5.446709 GCAATAAGAATCATGTCACATCCG 58.553 41.667 0.00 0.00 0.00 4.18
4279 4568 4.336153 TGCGCAATAAGAATCATGTCACAT 59.664 37.500 8.16 0.00 0.00 3.21
4319 4608 4.642429 GAAACCAGAAGTAGAGGCAAGAA 58.358 43.478 0.00 0.00 0.00 2.52
4325 4614 2.028930 ACAGCGAAACCAGAAGTAGAGG 60.029 50.000 0.00 0.00 0.00 3.69
4329 4618 4.636648 TGAAAAACAGCGAAACCAGAAGTA 59.363 37.500 0.00 0.00 0.00 2.24
4330 4619 3.442273 TGAAAAACAGCGAAACCAGAAGT 59.558 39.130 0.00 0.00 0.00 3.01
4332 4621 3.692101 TCTGAAAAACAGCGAAACCAGAA 59.308 39.130 0.00 0.00 45.38 3.02


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.