Multiple sequence alignment - TraesCS4B01G037400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G037400 chr4B 100.000 4018 0 0 1 4018 27109920 27113937 0.000000e+00 7420.0
1 TraesCS4B01G037400 chr4B 82.719 1493 229 22 1545 3020 27125811 27127291 0.000000e+00 1301.0
2 TraesCS4B01G037400 chr4B 86.207 174 23 1 1116 1288 27123832 27124005 1.910000e-43 187.0
3 TraesCS4B01G037400 chr4D 91.560 2038 116 17 1538 3554 15788701 15790703 0.000000e+00 2760.0
4 TraesCS4B01G037400 chr4D 83.524 1487 213 20 1552 3020 15796189 15797661 0.000000e+00 1360.0
5 TraesCS4B01G037400 chr4D 84.669 574 41 17 832 1390 15787768 15788309 2.750000e-146 529.0
6 TraesCS4B01G037400 chr4D 84.813 428 29 9 1 407 15786392 15786804 8.090000e-107 398.0
7 TraesCS4B01G037400 chr4D 81.902 326 36 7 3651 3961 15790715 15791032 1.850000e-63 254.0
8 TraesCS4B01G037400 chr4D 79.868 303 40 15 3630 3927 15793068 15793354 6.810000e-48 202.0
9 TraesCS4B01G037400 chr4A 93.197 1514 75 11 1538 3050 584812434 584810948 0.000000e+00 2200.0
10 TraesCS4B01G037400 chr4A 84.985 646 53 19 873 1514 584813114 584812509 2.050000e-172 616.0
11 TraesCS4B01G037400 chr4A 85.779 443 37 9 1 424 584817908 584817473 2.850000e-121 446.0
12 TraesCS4B01G037400 chr4A 83.333 108 14 3 3402 3509 584810609 584810506 3.310000e-16 97.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G037400 chr4B 27109920 27113937 4017 False 7420.000000 7420 100.000000 1 4018 1 chr4B.!!$F1 4017
1 TraesCS4B01G037400 chr4B 27123832 27127291 3459 False 744.000000 1301 84.463000 1116 3020 2 chr4B.!!$F2 1904
2 TraesCS4B01G037400 chr4D 15786392 15797661 11269 False 917.166667 2760 84.389333 1 3961 6 chr4D.!!$F1 3960
3 TraesCS4B01G037400 chr4A 584810506 584813114 2608 True 971.033333 2200 87.171667 873 3509 3 chr4A.!!$R2 2636

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
866 1618 0.108585 TCGAGGCAGTTCAGGCTTTT 59.891 50.0 0.0 0.0 45.32 2.27 F
1306 2073 0.106217 CTCCCACTCTCTCCCTCTCC 60.106 65.0 0.0 0.0 0.00 3.71 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2811 5350 0.385390 AACCGTCAAGCCAAGCAAAG 59.615 50.0 0.0 0.0 0.0 2.77 R
3201 5870 0.601558 GTCTTCGTGGCTCCAGTGTA 59.398 55.0 0.0 0.0 0.0 2.90 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 2.054232 AATGCTCAGCTGGATCCTTG 57.946 50.000 15.13 9.05 0.00 3.61
35 36 5.188434 TGGATCCTTGCTTTTCTGATACAG 58.812 41.667 14.23 0.00 0.00 2.74
39 40 4.637534 TCCTTGCTTTTCTGATACAGATGC 59.362 41.667 2.30 8.13 40.39 3.91
75 76 2.545952 CGACGCTAATACCTGCCATTCT 60.546 50.000 0.00 0.00 0.00 2.40
81 85 4.505566 GCTAATACCTGCCATTCTGGATGA 60.506 45.833 0.00 0.00 40.96 2.92
92 96 5.105635 GCCATTCTGGATGACATTTTTGAGA 60.106 40.000 0.00 0.00 40.96 3.27
99 103 9.551734 TCTGGATGACATTTTTGAGATGTATAG 57.448 33.333 0.00 0.00 37.83 1.31
116 120 4.647853 TGTATAGCTGATCCGGTACTGTTT 59.352 41.667 0.00 0.00 0.00 2.83
118 122 1.623811 AGCTGATCCGGTACTGTTTGT 59.376 47.619 0.00 0.00 0.00 2.83
120 124 2.611971 GCTGATCCGGTACTGTTTGTGA 60.612 50.000 0.00 0.00 0.00 3.58
228 232 0.389817 AGCTAAACGTCGCTGATGCA 60.390 50.000 6.21 0.00 39.64 3.96
229 233 0.247301 GCTAAACGTCGCTGATGCAC 60.247 55.000 0.00 0.00 39.64 4.57
230 234 1.350193 CTAAACGTCGCTGATGCACT 58.650 50.000 0.00 0.00 39.64 4.40
231 235 2.526077 CTAAACGTCGCTGATGCACTA 58.474 47.619 0.00 0.00 39.64 2.74
232 236 1.790755 AAACGTCGCTGATGCACTAA 58.209 45.000 0.00 0.00 39.64 2.24
233 237 1.790755 AACGTCGCTGATGCACTAAA 58.209 45.000 0.00 0.00 39.64 1.85
234 238 2.010145 ACGTCGCTGATGCACTAAAT 57.990 45.000 0.00 0.00 39.64 1.40
235 239 2.346803 ACGTCGCTGATGCACTAAATT 58.653 42.857 0.00 0.00 39.64 1.82
236 240 2.348666 ACGTCGCTGATGCACTAAATTC 59.651 45.455 0.00 0.00 39.64 2.17
237 241 2.348362 CGTCGCTGATGCACTAAATTCA 59.652 45.455 0.00 0.00 39.64 2.57
238 242 3.001634 CGTCGCTGATGCACTAAATTCAT 59.998 43.478 0.00 0.00 39.64 2.57
239 243 4.521943 GTCGCTGATGCACTAAATTCATC 58.478 43.478 0.00 0.00 39.64 2.92
240 244 4.034394 GTCGCTGATGCACTAAATTCATCA 59.966 41.667 6.60 6.60 42.79 3.07
243 247 4.906065 TGATGCACTAAATTCATCAGGC 57.094 40.909 3.35 0.00 40.91 4.85
244 248 4.271661 TGATGCACTAAATTCATCAGGCA 58.728 39.130 3.35 0.00 40.91 4.75
266 270 6.347402 GGCAACGGCATATTATGTTGTAGTAG 60.347 42.308 5.60 0.00 42.71 2.57
270 274 5.235516 GGCATATTATGTTGTAGTAGCCGT 58.764 41.667 5.60 0.00 0.00 5.68
271 275 5.699458 GGCATATTATGTTGTAGTAGCCGTT 59.301 40.000 5.60 0.00 0.00 4.44
273 277 7.255001 GGCATATTATGTTGTAGTAGCCGTTTT 60.255 37.037 5.60 0.00 0.00 2.43
282 286 5.038683 TGTAGTAGCCGTTTTGATGATACG 58.961 41.667 0.00 0.00 35.20 3.06
290 294 5.025826 CCGTTTTGATGATACGCTTTTACC 58.974 41.667 0.00 0.00 34.16 2.85
294 298 6.417191 TTTGATGATACGCTTTTACCAGTC 57.583 37.500 0.00 0.00 0.00 3.51
295 299 4.439057 TGATGATACGCTTTTACCAGTCC 58.561 43.478 0.00 0.00 0.00 3.85
317 334 7.289084 AGTCCTGGTGGTATTTATGTTGTTTTT 59.711 33.333 0.00 0.00 34.23 1.94
337 359 8.812972 TGTTTTTACTGGATGTACTGAGATACT 58.187 33.333 0.00 0.00 0.00 2.12
348 370 9.553064 GATGTACTGAGATACTTGAATGGAAAT 57.447 33.333 0.00 0.00 0.00 2.17
361 383 9.617523 ACTTGAATGGAAATTTTTGATCTGTTT 57.382 25.926 0.00 0.00 0.00 2.83
376 398 2.543848 TCTGTTTTAAGCTGTGCTCACG 59.456 45.455 0.00 0.00 38.25 4.35
407 429 5.518812 TCGTGACCAAATCTGAATTTGTTG 58.481 37.500 9.34 0.00 46.87 3.33
408 430 4.681025 CGTGACCAAATCTGAATTTGTTGG 59.319 41.667 9.34 0.00 46.87 3.77
409 431 4.448732 GTGACCAAATCTGAATTTGTTGGC 59.551 41.667 9.34 0.00 46.87 4.52
411 433 2.995258 CCAAATCTGAATTTGTTGGCCG 59.005 45.455 0.00 0.00 46.87 6.13
416 438 0.387202 TGAATTTGTTGGCCGGTGTG 59.613 50.000 1.90 0.00 0.00 3.82
420 442 0.823769 TTTGTTGGCCGGTGTGCATA 60.824 50.000 1.90 0.00 0.00 3.14
424 446 0.538516 TTGGCCGGTGTGCATACTTT 60.539 50.000 13.64 0.00 0.00 2.66
425 447 0.538516 TGGCCGGTGTGCATACTTTT 60.539 50.000 13.64 0.00 0.00 2.27
453 532 1.132332 TCCTAGGGTCCTTTGTTCCCA 60.132 52.381 9.46 0.00 43.31 4.37
454 533 1.004394 CCTAGGGTCCTTTGTTCCCAC 59.996 57.143 0.00 0.00 43.31 4.61
455 534 1.985895 CTAGGGTCCTTTGTTCCCACT 59.014 52.381 0.00 0.00 43.31 4.00
457 536 1.179174 GGGTCCTTTGTTCCCACTGC 61.179 60.000 0.00 0.00 40.79 4.40
473 552 3.113547 CACTGCGTGAAAGCAATTTGCT 61.114 45.455 18.06 18.06 46.03 3.91
474 553 4.926732 CACTGCGTGAAAGCAATTTGCTC 61.927 47.826 23.35 13.13 44.36 4.26
486 565 4.741342 GCAATTTGCTCTGTTATTCTGCT 58.259 39.130 14.11 0.00 40.96 4.24
489 568 6.252228 GCAATTTGCTCTGTTATTCTGCTAAC 59.748 38.462 14.11 0.00 40.96 2.34
491 570 6.486253 TTTGCTCTGTTATTCTGCTAACTG 57.514 37.500 0.00 0.00 33.62 3.16
492 571 5.152623 TGCTCTGTTATTCTGCTAACTGT 57.847 39.130 0.00 0.00 34.21 3.55
495 574 6.152831 TGCTCTGTTATTCTGCTAACTGTCTA 59.847 38.462 0.00 0.00 34.21 2.59
496 575 6.695278 GCTCTGTTATTCTGCTAACTGTCTAG 59.305 42.308 0.00 0.00 34.21 2.43
497 576 7.415765 GCTCTGTTATTCTGCTAACTGTCTAGA 60.416 40.741 0.00 0.00 34.21 2.43
499 578 8.462811 TCTGTTATTCTGCTAACTGTCTAGAAG 58.537 37.037 0.00 0.00 34.21 2.85
501 580 8.803235 TGTTATTCTGCTAACTGTCTAGAAGAA 58.197 33.333 16.13 16.13 44.31 2.52
503 582 9.809096 TTATTCTGCTAACTGTCTAGAAGAATG 57.191 33.333 24.83 1.44 46.91 2.67
505 584 5.127845 TCTGCTAACTGTCTAGAAGAATGGG 59.872 44.000 0.00 0.00 31.60 4.00
507 586 5.248477 TGCTAACTGTCTAGAAGAATGGGTT 59.752 40.000 0.00 0.00 0.00 4.11
508 587 6.439375 TGCTAACTGTCTAGAAGAATGGGTTA 59.561 38.462 0.00 0.00 0.00 2.85
509 588 6.757478 GCTAACTGTCTAGAAGAATGGGTTAC 59.243 42.308 0.00 0.00 0.00 2.50
510 589 6.681729 AACTGTCTAGAAGAATGGGTTACA 57.318 37.500 0.00 0.00 0.00 2.41
511 590 6.287589 ACTGTCTAGAAGAATGGGTTACAG 57.712 41.667 0.00 0.00 38.18 2.74
512 591 6.017192 ACTGTCTAGAAGAATGGGTTACAGA 58.983 40.000 0.00 0.00 36.27 3.41
513 592 6.153680 ACTGTCTAGAAGAATGGGTTACAGAG 59.846 42.308 0.00 0.00 36.27 3.35
514 593 5.422331 TGTCTAGAAGAATGGGTTACAGAGG 59.578 44.000 0.00 0.00 0.00 3.69
515 594 3.636153 AGAAGAATGGGTTACAGAGGC 57.364 47.619 0.00 0.00 0.00 4.70
516 595 2.912956 AGAAGAATGGGTTACAGAGGCA 59.087 45.455 0.00 0.00 0.00 4.75
517 596 3.525199 AGAAGAATGGGTTACAGAGGCAT 59.475 43.478 0.00 0.00 0.00 4.40
518 597 4.018050 AGAAGAATGGGTTACAGAGGCATT 60.018 41.667 0.00 0.00 0.00 3.56
519 598 4.322057 AGAATGGGTTACAGAGGCATTT 57.678 40.909 0.00 0.00 0.00 2.32
520 599 4.677182 AGAATGGGTTACAGAGGCATTTT 58.323 39.130 0.00 0.00 0.00 1.82
523 602 3.153919 TGGGTTACAGAGGCATTTTGAC 58.846 45.455 0.00 0.00 0.00 3.18
527 606 4.229876 GTTACAGAGGCATTTTGACTTGC 58.770 43.478 0.00 0.00 34.53 4.01
540 619 9.615295 GCATTTTGACTTGCATTTCAAATAAAT 57.385 25.926 18.81 10.41 40.51 1.40
548 627 8.392612 ACTTGCATTTCAAATAAATATTGCTGC 58.607 29.630 0.00 0.00 33.65 5.25
549 628 6.935291 TGCATTTCAAATAAATATTGCTGCG 58.065 32.000 0.00 0.00 33.76 5.18
550 629 6.534436 TGCATTTCAAATAAATATTGCTGCGT 59.466 30.769 0.00 0.00 33.76 5.24
552 631 7.464444 GCATTTCAAATAAATATTGCTGCGTGT 60.464 33.333 0.00 0.00 0.00 4.49
553 632 6.867799 TTCAAATAAATATTGCTGCGTGTG 57.132 33.333 0.00 0.00 0.00 3.82
554 633 5.339177 TCAAATAAATATTGCTGCGTGTGG 58.661 37.500 0.00 0.00 0.00 4.17
555 634 4.981806 AATAAATATTGCTGCGTGTGGT 57.018 36.364 0.00 0.00 0.00 4.16
556 635 2.634982 AAATATTGCTGCGTGTGGTG 57.365 45.000 0.00 0.00 0.00 4.17
559 638 0.533978 TATTGCTGCGTGTGGTGTGT 60.534 50.000 0.00 0.00 0.00 3.72
560 639 1.785041 ATTGCTGCGTGTGGTGTGTC 61.785 55.000 0.00 0.00 0.00 3.67
561 640 2.588877 GCTGCGTGTGGTGTGTCT 60.589 61.111 0.00 0.00 0.00 3.41
562 641 2.180204 GCTGCGTGTGGTGTGTCTT 61.180 57.895 0.00 0.00 0.00 3.01
563 642 1.714899 GCTGCGTGTGGTGTGTCTTT 61.715 55.000 0.00 0.00 0.00 2.52
564 643 0.304705 CTGCGTGTGGTGTGTCTTTC 59.695 55.000 0.00 0.00 0.00 2.62
566 645 1.092921 GCGTGTGGTGTGTCTTTCCA 61.093 55.000 0.00 0.00 0.00 3.53
568 647 1.308998 GTGTGGTGTGTCTTTCCAGG 58.691 55.000 0.00 0.00 31.54 4.45
569 648 0.182537 TGTGGTGTGTCTTTCCAGGG 59.817 55.000 0.00 0.00 31.54 4.45
570 649 0.472471 GTGGTGTGTCTTTCCAGGGA 59.528 55.000 0.00 0.00 31.54 4.20
571 650 1.073923 GTGGTGTGTCTTTCCAGGGAT 59.926 52.381 0.00 0.00 31.54 3.85
572 651 1.780309 TGGTGTGTCTTTCCAGGGATT 59.220 47.619 0.00 0.00 0.00 3.01
573 652 2.983192 TGGTGTGTCTTTCCAGGGATTA 59.017 45.455 0.00 0.00 0.00 1.75
574 653 3.591527 TGGTGTGTCTTTCCAGGGATTAT 59.408 43.478 0.00 0.00 0.00 1.28
575 654 4.200092 GGTGTGTCTTTCCAGGGATTATC 58.800 47.826 0.00 0.00 0.00 1.75
576 655 4.200092 GTGTGTCTTTCCAGGGATTATCC 58.800 47.826 1.91 1.91 35.23 2.59
577 656 4.080299 GTGTGTCTTTCCAGGGATTATCCT 60.080 45.833 11.40 0.00 36.57 3.24
579 658 3.388024 TGTCTTTCCAGGGATTATCCTCG 59.612 47.826 11.40 2.57 36.57 4.63
581 660 4.587684 GTCTTTCCAGGGATTATCCTCGTA 59.412 45.833 11.40 0.00 36.57 3.43
583 662 6.436532 GTCTTTCCAGGGATTATCCTCGTATA 59.563 42.308 11.40 0.00 36.57 1.47
584 663 7.124448 GTCTTTCCAGGGATTATCCTCGTATAT 59.876 40.741 11.40 0.00 36.57 0.86
585 664 8.341513 TCTTTCCAGGGATTATCCTCGTATATA 58.658 37.037 11.40 0.00 36.57 0.86
586 665 8.904648 TTTCCAGGGATTATCCTCGTATATAA 57.095 34.615 11.40 0.00 36.57 0.98
588 667 7.879558 TCCAGGGATTATCCTCGTATATAAGA 58.120 38.462 11.40 0.00 36.57 2.10
589 668 8.341513 TCCAGGGATTATCCTCGTATATAAGAA 58.658 37.037 11.40 0.00 36.57 2.52
629 1155 8.665643 TTCAGATGAAAAATTGCAAAGTCAAT 57.334 26.923 1.71 0.00 38.23 2.57
630 1156 9.761504 TTCAGATGAAAAATTGCAAAGTCAATA 57.238 25.926 1.71 0.00 35.77 1.90
631 1157 9.414295 TCAGATGAAAAATTGCAAAGTCAATAG 57.586 29.630 1.71 0.15 35.77 1.73
632 1158 9.199982 CAGATGAAAAATTGCAAAGTCAATAGT 57.800 29.630 1.71 0.00 35.77 2.12
633 1159 9.768662 AGATGAAAAATTGCAAAGTCAATAGTT 57.231 25.926 1.71 0.00 35.77 2.24
643 1169 8.810652 TGCAAAGTCAATAGTTATTTGAAACC 57.189 30.769 0.00 0.00 33.69 3.27
645 1171 9.476202 GCAAAGTCAATAGTTATTTGAAACCTT 57.524 29.630 0.00 0.00 33.69 3.50
648 1174 8.934023 AGTCAATAGTTATTTGAAACCTTGGA 57.066 30.769 0.00 0.00 0.00 3.53
649 1175 8.793592 AGTCAATAGTTATTTGAAACCTTGGAC 58.206 33.333 0.00 0.00 0.00 4.02
651 1177 8.792633 TCAATAGTTATTTGAAACCTTGGACAG 58.207 33.333 0.00 0.00 0.00 3.51
652 1178 8.576442 CAATAGTTATTTGAAACCTTGGACAGT 58.424 33.333 0.00 0.00 0.00 3.55
653 1179 8.706322 ATAGTTATTTGAAACCTTGGACAGTT 57.294 30.769 0.00 0.00 0.00 3.16
654 1180 7.039313 AGTTATTTGAAACCTTGGACAGTTC 57.961 36.000 0.00 0.00 0.00 3.01
656 1182 4.981806 TTTGAAACCTTGGACAGTTCAG 57.018 40.909 0.00 0.00 0.00 3.02
658 1184 3.541632 TGAAACCTTGGACAGTTCAGAC 58.458 45.455 0.00 0.00 0.00 3.51
659 1185 3.199946 TGAAACCTTGGACAGTTCAGACT 59.800 43.478 0.00 0.00 36.25 3.24
660 1186 3.933861 AACCTTGGACAGTTCAGACTT 57.066 42.857 0.00 0.00 32.54 3.01
661 1187 3.933861 ACCTTGGACAGTTCAGACTTT 57.066 42.857 0.00 0.00 32.54 2.66
687 1439 7.780008 TTTATTTGAAACTCGAGACAGTTCA 57.220 32.000 21.68 18.08 35.45 3.18
688 1440 5.914085 ATTTGAAACTCGAGACAGTTCAG 57.086 39.130 21.68 0.00 35.45 3.02
689 1441 3.371102 TGAAACTCGAGACAGTTCAGG 57.629 47.619 21.68 0.00 35.45 3.86
690 1442 2.062519 GAAACTCGAGACAGTTCAGGC 58.937 52.381 21.68 0.00 35.45 4.85
691 1443 1.333177 AACTCGAGACAGTTCAGGCT 58.667 50.000 21.68 0.00 30.25 4.58
692 1444 1.333177 ACTCGAGACAGTTCAGGCTT 58.667 50.000 21.68 0.00 0.00 4.35
693 1445 1.689273 ACTCGAGACAGTTCAGGCTTT 59.311 47.619 21.68 0.00 0.00 3.51
694 1446 2.288518 ACTCGAGACAGTTCAGGCTTTC 60.289 50.000 21.68 0.00 0.00 2.62
695 1447 1.964223 TCGAGACAGTTCAGGCTTTCT 59.036 47.619 0.00 0.00 0.00 2.52
696 1448 2.365617 TCGAGACAGTTCAGGCTTTCTT 59.634 45.455 0.00 0.00 0.00 2.52
697 1449 3.134458 CGAGACAGTTCAGGCTTTCTTT 58.866 45.455 0.00 0.00 0.00 2.52
698 1450 3.561725 CGAGACAGTTCAGGCTTTCTTTT 59.438 43.478 0.00 0.00 0.00 2.27
699 1451 4.553547 CGAGACAGTTCAGGCTTTCTTTTG 60.554 45.833 0.00 0.00 0.00 2.44
700 1452 4.526970 AGACAGTTCAGGCTTTCTTTTGA 58.473 39.130 0.00 0.00 0.00 2.69
701 1453 4.949856 AGACAGTTCAGGCTTTCTTTTGAA 59.050 37.500 0.00 0.00 36.52 2.69
702 1454 5.418840 AGACAGTTCAGGCTTTCTTTTGAAA 59.581 36.000 0.00 0.00 45.20 2.69
703 1455 5.410924 ACAGTTCAGGCTTTCTTTTGAAAC 58.589 37.500 0.00 0.00 42.84 2.78
704 1456 4.805719 CAGTTCAGGCTTTCTTTTGAAACC 59.194 41.667 0.00 0.00 42.84 3.27
705 1457 4.711846 AGTTCAGGCTTTCTTTTGAAACCT 59.288 37.500 0.00 0.00 43.73 3.50
706 1458 5.187772 AGTTCAGGCTTTCTTTTGAAACCTT 59.812 36.000 0.00 0.00 42.45 3.50
707 1459 6.379988 AGTTCAGGCTTTCTTTTGAAACCTTA 59.620 34.615 0.00 0.00 42.45 2.69
708 1460 6.391227 TCAGGCTTTCTTTTGAAACCTTAG 57.609 37.500 0.00 0.00 42.45 2.18
709 1461 6.126409 TCAGGCTTTCTTTTGAAACCTTAGA 58.874 36.000 0.00 0.00 42.45 2.10
710 1462 6.039382 TCAGGCTTTCTTTTGAAACCTTAGAC 59.961 38.462 0.00 0.00 42.45 2.59
711 1463 5.891551 AGGCTTTCTTTTGAAACCTTAGACA 59.108 36.000 0.00 0.00 42.08 3.41
712 1464 6.379988 AGGCTTTCTTTTGAAACCTTAGACAA 59.620 34.615 0.00 0.00 42.08 3.18
713 1465 7.069950 AGGCTTTCTTTTGAAACCTTAGACAAT 59.930 33.333 0.00 0.00 42.08 2.71
714 1466 7.710907 GGCTTTCTTTTGAAACCTTAGACAATT 59.289 33.333 0.00 0.00 42.84 2.32
715 1467 8.755941 GCTTTCTTTTGAAACCTTAGACAATTC 58.244 33.333 0.00 0.00 42.84 2.17
716 1468 9.801873 CTTTCTTTTGAAACCTTAGACAATTCA 57.198 29.630 0.00 0.00 42.84 2.57
717 1469 9.801873 TTTCTTTTGAAACCTTAGACAATTCAG 57.198 29.630 0.00 0.00 42.84 3.02
718 1470 8.746052 TCTTTTGAAACCTTAGACAATTCAGA 57.254 30.769 0.00 0.00 32.21 3.27
719 1471 9.354673 TCTTTTGAAACCTTAGACAATTCAGAT 57.645 29.630 0.00 0.00 32.21 2.90
799 1551 6.749923 ATCAAGCTTTAGACAATTCAGACC 57.250 37.500 0.00 0.00 0.00 3.85
800 1552 5.869579 TCAAGCTTTAGACAATTCAGACCT 58.130 37.500 0.00 0.00 0.00 3.85
826 1578 4.732285 TTGAAACTCGAGACAATTCAGC 57.268 40.909 21.68 0.00 32.21 4.26
827 1579 3.067106 TGAAACTCGAGACAATTCAGCC 58.933 45.455 21.68 0.00 0.00 4.85
828 1580 2.100605 AACTCGAGACAATTCAGCCC 57.899 50.000 21.68 0.00 0.00 5.19
829 1581 0.250513 ACTCGAGACAATTCAGCCCC 59.749 55.000 21.68 0.00 0.00 5.80
830 1582 0.462759 CTCGAGACAATTCAGCCCCC 60.463 60.000 6.58 0.00 0.00 5.40
858 1610 4.806342 TTTTTGTAACTCGAGGCAGTTC 57.194 40.909 18.41 1.72 37.75 3.01
859 1611 3.462483 TTTGTAACTCGAGGCAGTTCA 57.538 42.857 18.41 4.33 37.75 3.18
860 1612 2.724977 TGTAACTCGAGGCAGTTCAG 57.275 50.000 18.41 0.00 37.75 3.02
861 1613 1.272490 TGTAACTCGAGGCAGTTCAGG 59.728 52.381 18.41 0.00 37.75 3.86
862 1614 0.246635 TAACTCGAGGCAGTTCAGGC 59.753 55.000 18.41 0.00 37.75 4.85
864 1616 1.294780 CTCGAGGCAGTTCAGGCTT 59.705 57.895 3.91 0.00 45.32 4.35
865 1617 0.321122 CTCGAGGCAGTTCAGGCTTT 60.321 55.000 3.91 0.00 45.32 3.51
866 1618 0.108585 TCGAGGCAGTTCAGGCTTTT 59.891 50.000 0.00 0.00 45.32 2.27
867 1619 0.954452 CGAGGCAGTTCAGGCTTTTT 59.046 50.000 0.00 0.00 45.32 1.94
868 1620 1.068954 CGAGGCAGTTCAGGCTTTTTC 60.069 52.381 0.00 0.00 45.32 2.29
869 1621 1.956477 GAGGCAGTTCAGGCTTTTTCA 59.044 47.619 0.00 0.00 45.32 2.69
870 1622 2.560105 GAGGCAGTTCAGGCTTTTTCAT 59.440 45.455 0.00 0.00 45.32 2.57
871 1623 2.298163 AGGCAGTTCAGGCTTTTTCATG 59.702 45.455 0.00 0.00 42.35 3.07
877 1629 6.044682 CAGTTCAGGCTTTTTCATGAAACTT 58.955 36.000 20.35 3.37 33.74 2.66
891 1643 7.991084 TCATGAAACTTGAGACAATTCAGAT 57.009 32.000 0.00 0.00 33.91 2.90
893 1645 8.853126 TCATGAAACTTGAGACAATTCAGATTT 58.147 29.630 0.00 0.00 33.91 2.17
895 1647 7.651808 TGAAACTTGAGACAATTCAGATTTCC 58.348 34.615 0.00 0.00 34.80 3.13
926 1681 3.912907 AGAGGGGATAACGGCGCG 61.913 66.667 6.90 0.00 0.00 6.86
957 1712 1.204704 TCGCATTCAACCTGATCGTCT 59.795 47.619 0.00 0.00 0.00 4.18
959 1714 2.416547 CGCATTCAACCTGATCGTCTTT 59.583 45.455 0.00 0.00 0.00 2.52
964 1719 2.637872 TCAACCTGATCGTCTTTTCCCT 59.362 45.455 0.00 0.00 0.00 4.20
965 1720 3.003480 CAACCTGATCGTCTTTTCCCTC 58.997 50.000 0.00 0.00 0.00 4.30
968 1723 2.622436 CTGATCGTCTTTTCCCTCCAC 58.378 52.381 0.00 0.00 0.00 4.02
969 1724 1.974957 TGATCGTCTTTTCCCTCCACA 59.025 47.619 0.00 0.00 0.00 4.17
970 1725 2.370519 TGATCGTCTTTTCCCTCCACAA 59.629 45.455 0.00 0.00 0.00 3.33
971 1726 2.249844 TCGTCTTTTCCCTCCACAAC 57.750 50.000 0.00 0.00 0.00 3.32
972 1727 1.202722 TCGTCTTTTCCCTCCACAACC 60.203 52.381 0.00 0.00 0.00 3.77
973 1728 1.202770 CGTCTTTTCCCTCCACAACCT 60.203 52.381 0.00 0.00 0.00 3.50
974 1729 2.230660 GTCTTTTCCCTCCACAACCTG 58.769 52.381 0.00 0.00 0.00 4.00
975 1730 2.131854 TCTTTTCCCTCCACAACCTGA 58.868 47.619 0.00 0.00 0.00 3.86
976 1731 2.716424 TCTTTTCCCTCCACAACCTGAT 59.284 45.455 0.00 0.00 0.00 2.90
1059 1814 4.150454 CTCCTCCTCCTCCCCGCT 62.150 72.222 0.00 0.00 0.00 5.52
1306 2073 0.106217 CTCCCACTCTCTCCCTCTCC 60.106 65.000 0.00 0.00 0.00 3.71
1308 2075 1.700368 CCACTCTCTCCCTCTCCCA 59.300 63.158 0.00 0.00 0.00 4.37
1345 2119 4.157656 TCGTTGCTGCTTAATAATGCCTTT 59.842 37.500 0.00 0.00 0.00 3.11
1349 2123 5.410067 TGCTGCTTAATAATGCCTTTGTTC 58.590 37.500 0.00 0.00 0.00 3.18
1405 2179 3.997064 CTCTCCGGTCAAGCGCCAG 62.997 68.421 2.29 0.00 0.00 4.85
1420 2194 2.182537 CAGCCAGCGGAAATTGCC 59.817 61.111 0.00 0.00 0.00 4.52
1464 2238 0.523072 CGTGCAACCAGAAATGGGAG 59.477 55.000 0.00 0.00 0.00 4.30
1495 2776 6.492254 ACTTCGACCTGTTAAAAATGTTGTC 58.508 36.000 0.00 0.00 0.00 3.18
1502 2783 8.472007 ACCTGTTAAAAATGTTGTCAATCCTA 57.528 30.769 0.00 0.00 0.00 2.94
1503 2784 8.357402 ACCTGTTAAAAATGTTGTCAATCCTAC 58.643 33.333 0.00 0.00 0.00 3.18
1504 2785 8.356657 CCTGTTAAAAATGTTGTCAATCCTACA 58.643 33.333 0.00 0.00 0.00 2.74
1505 2786 9.912634 CTGTTAAAAATGTTGTCAATCCTACAT 57.087 29.630 0.00 0.00 32.89 2.29
1510 2791 6.530019 AATGTTGTCAATCCTACATTTCCC 57.470 37.500 0.00 0.00 37.82 3.97
1511 2792 5.255397 TGTTGTCAATCCTACATTTCCCT 57.745 39.130 0.00 0.00 0.00 4.20
1512 2793 6.381498 TGTTGTCAATCCTACATTTCCCTA 57.619 37.500 0.00 0.00 0.00 3.53
1513 2794 6.414732 TGTTGTCAATCCTACATTTCCCTAG 58.585 40.000 0.00 0.00 0.00 3.02
1516 2797 6.414732 TGTCAATCCTACATTTCCCTAGTTG 58.585 40.000 0.00 0.00 0.00 3.16
1517 2798 6.214615 TGTCAATCCTACATTTCCCTAGTTGA 59.785 38.462 0.00 0.00 0.00 3.18
1519 2800 4.755266 TCCTACATTTCCCTAGTTGAGC 57.245 45.455 0.00 0.00 0.00 4.26
1520 2801 4.101114 TCCTACATTTCCCTAGTTGAGCA 58.899 43.478 0.00 0.00 0.00 4.26
1521 2802 4.081087 TCCTACATTTCCCTAGTTGAGCAC 60.081 45.833 0.00 0.00 0.00 4.40
1522 2803 4.080863 CCTACATTTCCCTAGTTGAGCACT 60.081 45.833 0.00 0.00 39.87 4.40
1523 2804 3.944087 ACATTTCCCTAGTTGAGCACTC 58.056 45.455 0.00 0.00 36.88 3.51
1524 2805 3.584848 ACATTTCCCTAGTTGAGCACTCT 59.415 43.478 0.00 0.00 36.88 3.24
1525 2806 3.685139 TTTCCCTAGTTGAGCACTCTG 57.315 47.619 0.00 0.00 36.88 3.35
1526 2807 2.604912 TCCCTAGTTGAGCACTCTGA 57.395 50.000 0.00 0.00 36.88 3.27
1528 2809 3.445008 TCCCTAGTTGAGCACTCTGAAT 58.555 45.455 0.00 0.00 36.88 2.57
1529 2810 3.840666 TCCCTAGTTGAGCACTCTGAATT 59.159 43.478 0.00 0.00 36.88 2.17
1530 2811 3.937706 CCCTAGTTGAGCACTCTGAATTG 59.062 47.826 0.00 0.00 36.88 2.32
1531 2812 3.373439 CCTAGTTGAGCACTCTGAATTGC 59.627 47.826 0.00 3.31 36.88 3.56
1532 2813 2.854963 AGTTGAGCACTCTGAATTGCA 58.145 42.857 12.09 0.00 41.48 4.08
1533 2814 2.551459 AGTTGAGCACTCTGAATTGCAC 59.449 45.455 12.09 7.33 41.48 4.57
1534 2815 1.150827 TGAGCACTCTGAATTGCACG 58.849 50.000 12.09 0.00 41.48 5.34
1535 2816 0.179205 GAGCACTCTGAATTGCACGC 60.179 55.000 12.09 0.00 41.48 5.34
1536 2817 1.154150 GCACTCTGAATTGCACGCC 60.154 57.895 6.14 0.00 38.68 5.68
1560 4096 2.495669 TGGCCAGTTAGCTTAATTTGGC 59.504 45.455 0.00 15.08 44.09 4.52
1597 4133 7.970614 GGACTTACTTTCTGCAATAAGATTTGG 59.029 37.037 12.90 3.37 0.00 3.28
1599 4135 8.515414 ACTTACTTTCTGCAATAAGATTTGGTC 58.485 33.333 12.90 0.00 0.00 4.02
1616 4152 3.571590 TGGTCATGCCTGTTTTACCTTT 58.428 40.909 7.54 0.00 38.35 3.11
2001 4537 2.579738 GAACGGGCTCAGGGTCTC 59.420 66.667 0.00 0.00 0.00 3.36
2068 4604 1.011794 GAAAGATGCAGCTACGCGC 60.012 57.895 4.15 0.00 39.57 6.86
2104 4640 2.706339 ATAGCAGCAAGACCCTCAAG 57.294 50.000 0.00 0.00 0.00 3.02
2146 4682 4.367023 TTCGCCGAACGTCTGGGG 62.367 66.667 14.62 14.62 44.19 4.96
2158 4694 1.474498 CGTCTGGGGCCTTACATTACC 60.474 57.143 0.84 0.00 0.00 2.85
2221 4757 5.405935 AGAAAATATTGGTTGAAGGTGGC 57.594 39.130 0.00 0.00 0.00 5.01
2278 4814 3.686016 TCCATTTGTTACCTCCTCAAGC 58.314 45.455 0.00 0.00 0.00 4.01
2377 4913 1.877443 GTTGCCTCTGAACCGCTTAAA 59.123 47.619 0.00 0.00 0.00 1.52
2378 4914 2.488153 GTTGCCTCTGAACCGCTTAAAT 59.512 45.455 0.00 0.00 0.00 1.40
2771 5310 4.085210 GGTAACGAAGAACGAAGAACAGTG 60.085 45.833 0.00 0.00 45.77 3.66
2781 5320 2.156504 CGAAGAACAGTGTGTGATGCTC 59.843 50.000 0.00 0.00 0.00 4.26
2782 5321 2.916702 AGAACAGTGTGTGATGCTCA 57.083 45.000 0.00 0.00 0.00 4.26
2792 5331 5.874810 AGTGTGTGATGCTCATATTACGTTT 59.125 36.000 0.00 0.00 0.00 3.60
2793 5332 6.036083 AGTGTGTGATGCTCATATTACGTTTC 59.964 38.462 0.00 0.00 0.00 2.78
2796 5335 6.847792 GTGTGATGCTCATATTACGTTTCATG 59.152 38.462 0.00 0.00 0.00 3.07
2798 5337 6.847792 GTGATGCTCATATTACGTTTCATGTG 59.152 38.462 0.00 0.00 0.00 3.21
2801 5340 7.552458 TGCTCATATTACGTTTCATGTGATT 57.448 32.000 0.00 0.00 0.00 2.57
2803 5342 9.103861 TGCTCATATTACGTTTCATGTGATTTA 57.896 29.630 0.00 0.00 0.00 1.40
2804 5343 9.929722 GCTCATATTACGTTTCATGTGATTTAA 57.070 29.630 0.00 0.00 0.00 1.52
2809 5348 8.909708 ATTACGTTTCATGTGATTTAATGTGG 57.090 30.769 0.00 0.00 0.00 4.17
2810 5349 5.160641 ACGTTTCATGTGATTTAATGTGGC 58.839 37.500 0.00 0.00 0.00 5.01
2811 5350 4.562394 CGTTTCATGTGATTTAATGTGGCC 59.438 41.667 0.00 0.00 0.00 5.36
2830 5386 0.385390 CTTTGCTTGGCTTGACGGTT 59.615 50.000 0.00 0.00 0.00 4.44
2839 5395 1.569479 GCTTGACGGTTGTCTCTGCC 61.569 60.000 0.00 0.00 45.70 4.85
2855 5411 1.480954 CTGCCGGTGTAGGTCAAGTAT 59.519 52.381 1.90 0.00 0.00 2.12
2861 5417 2.766828 GGTGTAGGTCAAGTATGAGGCT 59.233 50.000 0.00 0.00 35.88 4.58
2909 5465 1.226888 GGTGCGGGACTACGATGAC 60.227 63.158 0.00 0.00 35.47 3.06
3091 5730 6.476243 GCAATATGATTCAATCCAATTGCC 57.524 37.500 23.84 13.30 43.40 4.52
3136 5804 0.038166 TTTGCTGGCTGGAGTTAGGG 59.962 55.000 0.00 0.00 0.00 3.53
3177 5846 2.061773 CTCAGCTCCAACGTTGTACAG 58.938 52.381 25.63 18.33 0.00 2.74
3224 5893 1.546476 ACTGGAGCCACGAAGACTAAG 59.454 52.381 0.00 0.00 0.00 2.18
3301 5989 1.134280 CCGGGAGTCAGATGCAGATTT 60.134 52.381 0.00 0.00 0.00 2.17
3314 6002 8.188799 TCAGATGCAGATTTGAGATTGAAAATC 58.811 33.333 0.00 0.00 41.20 2.17
3316 6004 8.407064 AGATGCAGATTTGAGATTGAAAATCTC 58.593 33.333 18.78 18.78 45.57 2.75
3317 6005 7.698506 TGCAGATTTGAGATTGAAAATCTCT 57.301 32.000 23.50 9.67 45.57 3.10
3318 6006 7.759465 TGCAGATTTGAGATTGAAAATCTCTC 58.241 34.615 23.50 15.86 45.57 3.20
3344 6032 0.539986 ACGGGGTTCTCGCATATGTT 59.460 50.000 4.29 0.00 0.00 2.71
3368 6056 0.543277 ATGCTCGAATGCCCTCTTGA 59.457 50.000 0.00 0.00 0.00 3.02
3416 6104 1.418637 GGGGGTATCAAATACGCTGGA 59.581 52.381 12.18 0.00 45.05 3.86
3428 6116 2.684001 ACGCTGGATCGAATGGTTTA 57.316 45.000 0.00 0.00 0.00 2.01
3467 6155 9.952030 TCTATACTGAAATATGTGACCACAAAA 57.048 29.630 6.95 0.00 45.41 2.44
3481 6169 7.439655 TGTGACCACAAAATAAAATACAAAGCC 59.560 33.333 0.00 0.00 38.56 4.35
3493 6181 2.574006 ACAAAGCCATCTCTGCAGAA 57.426 45.000 18.85 9.34 30.24 3.02
3517 6205 1.269723 GGGCTTCAACCAAGTACAAGC 59.730 52.381 0.00 0.00 39.02 4.01
3522 6210 3.275617 TCAACCAAGTACAAGCACTGT 57.724 42.857 0.00 0.00 42.47 3.55
3525 6213 4.573201 TCAACCAAGTACAAGCACTGTAAC 59.427 41.667 0.00 0.00 42.23 2.50
3554 6242 5.810587 ACTCAACCAACGCTACATATGTTAG 59.189 40.000 14.77 10.26 0.00 2.34
3557 6245 7.045416 TCAACCAACGCTACATATGTTAGAAT 58.955 34.615 14.77 0.00 0.00 2.40
3559 6247 6.346096 ACCAACGCTACATATGTTAGAATGT 58.654 36.000 14.77 2.20 39.56 2.71
3560 6248 6.479001 ACCAACGCTACATATGTTAGAATGTC 59.521 38.462 14.77 0.00 37.50 3.06
3561 6249 6.345803 CCAACGCTACATATGTTAGAATGTCG 60.346 42.308 14.77 9.69 37.50 4.35
3563 6251 6.678878 ACGCTACATATGTTAGAATGTCGAT 58.321 36.000 14.77 0.00 37.50 3.59
3564 6252 6.582672 ACGCTACATATGTTAGAATGTCGATG 59.417 38.462 14.77 0.00 37.50 3.84
3565 6253 6.582672 CGCTACATATGTTAGAATGTCGATGT 59.417 38.462 14.77 0.00 37.50 3.06
3566 6254 7.409767 CGCTACATATGTTAGAATGTCGATGTG 60.410 40.741 14.77 0.00 37.50 3.21
3567 6255 7.148738 GCTACATATGTTAGAATGTCGATGTGG 60.149 40.741 14.77 0.00 37.50 4.17
3568 6256 5.991606 ACATATGTTAGAATGTCGATGTGGG 59.008 40.000 1.41 0.00 30.54 4.61
3570 6258 2.027653 TGTTAGAATGTCGATGTGGGCA 60.028 45.455 0.00 0.00 0.00 5.36
3571 6259 3.206150 GTTAGAATGTCGATGTGGGCAT 58.794 45.455 0.00 0.00 38.18 4.40
3572 6260 1.671979 AGAATGTCGATGTGGGCATG 58.328 50.000 0.00 0.00 35.07 4.06
3573 6261 0.664761 GAATGTCGATGTGGGCATGG 59.335 55.000 0.00 0.00 35.07 3.66
3574 6262 1.386525 AATGTCGATGTGGGCATGGC 61.387 55.000 11.56 11.56 35.07 4.40
3627 6315 6.933514 TTTTTATTTTGGAGAAGCCTGGAT 57.066 33.333 0.00 0.00 37.63 3.41
3629 6317 8.429237 TTTTTATTTTGGAGAAGCCTGGATAA 57.571 30.769 0.00 0.00 37.63 1.75
3630 6318 8.429237 TTTTATTTTGGAGAAGCCTGGATAAA 57.571 30.769 0.00 0.00 37.63 1.40
3631 6319 8.429237 TTTATTTTGGAGAAGCCTGGATAAAA 57.571 30.769 0.00 0.00 37.63 1.52
3632 6320 6.933514 ATTTTGGAGAAGCCTGGATAAAAA 57.066 33.333 0.00 0.00 37.63 1.94
3633 6321 6.933514 TTTTGGAGAAGCCTGGATAAAAAT 57.066 33.333 0.00 0.00 37.63 1.82
3634 6322 8.608185 ATTTTGGAGAAGCCTGGATAAAAATA 57.392 30.769 0.00 0.00 37.63 1.40
3635 6323 7.645058 TTTGGAGAAGCCTGGATAAAAATAG 57.355 36.000 0.00 0.00 37.63 1.73
3636 6324 5.133221 TGGAGAAGCCTGGATAAAAATAGC 58.867 41.667 0.00 0.00 37.63 2.97
3637 6325 5.133221 GGAGAAGCCTGGATAAAAATAGCA 58.867 41.667 0.00 0.00 0.00 3.49
3638 6326 5.594317 GGAGAAGCCTGGATAAAAATAGCAA 59.406 40.000 0.00 0.00 0.00 3.91
3639 6327 6.238869 GGAGAAGCCTGGATAAAAATAGCAAG 60.239 42.308 0.00 0.00 0.00 4.01
3640 6328 4.926140 AGCCTGGATAAAAATAGCAAGC 57.074 40.909 0.00 0.00 0.00 4.01
3641 6329 4.540715 AGCCTGGATAAAAATAGCAAGCT 58.459 39.130 0.00 0.00 0.00 3.74
3642 6330 5.694995 AGCCTGGATAAAAATAGCAAGCTA 58.305 37.500 4.00 4.00 0.00 3.32
3643 6331 6.129179 AGCCTGGATAAAAATAGCAAGCTAA 58.871 36.000 5.81 0.00 31.73 3.09
3644 6332 6.607198 AGCCTGGATAAAAATAGCAAGCTAAA 59.393 34.615 5.81 0.00 31.73 1.85
3645 6333 7.124147 AGCCTGGATAAAAATAGCAAGCTAAAA 59.876 33.333 5.81 0.00 31.73 1.52
3646 6334 7.763985 GCCTGGATAAAAATAGCAAGCTAAAAA 59.236 33.333 5.81 0.00 31.73 1.94
3669 6357 1.683790 GCACCCGACATTCGACTTCG 61.684 60.000 0.00 3.14 43.74 3.79
3698 6386 2.494059 CAGTTGGTTCATCACTCCGTT 58.506 47.619 0.00 0.00 0.00 4.44
3706 6394 4.454504 GGTTCATCACTCCGTTACAAACAT 59.545 41.667 0.00 0.00 0.00 2.71
3707 6395 5.382303 GTTCATCACTCCGTTACAAACATG 58.618 41.667 0.00 0.00 0.00 3.21
3709 6397 4.688879 TCATCACTCCGTTACAAACATGTC 59.311 41.667 0.00 0.00 0.00 3.06
3712 6400 4.055360 CACTCCGTTACAAACATGTCAGA 58.945 43.478 0.00 0.00 0.00 3.27
3719 6407 0.524862 CAAACATGTCAGAGCCCAGC 59.475 55.000 0.00 0.00 0.00 4.85
3728 6416 1.143684 TCAGAGCCCAGCTTGAAAACT 59.856 47.619 0.00 0.00 39.88 2.66
3732 6420 2.032981 CCCAGCTTGAAAACTGCGT 58.967 52.632 0.00 0.00 32.37 5.24
3742 6430 4.891627 TGAAAACTGCGTCAAATCTCAA 57.108 36.364 0.00 0.00 0.00 3.02
3747 6435 2.146342 CTGCGTCAAATCTCAACAGGT 58.854 47.619 0.00 0.00 0.00 4.00
3748 6436 1.872952 TGCGTCAAATCTCAACAGGTG 59.127 47.619 0.00 0.00 0.00 4.00
3753 6441 2.618241 TCAAATCTCAACAGGTGTGTGC 59.382 45.455 0.00 0.00 36.84 4.57
3760 6448 2.632512 TCAACAGGTGTGTGCAGATAGA 59.367 45.455 0.00 0.00 36.84 1.98
3761 6449 3.070878 TCAACAGGTGTGTGCAGATAGAA 59.929 43.478 0.00 0.00 36.84 2.10
3764 6452 3.815401 ACAGGTGTGTGCAGATAGAAAAC 59.185 43.478 0.00 0.00 34.75 2.43
3769 6457 4.036262 GTGTGTGCAGATAGAAAACCACAA 59.964 41.667 1.61 0.00 35.30 3.33
3778 6466 6.207417 CAGATAGAAAACCACAACCACTCATT 59.793 38.462 0.00 0.00 0.00 2.57
3779 6467 4.654091 AGAAAACCACAACCACTCATTG 57.346 40.909 0.00 0.00 0.00 2.82
3805 6501 4.202020 CGGCACTAGAGACAATAGCTTGTA 60.202 45.833 0.00 0.00 45.57 2.41
3838 6534 2.280389 CCGTGCAGATCGATGGGG 60.280 66.667 0.54 0.00 0.00 4.96
3860 6556 4.261741 GGACACAACTACGAAAGAGTGGTA 60.262 45.833 16.52 0.00 38.33 3.25
3877 6573 7.203910 AGAGTGGTAGTTAGAAATTAGCATCG 58.796 38.462 0.00 0.00 34.39 3.84
3890 8942 1.571919 AGCATCGGTCGTATTCAAGC 58.428 50.000 0.00 0.00 0.00 4.01
3920 8972 2.642311 TGTAATTGGCCTCTTGAGTGGA 59.358 45.455 3.32 0.00 0.00 4.02
3927 8979 2.092753 GGCCTCTTGAGTGGAATGATGA 60.093 50.000 0.00 0.00 0.00 2.92
3928 8980 3.434739 GGCCTCTTGAGTGGAATGATGAT 60.435 47.826 0.00 0.00 0.00 2.45
3929 8981 3.564644 GCCTCTTGAGTGGAATGATGATG 59.435 47.826 3.39 0.00 0.00 3.07
3930 8982 4.685302 GCCTCTTGAGTGGAATGATGATGA 60.685 45.833 3.39 0.00 0.00 2.92
3931 8983 5.622180 CCTCTTGAGTGGAATGATGATGAT 58.378 41.667 0.00 0.00 0.00 2.45
3932 8984 5.470437 CCTCTTGAGTGGAATGATGATGATG 59.530 44.000 0.00 0.00 0.00 3.07
3933 8985 6.243216 TCTTGAGTGGAATGATGATGATGA 57.757 37.500 0.00 0.00 0.00 2.92
3934 8986 6.838382 TCTTGAGTGGAATGATGATGATGAT 58.162 36.000 0.00 0.00 0.00 2.45
3935 8987 6.710744 TCTTGAGTGGAATGATGATGATGATG 59.289 38.462 0.00 0.00 0.00 3.07
3936 8988 5.313712 TGAGTGGAATGATGATGATGATGG 58.686 41.667 0.00 0.00 0.00 3.51
3937 8989 5.072600 TGAGTGGAATGATGATGATGATGGA 59.927 40.000 0.00 0.00 0.00 3.41
3938 8990 6.140968 AGTGGAATGATGATGATGATGGAT 57.859 37.500 0.00 0.00 0.00 3.41
3939 8991 6.552932 AGTGGAATGATGATGATGATGGATT 58.447 36.000 0.00 0.00 0.00 3.01
3940 8992 7.010771 AGTGGAATGATGATGATGATGGATTT 58.989 34.615 0.00 0.00 0.00 2.17
3961 9013 8.180267 GGATTTCTTGTCAACATCTTGTGATAG 58.820 37.037 0.00 0.00 0.00 2.08
3962 9014 8.627208 ATTTCTTGTCAACATCTTGTGATAGT 57.373 30.769 0.00 0.00 0.00 2.12
3963 9015 9.725019 ATTTCTTGTCAACATCTTGTGATAGTA 57.275 29.630 0.00 0.00 0.00 1.82
3964 9016 9.725019 TTTCTTGTCAACATCTTGTGATAGTAT 57.275 29.630 0.00 0.00 0.00 2.12
3965 9017 9.725019 TTCTTGTCAACATCTTGTGATAGTATT 57.275 29.630 0.00 0.00 0.00 1.89
3966 9018 9.725019 TCTTGTCAACATCTTGTGATAGTATTT 57.275 29.630 0.00 0.00 0.00 1.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
7 8 2.040813 AGAAAAGCAAGGATCCAGCTGA 59.959 45.455 26.45 1.21 38.86 4.26
18 19 4.495349 CGGCATCTGTATCAGAAAAGCAAG 60.495 45.833 17.05 10.55 44.04 4.01
21 22 2.286654 GCGGCATCTGTATCAGAAAAGC 60.287 50.000 3.58 8.15 44.04 3.51
39 40 0.025001 CGTCGATGCAACTTAAGCGG 59.975 55.000 1.29 0.00 33.85 5.52
75 76 7.994911 AGCTATACATCTCAAAAATGTCATCCA 59.005 33.333 0.00 0.00 38.31 3.41
81 85 7.172190 CGGATCAGCTATACATCTCAAAAATGT 59.828 37.037 0.00 0.00 40.37 2.71
92 96 4.408276 ACAGTACCGGATCAGCTATACAT 58.592 43.478 9.46 0.00 0.00 2.29
99 103 1.732259 CACAAACAGTACCGGATCAGC 59.268 52.381 9.46 0.00 0.00 4.26
228 232 2.423538 GCCGTTGCCTGATGAATTTAGT 59.576 45.455 0.00 0.00 0.00 2.24
229 233 2.423185 TGCCGTTGCCTGATGAATTTAG 59.577 45.455 0.00 0.00 36.33 1.85
230 234 2.441410 TGCCGTTGCCTGATGAATTTA 58.559 42.857 0.00 0.00 36.33 1.40
231 235 1.255882 TGCCGTTGCCTGATGAATTT 58.744 45.000 0.00 0.00 36.33 1.82
232 236 1.477553 ATGCCGTTGCCTGATGAATT 58.522 45.000 0.00 0.00 36.33 2.17
233 237 2.346766 TATGCCGTTGCCTGATGAAT 57.653 45.000 0.00 0.00 36.33 2.57
234 238 2.346766 ATATGCCGTTGCCTGATGAA 57.653 45.000 0.00 0.00 36.33 2.57
235 239 2.346766 AATATGCCGTTGCCTGATGA 57.653 45.000 0.00 0.00 36.33 2.92
236 240 3.503363 ACATAATATGCCGTTGCCTGATG 59.497 43.478 0.00 0.00 36.33 3.07
237 241 3.754965 ACATAATATGCCGTTGCCTGAT 58.245 40.909 0.00 0.00 36.33 2.90
238 242 3.207265 ACATAATATGCCGTTGCCTGA 57.793 42.857 0.00 0.00 36.33 3.86
239 243 3.066621 ACAACATAATATGCCGTTGCCTG 59.933 43.478 0.00 0.00 41.90 4.85
240 244 3.287222 ACAACATAATATGCCGTTGCCT 58.713 40.909 0.00 0.00 41.90 4.75
241 245 3.708563 ACAACATAATATGCCGTTGCC 57.291 42.857 0.00 0.00 41.90 4.52
242 246 5.418310 ACTACAACATAATATGCCGTTGC 57.582 39.130 0.00 0.00 41.90 4.17
243 247 6.347402 GGCTACTACAACATAATATGCCGTTG 60.347 42.308 0.00 8.91 43.40 4.10
244 248 5.699458 GGCTACTACAACATAATATGCCGTT 59.301 40.000 0.00 0.00 0.00 4.44
266 270 2.825086 AAGCGTATCATCAAAACGGC 57.175 45.000 0.00 0.00 37.12 5.68
270 274 6.128117 GGACTGGTAAAAGCGTATCATCAAAA 60.128 38.462 0.00 0.00 0.00 2.44
271 275 5.353123 GGACTGGTAAAAGCGTATCATCAAA 59.647 40.000 0.00 0.00 0.00 2.69
273 277 4.161565 AGGACTGGTAAAAGCGTATCATCA 59.838 41.667 0.00 0.00 0.00 3.07
290 294 5.253330 ACAACATAAATACCACCAGGACTG 58.747 41.667 0.00 0.00 38.69 3.51
294 298 8.581578 AGTAAAAACAACATAAATACCACCAGG 58.418 33.333 0.00 0.00 42.21 4.45
295 299 9.405587 CAGTAAAAACAACATAAATACCACCAG 57.594 33.333 0.00 0.00 0.00 4.00
317 334 8.633561 CATTCAAGTATCTCAGTACATCCAGTA 58.366 37.037 0.00 0.00 0.00 2.74
348 370 6.572519 AGCACAGCTTAAAACAGATCAAAAA 58.427 32.000 0.00 0.00 33.89 1.94
359 381 3.724374 ACTACGTGAGCACAGCTTAAAA 58.276 40.909 0.00 0.00 39.88 1.52
360 382 3.380479 ACTACGTGAGCACAGCTTAAA 57.620 42.857 0.00 0.00 39.88 1.52
361 383 3.057019 CAACTACGTGAGCACAGCTTAA 58.943 45.455 0.00 0.00 39.88 1.85
363 385 1.068588 TCAACTACGTGAGCACAGCTT 59.931 47.619 0.00 0.00 39.88 3.74
365 387 1.656095 GATCAACTACGTGAGCACAGC 59.344 52.381 0.00 0.00 34.04 4.40
366 388 1.914051 CGATCAACTACGTGAGCACAG 59.086 52.381 0.00 0.00 33.44 3.66
376 398 5.168569 TCAGATTTGGTCACGATCAACTAC 58.831 41.667 0.00 0.00 29.94 2.73
407 429 0.170339 GAAAAGTATGCACACCGGCC 59.830 55.000 0.00 0.00 0.00 6.13
408 430 1.135689 CAGAAAAGTATGCACACCGGC 60.136 52.381 0.00 0.00 0.00 6.13
409 431 2.422597 TCAGAAAAGTATGCACACCGG 58.577 47.619 0.00 0.00 0.00 5.28
411 433 5.376854 AACATCAGAAAAGTATGCACACC 57.623 39.130 0.00 0.00 0.00 4.16
416 438 5.529060 CCCTAGGAACATCAGAAAAGTATGC 59.471 44.000 11.48 0.00 0.00 3.14
420 442 4.019231 GGACCCTAGGAACATCAGAAAAGT 60.019 45.833 11.48 0.00 0.00 2.66
424 446 3.491766 AGGACCCTAGGAACATCAGAA 57.508 47.619 11.48 0.00 0.00 3.02
425 447 3.491766 AAGGACCCTAGGAACATCAGA 57.508 47.619 11.48 0.00 0.00 3.27
453 532 1.490621 GCAAATTGCTTTCACGCAGT 58.509 45.000 11.19 0.00 41.13 4.40
469 548 5.551233 ACAGTTAGCAGAATAACAGAGCAA 58.449 37.500 0.05 0.00 37.98 3.91
470 549 5.047021 AGACAGTTAGCAGAATAACAGAGCA 60.047 40.000 0.05 0.00 37.98 4.26
471 550 5.415221 AGACAGTTAGCAGAATAACAGAGC 58.585 41.667 0.05 0.00 37.98 4.09
472 551 7.990917 TCTAGACAGTTAGCAGAATAACAGAG 58.009 38.462 0.00 0.00 37.98 3.35
473 552 7.939784 TCTAGACAGTTAGCAGAATAACAGA 57.060 36.000 0.00 0.00 37.98 3.41
474 553 8.462811 TCTTCTAGACAGTTAGCAGAATAACAG 58.537 37.037 0.00 0.00 37.98 3.16
475 554 8.349568 TCTTCTAGACAGTTAGCAGAATAACA 57.650 34.615 0.00 0.00 37.98 2.41
486 565 7.672660 TCTGTAACCCATTCTTCTAGACAGTTA 59.327 37.037 0.00 0.00 34.70 2.24
489 568 6.406400 CCTCTGTAACCCATTCTTCTAGACAG 60.406 46.154 0.00 0.00 34.46 3.51
491 570 5.682730 GCCTCTGTAACCCATTCTTCTAGAC 60.683 48.000 0.00 0.00 0.00 2.59
492 571 4.406003 GCCTCTGTAACCCATTCTTCTAGA 59.594 45.833 0.00 0.00 0.00 2.43
495 574 2.912956 TGCCTCTGTAACCCATTCTTCT 59.087 45.455 0.00 0.00 0.00 2.85
496 575 3.350219 TGCCTCTGTAACCCATTCTTC 57.650 47.619 0.00 0.00 0.00 2.87
497 576 4.322057 AATGCCTCTGTAACCCATTCTT 57.678 40.909 0.00 0.00 0.00 2.52
499 578 4.462483 TCAAAATGCCTCTGTAACCCATTC 59.538 41.667 0.00 0.00 0.00 2.67
501 580 3.763897 GTCAAAATGCCTCTGTAACCCAT 59.236 43.478 0.00 0.00 0.00 4.00
502 581 3.153919 GTCAAAATGCCTCTGTAACCCA 58.846 45.455 0.00 0.00 0.00 4.51
503 582 3.421844 AGTCAAAATGCCTCTGTAACCC 58.578 45.455 0.00 0.00 0.00 4.11
505 584 4.229876 GCAAGTCAAAATGCCTCTGTAAC 58.770 43.478 0.00 0.00 36.56 2.50
507 586 3.485394 TGCAAGTCAAAATGCCTCTGTA 58.515 40.909 0.00 0.00 41.87 2.74
508 587 2.309613 TGCAAGTCAAAATGCCTCTGT 58.690 42.857 0.00 0.00 41.87 3.41
509 588 3.587797 ATGCAAGTCAAAATGCCTCTG 57.412 42.857 0.00 0.00 41.87 3.35
510 589 4.039488 TGAAATGCAAGTCAAAATGCCTCT 59.961 37.500 0.00 0.00 41.87 3.69
511 590 4.309099 TGAAATGCAAGTCAAAATGCCTC 58.691 39.130 0.00 0.00 41.87 4.70
512 591 4.339872 TGAAATGCAAGTCAAAATGCCT 57.660 36.364 0.00 0.00 41.87 4.75
513 592 5.421212 TTTGAAATGCAAGTCAAAATGCC 57.579 34.783 20.06 0.00 40.00 4.40
514 593 9.615295 ATTTATTTGAAATGCAAGTCAAAATGC 57.385 25.926 23.89 0.00 44.52 3.56
520 599 9.656040 AGCAATATTTATTTGAAATGCAAGTCA 57.344 25.926 0.00 0.00 37.87 3.41
523 602 7.581241 CGCAGCAATATTTATTTGAAATGCAAG 59.419 33.333 0.00 0.00 37.87 4.01
527 606 7.842239 CACACGCAGCAATATTTATTTGAAATG 59.158 33.333 0.00 0.00 0.00 2.32
540 619 0.533978 ACACACCACACGCAGCAATA 60.534 50.000 0.00 0.00 0.00 1.90
541 620 1.785041 GACACACCACACGCAGCAAT 61.785 55.000 0.00 0.00 0.00 3.56
542 621 2.437537 ACACACCACACGCAGCAA 60.438 55.556 0.00 0.00 0.00 3.91
543 622 2.867793 AAGACACACCACACGCAGCA 62.868 55.000 0.00 0.00 0.00 4.41
544 623 1.714899 AAAGACACACCACACGCAGC 61.715 55.000 0.00 0.00 0.00 5.25
545 624 0.304705 GAAAGACACACCACACGCAG 59.695 55.000 0.00 0.00 0.00 5.18
548 627 0.937304 CTGGAAAGACACACCACACG 59.063 55.000 0.00 0.00 0.00 4.49
549 628 1.308998 CCTGGAAAGACACACCACAC 58.691 55.000 0.00 0.00 0.00 3.82
550 629 0.182537 CCCTGGAAAGACACACCACA 59.817 55.000 0.00 0.00 0.00 4.17
552 631 1.444933 ATCCCTGGAAAGACACACCA 58.555 50.000 0.00 0.00 0.00 4.17
553 632 2.586648 AATCCCTGGAAAGACACACC 57.413 50.000 0.00 0.00 0.00 4.16
554 633 4.080299 AGGATAATCCCTGGAAAGACACAC 60.080 45.833 0.00 0.00 37.19 3.82
555 634 4.111577 AGGATAATCCCTGGAAAGACACA 58.888 43.478 0.00 0.00 37.19 3.72
556 635 4.709250 GAGGATAATCCCTGGAAAGACAC 58.291 47.826 0.00 0.00 37.19 3.67
559 638 3.654273 ACGAGGATAATCCCTGGAAAGA 58.346 45.455 0.00 0.00 37.19 2.52
560 639 5.746990 ATACGAGGATAATCCCTGGAAAG 57.253 43.478 0.00 0.00 37.19 2.62
561 640 8.904648 TTATATACGAGGATAATCCCTGGAAA 57.095 34.615 0.00 0.00 37.19 3.13
562 641 8.341513 TCTTATATACGAGGATAATCCCTGGAA 58.658 37.037 0.00 0.00 37.19 3.53
563 642 7.879558 TCTTATATACGAGGATAATCCCTGGA 58.120 38.462 0.00 0.00 37.19 3.86
564 643 8.534954 TTCTTATATACGAGGATAATCCCTGG 57.465 38.462 0.00 0.00 37.19 4.45
566 645 9.992442 TCTTTCTTATATACGAGGATAATCCCT 57.008 33.333 0.00 0.00 37.19 4.20
603 1129 8.489990 TTGACTTTGCAATTTTTCATCTGAAA 57.510 26.923 0.00 1.28 41.77 2.69
606 1132 9.199982 ACTATTGACTTTGCAATTTTTCATCTG 57.800 29.630 0.00 0.00 39.15 2.90
607 1133 9.768662 AACTATTGACTTTGCAATTTTTCATCT 57.231 25.926 0.00 0.00 39.15 2.90
619 1145 9.476202 AAGGTTTCAAATAACTATTGACTTTGC 57.524 29.630 0.00 0.00 36.57 3.68
623 1149 8.793592 GTCCAAGGTTTCAAATAACTATTGACT 58.206 33.333 0.00 0.00 36.57 3.41
624 1150 8.573035 TGTCCAAGGTTTCAAATAACTATTGAC 58.427 33.333 0.00 0.00 36.57 3.18
626 1152 8.576442 ACTGTCCAAGGTTTCAAATAACTATTG 58.424 33.333 0.00 0.00 0.00 1.90
629 1155 7.776030 TGAACTGTCCAAGGTTTCAAATAACTA 59.224 33.333 0.00 0.00 0.00 2.24
630 1156 6.605594 TGAACTGTCCAAGGTTTCAAATAACT 59.394 34.615 0.00 0.00 0.00 2.24
631 1157 6.801575 TGAACTGTCCAAGGTTTCAAATAAC 58.198 36.000 0.00 0.00 0.00 1.89
632 1158 6.831353 TCTGAACTGTCCAAGGTTTCAAATAA 59.169 34.615 0.00 0.00 0.00 1.40
633 1159 6.262273 GTCTGAACTGTCCAAGGTTTCAAATA 59.738 38.462 0.00 0.00 0.00 1.40
634 1160 5.067805 GTCTGAACTGTCCAAGGTTTCAAAT 59.932 40.000 0.00 0.00 0.00 2.32
636 1162 3.945285 GTCTGAACTGTCCAAGGTTTCAA 59.055 43.478 0.00 0.00 0.00 2.69
637 1163 3.199946 AGTCTGAACTGTCCAAGGTTTCA 59.800 43.478 0.00 0.00 33.32 2.69
640 1166 3.933861 AAGTCTGAACTGTCCAAGGTT 57.066 42.857 0.00 0.00 35.36 3.50
661 1187 8.670135 TGAACTGTCTCGAGTTTCAAATAAAAA 58.330 29.630 13.13 0.00 36.27 1.94
666 1418 4.752101 CCTGAACTGTCTCGAGTTTCAAAT 59.248 41.667 13.13 2.85 36.27 2.32
676 1428 2.447244 AGAAAGCCTGAACTGTCTCG 57.553 50.000 0.00 0.00 27.09 4.04
679 1431 4.900635 TCAAAAGAAAGCCTGAACTGTC 57.099 40.909 0.00 0.00 0.00 3.51
680 1432 5.410924 GTTTCAAAAGAAAGCCTGAACTGT 58.589 37.500 0.00 0.00 0.00 3.55
681 1433 4.805719 GGTTTCAAAAGAAAGCCTGAACTG 59.194 41.667 8.51 0.00 36.79 3.16
682 1434 4.711846 AGGTTTCAAAAGAAAGCCTGAACT 59.288 37.500 14.33 0.00 41.79 3.01
683 1435 5.011090 AGGTTTCAAAAGAAAGCCTGAAC 57.989 39.130 14.33 0.00 41.79 3.18
684 1436 5.675684 AAGGTTTCAAAAGAAAGCCTGAA 57.324 34.783 14.33 0.00 41.79 3.02
685 1437 6.039382 GTCTAAGGTTTCAAAAGAAAGCCTGA 59.961 38.462 14.33 8.89 41.79 3.86
686 1438 6.183360 TGTCTAAGGTTTCAAAAGAAAGCCTG 60.183 38.462 14.33 7.18 41.79 4.85
687 1439 5.891551 TGTCTAAGGTTTCAAAAGAAAGCCT 59.108 36.000 14.33 10.02 41.79 4.58
688 1440 6.144078 TGTCTAAGGTTTCAAAAGAAAGCC 57.856 37.500 14.33 8.34 41.79 4.35
689 1441 8.648557 AATTGTCTAAGGTTTCAAAAGAAAGC 57.351 30.769 11.06 11.06 41.33 3.51
690 1442 9.801873 TGAATTGTCTAAGGTTTCAAAAGAAAG 57.198 29.630 0.00 0.00 0.00 2.62
691 1443 9.801873 CTGAATTGTCTAAGGTTTCAAAAGAAA 57.198 29.630 0.00 0.00 0.00 2.52
692 1444 9.184523 TCTGAATTGTCTAAGGTTTCAAAAGAA 57.815 29.630 0.00 0.00 0.00 2.52
693 1445 8.746052 TCTGAATTGTCTAAGGTTTCAAAAGA 57.254 30.769 0.00 0.00 0.00 2.52
773 1525 8.730680 GGTCTGAATTGTCTAAAGCTTGATAAA 58.269 33.333 0.00 0.00 0.00 1.40
774 1526 8.103305 AGGTCTGAATTGTCTAAAGCTTGATAA 58.897 33.333 0.00 0.00 0.00 1.75
775 1527 7.624549 AGGTCTGAATTGTCTAAAGCTTGATA 58.375 34.615 0.00 0.00 0.00 2.15
776 1528 6.479884 AGGTCTGAATTGTCTAAAGCTTGAT 58.520 36.000 0.00 0.00 0.00 2.57
777 1529 5.869579 AGGTCTGAATTGTCTAAAGCTTGA 58.130 37.500 0.00 0.00 0.00 3.02
778 1530 6.566197 AAGGTCTGAATTGTCTAAAGCTTG 57.434 37.500 0.00 0.00 0.00 4.01
779 1531 7.588497 AAAAGGTCTGAATTGTCTAAAGCTT 57.412 32.000 0.00 0.00 0.00 3.74
780 1532 7.588497 AAAAAGGTCTGAATTGTCTAAAGCT 57.412 32.000 0.00 0.00 0.00 3.74
807 1559 2.416893 GGGCTGAATTGTCTCGAGTTTC 59.583 50.000 13.13 11.69 0.00 2.78
813 1565 4.225497 GGGGGCTGAATTGTCTCG 57.775 61.111 0.00 0.00 0.00 4.04
837 1589 4.193090 TGAACTGCCTCGAGTTACAAAAA 58.807 39.130 12.31 0.00 36.27 1.94
838 1590 3.799366 TGAACTGCCTCGAGTTACAAAA 58.201 40.909 12.31 0.00 36.27 2.44
839 1591 3.390135 CTGAACTGCCTCGAGTTACAAA 58.610 45.455 12.31 0.00 36.27 2.83
840 1592 2.288825 CCTGAACTGCCTCGAGTTACAA 60.289 50.000 12.31 0.00 36.27 2.41
841 1593 1.272490 CCTGAACTGCCTCGAGTTACA 59.728 52.381 12.31 5.80 36.27 2.41
842 1594 1.997669 CCTGAACTGCCTCGAGTTAC 58.002 55.000 12.31 0.83 36.27 2.50
843 1595 0.246635 GCCTGAACTGCCTCGAGTTA 59.753 55.000 12.31 0.00 36.27 2.24
844 1596 1.004440 GCCTGAACTGCCTCGAGTT 60.004 57.895 12.31 0.00 38.94 3.01
845 1597 1.476007 AAGCCTGAACTGCCTCGAGT 61.476 55.000 12.31 0.00 0.00 4.18
846 1598 0.321122 AAAGCCTGAACTGCCTCGAG 60.321 55.000 5.13 5.13 0.00 4.04
847 1599 0.108585 AAAAGCCTGAACTGCCTCGA 59.891 50.000 0.00 0.00 0.00 4.04
848 1600 0.954452 AAAAAGCCTGAACTGCCTCG 59.046 50.000 0.00 0.00 0.00 4.63
849 1601 1.956477 TGAAAAAGCCTGAACTGCCTC 59.044 47.619 0.00 0.00 0.00 4.70
850 1602 2.071778 TGAAAAAGCCTGAACTGCCT 57.928 45.000 0.00 0.00 0.00 4.75
851 1603 2.297033 TCATGAAAAAGCCTGAACTGCC 59.703 45.455 0.00 0.00 0.00 4.85
852 1604 3.648339 TCATGAAAAAGCCTGAACTGC 57.352 42.857 0.00 0.00 0.00 4.40
853 1605 5.594926 AGTTTCATGAAAAAGCCTGAACTG 58.405 37.500 22.07 0.00 31.33 3.16
854 1606 5.859205 AGTTTCATGAAAAAGCCTGAACT 57.141 34.783 22.07 9.82 31.33 3.01
855 1607 6.042143 TCAAGTTTCATGAAAAAGCCTGAAC 58.958 36.000 22.07 7.65 31.33 3.18
856 1608 6.096705 TCTCAAGTTTCATGAAAAAGCCTGAA 59.903 34.615 22.07 6.67 31.33 3.02
857 1609 5.593909 TCTCAAGTTTCATGAAAAAGCCTGA 59.406 36.000 22.07 16.82 31.33 3.86
858 1610 5.689068 GTCTCAAGTTTCATGAAAAAGCCTG 59.311 40.000 22.07 14.00 31.33 4.85
859 1611 5.360714 TGTCTCAAGTTTCATGAAAAAGCCT 59.639 36.000 22.07 12.19 31.33 4.58
860 1612 5.591099 TGTCTCAAGTTTCATGAAAAAGCC 58.409 37.500 22.07 10.10 31.33 4.35
861 1613 7.704789 ATTGTCTCAAGTTTCATGAAAAAGC 57.295 32.000 22.07 10.45 31.33 3.51
862 1614 9.304731 TGAATTGTCTCAAGTTTCATGAAAAAG 57.695 29.630 22.07 15.91 31.33 2.27
863 1615 9.304731 CTGAATTGTCTCAAGTTTCATGAAAAA 57.695 29.630 22.07 10.74 31.33 1.94
864 1616 8.685427 TCTGAATTGTCTCAAGTTTCATGAAAA 58.315 29.630 22.07 6.30 31.33 2.29
865 1617 8.224389 TCTGAATTGTCTCAAGTTTCATGAAA 57.776 30.769 16.91 16.91 0.00 2.69
866 1618 7.806409 TCTGAATTGTCTCAAGTTTCATGAA 57.194 32.000 3.38 3.38 0.00 2.57
867 1619 7.991084 ATCTGAATTGTCTCAAGTTTCATGA 57.009 32.000 0.00 0.00 0.00 3.07
868 1620 9.125906 GAAATCTGAATTGTCTCAAGTTTCATG 57.874 33.333 0.00 0.00 33.38 3.07
869 1621 8.302438 GGAAATCTGAATTGTCTCAAGTTTCAT 58.698 33.333 0.00 0.00 34.07 2.57
870 1622 7.503566 AGGAAATCTGAATTGTCTCAAGTTTCA 59.496 33.333 0.00 0.00 34.07 2.69
871 1623 7.880105 AGGAAATCTGAATTGTCTCAAGTTTC 58.120 34.615 0.00 0.00 32.90 2.78
877 1629 6.777091 TCCAAAAGGAAATCTGAATTGTCTCA 59.223 34.615 0.00 0.00 0.00 3.27
891 1643 3.828451 CCTCTGCTCAATCCAAAAGGAAA 59.172 43.478 0.00 0.00 0.00 3.13
893 1645 2.291153 CCCTCTGCTCAATCCAAAAGGA 60.291 50.000 0.00 0.00 0.00 3.36
895 1647 2.097825 CCCCTCTGCTCAATCCAAAAG 58.902 52.381 0.00 0.00 0.00 2.27
909 1664 3.912907 CGCGCCGTTATCCCCTCT 61.913 66.667 0.00 0.00 0.00 3.69
926 1681 1.026182 TGAATGCGATGGCTGTGGAC 61.026 55.000 0.15 0.00 40.82 4.02
957 1712 2.552155 CGATCAGGTTGTGGAGGGAAAA 60.552 50.000 0.00 0.00 0.00 2.29
959 1714 0.613260 CGATCAGGTTGTGGAGGGAA 59.387 55.000 0.00 0.00 0.00 3.97
964 1719 3.399330 GAAAAGACGATCAGGTTGTGGA 58.601 45.455 0.00 0.00 0.00 4.02
965 1720 2.484264 GGAAAAGACGATCAGGTTGTGG 59.516 50.000 0.00 0.00 0.00 4.17
968 1723 3.003480 GAGGGAAAAGACGATCAGGTTG 58.997 50.000 0.00 0.00 0.00 3.77
969 1724 2.027100 GGAGGGAAAAGACGATCAGGTT 60.027 50.000 0.00 0.00 0.00 3.50
970 1725 1.555533 GGAGGGAAAAGACGATCAGGT 59.444 52.381 0.00 0.00 0.00 4.00
971 1726 1.471676 CGGAGGGAAAAGACGATCAGG 60.472 57.143 0.00 0.00 0.00 3.86
972 1727 1.204941 ACGGAGGGAAAAGACGATCAG 59.795 52.381 0.00 0.00 0.00 2.90
973 1728 1.203994 GACGGAGGGAAAAGACGATCA 59.796 52.381 0.00 0.00 0.00 2.92
974 1729 1.471153 GGACGGAGGGAAAAGACGATC 60.471 57.143 0.00 0.00 0.00 3.69
975 1730 0.535797 GGACGGAGGGAAAAGACGAT 59.464 55.000 0.00 0.00 0.00 3.73
976 1731 1.870055 CGGACGGAGGGAAAAGACGA 61.870 60.000 0.00 0.00 0.00 4.20
1039 1794 2.041405 GGGGAGGAGGAGGAGGTG 60.041 72.222 0.00 0.00 0.00 4.00
1040 1795 3.756783 CGGGGAGGAGGAGGAGGT 61.757 72.222 0.00 0.00 0.00 3.85
1043 1798 4.465446 CAGCGGGGAGGAGGAGGA 62.465 72.222 0.00 0.00 0.00 3.71
1093 1848 2.669569 CCTGAGCACCACCAACCG 60.670 66.667 0.00 0.00 0.00 4.44
1094 1849 2.282462 CCCTGAGCACCACCAACC 60.282 66.667 0.00 0.00 0.00 3.77
1095 1850 2.985847 GCCCTGAGCACCACCAAC 60.986 66.667 0.00 0.00 42.97 3.77
1096 1851 4.284550 GGCCCTGAGCACCACCAA 62.285 66.667 0.00 0.00 46.50 3.67
1218 1985 4.697756 TTGCCCTTGCCCTCGTCG 62.698 66.667 0.00 0.00 36.33 5.12
1345 2119 0.391927 CCATCCGGGCTAAACGAACA 60.392 55.000 0.00 0.00 0.00 3.18
1349 2123 0.675522 AACACCATCCGGGCTAAACG 60.676 55.000 0.00 0.00 42.05 3.60
1405 2179 2.242797 ATTGGGCAATTTCCGCTGGC 62.243 55.000 0.00 0.00 37.39 4.85
1409 2183 3.798380 GCATTGGGCAATTTCCGC 58.202 55.556 0.00 0.00 43.97 5.54
1420 2194 1.508088 GGACAAGCGAAGGCATTGG 59.492 57.895 0.00 0.00 43.41 3.16
1464 2238 5.600908 TTTAACAGGTCGAAGTTGTATGC 57.399 39.130 8.82 0.00 0.00 3.14
1495 2776 5.529060 GCTCAACTAGGGAAATGTAGGATTG 59.471 44.000 0.00 0.00 0.00 2.67
1502 2783 3.584848 AGAGTGCTCAACTAGGGAAATGT 59.415 43.478 1.82 0.00 40.07 2.71
1503 2784 3.937706 CAGAGTGCTCAACTAGGGAAATG 59.062 47.826 1.82 0.00 40.07 2.32
1504 2785 3.840666 TCAGAGTGCTCAACTAGGGAAAT 59.159 43.478 1.82 0.00 40.07 2.17
1505 2786 3.239449 TCAGAGTGCTCAACTAGGGAAA 58.761 45.455 1.82 0.00 40.07 3.13
1508 2789 3.902881 ATTCAGAGTGCTCAACTAGGG 57.097 47.619 1.82 0.00 40.07 3.53
1510 2791 3.999001 TGCAATTCAGAGTGCTCAACTAG 59.001 43.478 9.05 0.00 46.45 2.57
1511 2792 3.748048 GTGCAATTCAGAGTGCTCAACTA 59.252 43.478 9.05 0.00 46.45 2.24
1512 2793 2.551459 GTGCAATTCAGAGTGCTCAACT 59.449 45.455 9.05 0.00 46.45 3.16
1513 2794 2.663879 CGTGCAATTCAGAGTGCTCAAC 60.664 50.000 9.05 0.37 46.45 3.18
1516 2797 0.179205 GCGTGCAATTCAGAGTGCTC 60.179 55.000 9.05 5.33 46.45 4.26
1517 2798 1.580845 GGCGTGCAATTCAGAGTGCT 61.581 55.000 9.05 0.00 46.45 4.40
1519 2800 0.167470 CAGGCGTGCAATTCAGAGTG 59.833 55.000 0.00 0.00 0.00 3.51
1520 2801 0.250467 ACAGGCGTGCAATTCAGAGT 60.250 50.000 6.26 0.00 0.00 3.24
1521 2802 0.167470 CACAGGCGTGCAATTCAGAG 59.833 55.000 6.26 0.00 36.06 3.35
1522 2803 1.236616 CCACAGGCGTGCAATTCAGA 61.237 55.000 6.26 0.00 42.17 3.27
1523 2804 1.210931 CCACAGGCGTGCAATTCAG 59.789 57.895 6.26 0.00 42.17 3.02
1524 2805 2.918345 GCCACAGGCGTGCAATTCA 61.918 57.895 6.26 0.00 42.17 2.57
1525 2806 2.126346 GCCACAGGCGTGCAATTC 60.126 61.111 6.26 0.00 42.17 2.17
1540 4076 2.760650 AGCCAAATTAAGCTAACTGGCC 59.239 45.455 17.03 0.00 44.87 5.36
1560 4096 5.814705 CAGAAAGTAAGTCCAGGCAATAGAG 59.185 44.000 0.00 0.00 0.00 2.43
1616 4152 6.916932 GCAAAACACCCTACACGTTATTAAAA 59.083 34.615 0.00 0.00 0.00 1.52
1621 4157 3.478509 TGCAAAACACCCTACACGTTAT 58.521 40.909 0.00 0.00 0.00 1.89
1762 4298 2.203280 TGAACCACTGCCCCGTTG 60.203 61.111 0.00 0.00 0.00 4.10
2001 4537 1.270465 TGTCCATATGCCGCAGATCAG 60.270 52.381 0.00 0.00 0.00 2.90
2104 4640 1.015868 CGTACTTCTCGACCTCCTCC 58.984 60.000 0.00 0.00 0.00 4.30
2146 4682 3.054878 CACGGTATCGGTAATGTAAGGC 58.945 50.000 0.00 0.00 41.39 4.35
2158 4694 3.942539 TTCATGAAATGCACGGTATCG 57.057 42.857 5.45 0.00 46.21 2.92
2221 4757 3.845781 ATGTCTAACATGGTAGCCTGG 57.154 47.619 13.26 0.00 37.45 4.45
2377 4913 3.305676 CGAGTGGGCGATGAAGAGAATAT 60.306 47.826 0.00 0.00 0.00 1.28
2378 4914 2.034685 CGAGTGGGCGATGAAGAGAATA 59.965 50.000 0.00 0.00 0.00 1.75
2463 5001 2.046285 CGTTGGGAATGGGCCAGAC 61.046 63.158 13.78 8.35 0.00 3.51
2792 5331 5.722263 CAAAGGCCACATTAAATCACATGA 58.278 37.500 5.01 0.00 0.00 3.07
2793 5332 4.330620 GCAAAGGCCACATTAAATCACATG 59.669 41.667 5.01 0.00 0.00 3.21
2796 5335 4.192429 AGCAAAGGCCACATTAAATCAC 57.808 40.909 5.01 0.00 42.56 3.06
2798 5337 3.934579 CCAAGCAAAGGCCACATTAAATC 59.065 43.478 5.01 0.00 42.56 2.17
2801 5340 1.001860 GCCAAGCAAAGGCCACATTAA 59.998 47.619 5.01 0.00 46.50 1.40
2803 5342 1.372307 GCCAAGCAAAGGCCACATT 59.628 52.632 5.01 0.00 46.50 2.71
2804 5343 3.062639 GCCAAGCAAAGGCCACAT 58.937 55.556 5.01 0.00 46.50 3.21
2810 5349 1.286880 CCGTCAAGCCAAGCAAAGG 59.713 57.895 0.00 0.00 0.00 3.11
2811 5350 0.385390 AACCGTCAAGCCAAGCAAAG 59.615 50.000 0.00 0.00 0.00 2.77
2830 5386 1.228769 ACCTACACCGGCAGAGACA 60.229 57.895 0.00 0.00 0.00 3.41
2839 5395 2.481449 GCCTCATACTTGACCTACACCG 60.481 54.545 0.00 0.00 0.00 4.94
2861 5417 3.931631 CTCCTCCCACCCAGGCAGA 62.932 68.421 0.00 0.00 35.39 4.26
3065 5704 4.852134 TTGGATTGAATCATATTGCCCG 57.148 40.909 7.56 0.00 0.00 6.13
3124 5763 1.623811 TGTCTGAACCCTAACTCCAGC 59.376 52.381 0.00 0.00 0.00 4.85
3136 5804 4.260170 AGCTTCATTGAGGATGTCTGAAC 58.740 43.478 0.00 0.00 37.06 3.18
3177 5846 1.981256 ACATTGGGTTGTGTCTCCAC 58.019 50.000 0.00 0.00 42.19 4.02
3201 5870 0.601558 GTCTTCGTGGCTCCAGTGTA 59.398 55.000 0.00 0.00 0.00 2.90
3202 5871 1.115930 AGTCTTCGTGGCTCCAGTGT 61.116 55.000 0.00 0.00 0.00 3.55
3204 5873 1.546476 CTTAGTCTTCGTGGCTCCAGT 59.454 52.381 0.00 0.00 0.00 4.00
3205 5874 1.134965 CCTTAGTCTTCGTGGCTCCAG 60.135 57.143 0.00 0.00 0.00 3.86
3206 5875 0.895530 CCTTAGTCTTCGTGGCTCCA 59.104 55.000 0.00 0.00 0.00 3.86
3208 5877 2.427453 TGATCCTTAGTCTTCGTGGCTC 59.573 50.000 0.00 0.00 0.00 4.70
3209 5878 2.428890 CTGATCCTTAGTCTTCGTGGCT 59.571 50.000 0.00 0.00 0.00 4.75
3224 5893 0.615331 TCAGCAACCCAGACTGATCC 59.385 55.000 3.32 0.00 35.58 3.36
3288 5976 7.457024 TTTTCAATCTCAAATCTGCATCTGA 57.543 32.000 0.00 0.00 0.00 3.27
3301 5989 5.723405 TGGAGAGGAGAGATTTTCAATCTCA 59.277 40.000 22.58 3.62 45.18 3.27
3314 6002 1.305381 AACCCCGTGGAGAGGAGAG 60.305 63.158 0.00 0.00 34.81 3.20
3316 6004 1.305381 AGAACCCCGTGGAGAGGAG 60.305 63.158 0.00 0.00 34.81 3.69
3317 6005 1.305046 GAGAACCCCGTGGAGAGGA 60.305 63.158 0.00 0.00 34.81 3.71
3318 6006 2.711922 CGAGAACCCCGTGGAGAGG 61.712 68.421 0.00 0.00 34.81 3.69
3344 6032 0.543277 AGGGCATTCGAGCATCTTCA 59.457 50.000 0.00 0.00 35.83 3.02
3396 6084 1.418637 TCCAGCGTATTTGATACCCCC 59.581 52.381 0.00 0.00 32.08 5.40
3460 6148 8.776376 AGATGGCTTTGTATTTTATTTTGTGG 57.224 30.769 0.00 0.00 0.00 4.17
3461 6149 9.643693 AGAGATGGCTTTGTATTTTATTTTGTG 57.356 29.630 0.00 0.00 0.00 3.33
3463 6151 8.598075 GCAGAGATGGCTTTGTATTTTATTTTG 58.402 33.333 0.00 0.00 0.00 2.44
3467 6155 6.830324 TCTGCAGAGATGGCTTTGTATTTTAT 59.170 34.615 13.74 0.00 0.00 1.40
3468 6156 6.179756 TCTGCAGAGATGGCTTTGTATTTTA 58.820 36.000 13.74 0.00 0.00 1.52
3476 6164 2.758979 CCAATTCTGCAGAGATGGCTTT 59.241 45.455 27.15 9.54 0.00 3.51
3481 6169 1.030457 GCCCCAATTCTGCAGAGATG 58.970 55.000 17.43 18.29 0.00 2.90
3493 6181 2.158385 TGTACTTGGTTGAAGCCCCAAT 60.158 45.455 0.00 0.00 39.86 3.16
3517 6205 5.276678 CGTTGGTTGAGTACAAGTTACAGTG 60.277 44.000 0.00 0.00 36.64 3.66
3522 6210 4.062677 AGCGTTGGTTGAGTACAAGTTA 57.937 40.909 0.00 0.00 36.64 2.24
3525 6213 3.386486 TGTAGCGTTGGTTGAGTACAAG 58.614 45.455 0.00 0.00 36.64 3.16
3531 6219 6.040247 TCTAACATATGTAGCGTTGGTTGAG 58.960 40.000 9.21 0.00 0.00 3.02
3554 6242 0.664761 CCATGCCCACATCGACATTC 59.335 55.000 0.00 0.00 32.87 2.67
3557 6245 2.438254 GCCATGCCCACATCGACA 60.438 61.111 0.00 0.00 32.87 4.35
3604 6292 6.933514 ATCCAGGCTTCTCCAAAATAAAAA 57.066 33.333 0.00 0.00 37.29 1.94
3605 6293 8.429237 TTTATCCAGGCTTCTCCAAAATAAAA 57.571 30.769 0.00 0.00 37.29 1.52
3606 6294 8.429237 TTTTATCCAGGCTTCTCCAAAATAAA 57.571 30.769 0.00 0.00 37.29 1.40
3607 6295 8.429237 TTTTTATCCAGGCTTCTCCAAAATAA 57.571 30.769 0.00 0.00 37.29 1.40
3608 6296 8.608185 ATTTTTATCCAGGCTTCTCCAAAATA 57.392 30.769 0.00 0.00 37.29 1.40
3609 6297 6.933514 TTTTTATCCAGGCTTCTCCAAAAT 57.066 33.333 0.00 0.00 37.29 1.82
3610 6298 6.933514 ATTTTTATCCAGGCTTCTCCAAAA 57.066 33.333 0.00 0.00 37.29 2.44
3611 6299 6.096846 GCTATTTTTATCCAGGCTTCTCCAAA 59.903 38.462 0.00 0.00 37.29 3.28
3612 6300 5.594317 GCTATTTTTATCCAGGCTTCTCCAA 59.406 40.000 0.00 0.00 37.29 3.53
3613 6301 5.133221 GCTATTTTTATCCAGGCTTCTCCA 58.867 41.667 0.00 0.00 37.29 3.86
3614 6302 5.133221 TGCTATTTTTATCCAGGCTTCTCC 58.867 41.667 0.00 0.00 0.00 3.71
3615 6303 6.699575 TTGCTATTTTTATCCAGGCTTCTC 57.300 37.500 0.00 0.00 0.00 2.87
3616 6304 5.068329 GCTTGCTATTTTTATCCAGGCTTCT 59.932 40.000 0.00 0.00 0.00 2.85
3617 6305 5.068329 AGCTTGCTATTTTTATCCAGGCTTC 59.932 40.000 0.00 0.00 35.69 3.86
3618 6306 4.958581 AGCTTGCTATTTTTATCCAGGCTT 59.041 37.500 0.00 0.00 35.69 4.35
3619 6307 4.540715 AGCTTGCTATTTTTATCCAGGCT 58.459 39.130 0.00 0.00 34.58 4.58
3620 6308 4.926140 AGCTTGCTATTTTTATCCAGGC 57.074 40.909 0.00 0.00 0.00 4.85
3645 6333 1.265905 GTCGAATGTCGGGTGCTTTTT 59.734 47.619 0.00 0.00 40.88 1.94
3646 6334 0.872388 GTCGAATGTCGGGTGCTTTT 59.128 50.000 0.00 0.00 40.88 2.27
3647 6335 0.034896 AGTCGAATGTCGGGTGCTTT 59.965 50.000 0.00 0.00 40.88 3.51
3648 6336 0.034896 AAGTCGAATGTCGGGTGCTT 59.965 50.000 0.00 0.00 40.88 3.91
3649 6337 0.389948 GAAGTCGAATGTCGGGTGCT 60.390 55.000 0.00 0.00 40.88 4.40
3650 6338 1.683790 CGAAGTCGAATGTCGGGTGC 61.684 60.000 8.77 0.00 40.88 5.01
3651 6339 2.359792 CGAAGTCGAATGTCGGGTG 58.640 57.895 8.77 0.00 40.88 4.61
3652 6340 4.883026 CGAAGTCGAATGTCGGGT 57.117 55.556 8.77 0.00 40.88 5.28
3655 6343 1.132199 CGTCCCGAAGTCGAATGTCG 61.132 60.000 1.43 9.42 43.02 4.35
3656 6344 0.169672 TCGTCCCGAAGTCGAATGTC 59.830 55.000 1.43 0.00 43.02 3.06
3657 6345 0.599558 TTCGTCCCGAAGTCGAATGT 59.400 50.000 1.43 0.00 41.05 2.71
3658 6346 0.989890 GTTCGTCCCGAAGTCGAATG 59.010 55.000 1.43 0.00 46.54 2.67
3659 6347 0.108945 GGTTCGTCCCGAAGTCGAAT 60.109 55.000 1.43 0.00 46.54 3.34
3660 6348 1.286880 GGTTCGTCCCGAAGTCGAA 59.713 57.895 1.43 4.09 46.54 3.71
3661 6349 1.859427 CTGGTTCGTCCCGAAGTCGA 61.859 60.000 1.43 0.00 46.54 4.20
3662 6350 1.443872 CTGGTTCGTCCCGAAGTCG 60.444 63.158 0.00 0.00 46.54 4.18
3663 6351 0.033090 AACTGGTTCGTCCCGAAGTC 59.967 55.000 0.00 0.00 46.54 3.01
3680 6368 3.395639 TGTAACGGAGTGATGAACCAAC 58.604 45.455 0.00 0.00 45.00 3.77
3692 6380 3.123621 GCTCTGACATGTTTGTAACGGAG 59.876 47.826 12.32 12.32 36.69 4.63
3698 6386 2.875672 GCTGGGCTCTGACATGTTTGTA 60.876 50.000 0.00 0.00 35.79 2.41
3706 6394 0.473755 TTTCAAGCTGGGCTCTGACA 59.526 50.000 0.00 0.00 38.25 3.58
3707 6395 1.268079 GTTTTCAAGCTGGGCTCTGAC 59.732 52.381 0.00 0.00 38.25 3.51
3709 6397 1.268899 CAGTTTTCAAGCTGGGCTCTG 59.731 52.381 0.00 0.00 38.25 3.35
3712 6400 1.799258 CGCAGTTTTCAAGCTGGGCT 61.799 55.000 7.38 0.00 41.60 5.19
3728 6416 1.872952 CACCTGTTGAGATTTGACGCA 59.127 47.619 0.00 0.00 0.00 5.24
3732 6420 2.618241 GCACACACCTGTTGAGATTTGA 59.382 45.455 0.00 0.00 0.00 2.69
3742 6430 3.769739 TTTCTATCTGCACACACCTGT 57.230 42.857 0.00 0.00 0.00 4.00
3747 6435 3.814625 TGTGGTTTTCTATCTGCACACA 58.185 40.909 0.00 0.00 35.49 3.72
3748 6436 4.537015 GTTGTGGTTTTCTATCTGCACAC 58.463 43.478 0.00 0.00 0.00 3.82
3753 6441 5.063204 TGAGTGGTTGTGGTTTTCTATCTG 58.937 41.667 0.00 0.00 0.00 2.90
3760 6448 4.676723 CGTTCAATGAGTGGTTGTGGTTTT 60.677 41.667 0.00 0.00 0.00 2.43
3761 6449 3.181491 CGTTCAATGAGTGGTTGTGGTTT 60.181 43.478 0.00 0.00 0.00 3.27
3764 6452 1.266718 CCGTTCAATGAGTGGTTGTGG 59.733 52.381 0.00 0.00 0.00 4.17
3769 6457 0.108585 AGTGCCGTTCAATGAGTGGT 59.891 50.000 5.04 0.00 0.00 4.16
3778 6466 3.428999 GCTATTGTCTCTAGTGCCGTTCA 60.429 47.826 0.00 0.00 0.00 3.18
3779 6467 3.117046 GCTATTGTCTCTAGTGCCGTTC 58.883 50.000 0.00 0.00 0.00 3.95
3805 6501 1.215647 CGGCTTCTACGGCAGTTCT 59.784 57.895 0.00 0.00 0.00 3.01
3838 6534 3.714391 ACCACTCTTTCGTAGTTGTGTC 58.286 45.455 0.00 0.00 32.05 3.67
3844 6540 7.516198 TTTCTAACTACCACTCTTTCGTAGT 57.484 36.000 0.00 0.00 43.44 2.73
3850 6546 9.384764 GATGCTAATTTCTAACTACCACTCTTT 57.615 33.333 0.00 0.00 0.00 2.52
3860 6556 5.007385 ACGACCGATGCTAATTTCTAACT 57.993 39.130 0.00 0.00 0.00 2.24
3877 6573 1.557651 GGACGAGCTTGAATACGACC 58.442 55.000 8.31 1.70 34.36 4.79
3890 8942 1.087771 GGCCAATTACACCGGACGAG 61.088 60.000 9.46 0.00 0.00 4.18
3920 8972 8.478775 ACAAGAAATCCATCATCATCATCATT 57.521 30.769 0.00 0.00 0.00 2.57
3927 8979 7.560262 AGATGTTGACAAGAAATCCATCATCAT 59.440 33.333 13.56 0.00 37.81 2.45
3928 8980 6.888088 AGATGTTGACAAGAAATCCATCATCA 59.112 34.615 13.56 0.00 37.81 3.07
3929 8981 7.330900 AGATGTTGACAAGAAATCCATCATC 57.669 36.000 13.56 8.46 36.63 2.92
3930 8982 7.177921 ACAAGATGTTGACAAGAAATCCATCAT 59.822 33.333 9.96 2.90 37.10 2.45
3931 8983 6.491062 ACAAGATGTTGACAAGAAATCCATCA 59.509 34.615 9.96 0.00 37.10 3.07
3932 8984 6.805271 CACAAGATGTTGACAAGAAATCCATC 59.195 38.462 9.96 6.23 37.10 3.51
3933 8985 6.491062 TCACAAGATGTTGACAAGAAATCCAT 59.509 34.615 9.96 0.00 37.10 3.41
3934 8986 5.827267 TCACAAGATGTTGACAAGAAATCCA 59.173 36.000 9.96 0.00 37.10 3.41
3935 8987 6.317789 TCACAAGATGTTGACAAGAAATCC 57.682 37.500 9.96 0.00 37.10 3.01
3936 8988 8.725148 ACTATCACAAGATGTTGACAAGAAATC 58.275 33.333 9.96 0.00 37.10 2.17
3937 8989 8.627208 ACTATCACAAGATGTTGACAAGAAAT 57.373 30.769 9.96 0.00 37.10 2.17
3938 8990 9.725019 ATACTATCACAAGATGTTGACAAGAAA 57.275 29.630 9.96 0.00 37.10 2.52
3939 8991 9.725019 AATACTATCACAAGATGTTGACAAGAA 57.275 29.630 9.96 0.00 37.10 2.52
3940 8992 9.725019 AAATACTATCACAAGATGTTGACAAGA 57.275 29.630 9.96 2.40 37.10 3.02
3967 9019 9.997482 GAGAAAGACACTATTACAACAACAAAA 57.003 29.630 0.00 0.00 0.00 2.44
3968 9020 9.168451 TGAGAAAGACACTATTACAACAACAAA 57.832 29.630 0.00 0.00 0.00 2.83
3969 9021 8.725405 TGAGAAAGACACTATTACAACAACAA 57.275 30.769 0.00 0.00 0.00 2.83
3970 9022 8.902540 ATGAGAAAGACACTATTACAACAACA 57.097 30.769 0.00 0.00 0.00 3.33


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.