Multiple sequence alignment - TraesCS4B01G038400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G038400 chr4B 100.000 2954 0 0 1 2954 27783589 27786542 0.000000e+00 5456
1 TraesCS4B01G038400 chr4B 93.398 1848 76 23 326 2164 640986500 640988310 0.000000e+00 2695
2 TraesCS4B01G038400 chr4B 96.556 1539 46 5 679 2215 666736050 666734517 0.000000e+00 2542
3 TraesCS4B01G038400 chr4B 95.941 1552 51 5 666 2215 471951587 471953128 0.000000e+00 2507
4 TraesCS4B01G038400 chr4B 95.455 1562 59 7 666 2219 507255151 507256708 0.000000e+00 2481
5 TraesCS4B01G038400 chr7B 94.192 1894 59 22 326 2216 608307460 608305615 0.000000e+00 2841
6 TraesCS4B01G038400 chr7B 92.884 1897 75 30 323 2215 704472139 704470299 0.000000e+00 2700
7 TraesCS4B01G038400 chr7B 95.825 1557 50 9 666 2213 79315058 79313508 0.000000e+00 2501
8 TraesCS4B01G038400 chr7B 92.361 720 25 18 326 1043 125068077 125067386 0.000000e+00 998
9 TraesCS4B01G038400 chr7B 89.205 352 33 3 2366 2713 613232688 613232338 4.520000e-118 435
10 TraesCS4B01G038400 chr2B 93.460 1896 76 23 323 2215 762461583 762459733 0.000000e+00 2771
11 TraesCS4B01G038400 chr2B 95.694 1556 59 5 666 2213 30630927 30632482 0.000000e+00 2495
12 TraesCS4B01G038400 chr2B 95.507 1558 54 8 669 2217 776691337 776689787 0.000000e+00 2475
13 TraesCS4B01G038400 chr2B 89.146 1898 82 52 323 2213 788168081 788169861 0.000000e+00 2250
14 TraesCS4B01G038400 chr2B 97.681 345 6 2 323 666 775593379 775593722 2.540000e-165 592
15 TraesCS4B01G038400 chr2B 84.358 358 51 3 2360 2713 141694181 141693825 2.180000e-91 346
16 TraesCS4B01G038400 chr4A 96.129 1550 57 3 666 2213 707939857 707938309 0.000000e+00 2527
17 TraesCS4B01G038400 chr4A 97.953 342 6 1 326 666 665953760 665954101 2.540000e-165 592
18 TraesCS4B01G038400 chr4A 91.793 329 16 4 1 318 584513198 584513526 5.810000e-122 448
19 TraesCS4B01G038400 chr4A 93.827 243 14 1 2711 2953 584513687 584513928 6.020000e-97 364
20 TraesCS4B01G038400 chr4A 90.566 159 13 2 2212 2368 584513535 584513693 2.980000e-50 209
21 TraesCS4B01G038400 chr6B 95.951 1556 56 6 666 2217 64203049 64204601 0.000000e+00 2518
22 TraesCS4B01G038400 chr3B 95.321 1560 61 7 666 2216 817190632 817192188 0.000000e+00 2466
23 TraesCS4B01G038400 chr3B 90.960 354 27 2 2365 2714 662817008 662816656 3.450000e-129 472
24 TraesCS4B01G038400 chr1B 96.542 347 11 1 320 666 84358937 84359282 9.180000e-160 573
25 TraesCS4B01G038400 chr5D 89.296 355 31 3 2365 2713 2644394 2644747 3.500000e-119 438
26 TraesCS4B01G038400 chr1A 87.413 286 28 6 2422 2702 258875574 258875292 3.670000e-84 322
27 TraesCS4B01G038400 chr1A 95.161 62 3 0 2365 2426 258880178 258880117 6.740000e-17 99
28 TraesCS4B01G038400 chr2D 82.805 221 27 8 2365 2583 470137148 470136937 1.400000e-43 187
29 TraesCS4B01G038400 chr4D 90.000 100 8 2 2263 2361 15957801 15957899 8.590000e-26 128


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G038400 chr4B 27783589 27786542 2953 False 5456.000000 5456 100.000 1 2954 1 chr4B.!!$F1 2953
1 TraesCS4B01G038400 chr4B 640986500 640988310 1810 False 2695.000000 2695 93.398 326 2164 1 chr4B.!!$F4 1838
2 TraesCS4B01G038400 chr4B 666734517 666736050 1533 True 2542.000000 2542 96.556 679 2215 1 chr4B.!!$R1 1536
3 TraesCS4B01G038400 chr4B 471951587 471953128 1541 False 2507.000000 2507 95.941 666 2215 1 chr4B.!!$F2 1549
4 TraesCS4B01G038400 chr4B 507255151 507256708 1557 False 2481.000000 2481 95.455 666 2219 1 chr4B.!!$F3 1553
5 TraesCS4B01G038400 chr7B 608305615 608307460 1845 True 2841.000000 2841 94.192 326 2216 1 chr7B.!!$R3 1890
6 TraesCS4B01G038400 chr7B 704470299 704472139 1840 True 2700.000000 2700 92.884 323 2215 1 chr7B.!!$R5 1892
7 TraesCS4B01G038400 chr7B 79313508 79315058 1550 True 2501.000000 2501 95.825 666 2213 1 chr7B.!!$R1 1547
8 TraesCS4B01G038400 chr7B 125067386 125068077 691 True 998.000000 998 92.361 326 1043 1 chr7B.!!$R2 717
9 TraesCS4B01G038400 chr2B 762459733 762461583 1850 True 2771.000000 2771 93.460 323 2215 1 chr2B.!!$R2 1892
10 TraesCS4B01G038400 chr2B 30630927 30632482 1555 False 2495.000000 2495 95.694 666 2213 1 chr2B.!!$F1 1547
11 TraesCS4B01G038400 chr2B 776689787 776691337 1550 True 2475.000000 2475 95.507 669 2217 1 chr2B.!!$R3 1548
12 TraesCS4B01G038400 chr2B 788168081 788169861 1780 False 2250.000000 2250 89.146 323 2213 1 chr2B.!!$F3 1890
13 TraesCS4B01G038400 chr4A 707938309 707939857 1548 True 2527.000000 2527 96.129 666 2213 1 chr4A.!!$R1 1547
14 TraesCS4B01G038400 chr4A 584513198 584513928 730 False 340.333333 448 92.062 1 2953 3 chr4A.!!$F2 2952
15 TraesCS4B01G038400 chr6B 64203049 64204601 1552 False 2518.000000 2518 95.951 666 2217 1 chr6B.!!$F1 1551
16 TraesCS4B01G038400 chr3B 817190632 817192188 1556 False 2466.000000 2466 95.321 666 2216 1 chr3B.!!$F1 1550

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
284 296 0.036306 AACTGGGGTTAAGAGCCACG 59.964 55.0 0.00 0.0 45.46 4.94 F
295 307 0.171455 AGAGCCACGAAGTCGATGAC 59.829 55.0 7.87 0.0 41.61 3.06 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1306 1350 0.537188 CCCTTGAGGTACGTGAGCAT 59.463 55.0 0.0 0.0 0.0 3.79 R
2269 2363 0.897863 TCTTTGGCATTGGAACCCGG 60.898 55.0 0.0 0.0 0.0 5.73 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
59 71 1.212935 GTGGCAGATGGGGTCAAGTAT 59.787 52.381 0.00 0.00 0.00 2.12
73 85 1.135803 CAAGTATTCAACCCCGTTGCG 60.136 52.381 0.00 0.00 42.55 4.85
78 90 3.905678 CAACCCCGTTGCGCCAAA 61.906 61.111 4.18 0.00 36.73 3.28
87 99 2.622011 TTGCGCCAAACGGTCCATC 61.622 57.895 4.18 0.00 43.93 3.51
115 127 2.551270 TCTTACCATGGAGGACAAGCT 58.449 47.619 21.47 0.00 41.22 3.74
116 128 3.719871 TCTTACCATGGAGGACAAGCTA 58.280 45.455 21.47 0.00 41.22 3.32
127 139 5.721960 TGGAGGACAAGCTAATAGAAGAGTT 59.278 40.000 0.00 0.00 0.00 3.01
137 149 8.649973 AGCTAATAGAAGAGTTTACATTTCCG 57.350 34.615 0.00 0.00 0.00 4.30
166 178 1.561542 GGGCTCTCCAAATCTTCTCCA 59.438 52.381 0.00 0.00 35.00 3.86
171 183 4.757594 CTCTCCAAATCTTCTCCACTGAG 58.242 47.826 0.00 0.00 40.17 3.35
172 184 4.420206 TCTCCAAATCTTCTCCACTGAGA 58.580 43.478 0.00 0.00 45.90 3.27
183 195 5.047566 TCTCCACTGAGAATTTTTGGTGA 57.952 39.130 0.00 0.00 44.62 4.02
184 196 4.821805 TCTCCACTGAGAATTTTTGGTGAC 59.178 41.667 0.00 0.00 44.62 3.67
185 197 4.531854 TCCACTGAGAATTTTTGGTGACA 58.468 39.130 0.00 0.00 39.83 3.58
186 198 4.338118 TCCACTGAGAATTTTTGGTGACAC 59.662 41.667 0.00 0.00 42.67 3.67
187 199 4.499696 CCACTGAGAATTTTTGGTGACACC 60.500 45.833 18.28 18.28 42.67 4.16
188 200 3.315191 ACTGAGAATTTTTGGTGACACCG 59.685 43.478 19.67 3.39 42.58 4.94
189 201 3.546724 TGAGAATTTTTGGTGACACCGA 58.453 40.909 19.67 15.49 42.58 4.69
190 202 4.141287 TGAGAATTTTTGGTGACACCGAT 58.859 39.130 19.67 8.23 42.58 4.18
191 203 4.023279 TGAGAATTTTTGGTGACACCGATG 60.023 41.667 19.67 0.00 42.58 3.84
192 204 4.141287 AGAATTTTTGGTGACACCGATGA 58.859 39.130 19.67 9.73 42.58 2.92
193 205 4.582656 AGAATTTTTGGTGACACCGATGAA 59.417 37.500 19.67 14.98 42.58 2.57
194 206 5.243730 AGAATTTTTGGTGACACCGATGAAT 59.756 36.000 19.67 16.37 42.58 2.57
195 207 4.927978 TTTTTGGTGACACCGATGAATT 57.072 36.364 19.67 0.00 42.58 2.17
196 208 3.913548 TTTGGTGACACCGATGAATTG 57.086 42.857 19.67 0.00 42.58 2.32
197 209 2.559698 TGGTGACACCGATGAATTGT 57.440 45.000 19.67 0.00 42.58 2.71
198 210 2.150390 TGGTGACACCGATGAATTGTG 58.850 47.619 19.67 0.00 42.58 3.33
199 211 1.135689 GGTGACACCGATGAATTGTGC 60.136 52.381 9.33 0.00 33.30 4.57
200 212 1.135689 GTGACACCGATGAATTGTGCC 60.136 52.381 0.00 0.00 33.30 5.01
201 213 1.164411 GACACCGATGAATTGTGCCA 58.836 50.000 0.00 0.00 33.30 4.92
202 214 1.539388 GACACCGATGAATTGTGCCAA 59.461 47.619 0.00 0.00 33.30 4.52
203 215 1.541147 ACACCGATGAATTGTGCCAAG 59.459 47.619 0.00 0.00 33.30 3.61
204 216 1.541147 CACCGATGAATTGTGCCAAGT 59.459 47.619 0.00 0.00 0.00 3.16
205 217 2.746904 CACCGATGAATTGTGCCAAGTA 59.253 45.455 0.00 0.00 0.00 2.24
206 218 3.009723 ACCGATGAATTGTGCCAAGTAG 58.990 45.455 0.00 0.00 0.00 2.57
207 219 2.355756 CCGATGAATTGTGCCAAGTAGG 59.644 50.000 0.00 0.00 41.84 3.18
218 230 2.021355 CCAAGTAGGCAGAGCAAGAG 57.979 55.000 0.00 0.00 0.00 2.85
219 231 1.406614 CCAAGTAGGCAGAGCAAGAGG 60.407 57.143 0.00 0.00 0.00 3.69
220 232 1.552337 CAAGTAGGCAGAGCAAGAGGA 59.448 52.381 0.00 0.00 0.00 3.71
221 233 1.484038 AGTAGGCAGAGCAAGAGGAG 58.516 55.000 0.00 0.00 0.00 3.69
222 234 1.190643 GTAGGCAGAGCAAGAGGAGT 58.809 55.000 0.00 0.00 0.00 3.85
223 235 2.024846 AGTAGGCAGAGCAAGAGGAGTA 60.025 50.000 0.00 0.00 0.00 2.59
224 236 2.173126 AGGCAGAGCAAGAGGAGTAT 57.827 50.000 0.00 0.00 0.00 2.12
225 237 2.476199 AGGCAGAGCAAGAGGAGTATT 58.524 47.619 0.00 0.00 0.00 1.89
226 238 2.170187 AGGCAGAGCAAGAGGAGTATTG 59.830 50.000 0.00 0.00 0.00 1.90
227 239 2.093235 GGCAGAGCAAGAGGAGTATTGT 60.093 50.000 0.00 0.00 0.00 2.71
228 240 3.194062 GCAGAGCAAGAGGAGTATTGTC 58.806 50.000 0.00 0.00 0.00 3.18
229 241 3.791245 CAGAGCAAGAGGAGTATTGTCC 58.209 50.000 0.00 0.00 36.79 4.02
230 242 2.428890 AGAGCAAGAGGAGTATTGTCCG 59.571 50.000 0.00 0.00 42.05 4.79
231 243 1.134670 AGCAAGAGGAGTATTGTCCGC 60.135 52.381 0.00 0.00 42.05 5.54
232 244 1.405526 GCAAGAGGAGTATTGTCCGCA 60.406 52.381 0.00 0.00 42.05 5.69
233 245 2.935238 GCAAGAGGAGTATTGTCCGCAA 60.935 50.000 0.00 0.00 42.05 4.85
234 246 3.334691 CAAGAGGAGTATTGTCCGCAAA 58.665 45.455 0.00 0.00 42.05 3.68
235 247 3.695830 AGAGGAGTATTGTCCGCAAAA 57.304 42.857 0.00 0.00 42.05 2.44
236 248 3.600388 AGAGGAGTATTGTCCGCAAAAG 58.400 45.455 0.00 0.00 42.05 2.27
237 249 3.008049 AGAGGAGTATTGTCCGCAAAAGT 59.992 43.478 0.00 0.00 42.05 2.66
238 250 3.751518 AGGAGTATTGTCCGCAAAAGTT 58.248 40.909 0.00 0.00 42.05 2.66
239 251 3.751698 AGGAGTATTGTCCGCAAAAGTTC 59.248 43.478 0.00 0.00 42.05 3.01
240 252 3.119955 GGAGTATTGTCCGCAAAAGTTCC 60.120 47.826 0.00 0.00 38.21 3.62
241 253 3.482436 AGTATTGTCCGCAAAAGTTCCA 58.518 40.909 0.00 0.00 38.21 3.53
242 254 3.886505 AGTATTGTCCGCAAAAGTTCCAA 59.113 39.130 0.00 0.00 38.21 3.53
243 255 3.810310 ATTGTCCGCAAAAGTTCCAAA 57.190 38.095 0.00 0.00 38.21 3.28
244 256 3.810310 TTGTCCGCAAAAGTTCCAAAT 57.190 38.095 0.00 0.00 0.00 2.32
245 257 3.363341 TGTCCGCAAAAGTTCCAAATC 57.637 42.857 0.00 0.00 0.00 2.17
246 258 2.035321 TGTCCGCAAAAGTTCCAAATCC 59.965 45.455 0.00 0.00 0.00 3.01
247 259 2.035321 GTCCGCAAAAGTTCCAAATCCA 59.965 45.455 0.00 0.00 0.00 3.41
248 260 2.295909 TCCGCAAAAGTTCCAAATCCAG 59.704 45.455 0.00 0.00 0.00 3.86
249 261 2.610232 CCGCAAAAGTTCCAAATCCAGG 60.610 50.000 0.00 0.00 0.00 4.45
250 262 2.035832 CGCAAAAGTTCCAAATCCAGGT 59.964 45.455 0.00 0.00 0.00 4.00
251 263 3.392882 GCAAAAGTTCCAAATCCAGGTG 58.607 45.455 0.00 0.00 0.00 4.00
252 264 3.069443 GCAAAAGTTCCAAATCCAGGTGA 59.931 43.478 0.00 0.00 0.00 4.02
253 265 4.262592 GCAAAAGTTCCAAATCCAGGTGAT 60.263 41.667 0.00 0.00 34.22 3.06
254 266 5.232463 CAAAAGTTCCAAATCCAGGTGATG 58.768 41.667 0.00 0.00 32.68 3.07
262 274 4.301505 CCAGGTGATGGTGTTCCG 57.698 61.111 0.00 0.00 44.91 4.30
263 275 2.040544 CCAGGTGATGGTGTTCCGC 61.041 63.158 0.00 0.00 44.91 5.54
264 276 2.040544 CAGGTGATGGTGTTCCGCC 61.041 63.158 0.00 0.00 36.30 6.13
270 282 2.203280 TGGTGTTCCGCCAACTGG 60.203 61.111 0.00 0.00 41.39 4.00
271 283 2.983592 GGTGTTCCGCCAACTGGG 60.984 66.667 0.00 0.00 35.79 4.45
273 285 3.494254 TGTTCCGCCAACTGGGGT 61.494 61.111 11.46 0.00 46.91 4.95
274 286 2.203437 GTTCCGCCAACTGGGGTT 60.203 61.111 11.46 0.00 46.91 4.11
275 287 1.073548 GTTCCGCCAACTGGGGTTA 59.926 57.895 11.46 0.00 46.91 2.85
276 288 0.537828 GTTCCGCCAACTGGGGTTAA 60.538 55.000 11.46 3.49 46.91 2.01
277 289 0.250989 TTCCGCCAACTGGGGTTAAG 60.251 55.000 11.46 0.00 46.91 1.85
278 290 1.128809 TCCGCCAACTGGGGTTAAGA 61.129 55.000 11.46 0.00 46.91 2.10
279 291 0.676782 CCGCCAACTGGGGTTAAGAG 60.677 60.000 11.46 0.00 45.67 2.85
280 292 1.305930 CGCCAACTGGGGTTAAGAGC 61.306 60.000 4.67 0.00 42.54 4.09
281 293 0.965866 GCCAACTGGGGTTAAGAGCC 60.966 60.000 0.00 0.00 42.86 4.70
282 294 0.404040 CCAACTGGGGTTAAGAGCCA 59.596 55.000 0.00 0.00 45.46 4.75
283 295 1.534729 CAACTGGGGTTAAGAGCCAC 58.465 55.000 0.00 0.00 45.46 5.01
284 296 0.036306 AACTGGGGTTAAGAGCCACG 59.964 55.000 0.00 0.00 45.46 4.94
285 297 0.834687 ACTGGGGTTAAGAGCCACGA 60.835 55.000 0.00 0.00 45.46 4.35
286 298 0.323629 CTGGGGTTAAGAGCCACGAA 59.676 55.000 0.00 0.00 45.46 3.85
287 299 0.323629 TGGGGTTAAGAGCCACGAAG 59.676 55.000 0.00 0.00 45.46 3.79
288 300 0.323957 GGGGTTAAGAGCCACGAAGT 59.676 55.000 0.00 0.00 45.46 3.01
289 301 1.675116 GGGGTTAAGAGCCACGAAGTC 60.675 57.143 0.00 0.00 45.46 3.01
290 302 1.347320 GGTTAAGAGCCACGAAGTCG 58.653 55.000 0.00 0.00 41.61 4.18
291 303 1.068055 GGTTAAGAGCCACGAAGTCGA 60.068 52.381 7.87 0.00 41.61 4.20
292 304 2.416972 GGTTAAGAGCCACGAAGTCGAT 60.417 50.000 7.87 0.00 41.61 3.59
293 305 2.561733 TAAGAGCCACGAAGTCGATG 57.438 50.000 7.87 2.39 41.61 3.84
294 306 0.888619 AAGAGCCACGAAGTCGATGA 59.111 50.000 7.87 0.00 41.61 2.92
295 307 0.171455 AGAGCCACGAAGTCGATGAC 59.829 55.000 7.87 0.00 41.61 3.06
296 308 1.134530 GAGCCACGAAGTCGATGACG 61.135 60.000 7.87 0.00 41.61 4.35
297 309 2.158959 GCCACGAAGTCGATGACGG 61.159 63.158 7.87 1.31 41.61 4.79
298 310 1.211969 CCACGAAGTCGATGACGGT 59.788 57.895 7.87 0.00 41.61 4.83
299 311 1.071019 CCACGAAGTCGATGACGGTG 61.071 60.000 7.87 10.02 41.61 4.94
300 312 1.071019 CACGAAGTCGATGACGGTGG 61.071 60.000 7.87 0.02 41.61 4.61
301 313 2.158959 CGAAGTCGATGACGGTGGC 61.159 63.158 0.00 0.00 43.02 5.01
302 314 1.810030 GAAGTCGATGACGGTGGCC 60.810 63.158 0.00 0.00 37.67 5.36
303 315 2.501223 GAAGTCGATGACGGTGGCCA 62.501 60.000 0.00 0.00 37.67 5.36
304 316 2.047655 GTCGATGACGGTGGCCAA 60.048 61.111 7.24 0.00 40.21 4.52
305 317 2.100631 GTCGATGACGGTGGCCAAG 61.101 63.158 7.24 7.62 40.21 3.61
306 318 2.264480 CGATGACGGTGGCCAAGA 59.736 61.111 7.24 0.00 35.72 3.02
307 319 2.100631 CGATGACGGTGGCCAAGAC 61.101 63.158 7.24 5.95 35.72 3.01
308 320 1.003839 GATGACGGTGGCCAAGACA 60.004 57.895 7.24 12.23 0.00 3.41
309 321 0.605319 GATGACGGTGGCCAAGACAA 60.605 55.000 7.24 0.00 0.00 3.18
310 322 0.889186 ATGACGGTGGCCAAGACAAC 60.889 55.000 7.24 0.00 0.00 3.32
313 325 4.150994 GGTGGCCAAGACAACGAA 57.849 55.556 7.24 0.00 0.00 3.85
314 326 1.652563 GGTGGCCAAGACAACGAAC 59.347 57.895 7.24 0.00 0.00 3.95
315 327 0.818040 GGTGGCCAAGACAACGAACT 60.818 55.000 7.24 0.00 0.00 3.01
316 328 0.586802 GTGGCCAAGACAACGAACTC 59.413 55.000 7.24 0.00 0.00 3.01
317 329 0.534203 TGGCCAAGACAACGAACTCC 60.534 55.000 0.61 0.00 0.00 3.85
318 330 0.534203 GGCCAAGACAACGAACTCCA 60.534 55.000 0.00 0.00 0.00 3.86
319 331 0.868406 GCCAAGACAACGAACTCCAG 59.132 55.000 0.00 0.00 0.00 3.86
320 332 1.540363 GCCAAGACAACGAACTCCAGA 60.540 52.381 0.00 0.00 0.00 3.86
321 333 2.833794 CCAAGACAACGAACTCCAGAA 58.166 47.619 0.00 0.00 0.00 3.02
637 651 1.407979 CAGCCTTGCCATTGATTCCTC 59.592 52.381 0.00 0.00 0.00 3.71
638 652 1.006281 AGCCTTGCCATTGATTCCTCA 59.994 47.619 0.00 0.00 0.00 3.86
639 653 1.135721 GCCTTGCCATTGATTCCTCAC 59.864 52.381 0.00 0.00 0.00 3.51
640 654 1.402968 CCTTGCCATTGATTCCTCACG 59.597 52.381 0.00 0.00 0.00 4.35
641 655 1.402968 CTTGCCATTGATTCCTCACGG 59.597 52.381 0.00 0.00 0.00 4.94
642 656 0.394216 TGCCATTGATTCCTCACGGG 60.394 55.000 0.00 0.00 0.00 5.28
643 657 1.728490 GCCATTGATTCCTCACGGGC 61.728 60.000 0.00 0.00 41.19 6.13
644 658 1.439353 CCATTGATTCCTCACGGGCG 61.439 60.000 0.00 0.00 34.39 6.13
645 659 1.153168 ATTGATTCCTCACGGGCGG 60.153 57.895 0.00 0.00 34.39 6.13
646 660 3.969250 TTGATTCCTCACGGGCGGC 62.969 63.158 0.00 0.00 34.39 6.53
782 810 2.839098 CCTGTGCCCAGACCAGTT 59.161 61.111 0.00 0.00 41.50 3.16
824 855 1.938596 TCCCTCTCCCTGCCTCTCT 60.939 63.158 0.00 0.00 0.00 3.10
1264 1308 4.021925 GGCAGAACAGCGAGGGGT 62.022 66.667 0.00 0.00 34.64 4.95
1623 1667 4.680237 CTGGCGCCGGTGAAGACA 62.680 66.667 27.83 10.40 0.00 3.41
2060 2131 6.870971 ACTAGTTTTTATCAAACTTCGCCA 57.129 33.333 5.34 0.00 40.58 5.69
2248 2342 3.440522 TCTTGTCACCGAGTGAGTCTATG 59.559 47.826 6.94 0.00 43.57 2.23
2255 2349 2.543641 CGAGTGAGTCTATGCAATGCA 58.456 47.619 11.44 11.44 44.86 3.96
2276 2370 4.618227 GCATTGCCATATATTTCCGGGTTC 60.618 45.833 0.00 0.00 0.00 3.62
2292 2386 2.238521 GGTTCCAATGCCAAAGAGTCA 58.761 47.619 0.00 0.00 0.00 3.41
2293 2387 2.229784 GGTTCCAATGCCAAAGAGTCAG 59.770 50.000 0.00 0.00 0.00 3.51
2304 2398 3.393800 CAAAGAGTCAGGTGTAGTGGTG 58.606 50.000 0.00 0.00 0.00 4.17
2306 2400 0.037232 GAGTCAGGTGTAGTGGTGGC 60.037 60.000 0.00 0.00 0.00 5.01
2358 2452 4.261783 GCCAGAAGATGCCTTTTTATAGCC 60.262 45.833 0.00 0.00 31.62 3.93
2363 2457 8.940952 CAGAAGATGCCTTTTTATAGCCTATAC 58.059 37.037 0.00 0.00 31.62 1.47
2378 2472 4.265904 CCTATACGGGCATGTACAATGA 57.734 45.455 0.00 0.00 0.00 2.57
2379 2473 4.832248 CCTATACGGGCATGTACAATGAT 58.168 43.478 0.00 0.00 0.00 2.45
2380 2474 4.631377 CCTATACGGGCATGTACAATGATG 59.369 45.833 0.00 0.00 0.00 3.07
2381 2475 1.679139 ACGGGCATGTACAATGATGG 58.321 50.000 0.00 0.00 0.00 3.51
2382 2476 0.311790 CGGGCATGTACAATGATGGC 59.688 55.000 11.25 11.25 42.82 4.40
2383 2477 1.401761 GGGCATGTACAATGATGGCA 58.598 50.000 18.87 0.00 44.77 4.92
2384 2478 1.965643 GGGCATGTACAATGATGGCAT 59.034 47.619 18.87 0.00 44.77 4.40
2385 2479 2.029649 GGGCATGTACAATGATGGCATC 60.030 50.000 20.52 20.52 44.77 3.91
2386 2480 2.624364 GGCATGTACAATGATGGCATCA 59.376 45.455 30.53 30.53 43.00 3.07
2387 2481 3.551454 GGCATGTACAATGATGGCATCAC 60.551 47.826 30.96 18.47 43.01 3.06
2388 2482 3.551454 GCATGTACAATGATGGCATCACC 60.551 47.826 30.96 16.59 43.01 4.02
2399 2493 3.203442 CATCACCATGGTGCTGCC 58.797 61.111 35.73 0.00 45.04 4.85
2400 2494 2.043652 ATCACCATGGTGCTGCCC 60.044 61.111 35.73 0.00 45.04 5.36
2401 2495 3.667217 ATCACCATGGTGCTGCCCC 62.667 63.158 35.73 0.00 45.04 5.80
2402 2496 4.682334 CACCATGGTGCTGCCCCA 62.682 66.667 31.13 6.25 39.39 4.96
2403 2497 3.675790 ACCATGGTGCTGCCCCAT 61.676 61.111 18.99 11.05 43.53 4.00
2414 2508 4.917474 GCCCCATGCATTTCACAC 57.083 55.556 0.00 0.00 40.77 3.82
2415 2509 1.973760 GCCCCATGCATTTCACACA 59.026 52.632 0.00 0.00 40.77 3.72
2416 2510 0.321021 GCCCCATGCATTTCACACAA 59.679 50.000 0.00 0.00 40.77 3.33
2417 2511 1.065998 GCCCCATGCATTTCACACAAT 60.066 47.619 0.00 0.00 40.77 2.71
2418 2512 2.168106 GCCCCATGCATTTCACACAATA 59.832 45.455 0.00 0.00 40.77 1.90
2419 2513 3.181463 GCCCCATGCATTTCACACAATAT 60.181 43.478 0.00 0.00 40.77 1.28
2420 2514 4.683942 GCCCCATGCATTTCACACAATATT 60.684 41.667 0.00 0.00 40.77 1.28
2421 2515 5.430007 CCCCATGCATTTCACACAATATTT 58.570 37.500 0.00 0.00 0.00 1.40
2422 2516 5.881443 CCCCATGCATTTCACACAATATTTT 59.119 36.000 0.00 0.00 0.00 1.82
2423 2517 6.374894 CCCCATGCATTTCACACAATATTTTT 59.625 34.615 0.00 0.00 0.00 1.94
2424 2518 7.551974 CCCCATGCATTTCACACAATATTTTTA 59.448 33.333 0.00 0.00 0.00 1.52
2425 2519 9.111613 CCCATGCATTTCACACAATATTTTTAT 57.888 29.630 0.00 0.00 0.00 1.40
2442 2536 7.681939 ATTTTTATTTGAAGCTACTGTCCGA 57.318 32.000 0.00 0.00 0.00 4.55
2443 2537 7.499321 TTTTTATTTGAAGCTACTGTCCGAA 57.501 32.000 0.00 0.00 0.00 4.30
2444 2538 6.476243 TTTATTTGAAGCTACTGTCCGAAC 57.524 37.500 0.00 0.00 0.00 3.95
2445 2539 2.450609 TTGAAGCTACTGTCCGAACC 57.549 50.000 0.00 0.00 0.00 3.62
2446 2540 1.334160 TGAAGCTACTGTCCGAACCA 58.666 50.000 0.00 0.00 0.00 3.67
2447 2541 1.689813 TGAAGCTACTGTCCGAACCAA 59.310 47.619 0.00 0.00 0.00 3.67
2448 2542 2.067013 GAAGCTACTGTCCGAACCAAC 58.933 52.381 0.00 0.00 0.00 3.77
2449 2543 1.045407 AGCTACTGTCCGAACCAACA 58.955 50.000 0.00 0.00 0.00 3.33
2450 2544 1.414919 AGCTACTGTCCGAACCAACAA 59.585 47.619 0.00 0.00 0.00 2.83
2451 2545 2.038557 AGCTACTGTCCGAACCAACAAT 59.961 45.455 0.00 0.00 0.00 2.71
2452 2546 2.415512 GCTACTGTCCGAACCAACAATC 59.584 50.000 0.00 0.00 0.00 2.67
2453 2547 1.892209 ACTGTCCGAACCAACAATCC 58.108 50.000 0.00 0.00 0.00 3.01
2454 2548 1.165270 CTGTCCGAACCAACAATCCC 58.835 55.000 0.00 0.00 0.00 3.85
2455 2549 0.768622 TGTCCGAACCAACAATCCCT 59.231 50.000 0.00 0.00 0.00 4.20
2456 2550 1.271163 TGTCCGAACCAACAATCCCTC 60.271 52.381 0.00 0.00 0.00 4.30
2457 2551 1.060729 TCCGAACCAACAATCCCTCA 58.939 50.000 0.00 0.00 0.00 3.86
2458 2552 1.422024 TCCGAACCAACAATCCCTCAA 59.578 47.619 0.00 0.00 0.00 3.02
2459 2553 2.041081 TCCGAACCAACAATCCCTCAAT 59.959 45.455 0.00 0.00 0.00 2.57
2460 2554 2.164219 CCGAACCAACAATCCCTCAATG 59.836 50.000 0.00 0.00 0.00 2.82
2461 2555 2.164219 CGAACCAACAATCCCTCAATGG 59.836 50.000 0.00 0.00 0.00 3.16
2462 2556 2.999185 ACCAACAATCCCTCAATGGT 57.001 45.000 0.00 0.00 36.38 3.55
2463 2557 2.528564 ACCAACAATCCCTCAATGGTG 58.471 47.619 0.00 0.00 39.57 4.17
2464 2558 1.826720 CCAACAATCCCTCAATGGTGG 59.173 52.381 0.00 0.00 44.79 4.61
2465 2559 1.205417 CAACAATCCCTCAATGGTGGC 59.795 52.381 0.00 0.00 0.00 5.01
2466 2560 0.409092 ACAATCCCTCAATGGTGGCA 59.591 50.000 0.00 0.00 0.00 4.92
2467 2561 1.108776 CAATCCCTCAATGGTGGCAG 58.891 55.000 0.00 0.00 0.00 4.85
2468 2562 0.706433 AATCCCTCAATGGTGGCAGT 59.294 50.000 0.00 0.00 0.00 4.40
2469 2563 0.033796 ATCCCTCAATGGTGGCAGTG 60.034 55.000 0.00 0.00 0.00 3.66
2470 2564 1.679977 CCCTCAATGGTGGCAGTGG 60.680 63.158 0.00 0.00 0.00 4.00
2471 2565 1.075482 CCTCAATGGTGGCAGTGGT 59.925 57.895 0.00 0.00 0.00 4.16
2472 2566 0.962356 CCTCAATGGTGGCAGTGGTC 60.962 60.000 0.00 0.00 0.00 4.02
2473 2567 0.962356 CTCAATGGTGGCAGTGGTCC 60.962 60.000 0.00 0.00 0.00 4.46
2474 2568 1.978617 CAATGGTGGCAGTGGTCCC 60.979 63.158 0.00 0.00 0.00 4.46
2475 2569 2.162906 AATGGTGGCAGTGGTCCCT 61.163 57.895 0.00 0.00 0.00 4.20
2476 2570 1.729267 AATGGTGGCAGTGGTCCCTT 61.729 55.000 0.00 0.00 0.00 3.95
2477 2571 1.729267 ATGGTGGCAGTGGTCCCTTT 61.729 55.000 0.00 0.00 0.00 3.11
2478 2572 1.152546 GGTGGCAGTGGTCCCTTTT 60.153 57.895 0.00 0.00 0.00 2.27
2479 2573 1.179174 GGTGGCAGTGGTCCCTTTTC 61.179 60.000 0.00 0.00 0.00 2.29
2480 2574 0.178990 GTGGCAGTGGTCCCTTTTCT 60.179 55.000 0.00 0.00 0.00 2.52
2481 2575 1.073284 GTGGCAGTGGTCCCTTTTCTA 59.927 52.381 0.00 0.00 0.00 2.10
2482 2576 1.351017 TGGCAGTGGTCCCTTTTCTAG 59.649 52.381 0.00 0.00 0.00 2.43
2483 2577 1.351350 GGCAGTGGTCCCTTTTCTAGT 59.649 52.381 0.00 0.00 0.00 2.57
2484 2578 2.615747 GGCAGTGGTCCCTTTTCTAGTC 60.616 54.545 0.00 0.00 0.00 2.59
2485 2579 2.615747 GCAGTGGTCCCTTTTCTAGTCC 60.616 54.545 0.00 0.00 0.00 3.85
2486 2580 1.900486 AGTGGTCCCTTTTCTAGTCCG 59.100 52.381 0.00 0.00 0.00 4.79
2487 2581 1.622312 GTGGTCCCTTTTCTAGTCCGT 59.378 52.381 0.00 0.00 0.00 4.69
2488 2582 1.897802 TGGTCCCTTTTCTAGTCCGTC 59.102 52.381 0.00 0.00 0.00 4.79
2489 2583 1.897802 GGTCCCTTTTCTAGTCCGTCA 59.102 52.381 0.00 0.00 0.00 4.35
2490 2584 2.500504 GGTCCCTTTTCTAGTCCGTCAT 59.499 50.000 0.00 0.00 0.00 3.06
2491 2585 3.430513 GGTCCCTTTTCTAGTCCGTCATC 60.431 52.174 0.00 0.00 0.00 2.92
2492 2586 3.194968 GTCCCTTTTCTAGTCCGTCATCA 59.805 47.826 0.00 0.00 0.00 3.07
2493 2587 3.194968 TCCCTTTTCTAGTCCGTCATCAC 59.805 47.826 0.00 0.00 0.00 3.06
2494 2588 3.195825 CCCTTTTCTAGTCCGTCATCACT 59.804 47.826 0.00 0.00 0.00 3.41
2495 2589 4.401519 CCCTTTTCTAGTCCGTCATCACTA 59.598 45.833 0.00 0.00 0.00 2.74
2496 2590 5.450688 CCCTTTTCTAGTCCGTCATCACTAG 60.451 48.000 0.00 0.00 42.44 2.57
2497 2591 5.125739 CCTTTTCTAGTCCGTCATCACTAGT 59.874 44.000 6.11 0.00 41.95 2.57
2498 2592 6.350277 CCTTTTCTAGTCCGTCATCACTAGTT 60.350 42.308 0.00 0.00 41.95 2.24
2499 2593 5.814764 TTCTAGTCCGTCATCACTAGTTC 57.185 43.478 0.00 0.00 41.95 3.01
2500 2594 5.100344 TCTAGTCCGTCATCACTAGTTCT 57.900 43.478 0.00 0.00 41.95 3.01
2501 2595 5.498393 TCTAGTCCGTCATCACTAGTTCTT 58.502 41.667 0.00 0.00 41.95 2.52
2502 2596 5.944599 TCTAGTCCGTCATCACTAGTTCTTT 59.055 40.000 0.00 0.00 41.95 2.52
2503 2597 5.470047 AGTCCGTCATCACTAGTTCTTTT 57.530 39.130 0.00 0.00 0.00 2.27
2504 2598 5.855045 AGTCCGTCATCACTAGTTCTTTTT 58.145 37.500 0.00 0.00 0.00 1.94
2523 2617 3.669939 TTTCTTCCATTGATCCCTCCC 57.330 47.619 0.00 0.00 0.00 4.30
2524 2618 2.285275 TCTTCCATTGATCCCTCCCA 57.715 50.000 0.00 0.00 0.00 4.37
2525 2619 2.130193 TCTTCCATTGATCCCTCCCAG 58.870 52.381 0.00 0.00 0.00 4.45
2526 2620 0.552848 TTCCATTGATCCCTCCCAGC 59.447 55.000 0.00 0.00 0.00 4.85
2527 2621 0.624206 TCCATTGATCCCTCCCAGCA 60.624 55.000 0.00 0.00 0.00 4.41
2528 2622 0.259647 CCATTGATCCCTCCCAGCAA 59.740 55.000 0.00 0.00 0.00 3.91
2529 2623 1.342275 CCATTGATCCCTCCCAGCAAA 60.342 52.381 0.00 0.00 0.00 3.68
2530 2624 2.459644 CATTGATCCCTCCCAGCAAAA 58.540 47.619 0.00 0.00 0.00 2.44
2531 2625 2.692709 TTGATCCCTCCCAGCAAAAA 57.307 45.000 0.00 0.00 0.00 1.94
2553 2647 2.906691 AGCACACTATCATGGAGAGC 57.093 50.000 0.00 0.00 0.00 4.09
2554 2648 2.113807 AGCACACTATCATGGAGAGCA 58.886 47.619 0.00 0.00 0.00 4.26
2555 2649 2.502947 AGCACACTATCATGGAGAGCAA 59.497 45.455 0.00 0.00 0.00 3.91
2556 2650 3.054875 AGCACACTATCATGGAGAGCAAA 60.055 43.478 0.00 0.00 0.00 3.68
2557 2651 3.691118 GCACACTATCATGGAGAGCAAAA 59.309 43.478 0.00 0.00 0.00 2.44
2558 2652 4.437930 GCACACTATCATGGAGAGCAAAAC 60.438 45.833 0.00 0.00 0.00 2.43
2559 2653 4.940046 CACACTATCATGGAGAGCAAAACT 59.060 41.667 0.00 0.00 0.00 2.66
2560 2654 5.413833 CACACTATCATGGAGAGCAAAACTT 59.586 40.000 0.00 0.00 0.00 2.66
2561 2655 5.413833 ACACTATCATGGAGAGCAAAACTTG 59.586 40.000 0.00 0.00 0.00 3.16
2562 2656 4.946157 ACTATCATGGAGAGCAAAACTTGG 59.054 41.667 0.00 0.00 0.00 3.61
2563 2657 1.888512 TCATGGAGAGCAAAACTTGGC 59.111 47.619 0.00 0.00 0.00 4.52
2564 2658 1.891150 CATGGAGAGCAAAACTTGGCT 59.109 47.619 0.00 0.00 44.48 4.75
2568 2662 2.331265 GAGCAAAACTTGGCTCGGT 58.669 52.632 3.11 0.00 46.01 4.69
2569 2663 0.238553 GAGCAAAACTTGGCTCGGTC 59.761 55.000 3.11 0.00 46.01 4.79
2570 2664 0.465460 AGCAAAACTTGGCTCGGTCA 60.465 50.000 0.00 0.00 34.76 4.02
2571 2665 0.317854 GCAAAACTTGGCTCGGTCAC 60.318 55.000 0.00 0.00 0.00 3.67
2572 2666 0.310854 CAAAACTTGGCTCGGTCACC 59.689 55.000 0.00 0.00 0.00 4.02
2573 2667 0.106918 AAAACTTGGCTCGGTCACCA 60.107 50.000 0.00 0.00 0.00 4.17
2574 2668 0.818040 AAACTTGGCTCGGTCACCAC 60.818 55.000 0.00 0.00 35.10 4.16
2575 2669 1.696097 AACTTGGCTCGGTCACCACT 61.696 55.000 0.00 0.00 35.10 4.00
2576 2670 1.071471 CTTGGCTCGGTCACCACTT 59.929 57.895 0.00 0.00 35.10 3.16
2577 2671 0.535102 CTTGGCTCGGTCACCACTTT 60.535 55.000 0.00 0.00 35.10 2.66
2578 2672 0.106918 TTGGCTCGGTCACCACTTTT 60.107 50.000 0.00 0.00 35.10 2.27
2579 2673 0.817634 TGGCTCGGTCACCACTTTTG 60.818 55.000 0.00 0.00 0.00 2.44
2580 2674 0.818040 GGCTCGGTCACCACTTTTGT 60.818 55.000 0.00 0.00 0.00 2.83
2581 2675 0.586802 GCTCGGTCACCACTTTTGTC 59.413 55.000 0.00 0.00 0.00 3.18
2582 2676 1.948104 CTCGGTCACCACTTTTGTCA 58.052 50.000 0.00 0.00 0.00 3.58
2583 2677 1.867233 CTCGGTCACCACTTTTGTCAG 59.133 52.381 0.00 0.00 0.00 3.51
2584 2678 1.208535 TCGGTCACCACTTTTGTCAGT 59.791 47.619 0.00 0.00 0.00 3.41
2585 2679 1.330521 CGGTCACCACTTTTGTCAGTG 59.669 52.381 0.00 0.00 43.46 3.66
2586 2680 2.639065 GGTCACCACTTTTGTCAGTGA 58.361 47.619 2.32 0.00 46.29 3.41
2587 2681 2.614057 GGTCACCACTTTTGTCAGTGAG 59.386 50.000 0.00 0.00 46.29 3.51
2588 2682 2.614057 GTCACCACTTTTGTCAGTGAGG 59.386 50.000 0.00 0.00 46.29 3.86
2589 2683 2.503765 TCACCACTTTTGTCAGTGAGGA 59.496 45.455 0.00 0.00 46.29 3.71
2590 2684 3.054728 TCACCACTTTTGTCAGTGAGGAA 60.055 43.478 0.00 0.00 46.29 3.36
2591 2685 3.065371 CACCACTTTTGTCAGTGAGGAAC 59.935 47.826 0.00 0.00 46.29 3.62
2592 2686 2.618709 CCACTTTTGTCAGTGAGGAACC 59.381 50.000 0.00 0.00 46.29 3.62
2593 2687 2.287915 CACTTTTGTCAGTGAGGAACCG 59.712 50.000 0.00 0.00 46.29 4.44
2594 2688 1.873591 CTTTTGTCAGTGAGGAACCGG 59.126 52.381 0.00 0.00 0.00 5.28
2595 2689 0.107831 TTTGTCAGTGAGGAACCGGG 59.892 55.000 6.32 0.00 0.00 5.73
2596 2690 2.047179 GTCAGTGAGGAACCGGGC 60.047 66.667 6.32 0.00 0.00 6.13
2597 2691 2.203788 TCAGTGAGGAACCGGGCT 60.204 61.111 6.32 0.00 0.00 5.19
2598 2692 2.266055 CAGTGAGGAACCGGGCTC 59.734 66.667 6.32 0.98 0.00 4.70
2599 2693 3.003763 AGTGAGGAACCGGGCTCC 61.004 66.667 15.39 15.39 0.00 4.70
2600 2694 3.003763 GTGAGGAACCGGGCTCCT 61.004 66.667 23.55 23.55 46.40 3.69
2603 2697 2.685380 AGGAACCGGGCTCCTCTG 60.685 66.667 19.11 0.00 39.16 3.35
2604 2698 4.475135 GGAACCGGGCTCCTCTGC 62.475 72.222 15.79 0.00 0.00 4.26
2605 2699 3.706373 GAACCGGGCTCCTCTGCA 61.706 66.667 6.32 0.00 34.04 4.41
2606 2700 3.249189 AACCGGGCTCCTCTGCAA 61.249 61.111 6.32 0.00 34.04 4.08
2607 2701 3.259633 AACCGGGCTCCTCTGCAAG 62.260 63.158 6.32 0.00 34.04 4.01
2608 2702 3.393970 CCGGGCTCCTCTGCAAGA 61.394 66.667 0.00 0.00 43.69 3.02
2621 2715 2.811317 CAAGAGCACGTCCGCCTC 60.811 66.667 0.00 0.00 0.00 4.70
2622 2716 2.992114 AAGAGCACGTCCGCCTCT 60.992 61.111 5.09 5.09 0.00 3.69
2623 2717 1.677966 AAGAGCACGTCCGCCTCTA 60.678 57.895 9.82 0.00 0.00 2.43
2624 2718 1.935327 AAGAGCACGTCCGCCTCTAC 61.935 60.000 9.82 0.00 0.00 2.59
2625 2719 2.675423 AGCACGTCCGCCTCTACA 60.675 61.111 0.00 0.00 0.00 2.74
2626 2720 2.209064 GAGCACGTCCGCCTCTACAA 62.209 60.000 0.00 0.00 0.00 2.41
2627 2721 1.805945 GCACGTCCGCCTCTACAAG 60.806 63.158 0.00 0.00 0.00 3.16
2628 2722 1.805945 CACGTCCGCCTCTACAAGC 60.806 63.158 0.00 0.00 0.00 4.01
2629 2723 2.273179 ACGTCCGCCTCTACAAGCA 61.273 57.895 0.00 0.00 0.00 3.91
2630 2724 1.517257 CGTCCGCCTCTACAAGCAG 60.517 63.158 0.00 0.00 0.00 4.24
2631 2725 1.811679 GTCCGCCTCTACAAGCAGC 60.812 63.158 0.00 0.00 0.00 5.25
2632 2726 2.265739 CCGCCTCTACAAGCAGCA 59.734 61.111 0.00 0.00 0.00 4.41
2633 2727 2.103042 CCGCCTCTACAAGCAGCAC 61.103 63.158 0.00 0.00 0.00 4.40
2634 2728 2.103042 CGCCTCTACAAGCAGCACC 61.103 63.158 0.00 0.00 0.00 5.01
2635 2729 1.298014 GCCTCTACAAGCAGCACCT 59.702 57.895 0.00 0.00 0.00 4.00
2636 2730 0.322008 GCCTCTACAAGCAGCACCTT 60.322 55.000 0.00 0.00 0.00 3.50
2637 2731 1.884067 GCCTCTACAAGCAGCACCTTT 60.884 52.381 0.00 0.00 0.00 3.11
2638 2732 2.508526 CCTCTACAAGCAGCACCTTTT 58.491 47.619 0.00 0.00 0.00 2.27
2639 2733 2.227388 CCTCTACAAGCAGCACCTTTTG 59.773 50.000 0.00 0.00 0.00 2.44
2652 2746 4.311816 CACCTTTTGCATGAGTTGAACT 57.688 40.909 0.00 0.00 0.00 3.01
2653 2747 4.046462 CACCTTTTGCATGAGTTGAACTG 58.954 43.478 0.90 0.00 0.00 3.16
2654 2748 3.953612 ACCTTTTGCATGAGTTGAACTGA 59.046 39.130 0.90 0.00 0.00 3.41
2655 2749 4.202050 ACCTTTTGCATGAGTTGAACTGAC 60.202 41.667 0.90 0.00 0.00 3.51
2656 2750 4.037208 CCTTTTGCATGAGTTGAACTGACT 59.963 41.667 0.90 0.00 0.00 3.41
2657 2751 5.239306 CCTTTTGCATGAGTTGAACTGACTA 59.761 40.000 0.90 0.00 0.00 2.59
2658 2752 5.673337 TTTGCATGAGTTGAACTGACTAC 57.327 39.130 0.90 0.00 0.00 2.73
2659 2753 4.335400 TGCATGAGTTGAACTGACTACA 57.665 40.909 0.90 0.00 0.00 2.74
2660 2754 4.058124 TGCATGAGTTGAACTGACTACAC 58.942 43.478 0.90 0.00 0.00 2.90
2661 2755 3.433615 GCATGAGTTGAACTGACTACACC 59.566 47.826 0.90 0.00 0.00 4.16
2662 2756 3.364889 TGAGTTGAACTGACTACACCG 57.635 47.619 0.90 0.00 0.00 4.94
2663 2757 2.953648 TGAGTTGAACTGACTACACCGA 59.046 45.455 0.90 0.00 0.00 4.69
2664 2758 3.572682 TGAGTTGAACTGACTACACCGAT 59.427 43.478 0.90 0.00 0.00 4.18
2665 2759 3.914312 AGTTGAACTGACTACACCGATG 58.086 45.455 0.00 0.00 0.00 3.84
2666 2760 3.321111 AGTTGAACTGACTACACCGATGT 59.679 43.478 0.00 0.00 43.30 3.06
2677 2771 2.505982 CCGATGTGGTAGCTGGGG 59.494 66.667 0.00 0.00 0.00 4.96
2678 2772 2.203070 CGATGTGGTAGCTGGGGC 60.203 66.667 0.00 0.00 39.06 5.80
2679 2773 2.998097 GATGTGGTAGCTGGGGCA 59.002 61.111 0.00 0.00 41.70 5.36
2680 2774 1.452108 GATGTGGTAGCTGGGGCAC 60.452 63.158 0.00 0.00 41.70 5.01
2693 2787 4.722700 GGCACCCGTCCAGCATGT 62.723 66.667 0.00 0.00 0.00 3.21
2694 2788 2.267642 GCACCCGTCCAGCATGTA 59.732 61.111 0.00 0.00 0.00 2.29
2695 2789 1.815421 GCACCCGTCCAGCATGTAG 60.815 63.158 0.00 0.00 0.00 2.74
2696 2790 1.815421 CACCCGTCCAGCATGTAGC 60.815 63.158 0.00 0.00 46.19 3.58
2705 2799 4.131376 GCATGTAGCGCTGGACAT 57.869 55.556 22.90 20.04 36.73 3.06
2707 2801 1.645455 CATGTAGCGCTGGACATGC 59.355 57.895 30.22 6.77 44.59 4.06
2708 2802 1.524621 ATGTAGCGCTGGACATGCC 60.525 57.895 21.90 0.00 34.98 4.40
2709 2803 2.897350 GTAGCGCTGGACATGCCC 60.897 66.667 22.90 0.00 34.97 5.36
2710 2804 3.083349 TAGCGCTGGACATGCCCT 61.083 61.111 22.90 0.00 34.97 5.19
2711 2805 1.760480 TAGCGCTGGACATGCCCTA 60.760 57.895 22.90 0.00 34.97 3.53
2712 2806 1.334384 TAGCGCTGGACATGCCCTAA 61.334 55.000 22.90 0.00 34.97 2.69
2713 2807 2.182842 GCGCTGGACATGCCCTAAG 61.183 63.158 0.00 0.00 34.97 2.18
2714 2808 1.524621 CGCTGGACATGCCCTAAGG 60.525 63.158 0.00 0.00 34.97 2.69
2769 2863 0.390472 CTTGGCGAGACAGACCTTCC 60.390 60.000 0.00 0.00 0.00 3.46
2776 2870 2.593257 GAGACAGACCTTCCGTTTACG 58.407 52.381 0.00 0.00 39.44 3.18
2779 2873 3.257624 AGACAGACCTTCCGTTTACGAAT 59.742 43.478 3.46 0.00 43.02 3.34
2781 2875 3.006110 ACAGACCTTCCGTTTACGAATGA 59.994 43.478 3.46 0.00 43.02 2.57
2803 2897 9.790389 AATGACGATATAGAATTCGTATTCTCC 57.210 33.333 19.07 7.98 45.82 3.71
2810 2904 9.950496 ATATAGAATTCGTATTCTCCAGCAAAT 57.050 29.630 19.07 9.18 45.82 2.32
2816 2910 4.631377 TCGTATTCTCCAGCAAATGAACAG 59.369 41.667 0.00 0.00 0.00 3.16
2819 2913 5.886960 ATTCTCCAGCAAATGAACAGTAC 57.113 39.130 0.00 0.00 0.00 2.73
2830 2924 6.691388 GCAAATGAACAGTACTTTTTCTTCGT 59.309 34.615 12.96 0.00 0.00 3.85
2832 2926 6.920569 ATGAACAGTACTTTTTCTTCGTGT 57.079 33.333 12.96 0.00 0.00 4.49
2840 2934 2.181426 TTTTCTTCGTGTGGCAAACG 57.819 45.000 23.90 23.90 42.36 3.60
2925 3019 6.012658 TCTCAGGTTTGTGTTTGCATAATC 57.987 37.500 0.00 0.00 0.00 1.75
2928 3022 4.853196 CAGGTTTGTGTTTGCATAATCTCG 59.147 41.667 0.00 0.00 0.00 4.04
2953 3047 3.010420 GCCATCTTCGCCTAATATTCCC 58.990 50.000 0.00 0.00 0.00 3.97
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 1.178534 TGCCACCTTTGCCTTACTGC 61.179 55.000 0.00 0.00 0.00 4.40
59 71 4.877619 TGGCGCAACGGGGTTGAA 62.878 61.111 10.83 0.00 45.28 2.69
73 85 1.635663 CTCACGATGGACCGTTTGGC 61.636 60.000 0.00 0.00 41.29 4.52
78 90 1.475403 AGATTCTCACGATGGACCGT 58.525 50.000 0.00 0.00 44.43 4.83
87 99 3.384789 TCCTCCATGGTAAGATTCTCACG 59.615 47.826 12.58 0.00 37.07 4.35
115 127 9.374838 GGAACGGAAATGTAAACTCTTCTATTA 57.625 33.333 0.00 0.00 0.00 0.98
116 128 7.881232 TGGAACGGAAATGTAAACTCTTCTATT 59.119 33.333 0.00 0.00 0.00 1.73
127 139 3.085533 CCCATGTGGAACGGAAATGTAA 58.914 45.455 0.00 0.00 42.39 2.41
137 149 0.038166 TTGGAGAGCCCATGTGGAAC 59.962 55.000 0.00 0.00 46.10 3.62
166 178 3.315191 CGGTGTCACCAAAAATTCTCAGT 59.685 43.478 21.91 0.00 38.47 3.41
171 183 4.497473 TCATCGGTGTCACCAAAAATTC 57.503 40.909 21.91 0.00 38.47 2.17
172 184 4.927978 TTCATCGGTGTCACCAAAAATT 57.072 36.364 21.91 0.00 38.47 1.82
173 185 5.221422 ACAATTCATCGGTGTCACCAAAAAT 60.221 36.000 21.91 11.80 38.47 1.82
174 186 4.098654 ACAATTCATCGGTGTCACCAAAAA 59.901 37.500 21.91 10.12 38.47 1.94
175 187 3.634448 ACAATTCATCGGTGTCACCAAAA 59.366 39.130 21.91 9.79 38.47 2.44
176 188 3.004210 CACAATTCATCGGTGTCACCAAA 59.996 43.478 21.91 9.54 38.47 3.28
177 189 2.551887 CACAATTCATCGGTGTCACCAA 59.448 45.455 21.91 3.47 38.47 3.67
178 190 2.150390 CACAATTCATCGGTGTCACCA 58.850 47.619 21.91 9.44 38.47 4.17
179 191 1.135689 GCACAATTCATCGGTGTCACC 60.136 52.381 12.40 12.40 35.05 4.02
180 192 1.135689 GGCACAATTCATCGGTGTCAC 60.136 52.381 0.00 0.00 37.13 3.67
181 193 1.164411 GGCACAATTCATCGGTGTCA 58.836 50.000 0.00 0.00 37.13 3.58
182 194 1.164411 TGGCACAATTCATCGGTGTC 58.836 50.000 0.00 0.00 37.64 3.67
183 195 3.337834 TGGCACAATTCATCGGTGT 57.662 47.368 0.00 0.00 35.05 4.16
199 211 1.406614 CCTCTTGCTCTGCCTACTTGG 60.407 57.143 0.00 0.00 39.35 3.61
200 212 1.552337 TCCTCTTGCTCTGCCTACTTG 59.448 52.381 0.00 0.00 0.00 3.16
201 213 1.830477 CTCCTCTTGCTCTGCCTACTT 59.170 52.381 0.00 0.00 0.00 2.24
202 214 1.272985 ACTCCTCTTGCTCTGCCTACT 60.273 52.381 0.00 0.00 0.00 2.57
203 215 1.190643 ACTCCTCTTGCTCTGCCTAC 58.809 55.000 0.00 0.00 0.00 3.18
204 216 2.828661 TACTCCTCTTGCTCTGCCTA 57.171 50.000 0.00 0.00 0.00 3.93
205 217 2.170187 CAATACTCCTCTTGCTCTGCCT 59.830 50.000 0.00 0.00 0.00 4.75
206 218 2.093235 ACAATACTCCTCTTGCTCTGCC 60.093 50.000 0.00 0.00 0.00 4.85
207 219 3.194062 GACAATACTCCTCTTGCTCTGC 58.806 50.000 0.00 0.00 0.00 4.26
208 220 3.736433 CGGACAATACTCCTCTTGCTCTG 60.736 52.174 0.00 0.00 0.00 3.35
209 221 2.428890 CGGACAATACTCCTCTTGCTCT 59.571 50.000 0.00 0.00 0.00 4.09
210 222 2.815478 CGGACAATACTCCTCTTGCTC 58.185 52.381 0.00 0.00 0.00 4.26
211 223 1.134670 GCGGACAATACTCCTCTTGCT 60.135 52.381 0.00 0.00 0.00 3.91
212 224 1.291132 GCGGACAATACTCCTCTTGC 58.709 55.000 0.00 0.00 0.00 4.01
213 225 2.672961 TGCGGACAATACTCCTCTTG 57.327 50.000 0.00 0.00 0.00 3.02
214 226 3.695830 TTTGCGGACAATACTCCTCTT 57.304 42.857 0.00 0.00 35.21 2.85
215 227 3.008049 ACTTTTGCGGACAATACTCCTCT 59.992 43.478 0.00 0.00 35.21 3.69
216 228 3.335579 ACTTTTGCGGACAATACTCCTC 58.664 45.455 0.00 0.00 35.21 3.71
217 229 3.418684 ACTTTTGCGGACAATACTCCT 57.581 42.857 0.00 0.00 35.21 3.69
218 230 3.119955 GGAACTTTTGCGGACAATACTCC 60.120 47.826 0.00 0.00 35.21 3.85
219 231 3.500680 TGGAACTTTTGCGGACAATACTC 59.499 43.478 0.00 0.00 35.21 2.59
220 232 3.482436 TGGAACTTTTGCGGACAATACT 58.518 40.909 0.00 0.00 35.21 2.12
221 233 3.907894 TGGAACTTTTGCGGACAATAC 57.092 42.857 0.00 0.00 35.21 1.89
222 234 4.920640 TTTGGAACTTTTGCGGACAATA 57.079 36.364 0.00 0.00 35.21 1.90
223 235 3.810310 TTTGGAACTTTTGCGGACAAT 57.190 38.095 0.00 0.00 35.21 2.71
224 236 3.491792 GGATTTGGAACTTTTGCGGACAA 60.492 43.478 0.00 0.00 0.00 3.18
225 237 2.035321 GGATTTGGAACTTTTGCGGACA 59.965 45.455 0.00 0.00 0.00 4.02
226 238 2.035321 TGGATTTGGAACTTTTGCGGAC 59.965 45.455 0.00 0.00 0.00 4.79
227 239 2.295909 CTGGATTTGGAACTTTTGCGGA 59.704 45.455 0.00 0.00 0.00 5.54
228 240 2.610232 CCTGGATTTGGAACTTTTGCGG 60.610 50.000 0.00 0.00 0.00 5.69
229 241 2.035832 ACCTGGATTTGGAACTTTTGCG 59.964 45.455 0.00 0.00 0.00 4.85
230 242 3.069443 TCACCTGGATTTGGAACTTTTGC 59.931 43.478 0.00 0.00 0.00 3.68
231 243 4.935352 TCACCTGGATTTGGAACTTTTG 57.065 40.909 0.00 0.00 0.00 2.44
232 244 5.473066 CATCACCTGGATTTGGAACTTTT 57.527 39.130 0.00 0.00 32.57 2.27
246 258 2.040544 GGCGGAACACCATCACCTG 61.041 63.158 0.00 0.00 0.00 4.00
247 259 2.063015 TTGGCGGAACACCATCACCT 62.063 55.000 0.00 0.00 41.73 4.00
248 260 1.602323 TTGGCGGAACACCATCACC 60.602 57.895 0.00 0.00 41.73 4.02
249 261 0.889186 AGTTGGCGGAACACCATCAC 60.889 55.000 0.62 0.00 41.73 3.06
250 262 0.888736 CAGTTGGCGGAACACCATCA 60.889 55.000 0.62 0.00 41.73 3.07
251 263 1.586154 CCAGTTGGCGGAACACCATC 61.586 60.000 0.62 0.00 41.73 3.51
252 264 1.603455 CCAGTTGGCGGAACACCAT 60.603 57.895 0.62 0.00 41.73 3.55
253 265 2.203280 CCAGTTGGCGGAACACCA 60.203 61.111 0.62 0.00 39.66 4.17
254 266 2.983592 CCCAGTTGGCGGAACACC 60.984 66.667 0.00 0.00 36.98 4.16
255 267 2.983592 CCCCAGTTGGCGGAACAC 60.984 66.667 0.00 0.00 36.98 3.32
256 268 1.706995 TAACCCCAGTTGGCGGAACA 61.707 55.000 11.24 0.00 36.98 3.18
257 269 0.537828 TTAACCCCAGTTGGCGGAAC 60.538 55.000 11.24 0.00 36.68 3.62
258 270 0.250989 CTTAACCCCAGTTGGCGGAA 60.251 55.000 11.24 0.00 36.68 4.30
259 271 1.128809 TCTTAACCCCAGTTGGCGGA 61.129 55.000 11.24 0.00 36.68 5.54
260 272 0.676782 CTCTTAACCCCAGTTGGCGG 60.677 60.000 0.00 0.00 36.68 6.13
261 273 1.305930 GCTCTTAACCCCAGTTGGCG 61.306 60.000 0.00 0.00 36.68 5.69
262 274 0.965866 GGCTCTTAACCCCAGTTGGC 60.966 60.000 0.00 0.00 36.68 4.52
263 275 0.404040 TGGCTCTTAACCCCAGTTGG 59.596 55.000 0.00 0.00 36.68 3.77
264 276 1.534729 GTGGCTCTTAACCCCAGTTG 58.465 55.000 0.00 0.00 36.68 3.16
265 277 0.036306 CGTGGCTCTTAACCCCAGTT 59.964 55.000 0.00 0.00 40.15 3.16
266 278 0.834687 TCGTGGCTCTTAACCCCAGT 60.835 55.000 0.00 0.00 0.00 4.00
267 279 0.323629 TTCGTGGCTCTTAACCCCAG 59.676 55.000 0.00 0.00 0.00 4.45
268 280 0.323629 CTTCGTGGCTCTTAACCCCA 59.676 55.000 0.00 0.00 0.00 4.96
269 281 0.323957 ACTTCGTGGCTCTTAACCCC 59.676 55.000 0.00 0.00 0.00 4.95
270 282 1.723220 GACTTCGTGGCTCTTAACCC 58.277 55.000 0.00 0.00 0.00 4.11
271 283 1.068055 TCGACTTCGTGGCTCTTAACC 60.068 52.381 0.00 0.00 40.80 2.85
272 284 2.342910 TCGACTTCGTGGCTCTTAAC 57.657 50.000 0.00 0.00 40.80 2.01
273 285 2.490509 TCATCGACTTCGTGGCTCTTAA 59.509 45.455 0.00 0.00 40.80 1.85
274 286 2.089201 TCATCGACTTCGTGGCTCTTA 58.911 47.619 0.00 0.00 40.80 2.10
275 287 0.888619 TCATCGACTTCGTGGCTCTT 59.111 50.000 0.00 0.00 40.80 2.85
276 288 0.171455 GTCATCGACTTCGTGGCTCT 59.829 55.000 0.00 0.00 40.80 4.09
277 289 1.134530 CGTCATCGACTTCGTGGCTC 61.135 60.000 0.00 0.00 40.80 4.70
278 290 1.154016 CGTCATCGACTTCGTGGCT 60.154 57.895 0.00 0.00 40.80 4.75
279 291 2.158959 CCGTCATCGACTTCGTGGC 61.159 63.158 0.00 0.00 40.80 5.01
280 292 1.071019 CACCGTCATCGACTTCGTGG 61.071 60.000 0.00 0.00 40.80 4.94
281 293 1.071019 CCACCGTCATCGACTTCGTG 61.071 60.000 0.00 0.00 40.80 4.35
282 294 1.211969 CCACCGTCATCGACTTCGT 59.788 57.895 0.00 0.00 40.80 3.85
283 295 2.158959 GCCACCGTCATCGACTTCG 61.159 63.158 0.00 0.00 39.71 3.79
284 296 1.810030 GGCCACCGTCATCGACTTC 60.810 63.158 0.00 0.00 39.71 3.01
285 297 2.107041 TTGGCCACCGTCATCGACTT 62.107 55.000 3.88 0.00 39.71 3.01
286 298 2.507110 CTTGGCCACCGTCATCGACT 62.507 60.000 3.88 0.00 39.71 4.18
287 299 2.047655 TTGGCCACCGTCATCGAC 60.048 61.111 3.88 0.00 39.71 4.20
288 300 2.264480 CTTGGCCACCGTCATCGA 59.736 61.111 3.88 0.00 39.71 3.59
289 301 2.100631 GTCTTGGCCACCGTCATCG 61.101 63.158 3.88 0.00 0.00 3.84
290 302 0.605319 TTGTCTTGGCCACCGTCATC 60.605 55.000 3.88 0.00 0.00 2.92
291 303 0.889186 GTTGTCTTGGCCACCGTCAT 60.889 55.000 3.88 0.00 0.00 3.06
292 304 1.525077 GTTGTCTTGGCCACCGTCA 60.525 57.895 3.88 0.24 0.00 4.35
293 305 2.604174 CGTTGTCTTGGCCACCGTC 61.604 63.158 3.88 0.00 0.00 4.79
294 306 2.590575 CGTTGTCTTGGCCACCGT 60.591 61.111 3.88 0.00 0.00 4.83
295 307 1.890041 TTCGTTGTCTTGGCCACCG 60.890 57.895 3.88 0.00 0.00 4.94
296 308 0.818040 AGTTCGTTGTCTTGGCCACC 60.818 55.000 3.88 0.00 0.00 4.61
297 309 0.586802 GAGTTCGTTGTCTTGGCCAC 59.413 55.000 3.88 0.00 0.00 5.01
298 310 0.534203 GGAGTTCGTTGTCTTGGCCA 60.534 55.000 0.00 0.00 0.00 5.36
299 311 0.534203 TGGAGTTCGTTGTCTTGGCC 60.534 55.000 0.00 0.00 0.00 5.36
300 312 0.868406 CTGGAGTTCGTTGTCTTGGC 59.132 55.000 0.00 0.00 0.00 4.52
301 313 2.526304 TCTGGAGTTCGTTGTCTTGG 57.474 50.000 0.00 0.00 0.00 3.61
302 314 3.458189 AGTTCTGGAGTTCGTTGTCTTG 58.542 45.455 0.00 0.00 0.00 3.02
303 315 3.821421 AGTTCTGGAGTTCGTTGTCTT 57.179 42.857 0.00 0.00 0.00 3.01
304 316 3.821421 AAGTTCTGGAGTTCGTTGTCT 57.179 42.857 0.00 0.00 0.00 3.41
305 317 3.988517 CCTAAGTTCTGGAGTTCGTTGTC 59.011 47.826 0.00 0.00 0.00 3.18
306 318 3.244112 CCCTAAGTTCTGGAGTTCGTTGT 60.244 47.826 0.00 0.00 0.00 3.32
307 319 3.326747 CCCTAAGTTCTGGAGTTCGTTG 58.673 50.000 0.00 0.00 0.00 4.10
308 320 2.289506 GCCCTAAGTTCTGGAGTTCGTT 60.290 50.000 0.00 0.00 0.00 3.85
309 321 1.275573 GCCCTAAGTTCTGGAGTTCGT 59.724 52.381 0.00 0.00 0.00 3.85
310 322 1.275291 TGCCCTAAGTTCTGGAGTTCG 59.725 52.381 0.00 0.00 0.00 3.95
311 323 3.198853 AGATGCCCTAAGTTCTGGAGTTC 59.801 47.826 0.00 0.00 0.00 3.01
312 324 3.185455 AGATGCCCTAAGTTCTGGAGTT 58.815 45.455 0.00 0.00 0.00 3.01
313 325 2.769095 GAGATGCCCTAAGTTCTGGAGT 59.231 50.000 0.00 0.00 0.00 3.85
314 326 2.103941 GGAGATGCCCTAAGTTCTGGAG 59.896 54.545 0.00 0.00 0.00 3.86
315 327 2.119495 GGAGATGCCCTAAGTTCTGGA 58.881 52.381 0.00 0.00 0.00 3.86
316 328 1.839994 TGGAGATGCCCTAAGTTCTGG 59.160 52.381 0.00 0.00 34.97 3.86
317 329 2.744494 GCTGGAGATGCCCTAAGTTCTG 60.744 54.545 0.00 0.00 34.97 3.02
318 330 1.488393 GCTGGAGATGCCCTAAGTTCT 59.512 52.381 0.00 0.00 34.97 3.01
319 331 1.475930 GGCTGGAGATGCCCTAAGTTC 60.476 57.143 0.00 0.00 44.32 3.01
320 332 0.548510 GGCTGGAGATGCCCTAAGTT 59.451 55.000 0.00 0.00 44.32 2.66
321 333 2.225792 GGCTGGAGATGCCCTAAGT 58.774 57.895 0.00 0.00 44.32 2.24
754 781 4.008933 GCACAGGCGAGTGGAGGT 62.009 66.667 13.56 0.00 39.87 3.85
1306 1350 0.537188 CCCTTGAGGTACGTGAGCAT 59.463 55.000 0.00 0.00 0.00 3.79
2255 2349 4.086457 GGAACCCGGAAATATATGGCAAT 58.914 43.478 0.73 0.00 0.00 3.56
2259 2353 4.082245 GCATTGGAACCCGGAAATATATGG 60.082 45.833 0.73 0.00 0.00 2.74
2261 2355 4.086457 GGCATTGGAACCCGGAAATATAT 58.914 43.478 0.73 0.00 0.00 0.86
2269 2363 0.897863 TCTTTGGCATTGGAACCCGG 60.898 55.000 0.00 0.00 0.00 5.73
2276 2370 1.542915 CACCTGACTCTTTGGCATTGG 59.457 52.381 0.00 0.00 30.31 3.16
2292 2386 1.671742 CTTCGCCACCACTACACCT 59.328 57.895 0.00 0.00 0.00 4.00
2293 2387 2.033194 GCTTCGCCACCACTACACC 61.033 63.158 0.00 0.00 0.00 4.16
2304 2398 3.553095 AAGGTCAGGGTGCTTCGCC 62.553 63.158 0.00 0.00 0.00 5.54
2306 2400 2.328099 GCAAGGTCAGGGTGCTTCG 61.328 63.158 0.00 0.00 35.36 3.79
2316 2410 1.608055 CATGACAACTGGCAAGGTCA 58.392 50.000 15.09 15.09 43.61 4.02
2358 2452 4.631377 CCATCATTGTACATGCCCGTATAG 59.369 45.833 0.00 0.00 0.00 1.31
2363 2457 0.311790 GCCATCATTGTACATGCCCG 59.688 55.000 0.00 0.00 0.00 6.13
2368 2462 3.900971 TGGTGATGCCATCATTGTACAT 58.099 40.909 11.14 0.00 43.61 2.29
2369 2463 3.362870 TGGTGATGCCATCATTGTACA 57.637 42.857 11.14 3.19 43.61 2.90
2385 2479 3.968837 ATGGGGCAGCACCATGGTG 62.969 63.158 36.07 36.07 46.57 4.17
2386 2480 3.675790 ATGGGGCAGCACCATGGT 61.676 61.111 29.55 13.00 46.57 3.55
2397 2491 0.321021 TTGTGTGAAATGCATGGGGC 59.679 50.000 0.00 0.00 45.13 5.80
2398 2492 4.675976 ATATTGTGTGAAATGCATGGGG 57.324 40.909 0.00 0.00 0.00 4.96
2399 2493 6.988622 AAAATATTGTGTGAAATGCATGGG 57.011 33.333 0.00 0.00 0.00 4.00
2416 2510 9.391006 TCGGACAGTAGCTTCAAATAAAAATAT 57.609 29.630 0.00 0.00 0.00 1.28
2417 2511 8.780846 TCGGACAGTAGCTTCAAATAAAAATA 57.219 30.769 0.00 0.00 0.00 1.40
2418 2512 7.681939 TCGGACAGTAGCTTCAAATAAAAAT 57.318 32.000 0.00 0.00 0.00 1.82
2419 2513 7.357303 GTTCGGACAGTAGCTTCAAATAAAAA 58.643 34.615 0.00 0.00 0.00 1.94
2420 2514 6.072893 GGTTCGGACAGTAGCTTCAAATAAAA 60.073 38.462 0.00 0.00 0.00 1.52
2421 2515 5.410439 GGTTCGGACAGTAGCTTCAAATAAA 59.590 40.000 0.00 0.00 0.00 1.40
2422 2516 4.933400 GGTTCGGACAGTAGCTTCAAATAA 59.067 41.667 0.00 0.00 0.00 1.40
2423 2517 4.020928 TGGTTCGGACAGTAGCTTCAAATA 60.021 41.667 0.00 0.00 0.00 1.40
2424 2518 3.244422 TGGTTCGGACAGTAGCTTCAAAT 60.244 43.478 0.00 0.00 0.00 2.32
2425 2519 2.103432 TGGTTCGGACAGTAGCTTCAAA 59.897 45.455 0.00 0.00 0.00 2.69
2426 2520 1.689813 TGGTTCGGACAGTAGCTTCAA 59.310 47.619 0.00 0.00 0.00 2.69
2427 2521 1.334160 TGGTTCGGACAGTAGCTTCA 58.666 50.000 0.00 0.00 0.00 3.02
2428 2522 2.067013 GTTGGTTCGGACAGTAGCTTC 58.933 52.381 0.00 0.00 0.00 3.86
2429 2523 1.414919 TGTTGGTTCGGACAGTAGCTT 59.585 47.619 0.00 0.00 0.00 3.74
2430 2524 1.045407 TGTTGGTTCGGACAGTAGCT 58.955 50.000 0.00 0.00 0.00 3.32
2431 2525 1.873698 TTGTTGGTTCGGACAGTAGC 58.126 50.000 0.00 0.00 0.00 3.58
2432 2526 3.000727 GGATTGTTGGTTCGGACAGTAG 58.999 50.000 0.00 0.00 0.00 2.57
2433 2527 2.289819 GGGATTGTTGGTTCGGACAGTA 60.290 50.000 0.00 0.00 0.00 2.74
2434 2528 1.544759 GGGATTGTTGGTTCGGACAGT 60.545 52.381 0.00 0.00 0.00 3.55
2435 2529 1.165270 GGGATTGTTGGTTCGGACAG 58.835 55.000 0.00 0.00 0.00 3.51
2436 2530 0.768622 AGGGATTGTTGGTTCGGACA 59.231 50.000 0.00 0.00 0.00 4.02
2437 2531 1.271163 TGAGGGATTGTTGGTTCGGAC 60.271 52.381 0.00 0.00 0.00 4.79
2438 2532 1.060729 TGAGGGATTGTTGGTTCGGA 58.939 50.000 0.00 0.00 0.00 4.55
2439 2533 1.904287 TTGAGGGATTGTTGGTTCGG 58.096 50.000 0.00 0.00 0.00 4.30
2440 2534 2.164219 CCATTGAGGGATTGTTGGTTCG 59.836 50.000 0.00 0.00 0.00 3.95
2441 2535 3.056607 CACCATTGAGGGATTGTTGGTTC 60.057 47.826 0.00 0.00 43.89 3.62
2442 2536 2.899256 CACCATTGAGGGATTGTTGGTT 59.101 45.455 0.00 0.00 43.89 3.67
2443 2537 2.528564 CACCATTGAGGGATTGTTGGT 58.471 47.619 0.00 0.00 43.89 3.67
2444 2538 1.826720 CCACCATTGAGGGATTGTTGG 59.173 52.381 0.00 0.00 43.89 3.77
2445 2539 1.205417 GCCACCATTGAGGGATTGTTG 59.795 52.381 0.00 0.00 43.89 3.33
2446 2540 1.203162 TGCCACCATTGAGGGATTGTT 60.203 47.619 0.00 0.00 43.89 2.83
2447 2541 0.409092 TGCCACCATTGAGGGATTGT 59.591 50.000 0.00 0.00 43.89 2.71
2448 2542 1.108776 CTGCCACCATTGAGGGATTG 58.891 55.000 0.00 0.00 43.89 2.67
2449 2543 0.706433 ACTGCCACCATTGAGGGATT 59.294 50.000 0.00 0.00 43.89 3.01
2450 2544 0.033796 CACTGCCACCATTGAGGGAT 60.034 55.000 0.00 0.00 43.89 3.85
2451 2545 1.379916 CACTGCCACCATTGAGGGA 59.620 57.895 0.00 0.00 43.89 4.20
2452 2546 1.679977 CCACTGCCACCATTGAGGG 60.680 63.158 0.00 0.00 43.89 4.30
2453 2547 0.962356 GACCACTGCCACCATTGAGG 60.962 60.000 0.00 0.00 45.67 3.86
2454 2548 0.962356 GGACCACTGCCACCATTGAG 60.962 60.000 0.00 0.00 0.00 3.02
2455 2549 1.074775 GGACCACTGCCACCATTGA 59.925 57.895 0.00 0.00 0.00 2.57
2456 2550 1.978617 GGGACCACTGCCACCATTG 60.979 63.158 0.00 0.00 0.00 2.82
2457 2551 1.729267 AAGGGACCACTGCCACCATT 61.729 55.000 0.00 0.00 0.00 3.16
2458 2552 1.729267 AAAGGGACCACTGCCACCAT 61.729 55.000 0.00 0.00 0.00 3.55
2459 2553 1.943730 AAAAGGGACCACTGCCACCA 61.944 55.000 0.00 0.00 0.00 4.17
2460 2554 1.152546 AAAAGGGACCACTGCCACC 60.153 57.895 0.00 0.00 0.00 4.61
2461 2555 0.178990 AGAAAAGGGACCACTGCCAC 60.179 55.000 0.00 0.00 0.00 5.01
2462 2556 1.351017 CTAGAAAAGGGACCACTGCCA 59.649 52.381 0.00 0.00 0.00 4.92
2463 2557 1.351350 ACTAGAAAAGGGACCACTGCC 59.649 52.381 0.00 0.00 0.00 4.85
2464 2558 2.615747 GGACTAGAAAAGGGACCACTGC 60.616 54.545 0.00 0.00 0.00 4.40
2465 2559 2.353803 CGGACTAGAAAAGGGACCACTG 60.354 54.545 0.00 0.00 0.00 3.66
2466 2560 1.900486 CGGACTAGAAAAGGGACCACT 59.100 52.381 0.00 0.00 0.00 4.00
2467 2561 1.622312 ACGGACTAGAAAAGGGACCAC 59.378 52.381 0.00 0.00 0.00 4.16
2468 2562 1.897802 GACGGACTAGAAAAGGGACCA 59.102 52.381 0.00 0.00 0.00 4.02
2469 2563 1.897802 TGACGGACTAGAAAAGGGACC 59.102 52.381 0.00 0.00 0.00 4.46
2470 2564 3.194968 TGATGACGGACTAGAAAAGGGAC 59.805 47.826 0.00 0.00 0.00 4.46
2471 2565 3.194968 GTGATGACGGACTAGAAAAGGGA 59.805 47.826 0.00 0.00 0.00 4.20
2472 2566 3.195825 AGTGATGACGGACTAGAAAAGGG 59.804 47.826 0.00 0.00 0.00 3.95
2473 2567 4.457834 AGTGATGACGGACTAGAAAAGG 57.542 45.455 0.00 0.00 0.00 3.11
2474 2568 6.197364 ACTAGTGATGACGGACTAGAAAAG 57.803 41.667 12.06 0.00 42.96 2.27
2475 2569 6.433404 AGAACTAGTGATGACGGACTAGAAAA 59.567 38.462 12.06 0.00 42.96 2.29
2476 2570 5.944599 AGAACTAGTGATGACGGACTAGAAA 59.055 40.000 12.06 0.00 42.96 2.52
2477 2571 5.498393 AGAACTAGTGATGACGGACTAGAA 58.502 41.667 12.06 0.00 42.96 2.10
2478 2572 5.100344 AGAACTAGTGATGACGGACTAGA 57.900 43.478 12.06 0.00 42.96 2.43
2479 2573 5.821516 AAGAACTAGTGATGACGGACTAG 57.178 43.478 0.00 0.00 44.92 2.57
2480 2574 6.585695 AAAAGAACTAGTGATGACGGACTA 57.414 37.500 0.00 0.00 0.00 2.59
2481 2575 5.470047 AAAAGAACTAGTGATGACGGACT 57.530 39.130 0.00 0.00 0.00 3.85
2501 2595 4.202770 TGGGAGGGATCAATGGAAGAAAAA 60.203 41.667 0.00 0.00 0.00 1.94
2502 2596 3.336391 TGGGAGGGATCAATGGAAGAAAA 59.664 43.478 0.00 0.00 0.00 2.29
2503 2597 2.925653 TGGGAGGGATCAATGGAAGAAA 59.074 45.455 0.00 0.00 0.00 2.52
2504 2598 2.511218 CTGGGAGGGATCAATGGAAGAA 59.489 50.000 0.00 0.00 0.00 2.52
2505 2599 2.130193 CTGGGAGGGATCAATGGAAGA 58.870 52.381 0.00 0.00 0.00 2.87
2506 2600 1.478288 GCTGGGAGGGATCAATGGAAG 60.478 57.143 0.00 0.00 0.00 3.46
2507 2601 0.552848 GCTGGGAGGGATCAATGGAA 59.447 55.000 0.00 0.00 0.00 3.53
2508 2602 0.624206 TGCTGGGAGGGATCAATGGA 60.624 55.000 0.00 0.00 0.00 3.41
2509 2603 0.259647 TTGCTGGGAGGGATCAATGG 59.740 55.000 0.00 0.00 0.00 3.16
2510 2604 2.148446 TTTGCTGGGAGGGATCAATG 57.852 50.000 0.00 0.00 0.00 2.82
2511 2605 2.925966 TTTTGCTGGGAGGGATCAAT 57.074 45.000 0.00 0.00 0.00 2.57
2512 2606 2.692709 TTTTTGCTGGGAGGGATCAA 57.307 45.000 0.00 0.00 0.00 2.57
2530 2624 4.397417 GCTCTCCATGATAGTGTGCTTTTT 59.603 41.667 0.00 0.00 0.00 1.94
2531 2625 3.944015 GCTCTCCATGATAGTGTGCTTTT 59.056 43.478 0.00 0.00 0.00 2.27
2532 2626 3.054875 TGCTCTCCATGATAGTGTGCTTT 60.055 43.478 0.00 0.00 0.00 3.51
2533 2627 2.502947 TGCTCTCCATGATAGTGTGCTT 59.497 45.455 0.00 0.00 0.00 3.91
2534 2628 2.113807 TGCTCTCCATGATAGTGTGCT 58.886 47.619 0.00 0.00 0.00 4.40
2535 2629 2.609427 TGCTCTCCATGATAGTGTGC 57.391 50.000 0.00 0.00 0.00 4.57
2536 2630 4.940046 AGTTTTGCTCTCCATGATAGTGTG 59.060 41.667 0.00 0.00 0.00 3.82
2537 2631 5.171339 AGTTTTGCTCTCCATGATAGTGT 57.829 39.130 0.00 0.00 0.00 3.55
2538 2632 5.163683 CCAAGTTTTGCTCTCCATGATAGTG 60.164 44.000 0.00 0.00 0.00 2.74
2539 2633 4.946157 CCAAGTTTTGCTCTCCATGATAGT 59.054 41.667 0.00 0.00 0.00 2.12
2540 2634 4.201990 GCCAAGTTTTGCTCTCCATGATAG 60.202 45.833 0.00 0.00 0.00 2.08
2541 2635 3.696051 GCCAAGTTTTGCTCTCCATGATA 59.304 43.478 0.00 0.00 0.00 2.15
2542 2636 2.494870 GCCAAGTTTTGCTCTCCATGAT 59.505 45.455 0.00 0.00 0.00 2.45
2543 2637 1.888512 GCCAAGTTTTGCTCTCCATGA 59.111 47.619 0.00 0.00 0.00 3.07
2544 2638 1.891150 AGCCAAGTTTTGCTCTCCATG 59.109 47.619 0.00 0.00 30.33 3.66
2545 2639 2.299326 AGCCAAGTTTTGCTCTCCAT 57.701 45.000 0.00 0.00 30.33 3.41
2546 2640 3.827505 AGCCAAGTTTTGCTCTCCA 57.172 47.368 0.00 0.00 30.33 3.86
2551 2645 0.465460 TGACCGAGCCAAGTTTTGCT 60.465 50.000 0.00 0.00 41.42 3.91
2552 2646 0.317854 GTGACCGAGCCAAGTTTTGC 60.318 55.000 0.00 0.00 0.00 3.68
2553 2647 0.310854 GGTGACCGAGCCAAGTTTTG 59.689 55.000 0.00 0.00 0.00 2.44
2554 2648 0.106918 TGGTGACCGAGCCAAGTTTT 60.107 50.000 0.00 0.00 0.00 2.43
2555 2649 0.818040 GTGGTGACCGAGCCAAGTTT 60.818 55.000 0.00 0.00 36.41 2.66
2556 2650 1.227853 GTGGTGACCGAGCCAAGTT 60.228 57.895 0.00 0.00 36.41 2.66
2557 2651 1.696097 AAGTGGTGACCGAGCCAAGT 61.696 55.000 0.00 0.00 36.41 3.16
2558 2652 0.535102 AAAGTGGTGACCGAGCCAAG 60.535 55.000 0.00 0.00 36.41 3.61
2559 2653 0.106918 AAAAGTGGTGACCGAGCCAA 60.107 50.000 0.00 0.00 36.41 4.52
2560 2654 0.817634 CAAAAGTGGTGACCGAGCCA 60.818 55.000 0.00 0.00 0.00 4.75
2561 2655 0.818040 ACAAAAGTGGTGACCGAGCC 60.818 55.000 0.00 0.00 0.00 4.70
2562 2656 0.586802 GACAAAAGTGGTGACCGAGC 59.413 55.000 0.00 0.00 0.00 5.03
2563 2657 1.867233 CTGACAAAAGTGGTGACCGAG 59.133 52.381 0.00 0.00 0.00 4.63
2564 2658 1.208535 ACTGACAAAAGTGGTGACCGA 59.791 47.619 0.00 0.00 0.00 4.69
2565 2659 1.330521 CACTGACAAAAGTGGTGACCG 59.669 52.381 0.00 0.00 43.22 4.79
2566 2660 2.614057 CTCACTGACAAAAGTGGTGACC 59.386 50.000 0.00 0.00 46.27 4.02
2567 2661 2.614057 CCTCACTGACAAAAGTGGTGAC 59.386 50.000 4.63 0.00 46.27 3.67
2568 2662 2.503765 TCCTCACTGACAAAAGTGGTGA 59.496 45.455 4.63 0.00 46.27 4.02
2569 2663 2.917933 TCCTCACTGACAAAAGTGGTG 58.082 47.619 4.63 0.00 46.27 4.17
2570 2664 3.279434 GTTCCTCACTGACAAAAGTGGT 58.721 45.455 4.63 0.00 46.27 4.16
2571 2665 2.618709 GGTTCCTCACTGACAAAAGTGG 59.381 50.000 4.63 0.00 46.27 4.00
2573 2667 2.561569 CGGTTCCTCACTGACAAAAGT 58.438 47.619 0.00 0.00 32.74 2.66
2574 2668 1.873591 CCGGTTCCTCACTGACAAAAG 59.126 52.381 0.00 0.00 32.74 2.27
2575 2669 1.476110 CCCGGTTCCTCACTGACAAAA 60.476 52.381 0.00 0.00 32.74 2.44
2576 2670 0.107831 CCCGGTTCCTCACTGACAAA 59.892 55.000 0.00 0.00 32.74 2.83
2577 2671 1.752198 CCCGGTTCCTCACTGACAA 59.248 57.895 0.00 0.00 32.74 3.18
2578 2672 2.879233 GCCCGGTTCCTCACTGACA 61.879 63.158 0.00 0.00 32.74 3.58
2579 2673 2.047179 GCCCGGTTCCTCACTGAC 60.047 66.667 0.00 0.00 32.74 3.51
2580 2674 2.203788 AGCCCGGTTCCTCACTGA 60.204 61.111 0.00 0.00 32.74 3.41
2581 2675 2.266055 GAGCCCGGTTCCTCACTG 59.734 66.667 0.00 0.00 0.00 3.66
2582 2676 3.003763 GGAGCCCGGTTCCTCACT 61.004 66.667 12.98 0.00 30.11 3.41
2583 2677 3.003763 AGGAGCCCGGTTCCTCAC 61.004 66.667 16.89 6.65 38.96 3.51
2586 2680 2.685380 CAGAGGAGCCCGGTTCCT 60.685 66.667 22.15 22.15 45.73 3.36
2587 2681 4.475135 GCAGAGGAGCCCGGTTCC 62.475 72.222 12.37 12.37 32.98 3.62
2588 2682 3.254024 TTGCAGAGGAGCCCGGTTC 62.254 63.158 0.00 0.00 0.00 3.62
2589 2683 3.249189 TTGCAGAGGAGCCCGGTT 61.249 61.111 0.00 0.00 0.00 4.44
2590 2684 3.710722 CTTGCAGAGGAGCCCGGT 61.711 66.667 0.00 0.00 0.00 5.28
2591 2685 3.382803 CTCTTGCAGAGGAGCCCGG 62.383 68.421 0.00 0.00 38.67 5.73
2592 2686 2.186384 CTCTTGCAGAGGAGCCCG 59.814 66.667 5.54 0.00 38.67 6.13
2593 2687 2.124778 GCTCTTGCAGAGGAGCCC 60.125 66.667 20.42 2.73 46.32 5.19
2604 2698 1.934220 TAGAGGCGGACGTGCTCTTG 61.934 60.000 5.27 0.00 34.52 3.02
2605 2699 1.677966 TAGAGGCGGACGTGCTCTT 60.678 57.895 5.27 0.00 34.52 2.85
2606 2700 2.045242 TAGAGGCGGACGTGCTCT 60.045 61.111 5.27 3.95 34.52 4.09
2607 2701 2.102553 GTAGAGGCGGACGTGCTC 59.897 66.667 5.27 0.00 34.52 4.26
2608 2702 2.214181 CTTGTAGAGGCGGACGTGCT 62.214 60.000 5.27 0.00 34.52 4.40
2609 2703 1.805945 CTTGTAGAGGCGGACGTGC 60.806 63.158 0.00 0.00 0.00 5.34
2610 2704 1.805945 GCTTGTAGAGGCGGACGTG 60.806 63.158 0.00 0.00 0.00 4.49
2611 2705 2.214181 CTGCTTGTAGAGGCGGACGT 62.214 60.000 0.00 0.00 37.02 4.34
2612 2706 1.517257 CTGCTTGTAGAGGCGGACG 60.517 63.158 0.00 0.00 37.02 4.79
2613 2707 1.811679 GCTGCTTGTAGAGGCGGAC 60.812 63.158 7.02 0.00 37.02 4.79
2614 2708 2.282783 TGCTGCTTGTAGAGGCGGA 61.283 57.895 7.02 0.00 37.02 5.54
2615 2709 2.103042 GTGCTGCTTGTAGAGGCGG 61.103 63.158 0.00 0.00 37.83 6.13
2616 2710 2.103042 GGTGCTGCTTGTAGAGGCG 61.103 63.158 0.00 0.00 0.00 5.52
2617 2711 0.322008 AAGGTGCTGCTTGTAGAGGC 60.322 55.000 0.00 0.00 0.00 4.70
2618 2712 2.191128 AAAGGTGCTGCTTGTAGAGG 57.809 50.000 0.00 0.00 0.00 3.69
2619 2713 3.549299 CAAAAGGTGCTGCTTGTAGAG 57.451 47.619 0.00 0.00 0.00 2.43
2631 2725 4.046462 CAGTTCAACTCATGCAAAAGGTG 58.954 43.478 9.82 9.82 0.00 4.00
2632 2726 3.953612 TCAGTTCAACTCATGCAAAAGGT 59.046 39.130 0.00 0.00 0.00 3.50
2633 2727 4.037208 AGTCAGTTCAACTCATGCAAAAGG 59.963 41.667 0.00 0.00 0.00 3.11
2634 2728 5.179045 AGTCAGTTCAACTCATGCAAAAG 57.821 39.130 0.00 0.00 0.00 2.27
2635 2729 5.588246 TGTAGTCAGTTCAACTCATGCAAAA 59.412 36.000 0.00 0.00 0.00 2.44
2636 2730 5.007626 GTGTAGTCAGTTCAACTCATGCAAA 59.992 40.000 0.00 0.00 0.00 3.68
2637 2731 4.511454 GTGTAGTCAGTTCAACTCATGCAA 59.489 41.667 0.00 0.00 0.00 4.08
2638 2732 4.058124 GTGTAGTCAGTTCAACTCATGCA 58.942 43.478 0.00 0.00 0.00 3.96
2639 2733 3.433615 GGTGTAGTCAGTTCAACTCATGC 59.566 47.826 0.00 0.00 0.00 4.06
2640 2734 3.675225 CGGTGTAGTCAGTTCAACTCATG 59.325 47.826 0.00 0.00 0.00 3.07
2641 2735 3.572682 TCGGTGTAGTCAGTTCAACTCAT 59.427 43.478 0.00 0.00 0.00 2.90
2642 2736 2.953648 TCGGTGTAGTCAGTTCAACTCA 59.046 45.455 0.00 0.00 0.00 3.41
2643 2737 3.637998 TCGGTGTAGTCAGTTCAACTC 57.362 47.619 0.00 0.00 0.00 3.01
2644 2738 3.321111 ACATCGGTGTAGTCAGTTCAACT 59.679 43.478 0.00 0.00 36.63 3.16
2645 2739 3.428870 CACATCGGTGTAGTCAGTTCAAC 59.571 47.826 0.00 0.00 40.24 3.18
2646 2740 3.554129 CCACATCGGTGTAGTCAGTTCAA 60.554 47.826 0.00 0.00 43.71 2.69
2647 2741 2.029380 CCACATCGGTGTAGTCAGTTCA 60.029 50.000 0.00 0.00 43.71 3.18
2648 2742 2.607187 CCACATCGGTGTAGTCAGTTC 58.393 52.381 0.00 0.00 43.71 3.01
2649 2743 2.743636 CCACATCGGTGTAGTCAGTT 57.256 50.000 0.00 0.00 43.71 3.16
2660 2754 2.505982 CCCCAGCTACCACATCGG 59.494 66.667 0.00 0.00 42.50 4.18
2661 2755 2.203070 GCCCCAGCTACCACATCG 60.203 66.667 0.00 0.00 35.50 3.84
2662 2756 1.452108 GTGCCCCAGCTACCACATC 60.452 63.158 0.00 0.00 40.80 3.06
2663 2757 2.677228 GTGCCCCAGCTACCACAT 59.323 61.111 0.00 0.00 40.80 3.21
2664 2758 3.646715 GGTGCCCCAGCTACCACA 61.647 66.667 0.00 0.00 38.96 4.17
2665 2759 4.426313 GGGTGCCCCAGCTACCAC 62.426 72.222 5.02 1.53 44.65 4.16
2668 2762 4.468689 GACGGGTGCCCCAGCTAC 62.469 72.222 10.47 0.00 45.83 3.58
2676 2770 3.323758 TACATGCTGGACGGGTGCC 62.324 63.158 0.00 0.00 0.00 5.01
2677 2771 1.815421 CTACATGCTGGACGGGTGC 60.815 63.158 0.00 0.00 0.00 5.01
2678 2772 1.815421 GCTACATGCTGGACGGGTG 60.815 63.158 0.00 0.00 38.95 4.61
2679 2773 2.584608 GCTACATGCTGGACGGGT 59.415 61.111 0.00 0.00 38.95 5.28
2680 2774 2.586079 CGCTACATGCTGGACGGG 60.586 66.667 0.00 0.00 40.11 5.28
2681 2775 3.264897 GCGCTACATGCTGGACGG 61.265 66.667 0.00 0.00 40.11 4.79
2682 2776 2.202797 AGCGCTACATGCTGGACG 60.203 61.111 8.99 0.00 42.14 4.79
2687 2781 0.812811 CATGTCCAGCGCTACATGCT 60.813 55.000 30.22 9.21 44.52 3.79
2688 2782 1.645455 CATGTCCAGCGCTACATGC 59.355 57.895 30.22 13.14 44.52 4.06
2690 2784 1.524621 GGCATGTCCAGCGCTACAT 60.525 57.895 18.02 18.02 36.78 2.29
2691 2785 2.125147 GGCATGTCCAGCGCTACA 60.125 61.111 10.99 13.42 34.01 2.74
2692 2786 2.897350 GGGCATGTCCAGCGCTAC 60.897 66.667 12.68 6.46 41.20 3.58
2695 2789 2.124736 TTAGGGCATGTCCAGCGC 60.125 61.111 20.74 0.00 44.31 5.92
2696 2790 1.524621 CCTTAGGGCATGTCCAGCG 60.525 63.158 20.74 5.44 36.21 5.18
2697 2791 1.152881 CCCTTAGGGCATGTCCAGC 60.153 63.158 20.74 0.00 35.35 4.85
2714 2808 4.176752 GTCACGGATGGGAGGGCC 62.177 72.222 0.00 0.00 0.00 5.80
2715 2809 3.083997 AGTCACGGATGGGAGGGC 61.084 66.667 0.00 0.00 0.00 5.19
2716 2810 2.435693 GGAGTCACGGATGGGAGGG 61.436 68.421 0.00 0.00 0.00 4.30
2717 2811 1.264749 TTGGAGTCACGGATGGGAGG 61.265 60.000 0.00 0.00 0.00 4.30
2718 2812 0.176680 CTTGGAGTCACGGATGGGAG 59.823 60.000 0.00 0.00 0.00 4.30
2719 2813 1.899437 GCTTGGAGTCACGGATGGGA 61.899 60.000 0.00 0.00 0.00 4.37
2720 2814 1.450312 GCTTGGAGTCACGGATGGG 60.450 63.158 0.00 0.00 0.00 4.00
2769 2863 8.088388 CGAATTCTATATCGTCATTCGTAAACG 58.912 37.037 3.52 0.00 40.73 3.60
2803 2897 7.096885 CGAAGAAAAAGTACTGTTCATTTGCTG 60.097 37.037 17.46 0.00 0.00 4.41
2810 2904 5.064198 CCACACGAAGAAAAAGTACTGTTCA 59.936 40.000 17.46 0.00 0.00 3.18
2816 2910 3.955771 TGCCACACGAAGAAAAAGTAC 57.044 42.857 0.00 0.00 0.00 2.73
2819 2913 2.529894 CGTTTGCCACACGAAGAAAAAG 59.470 45.455 0.00 0.00 40.20 2.27
2830 2924 2.335316 AAGGACTAACGTTTGCCACA 57.665 45.000 5.91 0.00 0.00 4.17
2832 2926 5.427036 CTTAAAAGGACTAACGTTTGCCA 57.573 39.130 5.91 0.00 36.82 4.92
2925 3019 0.032678 AGGCGAAGATGGCATACGAG 59.967 55.000 19.75 6.72 36.77 4.18
2928 3022 5.294552 GGAATATTAGGCGAAGATGGCATAC 59.705 44.000 0.00 0.00 36.77 2.39


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.