Multiple sequence alignment - TraesCS4B01G036900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G036900 chr4B 100.000 5355 0 0 1 5355 26663252 26668606 0.000000e+00 9889.0
1 TraesCS4B01G036900 chr4B 76.289 388 86 5 322 704 143306222 143305836 9.090000e-48 202.0
2 TraesCS4B01G036900 chr4A 89.071 1830 112 34 899 2663 584973430 584971624 0.000000e+00 2191.0
3 TraesCS4B01G036900 chr4A 92.042 1156 48 20 3495 4626 584970797 584969662 0.000000e+00 1585.0
4 TraesCS4B01G036900 chr4A 85.839 918 104 8 1 902 584993372 584992465 0.000000e+00 952.0
5 TraesCS4B01G036900 chr4A 89.703 505 48 4 2707 3207 584971629 584971125 4.520000e-180 641.0
6 TraesCS4B01G036900 chr4A 92.179 179 12 1 4868 5046 672526427 672526251 8.900000e-63 252.0
7 TraesCS4B01G036900 chr4A 92.265 181 9 3 4868 5047 714788691 714788515 8.900000e-63 252.0
8 TraesCS4B01G036900 chr4A 89.444 180 17 2 4868 5046 574506896 574507074 5.400000e-55 226.0
9 TraesCS4B01G036900 chr4A 82.969 229 21 14 5132 5355 584967217 584967002 1.970000e-44 191.0
10 TraesCS4B01G036900 chr4A 89.041 146 16 0 3262 3407 584970969 584970824 1.180000e-41 182.0
11 TraesCS4B01G036900 chr4A 88.889 81 5 3 4789 4866 574506665 574506744 4.410000e-16 97.1
12 TraesCS4B01G036900 chr4A 88.750 80 5 3 4788 4866 714788918 714788842 1.590000e-15 95.3
13 TraesCS4B01G036900 chr4A 86.047 86 7 5 4785 4867 672526662 672526579 2.660000e-13 87.9
14 TraesCS4B01G036900 chr4A 94.118 51 3 0 4665 4715 584969057 584969007 1.600000e-10 78.7
15 TraesCS4B01G036900 chr4A 100.000 33 0 0 4626 4658 584969589 584969557 1.610000e-05 62.1
16 TraesCS4B01G036900 chr4D 89.148 1456 69 38 934 2337 15593350 15594768 0.000000e+00 1731.0
17 TraesCS4B01G036900 chr4D 93.568 1166 43 12 3495 4658 15598632 15599767 0.000000e+00 1709.0
18 TraesCS4B01G036900 chr4D 88.404 940 92 10 1 924 15592223 15593161 0.000000e+00 1116.0
19 TraesCS4B01G036900 chr4D 89.858 424 37 6 2707 3128 15597884 15598303 1.700000e-149 540.0
20 TraesCS4B01G036900 chr4D 92.355 327 25 0 2337 2663 15597563 15597889 2.920000e-127 466.0
21 TraesCS4B01G036900 chr4D 93.363 226 13 2 5132 5355 15600206 15600431 3.090000e-87 333.0
22 TraesCS4B01G036900 chr4D 89.041 146 16 0 3262 3407 15598460 15598605 1.180000e-41 182.0
23 TraesCS4B01G036900 chr4D 87.640 89 6 4 4794 4880 80885488 80885403 1.230000e-16 99.0
24 TraesCS4B01G036900 chr5D 75.274 639 134 14 301 924 541810943 541810314 3.160000e-72 283.0
25 TraesCS4B01G036900 chr5D 76.618 479 76 21 329 802 379798196 379797749 1.160000e-56 231.0
26 TraesCS4B01G036900 chr5D 100.000 28 0 0 5069 5096 180468243 180468216 1.000000e-02 52.8
27 TraesCS4B01G036900 chr1D 76.208 559 109 18 295 839 251979949 251979401 1.900000e-69 274.0
28 TraesCS4B01G036900 chr1D 75.154 487 105 7 321 795 222898714 222898232 1.170000e-51 215.0
29 TraesCS4B01G036900 chr1D 76.393 377 84 5 300 673 479536654 479536280 1.180000e-46 198.0
30 TraesCS4B01G036900 chr5A 77.358 477 74 20 329 802 480294336 480293891 8.900000e-63 252.0
31 TraesCS4B01G036900 chr5A 89.583 48 0 2 5049 5096 211618041 211617999 7.490000e-04 56.5
32 TraesCS4B01G036900 chr7B 92.000 175 11 2 4872 5046 490241044 490240873 5.360000e-60 243.0
33 TraesCS4B01G036900 chr7B 88.889 90 5 5 4779 4866 162921771 162921857 7.340000e-19 106.0
34 TraesCS4B01G036900 chr7B 87.805 82 7 2 4787 4866 648100591 648100511 5.710000e-15 93.5
35 TraesCS4B01G036900 chr1B 89.583 192 15 3 4868 5056 654025774 654025585 6.930000e-59 239.0
36 TraesCS4B01G036900 chr1B 74.597 559 123 14 295 839 362052783 362053336 1.500000e-55 228.0
37 TraesCS4B01G036900 chr1B 92.000 75 3 3 4787 4859 151096879 151096952 9.490000e-18 102.0
38 TraesCS4B01G036900 chr1B 100.000 28 0 0 5069 5096 3906782 3906755 1.000000e-02 52.8
39 TraesCS4B01G036900 chr6B 90.556 180 11 4 4868 5047 159399699 159399872 3.220000e-57 233.0
40 TraesCS4B01G036900 chr6B 87.805 82 6 4 4787 4866 159399469 159399548 5.710000e-15 93.5
41 TraesCS4B01G036900 chr6B 96.875 32 1 0 5065 5096 703413947 703413916 3.000000e-03 54.7
42 TraesCS4B01G036900 chr3B 90.556 180 11 3 4868 5047 559909739 559909566 3.220000e-57 233.0
43 TraesCS4B01G036900 chr3B 90.164 183 13 2 4868 5050 687791177 687791000 3.220000e-57 233.0
44 TraesCS4B01G036900 chr3B 89.305 187 13 5 4868 5052 803964250 803964069 1.500000e-55 228.0
45 TraesCS4B01G036900 chr3B 87.952 83 5 4 4787 4866 803964481 803964401 5.710000e-15 93.5
46 TraesCS4B01G036900 chr6D 75.351 499 105 9 311 795 6830594 6831088 1.940000e-54 224.0
47 TraesCS4B01G036900 chr3D 77.062 388 81 6 320 704 442748606 442748224 3.250000e-52 217.0
48 TraesCS4B01G036900 chr7D 73.652 649 132 23 276 903 636717641 636717011 1.170000e-51 215.0
49 TraesCS4B01G036900 chr7D 100.000 30 0 0 5069 5098 109929757 109929728 7.490000e-04 56.5
50 TraesCS4B01G036900 chr5B 74.545 495 104 11 316 795 319316131 319315644 4.230000e-46 196.0
51 TraesCS4B01G036900 chr5B 100.000 29 0 0 5067 5095 494321440 494321468 3.000000e-03 54.7
52 TraesCS4B01G036900 chr2B 89.362 47 3 2 5061 5105 382246464 382246510 2.080000e-04 58.4
53 TraesCS4B01G036900 chr1A 94.737 38 0 2 5069 5105 531886365 531886401 2.080000e-04 58.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G036900 chr4B 26663252 26668606 5354 False 9889.000000 9889 100.000000 1 5355 1 chr4B.!!$F1 5354
1 TraesCS4B01G036900 chr4A 584992465 584993372 907 True 952.000000 952 85.839000 1 902 1 chr4A.!!$R1 901
2 TraesCS4B01G036900 chr4A 584967002 584973430 6428 True 704.400000 2191 90.992000 899 5355 7 chr4A.!!$R2 4456
3 TraesCS4B01G036900 chr4D 15592223 15600431 8208 False 868.142857 1731 90.819571 1 5355 7 chr4D.!!$F1 5354
4 TraesCS4B01G036900 chr5D 541810314 541810943 629 True 283.000000 283 75.274000 301 924 1 chr5D.!!$R3 623
5 TraesCS4B01G036900 chr1D 251979401 251979949 548 True 274.000000 274 76.208000 295 839 1 chr1D.!!$R2 544
6 TraesCS4B01G036900 chr1B 362052783 362053336 553 False 228.000000 228 74.597000 295 839 1 chr1B.!!$F2 544
7 TraesCS4B01G036900 chr7D 636717011 636717641 630 True 215.000000 215 73.652000 276 903 1 chr7D.!!$R2 627

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
849 888 0.584396 CTTTATTATTCGGCGCCGCA 59.416 50.0 42.78 35.07 39.59 5.69 F
1886 2186 0.109723 TTTGGGACGAGGGGAAAGTG 59.890 55.0 0.00 0.00 0.00 3.16 F
1989 2291 0.318699 GGTGGTTTCAGCCTTTTCGC 60.319 55.0 0.00 0.00 35.51 4.70 F
2580 5686 0.741221 GCTGGTTGCTTCGGTAGGAG 60.741 60.0 0.00 0.00 38.95 3.69 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1969 2271 0.040425 CGAAAAGGCTGAAACCACCG 60.040 55.000 0.0 0.00 0.00 4.94 R
3524 6784 0.112995 AAATCTGCTGGAGGTTGGCA 59.887 50.000 0.0 0.00 34.66 4.92 R
3527 6787 2.507484 TCACAAATCTGCTGGAGGTTG 58.493 47.619 0.0 3.97 0.00 3.77 R
4495 7775 0.896923 TGGATGCCCAAAACATGAGC 59.103 50.000 0.0 0.00 40.09 4.26 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
126 128 2.807967 TGAAAACACATCAGAAGCTCGG 59.192 45.455 0.00 0.00 0.00 4.63
313 330 6.668323 CACATACATTCAAGACCGAAAAACT 58.332 36.000 0.00 0.00 0.00 2.66
325 342 2.162681 CGAAAAACTCCTGGGCTTGAT 58.837 47.619 0.00 0.00 0.00 2.57
341 359 1.344065 TGATACCAACACCCGTCACT 58.656 50.000 0.00 0.00 0.00 3.41
421 439 1.341209 TGAGCTCGACGCATATCCATT 59.659 47.619 9.64 0.00 42.61 3.16
444 462 4.142838 TGTTGATATGCAGCTTTTCAGACG 60.143 41.667 0.00 0.00 0.00 4.18
447 465 0.792640 ATGCAGCTTTTCAGACGTCG 59.207 50.000 10.46 5.48 0.00 5.12
454 472 4.208460 CAGCTTTTCAGACGTCGAAAGTAA 59.792 41.667 27.14 17.12 34.07 2.24
491 512 7.237173 CGAAGTCATTGTCACTAAAAGAATCC 58.763 38.462 0.00 0.00 0.00 3.01
580 605 1.215423 GGAGGAAACCATACCTGCCAT 59.785 52.381 0.00 0.00 38.41 4.40
670 696 1.686110 CGCCCCTCAACTACCTCCT 60.686 63.158 0.00 0.00 0.00 3.69
673 699 2.193993 GCCCCTCAACTACCTCCTAAA 58.806 52.381 0.00 0.00 0.00 1.85
680 707 1.875488 ACTACCTCCTAAACCCGCAT 58.125 50.000 0.00 0.00 0.00 4.73
802 841 1.039068 CATCACCCACCAACAAGCAA 58.961 50.000 0.00 0.00 0.00 3.91
849 888 0.584396 CTTTATTATTCGGCGCCGCA 59.416 50.000 42.78 35.07 39.59 5.69
859 898 4.645921 GCGCCGCAGTTGCCTTTT 62.646 61.111 3.15 0.00 37.91 2.27
862 901 2.650778 CCGCAGTTGCCTTTTCCC 59.349 61.111 0.00 0.00 37.91 3.97
868 907 0.750249 AGTTGCCTTTTCCCAAACCG 59.250 50.000 0.00 0.00 0.00 4.44
884 923 3.154952 CGTGACGTCGAACGACCG 61.155 66.667 20.20 16.16 46.05 4.79
1124 1357 2.820037 GCCACCTACCTGCTTCGC 60.820 66.667 0.00 0.00 0.00 4.70
1305 1559 3.703127 GGAGGTTCGAGGGCGGTT 61.703 66.667 0.00 0.00 38.28 4.44
1432 1698 1.649271 ATCATCTCCAAGGTGCCCCC 61.649 60.000 0.00 0.00 0.00 5.40
1454 1720 3.358824 CCCCATGCCCTTCCCCTT 61.359 66.667 0.00 0.00 0.00 3.95
1455 1721 2.280079 CCCATGCCCTTCCCCTTC 59.720 66.667 0.00 0.00 0.00 3.46
1456 1722 2.280079 CCATGCCCTTCCCCTTCC 59.720 66.667 0.00 0.00 0.00 3.46
1457 1723 2.280079 CATGCCCTTCCCCTTCCC 59.720 66.667 0.00 0.00 0.00 3.97
1458 1724 3.420482 ATGCCCTTCCCCTTCCCG 61.420 66.667 0.00 0.00 0.00 5.14
1462 1728 3.798511 CCTTCCCCTTCCCGGCTC 61.799 72.222 0.00 0.00 0.00 4.70
1463 1729 2.689034 CTTCCCCTTCCCGGCTCT 60.689 66.667 0.00 0.00 0.00 4.09
1464 1730 2.687566 TTCCCCTTCCCGGCTCTC 60.688 66.667 0.00 0.00 0.00 3.20
1635 1907 1.133809 TAAGTGTGCCCTTCCCTGCT 61.134 55.000 0.00 0.00 0.00 4.24
1652 1924 3.277715 CTGCTCCTTGATTTCTTCCTCC 58.722 50.000 0.00 0.00 0.00 4.30
1653 1925 2.644299 TGCTCCTTGATTTCTTCCTCCA 59.356 45.455 0.00 0.00 0.00 3.86
1657 1929 4.911390 TCCTTGATTTCTTCCTCCACTTC 58.089 43.478 0.00 0.00 0.00 3.01
1658 1930 4.013050 CCTTGATTTCTTCCTCCACTTCC 58.987 47.826 0.00 0.00 0.00 3.46
1659 1931 4.263683 CCTTGATTTCTTCCTCCACTTCCT 60.264 45.833 0.00 0.00 0.00 3.36
1660 1932 4.292186 TGATTTCTTCCTCCACTTCCTG 57.708 45.455 0.00 0.00 0.00 3.86
1661 1933 3.909995 TGATTTCTTCCTCCACTTCCTGA 59.090 43.478 0.00 0.00 0.00 3.86
1663 1935 5.014544 TGATTTCTTCCTCCACTTCCTGAAT 59.985 40.000 0.00 0.00 0.00 2.57
1809 2086 0.320374 CCTGCTCCGTTCTACAACCA 59.680 55.000 0.00 0.00 0.00 3.67
1831 2108 5.005740 CACCAAGAACAATGAGGAATCTGA 58.994 41.667 0.00 0.00 0.00 3.27
1859 2158 1.742768 GCTGCTACTCGTAGGCCAT 59.257 57.895 5.01 0.00 33.87 4.40
1886 2186 0.109723 TTTGGGACGAGGGGAAAGTG 59.890 55.000 0.00 0.00 0.00 3.16
1891 2191 1.555533 GGACGAGGGGAAAGTGAATCT 59.444 52.381 0.00 0.00 0.00 2.40
1969 2271 3.441500 AGAATCCAAGGGACAAGGAAC 57.558 47.619 0.00 0.00 37.12 3.62
1989 2291 0.318699 GGTGGTTTCAGCCTTTTCGC 60.319 55.000 0.00 0.00 35.51 4.70
2071 2373 5.774690 AGACATTCTGAACCTGCCAAATAAA 59.225 36.000 0.00 0.00 0.00 1.40
2072 2374 6.267471 AGACATTCTGAACCTGCCAAATAAAA 59.733 34.615 0.00 0.00 0.00 1.52
2115 2417 2.825836 CAGGCTGGTTCCGATGCC 60.826 66.667 6.61 10.64 45.21 4.40
2137 2445 5.279506 GCCGATTCTAACATTCTCCATCCTA 60.280 44.000 0.00 0.00 0.00 2.94
2167 2476 4.081420 ACTGACTTCCGATGCAGTCTTAAT 60.081 41.667 0.00 0.00 40.24 1.40
2195 2504 6.299805 TCTACTTGCATGAATAACACTCCT 57.700 37.500 6.60 0.00 0.00 3.69
2207 2516 8.506168 TGAATAACACTCCTTATGTTTGATCC 57.494 34.615 0.00 0.00 40.68 3.36
2221 2530 1.644509 TGATCCCCTATGTGATCCCG 58.355 55.000 0.00 0.00 37.23 5.14
2223 2532 1.550976 GATCCCCTATGTGATCCCGAC 59.449 57.143 0.00 0.00 32.92 4.79
2356 5462 1.342975 ACCTTCAGGGCCAGTTTGTTT 60.343 47.619 6.18 0.00 40.27 2.83
2357 5463 1.762370 CCTTCAGGGCCAGTTTGTTTT 59.238 47.619 6.18 0.00 0.00 2.43
2397 5503 9.665264 CTATTTCACAACTCACCTAAACTTTTC 57.335 33.333 0.00 0.00 0.00 2.29
2559 5665 5.534407 TGACTCTTGTTCGCTATTTACACA 58.466 37.500 0.00 0.00 0.00 3.72
2580 5686 0.741221 GCTGGTTGCTTCGGTAGGAG 60.741 60.000 0.00 0.00 38.95 3.69
2594 5700 2.420705 GTAGGAGAGGAGTAGGGGAGA 58.579 57.143 0.00 0.00 0.00 3.71
2596 5702 1.228190 GGAGAGGAGTAGGGGAGAGT 58.772 60.000 0.00 0.00 0.00 3.24
2625 5731 2.158325 AGAAGCCATTGGGGTCAAAGAA 60.158 45.455 4.53 0.00 46.38 2.52
2627 5733 1.428912 AGCCATTGGGGTCAAAGAAGA 59.571 47.619 4.53 0.00 42.56 2.87
2634 5740 1.272147 GGGGTCAAAGAAGATGCCACT 60.272 52.381 0.00 0.00 0.00 4.00
2638 5744 3.190118 GGTCAAAGAAGATGCCACTTCAG 59.810 47.826 17.81 9.98 45.83 3.02
2648 5754 5.181748 AGATGCCACTTCAGTCAGAATTAC 58.818 41.667 0.00 0.00 35.25 1.89
2652 5758 4.033358 GCCACTTCAGTCAGAATTACATCG 59.967 45.833 0.00 0.00 35.25 3.84
2657 5763 3.134623 TCAGTCAGAATTACATCGCCCAT 59.865 43.478 0.00 0.00 0.00 4.00
2658 5764 3.249320 CAGTCAGAATTACATCGCCCATG 59.751 47.826 0.00 0.00 38.64 3.66
2659 5765 3.134623 AGTCAGAATTACATCGCCCATGA 59.865 43.478 0.00 0.00 36.21 3.07
2660 5766 4.067896 GTCAGAATTACATCGCCCATGAT 58.932 43.478 0.00 0.00 36.21 2.45
2661 5767 5.012046 AGTCAGAATTACATCGCCCATGATA 59.988 40.000 0.00 0.00 36.21 2.15
2662 5768 5.349817 GTCAGAATTACATCGCCCATGATAG 59.650 44.000 0.00 0.00 36.21 2.08
2663 5769 5.245977 TCAGAATTACATCGCCCATGATAGA 59.754 40.000 0.00 0.00 36.21 1.98
2664 5770 6.070596 TCAGAATTACATCGCCCATGATAGAT 60.071 38.462 0.00 0.00 36.21 1.98
2665 5771 6.257411 CAGAATTACATCGCCCATGATAGATC 59.743 42.308 0.00 0.00 36.21 2.75
2666 5772 5.946942 ATTACATCGCCCATGATAGATCT 57.053 39.130 0.00 0.00 36.21 2.75
2667 5773 5.745312 TTACATCGCCCATGATAGATCTT 57.255 39.130 0.00 0.00 36.21 2.40
2668 5774 4.199432 ACATCGCCCATGATAGATCTTC 57.801 45.455 0.00 0.00 36.21 2.87
2669 5775 3.055530 ACATCGCCCATGATAGATCTTCC 60.056 47.826 0.00 0.00 36.21 3.46
2670 5776 2.894731 TCGCCCATGATAGATCTTCCT 58.105 47.619 0.00 0.00 0.00 3.36
2671 5777 3.242867 TCGCCCATGATAGATCTTCCTT 58.757 45.455 0.00 0.00 0.00 3.36
2672 5778 3.648067 TCGCCCATGATAGATCTTCCTTT 59.352 43.478 0.00 0.00 0.00 3.11
2673 5779 4.838423 TCGCCCATGATAGATCTTCCTTTA 59.162 41.667 0.00 0.00 0.00 1.85
2674 5780 5.047021 TCGCCCATGATAGATCTTCCTTTAG 60.047 44.000 0.00 0.00 0.00 1.85
2675 5781 5.279708 CGCCCATGATAGATCTTCCTTTAGT 60.280 44.000 0.00 0.00 0.00 2.24
2676 5782 5.936956 GCCCATGATAGATCTTCCTTTAGTG 59.063 44.000 0.00 0.00 0.00 2.74
2677 5783 6.239714 GCCCATGATAGATCTTCCTTTAGTGA 60.240 42.308 0.00 0.00 0.00 3.41
2678 5784 7.528543 GCCCATGATAGATCTTCCTTTAGTGAT 60.529 40.741 0.00 0.00 0.00 3.06
2679 5785 8.040132 CCCATGATAGATCTTCCTTTAGTGATC 58.960 40.741 0.00 0.00 36.51 2.92
2680 5786 7.758980 CCATGATAGATCTTCCTTTAGTGATCG 59.241 40.741 0.00 0.00 39.93 3.69
2681 5787 8.518702 CATGATAGATCTTCCTTTAGTGATCGA 58.481 37.037 0.00 0.00 39.93 3.59
2682 5788 8.465273 TGATAGATCTTCCTTTAGTGATCGAA 57.535 34.615 0.00 0.00 39.93 3.71
2683 5789 8.914011 TGATAGATCTTCCTTTAGTGATCGAAA 58.086 33.333 0.00 0.00 39.93 3.46
2684 5790 9.751542 GATAGATCTTCCTTTAGTGATCGAAAA 57.248 33.333 0.00 0.00 39.93 2.29
2728 5834 4.482952 AATAGTTTAGGTGCCTTACGCT 57.517 40.909 0.00 0.00 38.78 5.07
2819 5926 4.838986 TCCTGAGCTTAACTCTGTTACCTT 59.161 41.667 0.00 0.00 46.41 3.50
2821 5928 6.495872 TCCTGAGCTTAACTCTGTTACCTTAA 59.504 38.462 0.00 0.00 46.41 1.85
2834 5941 9.240734 CTCTGTTACCTTAAGTCTCCTTAACTA 57.759 37.037 0.97 0.00 38.05 2.24
2835 5942 9.765295 TCTGTTACCTTAAGTCTCCTTAACTAT 57.235 33.333 0.97 0.00 38.05 2.12
2858 5965 4.804868 TGATGTATTGGCAAAGCACATT 57.195 36.364 19.81 9.28 29.51 2.71
2878 5986 6.591062 CACATTAAAAATACATTGGCAGTGCT 59.409 34.615 16.11 0.00 0.00 4.40
2890 5998 2.304470 TGGCAGTGCTCTGTTACCATTA 59.696 45.455 16.11 0.00 43.05 1.90
2894 6002 5.105756 GGCAGTGCTCTGTTACCATTAAAAT 60.106 40.000 16.11 0.00 43.05 1.82
2900 6008 6.599244 TGCTCTGTTACCATTAAAATGAGAGG 59.401 38.462 14.94 0.00 38.70 3.69
2902 6010 7.121315 GCTCTGTTACCATTAAAATGAGAGGTT 59.879 37.037 14.94 0.00 38.70 3.50
2924 6032 4.574674 TGATCTGGGTCATTAAACTGCT 57.425 40.909 0.00 0.00 0.00 4.24
2938 6048 7.439356 TCATTAAACTGCTATCAAGATCTTCCG 59.561 37.037 4.57 0.00 0.00 4.30
2948 6058 5.914898 TCAAGATCTTCCGTCAGATACAA 57.085 39.130 4.57 0.00 33.36 2.41
2954 6064 4.014406 TCTTCCGTCAGATACAACAGCTA 58.986 43.478 0.00 0.00 0.00 3.32
2973 6083 5.933463 CAGCTATCTCCTCAATTTGGATCTC 59.067 44.000 0.00 0.00 32.56 2.75
3003 6113 1.683917 CTCATCCCTAACCAGGAGACG 59.316 57.143 0.00 0.00 45.91 4.18
3006 6116 1.553706 TCCCTAACCAGGAGACGAAC 58.446 55.000 0.00 0.00 45.91 3.95
3011 6121 2.457366 AACCAGGAGACGAACATGAC 57.543 50.000 0.00 0.00 0.00 3.06
3035 6145 3.485877 GCTTAGTCATAGGCAGCAAAACG 60.486 47.826 0.00 0.00 34.27 3.60
3044 6154 1.268743 GGCAGCAAAACGCATATCTCC 60.269 52.381 0.00 0.00 46.13 3.71
3045 6155 1.401552 GCAGCAAAACGCATATCTCCA 59.598 47.619 0.00 0.00 46.13 3.86
3046 6156 2.159393 GCAGCAAAACGCATATCTCCAA 60.159 45.455 0.00 0.00 46.13 3.53
3068 6178 7.656948 TCCAAAGGCTTTGAAAAGAAATACATG 59.343 33.333 35.18 16.53 43.26 3.21
3083 6193 7.921304 AGAAATACATGCCTGACATATCCATA 58.079 34.615 0.00 0.00 36.64 2.74
3084 6194 8.045507 AGAAATACATGCCTGACATATCCATAG 58.954 37.037 0.00 0.00 36.64 2.23
3100 6210 4.201657 TCCATAGATTGCCACTGTGAATG 58.798 43.478 9.86 0.00 0.00 2.67
3153 6263 8.532977 AATTGATGGTTATTTTCCAAACTTCG 57.467 30.769 0.00 0.00 38.52 3.79
3157 6267 4.888239 TGGTTATTTTCCAAACTTCGGACA 59.112 37.500 0.00 0.00 30.29 4.02
3158 6268 5.360144 TGGTTATTTTCCAAACTTCGGACAA 59.640 36.000 0.00 0.00 30.29 3.18
3159 6269 5.918576 GGTTATTTTCCAAACTTCGGACAAG 59.081 40.000 0.00 0.00 30.29 3.16
3167 6277 1.296715 CTTCGGACAAGGTGGGGAG 59.703 63.158 0.00 0.00 0.00 4.30
3168 6278 2.804828 CTTCGGACAAGGTGGGGAGC 62.805 65.000 0.00 0.00 0.00 4.70
3184 6294 1.001406 GGAGCGTCTATCCCTCAATGG 59.999 57.143 0.00 0.00 0.00 3.16
3187 6297 1.270358 GCGTCTATCCCTCAATGGACC 60.270 57.143 0.00 0.00 37.20 4.46
3211 6403 7.775561 ACCAAGAAATGAGAAACAAGTAGTTCT 59.224 33.333 0.00 0.00 40.26 3.01
3229 6421 4.514441 AGTTCTCAGTTGCAATCTTGTGAG 59.486 41.667 0.59 10.35 32.18 3.51
3230 6422 4.341366 TCTCAGTTGCAATCTTGTGAGA 57.659 40.909 17.40 17.40 35.52 3.27
3231 6423 4.707105 TCTCAGTTGCAATCTTGTGAGAA 58.293 39.130 18.32 8.52 35.20 2.87
3243 6435 7.359933 GCAATCTTGTGAGAACTGACTTTCTAG 60.360 40.741 0.00 0.00 35.90 2.43
3244 6436 6.961360 TCTTGTGAGAACTGACTTTCTAGA 57.039 37.500 0.00 0.00 35.90 2.43
3247 6439 8.516234 TCTTGTGAGAACTGACTTTCTAGATAC 58.484 37.037 0.00 0.00 35.90 2.24
3248 6440 7.761038 TGTGAGAACTGACTTTCTAGATACA 57.239 36.000 0.00 0.00 35.90 2.29
3249 6441 7.821652 TGTGAGAACTGACTTTCTAGATACAG 58.178 38.462 0.00 4.11 35.90 2.74
3250 6442 7.665974 TGTGAGAACTGACTTTCTAGATACAGA 59.334 37.037 16.88 0.00 35.90 3.41
3251 6443 8.181573 GTGAGAACTGACTTTCTAGATACAGAG 58.818 40.741 16.88 5.47 35.90 3.35
3254 6446 8.519526 AGAACTGACTTTCTAGATACAGAGTTG 58.480 37.037 16.88 7.47 33.89 3.16
3255 6447 6.626302 ACTGACTTTCTAGATACAGAGTTGC 58.374 40.000 16.88 0.00 0.00 4.17
3256 6448 6.209589 ACTGACTTTCTAGATACAGAGTTGCA 59.790 38.462 16.88 0.00 0.00 4.08
3257 6449 6.390721 TGACTTTCTAGATACAGAGTTGCAC 58.609 40.000 0.00 0.00 0.00 4.57
3258 6450 6.015434 TGACTTTCTAGATACAGAGTTGCACA 60.015 38.462 0.00 0.00 0.00 4.57
3259 6451 6.159988 ACTTTCTAGATACAGAGTTGCACAC 58.840 40.000 0.00 0.00 0.00 3.82
3260 6452 5.722021 TTCTAGATACAGAGTTGCACACA 57.278 39.130 0.00 0.00 0.00 3.72
3289 6549 6.701340 TCTGTGCAACTATTGACTTGATAGT 58.299 36.000 0.00 0.00 40.96 2.12
3290 6550 6.813649 TCTGTGCAACTATTGACTTGATAGTC 59.186 38.462 0.00 0.00 44.14 2.59
3302 6562 5.947443 GACTTGATAGTCTGCAATTTTGCT 58.053 37.500 15.64 0.00 46.70 3.91
3303 6563 5.798934 GACTTGATAGTCTGCAATTTTGCTG 59.201 40.000 15.64 14.76 46.70 4.41
3372 6632 7.182817 TGTGTGGTACTCTGCTCTTTAATAT 57.817 36.000 0.00 0.00 0.00 1.28
3373 6633 8.301252 TGTGTGGTACTCTGCTCTTTAATATA 57.699 34.615 0.00 0.00 0.00 0.86
3375 6635 8.414778 GTGTGGTACTCTGCTCTTTAATATACT 58.585 37.037 0.00 0.00 0.00 2.12
3407 6667 4.578928 ACATTTTAGTGCTTTCTTCACCGT 59.421 37.500 0.00 0.00 35.14 4.83
3409 6669 4.806342 TTTAGTGCTTTCTTCACCGTTC 57.194 40.909 0.00 0.00 35.14 3.95
3410 6670 2.325583 AGTGCTTTCTTCACCGTTCA 57.674 45.000 0.00 0.00 35.14 3.18
3411 6671 2.213499 AGTGCTTTCTTCACCGTTCAG 58.787 47.619 0.00 0.00 35.14 3.02
3412 6672 2.158957 AGTGCTTTCTTCACCGTTCAGA 60.159 45.455 0.00 0.00 35.14 3.27
3413 6673 2.221981 GTGCTTTCTTCACCGTTCAGAG 59.778 50.000 0.00 0.00 0.00 3.35
3414 6674 1.801178 GCTTTCTTCACCGTTCAGAGG 59.199 52.381 0.00 0.00 0.00 3.69
3415 6675 2.548067 GCTTTCTTCACCGTTCAGAGGA 60.548 50.000 0.00 0.00 0.00 3.71
3416 6676 3.866449 GCTTTCTTCACCGTTCAGAGGAT 60.866 47.826 0.00 0.00 0.00 3.24
3417 6677 3.594603 TTCTTCACCGTTCAGAGGATC 57.405 47.619 0.00 0.00 0.00 3.36
3418 6678 2.525368 TCTTCACCGTTCAGAGGATCA 58.475 47.619 0.00 0.00 37.82 2.92
3419 6679 2.897326 TCTTCACCGTTCAGAGGATCAA 59.103 45.455 0.00 0.00 37.82 2.57
3420 6680 3.323691 TCTTCACCGTTCAGAGGATCAAA 59.676 43.478 0.00 0.00 37.82 2.69
3421 6681 3.981071 TCACCGTTCAGAGGATCAAAT 57.019 42.857 0.00 0.00 37.82 2.32
3422 6682 4.286297 TCACCGTTCAGAGGATCAAATT 57.714 40.909 0.00 0.00 37.82 1.82
3423 6683 4.651778 TCACCGTTCAGAGGATCAAATTT 58.348 39.130 0.00 0.00 37.82 1.82
3424 6684 4.455533 TCACCGTTCAGAGGATCAAATTTG 59.544 41.667 12.15 12.15 37.82 2.32
3425 6685 3.758554 ACCGTTCAGAGGATCAAATTTGG 59.241 43.478 17.90 0.45 37.82 3.28
3426 6686 3.428045 CCGTTCAGAGGATCAAATTTGGC 60.428 47.826 17.90 10.30 37.82 4.52
3427 6687 3.191162 CGTTCAGAGGATCAAATTTGGCA 59.809 43.478 17.90 0.00 37.82 4.92
3428 6688 4.142315 CGTTCAGAGGATCAAATTTGGCAT 60.142 41.667 17.90 8.39 37.82 4.40
3429 6689 5.622914 CGTTCAGAGGATCAAATTTGGCATT 60.623 40.000 17.90 2.50 37.82 3.56
3430 6690 6.168389 GTTCAGAGGATCAAATTTGGCATTT 58.832 36.000 17.90 1.70 37.82 2.32
3431 6691 5.726397 TCAGAGGATCAAATTTGGCATTTG 58.274 37.500 17.90 12.74 39.61 2.32
3432 6692 4.873827 CAGAGGATCAAATTTGGCATTTGG 59.126 41.667 17.90 0.84 38.97 3.28
3436 6696 5.484998 AGGATCAAATTTGGCATTTGGTAGT 59.515 36.000 17.90 0.00 38.97 2.73
3451 6711 4.405116 TGGTAGTCCAGTAACAAAACGT 57.595 40.909 0.00 0.00 39.03 3.99
3453 6713 5.184711 TGGTAGTCCAGTAACAAAACGTTT 58.815 37.500 7.96 7.96 39.03 3.60
3454 6714 6.344500 TGGTAGTCCAGTAACAAAACGTTTA 58.656 36.000 15.03 0.00 39.03 2.01
3455 6715 6.257630 TGGTAGTCCAGTAACAAAACGTTTAC 59.742 38.462 15.03 8.75 39.03 2.01
3456 6716 6.479990 GGTAGTCCAGTAACAAAACGTTTACT 59.520 38.462 15.03 11.05 39.14 2.24
3457 6717 6.594284 AGTCCAGTAACAAAACGTTTACTC 57.406 37.500 15.03 2.78 39.14 2.59
3458 6718 6.343703 AGTCCAGTAACAAAACGTTTACTCT 58.656 36.000 15.03 4.97 39.14 3.24
3459 6719 6.820152 AGTCCAGTAACAAAACGTTTACTCTT 59.180 34.615 15.03 5.89 39.14 2.85
3460 6720 7.335171 AGTCCAGTAACAAAACGTTTACTCTTT 59.665 33.333 15.03 5.94 39.14 2.52
3461 6721 7.427318 GTCCAGTAACAAAACGTTTACTCTTTG 59.573 37.037 15.03 10.14 39.14 2.77
3462 6722 7.119553 TCCAGTAACAAAACGTTTACTCTTTGT 59.880 33.333 15.03 10.81 42.30 2.83
3463 6723 7.427318 CCAGTAACAAAACGTTTACTCTTTGTC 59.573 37.037 15.03 3.31 40.23 3.18
3464 6724 7.427318 CAGTAACAAAACGTTTACTCTTTGTCC 59.573 37.037 15.03 8.06 40.23 4.02
3465 6725 5.883503 ACAAAACGTTTACTCTTTGTCCA 57.116 34.783 15.03 0.00 37.41 4.02
3466 6726 6.256912 ACAAAACGTTTACTCTTTGTCCAA 57.743 33.333 15.03 0.00 37.41 3.53
3467 6727 6.088173 ACAAAACGTTTACTCTTTGTCCAAC 58.912 36.000 15.03 0.00 37.41 3.77
3468 6728 6.072342 ACAAAACGTTTACTCTTTGTCCAACT 60.072 34.615 15.03 0.00 37.41 3.16
3469 6729 6.505044 AAACGTTTACTCTTTGTCCAACTT 57.495 33.333 12.83 0.00 0.00 2.66
3470 6730 6.505044 AACGTTTACTCTTTGTCCAACTTT 57.495 33.333 0.00 0.00 0.00 2.66
3471 6731 7.614124 AACGTTTACTCTTTGTCCAACTTTA 57.386 32.000 0.00 0.00 0.00 1.85
3472 6732 7.797038 ACGTTTACTCTTTGTCCAACTTTAT 57.203 32.000 0.00 0.00 0.00 1.40
3473 6733 7.858583 ACGTTTACTCTTTGTCCAACTTTATC 58.141 34.615 0.00 0.00 0.00 1.75
3474 6734 7.713942 ACGTTTACTCTTTGTCCAACTTTATCT 59.286 33.333 0.00 0.00 0.00 1.98
3475 6735 9.199982 CGTTTACTCTTTGTCCAACTTTATCTA 57.800 33.333 0.00 0.00 0.00 1.98
3480 6740 9.793259 ACTCTTTGTCCAACTTTATCTATTTCA 57.207 29.630 0.00 0.00 0.00 2.69
3482 6742 9.567776 TCTTTGTCCAACTTTATCTATTTCACA 57.432 29.630 0.00 0.00 0.00 3.58
3483 6743 9.612620 CTTTGTCCAACTTTATCTATTTCACAC 57.387 33.333 0.00 0.00 0.00 3.82
3484 6744 8.684386 TTGTCCAACTTTATCTATTTCACACA 57.316 30.769 0.00 0.00 0.00 3.72
3485 6745 8.094798 TGTCCAACTTTATCTATTTCACACAC 57.905 34.615 0.00 0.00 0.00 3.82
3486 6746 7.936847 TGTCCAACTTTATCTATTTCACACACT 59.063 33.333 0.00 0.00 0.00 3.55
3487 6747 8.443937 GTCCAACTTTATCTATTTCACACACTC 58.556 37.037 0.00 0.00 0.00 3.51
3488 6748 8.375506 TCCAACTTTATCTATTTCACACACTCT 58.624 33.333 0.00 0.00 0.00 3.24
3489 6749 9.003658 CCAACTTTATCTATTTCACACACTCTT 57.996 33.333 0.00 0.00 0.00 2.85
3500 6760 8.682936 ATTTCACACACTCTTTACAATTCTCT 57.317 30.769 0.00 0.00 0.00 3.10
3524 6784 9.337396 TCTGATGAGTTGTACTGTTTACAAAAT 57.663 29.630 0.00 0.00 38.90 1.82
3527 6787 6.500041 TGAGTTGTACTGTTTACAAAATGCC 58.500 36.000 0.00 0.00 38.90 4.40
3529 6789 6.868622 AGTTGTACTGTTTACAAAATGCCAA 58.131 32.000 0.00 0.00 38.90 4.52
3827 7087 3.195825 AGTTTATTCTGGAGAGGTGACCG 59.804 47.826 0.00 0.00 0.00 4.79
3875 7135 9.199982 GATGATGTTGAAACAAATGAATTCAGT 57.800 29.630 14.54 8.63 43.03 3.41
3890 7150 9.449719 AATGAATTCAGTTACTCGGTTTCTAAT 57.550 29.630 14.54 0.00 0.00 1.73
4078 7338 2.508300 TCCCTGTAAATAACCCTGGAGC 59.492 50.000 0.00 0.00 0.00 4.70
4126 7386 2.162681 CTTCCATTCAAAAGCGTCCCT 58.837 47.619 0.00 0.00 0.00 4.20
4128 7388 0.811281 CCATTCAAAAGCGTCCCTCC 59.189 55.000 0.00 0.00 0.00 4.30
4130 7390 0.676782 ATTCAAAAGCGTCCCTCCGG 60.677 55.000 0.00 0.00 0.00 5.14
4131 7391 3.431725 CAAAAGCGTCCCTCCGGC 61.432 66.667 0.00 0.00 0.00 6.13
4182 7443 1.376942 CAGCAAGCTGTCTGGGAGG 60.377 63.158 13.72 0.00 39.10 4.30
4274 7535 6.036408 GGAATGCCAATAAATTCTGTTTCTGC 59.964 38.462 0.00 0.00 34.01 4.26
4306 7567 0.840617 TGCCAGGTGGTTCAACTGTA 59.159 50.000 11.39 0.00 46.65 2.74
4309 7570 1.812571 CCAGGTGGTTCAACTGTATGC 59.187 52.381 11.39 0.00 46.65 3.14
4319 7580 5.163713 GGTTCAACTGTATGCTCCATTCTTC 60.164 44.000 0.00 0.00 0.00 2.87
4355 7616 0.757188 TTCGGGCATGTTTGGTTGGT 60.757 50.000 0.00 0.00 0.00 3.67
4369 7647 3.300388 TGGTTGGTGACTATTTTTGCCA 58.700 40.909 0.00 0.00 0.00 4.92
4377 7655 5.348164 GTGACTATTTTTGCCACACTTGTT 58.652 37.500 0.00 0.00 0.00 2.83
4378 7656 5.458779 GTGACTATTTTTGCCACACTTGTTC 59.541 40.000 0.00 0.00 0.00 3.18
4441 7721 8.253810 TGAAACCATCATGTCTTTTTACAAACA 58.746 29.630 0.00 0.00 31.50 2.83
4442 7722 9.092876 GAAACCATCATGTCTTTTTACAAACAA 57.907 29.630 0.00 0.00 32.02 2.83
4443 7723 9.442047 AAACCATCATGTCTTTTTACAAACAAA 57.558 25.926 0.00 0.00 32.02 2.83
4444 7724 8.419076 ACCATCATGTCTTTTTACAAACAAAC 57.581 30.769 0.00 0.00 32.02 2.93
4471 7751 7.404671 TCAAAAGAAAGCAGGAGTAAAAGTT 57.595 32.000 0.00 0.00 0.00 2.66
4495 7775 0.176680 ACCTGGAGCGCAACATAGAG 59.823 55.000 11.47 0.11 0.00 2.43
4549 7829 4.703897 TCGGAACATGAGATGGAAATACC 58.296 43.478 0.00 0.00 39.54 2.73
4551 7831 4.685848 CGGAACATGAGATGGAAATACCCA 60.686 45.833 0.00 0.00 41.05 4.51
4597 7877 2.926200 CAATTCAGACACTGCCTCTACG 59.074 50.000 0.00 0.00 0.00 3.51
4598 7878 0.888619 TTCAGACACTGCCTCTACGG 59.111 55.000 0.00 0.00 0.00 4.02
4611 7891 0.108186 TCTACGGCCATCAGCAAGTG 60.108 55.000 2.24 0.00 46.50 3.16
4624 7904 6.461927 CCATCAGCAAGTGCCAAATATACATT 60.462 38.462 0.00 0.00 43.38 2.71
4658 8014 5.745227 TGCCAACAAAACATTCCCTAAAAA 58.255 33.333 0.00 0.00 0.00 1.94
4659 8015 5.586643 TGCCAACAAAACATTCCCTAAAAAC 59.413 36.000 0.00 0.00 0.00 2.43
4660 8016 5.586643 GCCAACAAAACATTCCCTAAAAACA 59.413 36.000 0.00 0.00 0.00 2.83
4661 8017 6.262049 GCCAACAAAACATTCCCTAAAAACAT 59.738 34.615 0.00 0.00 0.00 2.71
4662 8018 7.201776 GCCAACAAAACATTCCCTAAAAACATT 60.202 33.333 0.00 0.00 0.00 2.71
4663 8019 9.331282 CCAACAAAACATTCCCTAAAAACATTA 57.669 29.630 0.00 0.00 0.00 1.90
4674 8535 5.704053 CCCTAAAAACATTAGACGACTGGTT 59.296 40.000 0.00 0.00 0.00 3.67
4714 10263 4.295051 TGCTCCGACAAAAATTGTAAAGC 58.705 39.130 13.00 13.00 45.52 3.51
4723 10272 7.532546 CGACAAAAATTGTAAAGCGATAGTTCA 59.467 33.333 0.00 0.00 45.52 3.18
4731 10280 2.160721 AGCGATAGTTCAAGGGAGGA 57.839 50.000 0.00 0.00 39.35 3.71
4761 10310 8.714179 CCTGAATTGTGACACGTAGTATTTTTA 58.286 33.333 0.22 0.00 41.61 1.52
4762 10311 9.525007 CTGAATTGTGACACGTAGTATTTTTAC 57.475 33.333 0.22 0.00 41.61 2.01
4786 10335 7.033791 ACTAAATACATAGTGTCACAAGGTCG 58.966 38.462 5.62 0.00 34.86 4.79
4787 10336 2.743636 ACATAGTGTCACAAGGTCGG 57.256 50.000 5.62 0.00 0.00 4.79
4788 10337 2.244695 ACATAGTGTCACAAGGTCGGA 58.755 47.619 5.62 0.00 0.00 4.55
4789 10338 2.029290 ACATAGTGTCACAAGGTCGGAC 60.029 50.000 5.62 0.00 0.00 4.79
4790 10339 1.991121 TAGTGTCACAAGGTCGGACT 58.009 50.000 8.23 0.00 32.84 3.85
4791 10340 0.674534 AGTGTCACAAGGTCGGACTC 59.325 55.000 8.23 0.00 32.84 3.36
4792 10341 0.663568 GTGTCACAAGGTCGGACTCG 60.664 60.000 8.23 0.00 37.82 4.18
4793 10342 1.080705 GTCACAAGGTCGGACTCGG 60.081 63.158 8.23 0.41 36.95 4.63
4796 10345 1.228490 ACAAGGTCGGACTCGGAGT 60.228 57.895 11.09 11.09 36.95 3.85
4797 10346 0.826672 ACAAGGTCGGACTCGGAGTT 60.827 55.000 12.67 0.00 36.95 3.01
4798 10347 0.317479 CAAGGTCGGACTCGGAGTTT 59.683 55.000 12.67 0.00 36.95 2.66
4799 10348 0.602060 AAGGTCGGACTCGGAGTTTC 59.398 55.000 12.67 7.18 36.95 2.78
4800 10349 0.251253 AGGTCGGACTCGGAGTTTCT 60.251 55.000 12.67 3.43 36.95 2.52
4801 10350 0.109226 GGTCGGACTCGGAGTTTCTG 60.109 60.000 12.67 5.76 36.95 3.02
4802 10351 0.733223 GTCGGACTCGGAGTTTCTGC 60.733 60.000 12.67 0.00 36.95 4.26
4803 10352 0.894184 TCGGACTCGGAGTTTCTGCT 60.894 55.000 12.67 0.00 36.95 4.24
4804 10353 0.456995 CGGACTCGGAGTTTCTGCTC 60.457 60.000 12.67 0.00 34.89 4.26
4810 10359 4.310288 GAGTTTCTGCTCCCAGGC 57.690 61.111 0.00 0.00 39.61 4.85
4811 10360 1.682257 GAGTTTCTGCTCCCAGGCT 59.318 57.895 0.00 0.00 39.61 4.58
4812 10361 0.392327 GAGTTTCTGCTCCCAGGCTC 60.392 60.000 0.00 0.00 39.61 4.70
4813 10362 1.130054 AGTTTCTGCTCCCAGGCTCA 61.130 55.000 0.00 0.00 39.61 4.26
4814 10363 0.034670 GTTTCTGCTCCCAGGCTCAT 60.035 55.000 0.00 0.00 39.61 2.90
4815 10364 0.254178 TTTCTGCTCCCAGGCTCATC 59.746 55.000 0.00 0.00 39.61 2.92
4816 10365 0.619832 TTCTGCTCCCAGGCTCATCT 60.620 55.000 0.00 0.00 39.61 2.90
4817 10366 1.146485 CTGCTCCCAGGCTCATCTG 59.854 63.158 0.00 0.00 35.38 2.90
4818 10367 2.203181 GCTCCCAGGCTCATCTGC 60.203 66.667 0.00 0.00 33.64 4.26
4819 10368 3.040206 GCTCCCAGGCTCATCTGCA 62.040 63.158 0.00 0.00 33.64 4.41
4820 10369 1.153208 CTCCCAGGCTCATCTGCAC 60.153 63.158 0.00 0.00 33.64 4.57
4821 10370 1.614525 TCCCAGGCTCATCTGCACT 60.615 57.895 0.00 0.00 33.64 4.40
4822 10371 1.153208 CCCAGGCTCATCTGCACTC 60.153 63.158 0.00 0.00 33.64 3.51
4823 10372 1.624479 CCCAGGCTCATCTGCACTCT 61.624 60.000 0.00 0.00 33.64 3.24
4824 10373 0.252479 CCAGGCTCATCTGCACTCTT 59.748 55.000 0.00 0.00 33.64 2.85
4825 10374 1.339824 CCAGGCTCATCTGCACTCTTT 60.340 52.381 0.00 0.00 33.64 2.52
4826 10375 2.434428 CAGGCTCATCTGCACTCTTTT 58.566 47.619 0.00 0.00 34.04 2.27
4827 10376 3.603532 CAGGCTCATCTGCACTCTTTTA 58.396 45.455 0.00 0.00 34.04 1.52
4828 10377 3.622163 CAGGCTCATCTGCACTCTTTTAG 59.378 47.826 0.00 0.00 34.04 1.85
4829 10378 3.517100 AGGCTCATCTGCACTCTTTTAGA 59.483 43.478 0.00 0.00 34.04 2.10
4830 10379 4.019860 AGGCTCATCTGCACTCTTTTAGAA 60.020 41.667 0.00 0.00 34.04 2.10
4831 10380 4.697352 GGCTCATCTGCACTCTTTTAGAAA 59.303 41.667 0.00 0.00 34.04 2.52
4832 10381 5.182001 GGCTCATCTGCACTCTTTTAGAAAA 59.818 40.000 0.00 0.00 34.04 2.29
4833 10382 6.294176 GGCTCATCTGCACTCTTTTAGAAAAA 60.294 38.462 0.00 0.00 34.04 1.94
4891 10440 3.354678 TTTTTGCCGAGAGCTGCC 58.645 55.556 0.00 0.00 44.23 4.85
4892 10441 1.528076 TTTTTGCCGAGAGCTGCCA 60.528 52.632 0.00 0.00 44.23 4.92
4893 10442 1.106351 TTTTTGCCGAGAGCTGCCAA 61.106 50.000 0.00 0.00 44.23 4.52
4894 10443 1.106351 TTTTGCCGAGAGCTGCCAAA 61.106 50.000 0.00 0.00 44.23 3.28
4895 10444 1.106351 TTTGCCGAGAGCTGCCAAAA 61.106 50.000 0.00 0.00 44.23 2.44
4896 10445 0.895100 TTGCCGAGAGCTGCCAAAAT 60.895 50.000 0.00 0.00 44.23 1.82
4897 10446 1.138247 GCCGAGAGCTGCCAAAATG 59.862 57.895 0.00 0.00 38.99 2.32
4898 10447 1.589716 GCCGAGAGCTGCCAAAATGT 61.590 55.000 0.00 0.00 38.99 2.71
4899 10448 0.449388 CCGAGAGCTGCCAAAATGTC 59.551 55.000 0.00 0.00 0.00 3.06
4900 10449 0.449388 CGAGAGCTGCCAAAATGTCC 59.551 55.000 0.00 0.00 0.00 4.02
4901 10450 1.538047 GAGAGCTGCCAAAATGTCCA 58.462 50.000 0.00 0.00 0.00 4.02
4902 10451 1.888512 GAGAGCTGCCAAAATGTCCAA 59.111 47.619 0.00 0.00 0.00 3.53
4903 10452 2.297033 GAGAGCTGCCAAAATGTCCAAA 59.703 45.455 0.00 0.00 0.00 3.28
4904 10453 2.901839 AGAGCTGCCAAAATGTCCAAAT 59.098 40.909 0.00 0.00 0.00 2.32
4905 10454 2.997986 GAGCTGCCAAAATGTCCAAATG 59.002 45.455 0.00 0.00 0.00 2.32
4906 10455 2.633967 AGCTGCCAAAATGTCCAAATGA 59.366 40.909 0.00 0.00 0.00 2.57
4907 10456 2.997986 GCTGCCAAAATGTCCAAATGAG 59.002 45.455 0.00 0.00 0.00 2.90
4908 10457 3.555586 GCTGCCAAAATGTCCAAATGAGT 60.556 43.478 0.00 0.00 0.00 3.41
4909 10458 4.634199 CTGCCAAAATGTCCAAATGAGTT 58.366 39.130 0.00 0.00 0.00 3.01
4910 10459 5.782047 CTGCCAAAATGTCCAAATGAGTTA 58.218 37.500 0.00 0.00 0.00 2.24
4911 10460 6.166984 TGCCAAAATGTCCAAATGAGTTAA 57.833 33.333 0.00 0.00 0.00 2.01
4912 10461 6.586344 TGCCAAAATGTCCAAATGAGTTAAA 58.414 32.000 0.00 0.00 0.00 1.52
4913 10462 7.050377 TGCCAAAATGTCCAAATGAGTTAAAA 58.950 30.769 0.00 0.00 0.00 1.52
4914 10463 7.718753 TGCCAAAATGTCCAAATGAGTTAAAAT 59.281 29.630 0.00 0.00 0.00 1.82
4915 10464 8.567104 GCCAAAATGTCCAAATGAGTTAAAATT 58.433 29.630 0.00 0.00 0.00 1.82
4921 10470 9.860898 ATGTCCAAATGAGTTAAAATTTAGAGC 57.139 29.630 0.00 0.00 0.00 4.09
4922 10471 8.020819 TGTCCAAATGAGTTAAAATTTAGAGCG 58.979 33.333 0.00 0.00 0.00 5.03
4923 10472 7.484959 GTCCAAATGAGTTAAAATTTAGAGCGG 59.515 37.037 0.00 0.00 0.00 5.52
4924 10473 7.392113 TCCAAATGAGTTAAAATTTAGAGCGGA 59.608 33.333 0.00 0.00 0.00 5.54
4925 10474 7.484959 CCAAATGAGTTAAAATTTAGAGCGGAC 59.515 37.037 0.00 0.00 0.00 4.79
4926 10475 6.679327 ATGAGTTAAAATTTAGAGCGGACC 57.321 37.500 0.00 0.00 0.00 4.46
4927 10476 5.801380 TGAGTTAAAATTTAGAGCGGACCT 58.199 37.500 0.00 0.00 0.00 3.85
4928 10477 5.873164 TGAGTTAAAATTTAGAGCGGACCTC 59.127 40.000 0.00 0.00 41.07 3.85
4929 10478 5.801380 AGTTAAAATTTAGAGCGGACCTCA 58.199 37.500 0.00 0.00 43.31 3.86
4930 10479 5.642491 AGTTAAAATTTAGAGCGGACCTCAC 59.358 40.000 0.00 0.00 43.31 3.51
4931 10480 2.295253 AATTTAGAGCGGACCTCACG 57.705 50.000 0.00 0.00 43.31 4.35
4938 10487 4.277239 CGGACCTCACGCATCAAA 57.723 55.556 0.00 0.00 0.00 2.69
4939 10488 2.767536 CGGACCTCACGCATCAAAT 58.232 52.632 0.00 0.00 0.00 2.32
4940 10489 1.086696 CGGACCTCACGCATCAAATT 58.913 50.000 0.00 0.00 0.00 1.82
4941 10490 2.276201 CGGACCTCACGCATCAAATTA 58.724 47.619 0.00 0.00 0.00 1.40
4942 10491 2.872245 CGGACCTCACGCATCAAATTAT 59.128 45.455 0.00 0.00 0.00 1.28
4943 10492 3.059597 CGGACCTCACGCATCAAATTATC 60.060 47.826 0.00 0.00 0.00 1.75
4944 10493 4.130118 GGACCTCACGCATCAAATTATCT 58.870 43.478 0.00 0.00 0.00 1.98
4945 10494 5.297547 GGACCTCACGCATCAAATTATCTA 58.702 41.667 0.00 0.00 0.00 1.98
4946 10495 5.934625 GGACCTCACGCATCAAATTATCTAT 59.065 40.000 0.00 0.00 0.00 1.98
4947 10496 6.091441 GGACCTCACGCATCAAATTATCTATC 59.909 42.308 0.00 0.00 0.00 2.08
4948 10497 6.524734 ACCTCACGCATCAAATTATCTATCA 58.475 36.000 0.00 0.00 0.00 2.15
4949 10498 6.425114 ACCTCACGCATCAAATTATCTATCAC 59.575 38.462 0.00 0.00 0.00 3.06
4950 10499 6.128445 CCTCACGCATCAAATTATCTATCACC 60.128 42.308 0.00 0.00 0.00 4.02
4951 10500 5.700832 TCACGCATCAAATTATCTATCACCC 59.299 40.000 0.00 0.00 0.00 4.61
4952 10501 5.702670 CACGCATCAAATTATCTATCACCCT 59.297 40.000 0.00 0.00 0.00 4.34
4953 10502 5.934625 ACGCATCAAATTATCTATCACCCTC 59.065 40.000 0.00 0.00 0.00 4.30
4954 10503 5.934043 CGCATCAAATTATCTATCACCCTCA 59.066 40.000 0.00 0.00 0.00 3.86
4955 10504 6.427853 CGCATCAAATTATCTATCACCCTCAA 59.572 38.462 0.00 0.00 0.00 3.02
4956 10505 7.041167 CGCATCAAATTATCTATCACCCTCAAA 60.041 37.037 0.00 0.00 0.00 2.69
4957 10506 8.632679 GCATCAAATTATCTATCACCCTCAAAA 58.367 33.333 0.00 0.00 0.00 2.44
5021 10570 3.526931 TTTTCTGAGCGGGAGTAGATG 57.473 47.619 0.00 0.00 0.00 2.90
5022 10571 2.437085 TTCTGAGCGGGAGTAGATGA 57.563 50.000 0.00 0.00 0.00 2.92
5023 10572 1.974265 TCTGAGCGGGAGTAGATGAG 58.026 55.000 0.00 0.00 0.00 2.90
5024 10573 0.313672 CTGAGCGGGAGTAGATGAGC 59.686 60.000 0.00 0.00 0.00 4.26
5025 10574 1.109920 TGAGCGGGAGTAGATGAGCC 61.110 60.000 0.00 0.00 0.00 4.70
5026 10575 0.825840 GAGCGGGAGTAGATGAGCCT 60.826 60.000 0.00 0.00 0.00 4.58
5027 10576 1.112315 AGCGGGAGTAGATGAGCCTG 61.112 60.000 0.00 0.00 0.00 4.85
5028 10577 2.045280 CGGGAGTAGATGAGCCTGG 58.955 63.158 0.00 0.00 0.00 4.45
5029 10578 1.467678 CGGGAGTAGATGAGCCTGGG 61.468 65.000 0.00 0.00 0.00 4.45
5030 10579 1.751563 GGAGTAGATGAGCCTGGGC 59.248 63.158 3.00 3.00 42.33 5.36
5031 10580 1.050988 GGAGTAGATGAGCCTGGGCA 61.051 60.000 14.39 0.00 44.88 5.36
5032 10581 0.105778 GAGTAGATGAGCCTGGGCAC 59.894 60.000 14.39 8.23 44.88 5.01
5044 10593 4.415783 GGGCACCGAGTTGGATTT 57.584 55.556 2.42 0.00 40.86 2.17
5045 10594 2.180674 GGGCACCGAGTTGGATTTC 58.819 57.895 2.42 0.00 40.86 2.17
5046 10595 1.313091 GGGCACCGAGTTGGATTTCC 61.313 60.000 2.42 0.00 40.86 3.13
5047 10596 0.608035 GGCACCGAGTTGGATTTCCA 60.608 55.000 2.42 0.00 45.94 3.53
5060 10609 4.630111 TGGATTTCCAGTGTCAAAAATGC 58.370 39.130 0.00 0.00 42.01 3.56
5061 10610 4.344679 TGGATTTCCAGTGTCAAAAATGCT 59.655 37.500 0.00 0.00 42.01 3.79
5062 10611 5.538053 TGGATTTCCAGTGTCAAAAATGCTA 59.462 36.000 0.00 0.00 42.01 3.49
5063 10612 5.863935 GGATTTCCAGTGTCAAAAATGCTAC 59.136 40.000 0.00 0.00 35.64 3.58
5064 10613 6.294731 GGATTTCCAGTGTCAAAAATGCTACT 60.295 38.462 0.00 0.00 35.64 2.57
5065 10614 5.437289 TTCCAGTGTCAAAAATGCTACTG 57.563 39.130 0.00 0.00 36.27 2.74
5066 10615 4.460263 TCCAGTGTCAAAAATGCTACTGT 58.540 39.130 0.00 0.00 35.09 3.55
5067 10616 5.616270 TCCAGTGTCAAAAATGCTACTGTA 58.384 37.500 0.00 0.00 35.09 2.74
5068 10617 6.237901 TCCAGTGTCAAAAATGCTACTGTAT 58.762 36.000 0.00 0.00 35.09 2.29
5069 10618 6.714810 TCCAGTGTCAAAAATGCTACTGTATT 59.285 34.615 0.00 0.00 35.09 1.89
5070 10619 7.880713 TCCAGTGTCAAAAATGCTACTGTATTA 59.119 33.333 0.00 0.00 35.09 0.98
5071 10620 8.677300 CCAGTGTCAAAAATGCTACTGTATTAT 58.323 33.333 0.00 0.00 35.09 1.28
5082 10631 9.817809 AATGCTACTGTATTATATTATGGGACG 57.182 33.333 0.00 0.00 0.00 4.79
5083 10632 7.778083 TGCTACTGTATTATATTATGGGACGG 58.222 38.462 0.00 0.00 0.00 4.79
5084 10633 7.616542 TGCTACTGTATTATATTATGGGACGGA 59.383 37.037 0.00 0.00 0.00 4.69
5085 10634 8.136165 GCTACTGTATTATATTATGGGACGGAG 58.864 40.741 0.00 0.00 0.00 4.63
5086 10635 7.419711 ACTGTATTATATTATGGGACGGAGG 57.580 40.000 0.00 0.00 0.00 4.30
5087 10636 7.186972 ACTGTATTATATTATGGGACGGAGGA 58.813 38.462 0.00 0.00 0.00 3.71
5088 10637 7.676893 ACTGTATTATATTATGGGACGGAGGAA 59.323 37.037 0.00 0.00 0.00 3.36
5089 10638 8.074613 TGTATTATATTATGGGACGGAGGAAG 57.925 38.462 0.00 0.00 0.00 3.46
5090 10639 7.676893 TGTATTATATTATGGGACGGAGGAAGT 59.323 37.037 0.00 0.00 0.00 3.01
5091 10640 9.193806 GTATTATATTATGGGACGGAGGAAGTA 57.806 37.037 0.00 0.00 0.00 2.24
5092 10641 8.855804 ATTATATTATGGGACGGAGGAAGTAT 57.144 34.615 0.00 0.00 0.00 2.12
5093 10642 9.947189 ATTATATTATGGGACGGAGGAAGTATA 57.053 33.333 0.00 0.00 0.00 1.47
5094 10643 9.947189 TTATATTATGGGACGGAGGAAGTATAT 57.053 33.333 0.00 0.00 0.00 0.86
5095 10644 8.855804 ATATTATGGGACGGAGGAAGTATATT 57.144 34.615 0.00 0.00 0.00 1.28
5096 10645 6.600882 TTATGGGACGGAGGAAGTATATTC 57.399 41.667 0.00 0.00 0.00 1.75
5097 10646 4.194678 TGGGACGGAGGAAGTATATTCT 57.805 45.455 0.00 0.00 0.00 2.40
5098 10647 3.895656 TGGGACGGAGGAAGTATATTCTG 59.104 47.826 0.00 0.00 0.00 3.02
5099 10648 4.150359 GGGACGGAGGAAGTATATTCTGA 58.850 47.826 0.00 0.00 0.00 3.27
5100 10649 4.587684 GGGACGGAGGAAGTATATTCTGAA 59.412 45.833 0.00 0.00 0.00 3.02
5101 10650 5.509332 GGGACGGAGGAAGTATATTCTGAAC 60.509 48.000 0.00 0.00 0.00 3.18
5102 10651 5.509332 GGACGGAGGAAGTATATTCTGAACC 60.509 48.000 0.00 0.00 0.00 3.62
5103 10652 4.960469 ACGGAGGAAGTATATTCTGAACCA 59.040 41.667 0.00 0.00 0.00 3.67
5104 10653 5.424252 ACGGAGGAAGTATATTCTGAACCAA 59.576 40.000 0.00 0.00 0.00 3.67
5105 10654 5.986135 CGGAGGAAGTATATTCTGAACCAAG 59.014 44.000 0.00 0.00 0.00 3.61
5106 10655 6.292150 GGAGGAAGTATATTCTGAACCAAGG 58.708 44.000 0.00 0.00 0.00 3.61
5107 10656 6.099845 GGAGGAAGTATATTCTGAACCAAGGA 59.900 42.308 0.00 0.00 0.00 3.36
5108 10657 7.365652 GGAGGAAGTATATTCTGAACCAAGGAA 60.366 40.741 0.00 0.00 0.00 3.36
5109 10658 7.928873 AGGAAGTATATTCTGAACCAAGGAAA 58.071 34.615 0.00 0.00 0.00 3.13
5110 10659 7.829706 AGGAAGTATATTCTGAACCAAGGAAAC 59.170 37.037 0.00 0.00 0.00 2.78
5113 10662 8.567285 AGTATATTCTGAACCAAGGAAACAAG 57.433 34.615 0.00 0.00 0.00 3.16
5150 10700 1.537202 GTTGTGCTTGATCCAGTGGAC 59.463 52.381 15.86 9.34 32.98 4.02
5188 10738 2.600420 CGATGCATCCATCATACGCTAC 59.400 50.000 20.87 0.00 46.59 3.58
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
126 128 4.818546 CCATGGTGAGTGAGGAACATATTC 59.181 45.833 2.57 0.00 0.00 1.75
249 251 6.420913 AGGCTAGAGTTCTACAGTTTTCAA 57.579 37.500 0.00 0.00 0.00 2.69
313 330 1.004277 GTGTTGGTATCAAGCCCAGGA 59.996 52.381 0.00 0.00 32.92 3.86
325 342 0.831966 ACAAGTGACGGGTGTTGGTA 59.168 50.000 0.00 0.00 0.00 3.25
341 359 1.148273 GTGGTGGTGCAGGAGACAA 59.852 57.895 0.00 0.00 0.00 3.18
421 439 4.142838 CGTCTGAAAAGCTGCATATCAACA 60.143 41.667 1.02 0.00 0.00 3.33
444 462 4.376717 CGGCTTTGGTAAGTTACTTTCGAC 60.377 45.833 12.65 0.00 33.74 4.20
447 465 5.237996 ACTTCGGCTTTGGTAAGTTACTTTC 59.762 40.000 12.65 0.00 33.74 2.62
454 472 2.922740 TGACTTCGGCTTTGGTAAGT 57.077 45.000 0.00 0.00 34.96 2.24
491 512 3.880846 GAATTGCTGCTCCGGCCG 61.881 66.667 21.04 21.04 37.74 6.13
580 605 0.464735 CTTGGTTCGTGGTTGGTGGA 60.465 55.000 0.00 0.00 0.00 4.02
680 707 2.288825 ACGAAGTTTTCTCCAGCATCGA 60.289 45.455 0.00 0.00 37.78 3.59
824 863 3.058224 GGCGCCGAATAATAAAGCTTCAT 60.058 43.478 12.58 0.00 0.00 2.57
859 898 2.014064 TTCGACGTCACGGTTTGGGA 62.014 55.000 17.16 0.00 0.00 4.37
862 901 1.197428 CGTTCGACGTCACGGTTTG 59.803 57.895 17.16 0.00 36.74 2.93
868 907 0.929824 TTTCGGTCGTTCGACGTCAC 60.930 55.000 17.16 6.15 43.14 3.67
938 1158 1.336755 CCTACGCCTTTGCACAAACTT 59.663 47.619 0.00 0.00 37.32 2.66
939 1159 0.951558 CCTACGCCTTTGCACAAACT 59.048 50.000 0.00 0.00 37.32 2.66
940 1160 0.663269 GCCTACGCCTTTGCACAAAC 60.663 55.000 0.00 0.00 37.32 2.93
942 1162 3.350377 GCCTACGCCTTTGCACAA 58.650 55.556 0.00 0.00 37.32 3.33
952 1172 2.578981 GACGACGAAGGCCTACGC 60.579 66.667 5.16 0.00 0.00 4.42
1152 1391 0.030638 CGCTTTTGGGAGTGGTGTTG 59.969 55.000 0.00 0.00 33.84 3.33
1153 1392 1.106944 CCGCTTTTGGGAGTGGTGTT 61.107 55.000 0.00 0.00 41.40 3.32
1154 1393 1.528309 CCGCTTTTGGGAGTGGTGT 60.528 57.895 0.00 0.00 41.40 4.16
1432 1698 3.825623 GAAGGGCATGGGGAGGGG 61.826 72.222 0.00 0.00 0.00 4.79
1437 1703 3.358824 AAGGGGAAGGGCATGGGG 61.359 66.667 0.00 0.00 0.00 4.96
1441 1707 3.420482 CGGGAAGGGGAAGGGCAT 61.420 66.667 0.00 0.00 0.00 4.40
1447 1713 2.687566 GAGAGCCGGGAAGGGGAA 60.688 66.667 2.18 0.00 41.48 3.97
1468 1734 4.951963 CGAGAGCCGGGATTCGCC 62.952 72.222 2.18 0.00 37.59 5.54
1523 1789 0.812811 CAGTCACATCCGCCATGAGG 60.813 60.000 0.00 0.00 36.21 3.86
1635 1907 4.263506 GGAAGTGGAGGAAGAAATCAAGGA 60.264 45.833 0.00 0.00 0.00 3.36
1652 1924 2.095059 CGGCCTCAAAATTCAGGAAGTG 60.095 50.000 0.00 0.00 30.32 3.16
1653 1925 2.162681 CGGCCTCAAAATTCAGGAAGT 58.837 47.619 0.00 0.00 30.32 3.01
1657 1929 1.322538 CCCCGGCCTCAAAATTCAGG 61.323 60.000 0.00 0.00 0.00 3.86
1658 1930 1.322538 CCCCCGGCCTCAAAATTCAG 61.323 60.000 0.00 0.00 0.00 3.02
1659 1931 1.304879 CCCCCGGCCTCAAAATTCA 60.305 57.895 0.00 0.00 0.00 2.57
1660 1932 2.721167 GCCCCCGGCCTCAAAATTC 61.721 63.158 0.00 0.00 44.06 2.17
1661 1933 2.683572 GCCCCCGGCCTCAAAATT 60.684 61.111 0.00 0.00 44.06 1.82
1688 1961 1.188871 TTTCCCCCACAAATTCCGGC 61.189 55.000 0.00 0.00 0.00 6.13
1787 2064 2.202756 GTAGAACGGAGCAGGCGG 60.203 66.667 0.00 0.00 0.00 6.13
1809 2086 5.246981 TCAGATTCCTCATTGTTCTTGGT 57.753 39.130 0.00 0.00 0.00 3.67
1831 2108 2.096496 ACGAGTAGCAGCGTATACGTTT 59.904 45.455 25.04 12.17 39.21 3.60
1859 2158 1.079405 CTCGTCCCAAAAGCGGCTA 60.079 57.895 1.35 0.00 0.00 3.93
1886 2186 2.380084 TGCAACGTCCTACCAGATTC 57.620 50.000 0.00 0.00 0.00 2.52
1891 2191 1.855295 TCCTATGCAACGTCCTACCA 58.145 50.000 0.00 0.00 0.00 3.25
1969 2271 0.040425 CGAAAAGGCTGAAACCACCG 60.040 55.000 0.00 0.00 0.00 4.94
1989 2291 6.814506 AAGAAGATGACAGGAAATTGTGAG 57.185 37.500 0.00 0.00 0.00 3.51
2071 2373 5.071788 TGAACTACTCCTGGAACATCAAGTT 59.928 40.000 0.00 1.78 44.93 2.66
2072 2374 4.593206 TGAACTACTCCTGGAACATCAAGT 59.407 41.667 0.00 0.00 38.20 3.16
2115 2417 7.220741 TCTAGGATGGAGAATGTTAGAATCG 57.779 40.000 0.00 0.00 0.00 3.34
2137 2445 5.303078 ACTGCATCGGAAGTCAGTTATATCT 59.697 40.000 0.00 0.00 35.21 1.98
2167 2476 9.098355 GAGTGTTATTCATGCAAGTAGATAACA 57.902 33.333 16.47 16.47 32.82 2.41
2186 2495 5.491078 AGGGGATCAAACATAAGGAGTGTTA 59.509 40.000 0.00 0.00 38.76 2.41
2195 2504 6.467194 GGGATCACATAGGGGATCAAACATAA 60.467 42.308 20.42 0.00 41.30 1.90
2207 2516 0.681733 CTGGTCGGGATCACATAGGG 59.318 60.000 0.00 0.00 0.00 3.53
2397 5503 3.634397 TCTAGCAAACAAGATGGAGGG 57.366 47.619 0.00 0.00 0.00 4.30
2444 5550 8.674263 TCAGTATTCAGTAGTAACTAGTAGGC 57.326 38.462 0.00 0.00 33.48 3.93
2525 5631 4.790140 CGAACAAGAGTCAAATAATGCAGC 59.210 41.667 0.00 0.00 0.00 5.25
2580 5686 1.288335 TGGAACTCTCCCCTACTCCTC 59.712 57.143 0.00 0.00 41.64 3.71
2594 5700 2.629617 CCAATGGCTTCTTGTTGGAACT 59.370 45.455 0.00 0.00 42.88 3.01
2596 5702 1.969923 CCCAATGGCTTCTTGTTGGAA 59.030 47.619 4.65 0.00 42.88 3.53
2625 5731 3.996921 ATTCTGACTGAAGTGGCATCT 57.003 42.857 0.00 0.00 38.18 2.90
2627 5733 4.910195 TGTAATTCTGACTGAAGTGGCAT 58.090 39.130 5.42 0.00 38.18 4.40
2634 5740 3.055458 TGGGCGATGTAATTCTGACTGAA 60.055 43.478 0.00 0.00 39.24 3.02
2638 5744 3.466836 TCATGGGCGATGTAATTCTGAC 58.533 45.455 9.39 0.00 33.29 3.51
2648 5754 3.197333 AGGAAGATCTATCATGGGCGATG 59.803 47.826 2.72 2.72 0.00 3.84
2652 5758 5.936956 CACTAAAGGAAGATCTATCATGGGC 59.063 44.000 0.00 0.00 0.00 5.36
2657 5763 8.465273 TTCGATCACTAAAGGAAGATCTATCA 57.535 34.615 0.00 0.00 35.81 2.15
2658 5764 9.751542 TTTTCGATCACTAAAGGAAGATCTATC 57.248 33.333 0.00 0.00 35.81 2.08
2682 5788 9.636789 TTAGGAAAAACTAAGGCTCTACTTTTT 57.363 29.630 0.00 0.00 32.02 1.94
2683 5789 9.809395 ATTAGGAAAAACTAAGGCTCTACTTTT 57.191 29.630 0.00 0.00 36.47 2.27
2686 5792 9.269494 ACTATTAGGAAAAACTAAGGCTCTACT 57.731 33.333 0.00 0.00 36.47 2.57
2687 5793 9.887629 AACTATTAGGAAAAACTAAGGCTCTAC 57.112 33.333 0.00 0.00 36.47 2.59
2705 5811 5.902051 GCGTAAGGCACCTAAACTATTAG 57.098 43.478 0.00 0.00 42.87 1.73
2724 5830 1.071471 CAAGGGGACAACTCAGCGT 59.929 57.895 0.00 0.00 0.00 5.07
2834 5941 5.149973 TGTGCTTTGCCAATACATCAAAT 57.850 34.783 0.00 0.00 0.00 2.32
2835 5942 4.597404 TGTGCTTTGCCAATACATCAAA 57.403 36.364 0.00 0.00 0.00 2.69
2858 5965 5.476599 ACAGAGCACTGCCAATGTATTTTTA 59.523 36.000 11.37 0.00 46.95 1.52
2890 5998 5.003096 ACCCAGATCAAACCTCTCATTTT 57.997 39.130 0.00 0.00 0.00 1.82
2894 6002 2.619931 TGACCCAGATCAAACCTCTCA 58.380 47.619 0.00 0.00 0.00 3.27
2900 6008 5.183904 AGCAGTTTAATGACCCAGATCAAAC 59.816 40.000 0.00 0.00 30.82 2.93
2902 6010 4.922206 AGCAGTTTAATGACCCAGATCAA 58.078 39.130 0.00 0.00 30.82 2.57
2924 6032 7.068226 TGTTGTATCTGACGGAAGATCTTGATA 59.932 37.037 14.00 9.47 37.98 2.15
2938 6048 5.300539 TGAGGAGATAGCTGTTGTATCTGAC 59.699 44.000 0.00 0.00 37.36 3.51
2948 6058 5.369110 AGATCCAAATTGAGGAGATAGCTGT 59.631 40.000 0.00 0.00 38.83 4.40
2954 6064 6.766997 ATCAGAGATCCAAATTGAGGAGAT 57.233 37.500 6.13 1.19 38.83 2.75
2973 6083 6.351711 CCTGGTTAGGGATGAGCTTATATCAG 60.352 46.154 0.00 0.00 40.63 2.90
3011 6121 2.609427 TGCTGCCTATGACTAAGCTG 57.391 50.000 0.00 0.00 34.92 4.24
3035 6145 4.989279 TTCAAAGCCTTTGGAGATATGC 57.011 40.909 16.72 0.00 40.98 3.14
3044 6154 7.293018 GCATGTATTTCTTTTCAAAGCCTTTG 58.707 34.615 10.99 10.99 41.96 2.77
3045 6155 6.427853 GGCATGTATTTCTTTTCAAAGCCTTT 59.572 34.615 0.00 0.00 35.99 3.11
3046 6156 5.934043 GGCATGTATTTCTTTTCAAAGCCTT 59.066 36.000 0.00 0.00 35.99 4.35
3068 6178 3.944015 GGCAATCTATGGATATGTCAGGC 59.056 47.826 0.00 0.00 0.00 4.85
3083 6193 2.089980 GAGCATTCACAGTGGCAATCT 58.910 47.619 0.00 0.00 0.00 2.40
3084 6194 1.133790 GGAGCATTCACAGTGGCAATC 59.866 52.381 0.00 0.00 0.00 2.67
3100 6210 6.591750 TCTATTAGGCTACTACATTGGAGC 57.408 41.667 0.00 0.00 0.00 4.70
3133 6243 5.536916 TGTCCGAAGTTTGGAAAATAACCAT 59.463 36.000 13.77 0.00 37.23 3.55
3134 6244 4.888239 TGTCCGAAGTTTGGAAAATAACCA 59.112 37.500 13.77 3.04 37.23 3.67
3142 6252 2.294074 CACCTTGTCCGAAGTTTGGAA 58.706 47.619 13.77 0.00 37.23 3.53
3144 6254 0.951558 CCACCTTGTCCGAAGTTTGG 59.048 55.000 2.25 2.25 0.00 3.28
3145 6255 0.951558 CCCACCTTGTCCGAAGTTTG 59.048 55.000 0.00 0.00 0.00 2.93
3153 6263 3.607370 GACGCTCCCCACCTTGTCC 62.607 68.421 0.00 0.00 0.00 4.02
3157 6267 1.049289 GGATAGACGCTCCCCACCTT 61.049 60.000 0.00 0.00 0.00 3.50
3158 6268 1.457831 GGATAGACGCTCCCCACCT 60.458 63.158 0.00 0.00 0.00 4.00
3159 6269 2.508751 GGGATAGACGCTCCCCACC 61.509 68.421 4.45 0.00 45.80 4.61
3167 6277 1.270358 GGTCCATTGAGGGATAGACGC 60.270 57.143 0.00 0.00 39.62 5.19
3168 6278 2.039418 TGGTCCATTGAGGGATAGACG 58.961 52.381 0.00 0.00 39.62 4.18
3184 6294 7.497925 ACTACTTGTTTCTCATTTCTTGGTC 57.502 36.000 0.00 0.00 0.00 4.02
3187 6297 8.830580 TGAGAACTACTTGTTTCTCATTTCTTG 58.169 33.333 9.44 0.00 39.30 3.02
3211 6403 4.274214 CAGTTCTCACAAGATTGCAACTGA 59.726 41.667 0.00 0.00 37.47 3.41
3229 6421 7.274686 GCAACTCTGTATCTAGAAAGTCAGTTC 59.725 40.741 0.00 0.00 0.00 3.01
3230 6422 7.093992 GCAACTCTGTATCTAGAAAGTCAGTT 58.906 38.462 0.00 0.36 0.00 3.16
3231 6423 6.209589 TGCAACTCTGTATCTAGAAAGTCAGT 59.790 38.462 0.00 0.00 0.00 3.41
3258 6450 5.590259 AGTCAATAGTTGCACAGAAAGTTGT 59.410 36.000 0.00 0.00 0.00 3.32
3259 6451 6.064846 AGTCAATAGTTGCACAGAAAGTTG 57.935 37.500 0.00 0.00 0.00 3.16
3260 6452 6.318648 TCAAGTCAATAGTTGCACAGAAAGTT 59.681 34.615 0.00 0.00 36.20 2.66
3296 6556 6.942532 ACACTTATTTCTCACTCAGCAAAA 57.057 33.333 0.00 0.00 0.00 2.44
3299 6559 6.346477 ACTACACTTATTTCTCACTCAGCA 57.654 37.500 0.00 0.00 0.00 4.41
3302 6562 7.297936 TCCAACTACACTTATTTCTCACTCA 57.702 36.000 0.00 0.00 0.00 3.41
3303 6563 8.603242 TTTCCAACTACACTTATTTCTCACTC 57.397 34.615 0.00 0.00 0.00 3.51
3346 6606 4.357918 AAAGAGCAGAGTACCACACATT 57.642 40.909 0.00 0.00 0.00 2.71
3349 6609 8.414778 AGTATATTAAAGAGCAGAGTACCACAC 58.585 37.037 0.00 0.00 0.00 3.82
3350 6610 8.414003 CAGTATATTAAAGAGCAGAGTACCACA 58.586 37.037 0.00 0.00 0.00 4.17
3372 6632 9.502091 AAAGCACTAAAATGTTAGATCACAGTA 57.498 29.630 9.75 0.00 39.36 2.74
3373 6633 7.986085 AAGCACTAAAATGTTAGATCACAGT 57.014 32.000 9.75 0.00 39.36 3.55
3375 6635 8.621532 AGAAAGCACTAAAATGTTAGATCACA 57.378 30.769 9.75 0.00 39.36 3.58
3407 6667 6.167685 CAAATGCCAAATTTGATCCTCTGAA 58.832 36.000 19.86 0.00 40.42 3.02
3409 6669 4.873827 CCAAATGCCAAATTTGATCCTCTG 59.126 41.667 19.86 8.93 40.42 3.35
3410 6670 4.533311 ACCAAATGCCAAATTTGATCCTCT 59.467 37.500 19.86 0.00 40.42 3.69
3411 6671 4.835678 ACCAAATGCCAAATTTGATCCTC 58.164 39.130 19.86 4.03 40.42 3.71
3412 6672 4.914177 ACCAAATGCCAAATTTGATCCT 57.086 36.364 19.86 1.60 40.42 3.24
3413 6673 5.733676 ACTACCAAATGCCAAATTTGATCC 58.266 37.500 19.86 7.94 40.42 3.36
3414 6674 5.812127 GGACTACCAAATGCCAAATTTGATC 59.188 40.000 19.86 10.97 40.42 2.92
3415 6675 5.248020 TGGACTACCAAATGCCAAATTTGAT 59.752 36.000 19.86 3.13 43.91 2.57
3416 6676 4.590647 TGGACTACCAAATGCCAAATTTGA 59.409 37.500 19.86 0.52 43.91 2.69
3417 6677 4.892433 TGGACTACCAAATGCCAAATTTG 58.108 39.130 11.40 11.40 43.91 2.32
3418 6678 4.592778 ACTGGACTACCAAATGCCAAATTT 59.407 37.500 0.00 0.00 46.32 1.82
3419 6679 4.159557 ACTGGACTACCAAATGCCAAATT 58.840 39.130 0.00 0.00 46.32 1.82
3420 6680 3.778265 ACTGGACTACCAAATGCCAAAT 58.222 40.909 0.00 0.00 46.32 2.32
3421 6681 3.237268 ACTGGACTACCAAATGCCAAA 57.763 42.857 0.00 0.00 46.32 3.28
3422 6682 2.969821 ACTGGACTACCAAATGCCAA 57.030 45.000 0.00 0.00 46.32 4.52
3423 6683 3.073209 TGTTACTGGACTACCAAATGCCA 59.927 43.478 0.00 0.00 46.32 4.92
3424 6684 3.681593 TGTTACTGGACTACCAAATGCC 58.318 45.455 0.00 0.00 46.32 4.40
3425 6685 5.699097 TTTGTTACTGGACTACCAAATGC 57.301 39.130 0.00 0.00 46.32 3.56
3426 6686 6.140110 CGTTTTGTTACTGGACTACCAAATG 58.860 40.000 0.00 0.00 46.32 2.32
3427 6687 5.824097 ACGTTTTGTTACTGGACTACCAAAT 59.176 36.000 0.00 0.00 46.32 2.32
3428 6688 5.184711 ACGTTTTGTTACTGGACTACCAAA 58.815 37.500 0.00 0.00 46.32 3.28
3429 6689 4.768583 ACGTTTTGTTACTGGACTACCAA 58.231 39.130 0.00 0.00 46.32 3.67
3430 6690 4.405116 ACGTTTTGTTACTGGACTACCA 57.595 40.909 0.00 0.00 44.76 3.25
3431 6691 5.739752 AAACGTTTTGTTACTGGACTACC 57.260 39.130 7.96 0.00 40.84 3.18
3432 6692 7.436376 AGAGTAAACGTTTTGTTACTGGACTAC 59.564 37.037 20.19 6.25 40.84 2.73
3436 6696 7.119553 ACAAAGAGTAAACGTTTTGTTACTGGA 59.880 33.333 20.19 0.00 39.88 3.86
3454 6714 9.793259 TGAAATAGATAAAGTTGGACAAAGAGT 57.207 29.630 0.00 0.00 0.00 3.24
3456 6716 9.567776 TGTGAAATAGATAAAGTTGGACAAAGA 57.432 29.630 0.00 0.00 0.00 2.52
3457 6717 9.612620 GTGTGAAATAGATAAAGTTGGACAAAG 57.387 33.333 0.00 0.00 0.00 2.77
3458 6718 9.126151 TGTGTGAAATAGATAAAGTTGGACAAA 57.874 29.630 0.00 0.00 0.00 2.83
3459 6719 8.564574 GTGTGTGAAATAGATAAAGTTGGACAA 58.435 33.333 0.00 0.00 0.00 3.18
3460 6720 7.936847 AGTGTGTGAAATAGATAAAGTTGGACA 59.063 33.333 0.00 0.00 0.00 4.02
3461 6721 8.324163 AGTGTGTGAAATAGATAAAGTTGGAC 57.676 34.615 0.00 0.00 0.00 4.02
3462 6722 8.375506 AGAGTGTGTGAAATAGATAAAGTTGGA 58.624 33.333 0.00 0.00 0.00 3.53
3463 6723 8.553459 AGAGTGTGTGAAATAGATAAAGTTGG 57.447 34.615 0.00 0.00 0.00 3.77
3472 6732 9.778741 AGAATTGTAAAGAGTGTGTGAAATAGA 57.221 29.630 0.00 0.00 0.00 1.98
3474 6734 9.778741 AGAGAATTGTAAAGAGTGTGTGAAATA 57.221 29.630 0.00 0.00 0.00 1.40
3475 6735 8.562892 CAGAGAATTGTAAAGAGTGTGTGAAAT 58.437 33.333 0.00 0.00 0.00 2.17
3476 6736 7.768582 TCAGAGAATTGTAAAGAGTGTGTGAAA 59.231 33.333 0.00 0.00 0.00 2.69
3477 6737 7.272244 TCAGAGAATTGTAAAGAGTGTGTGAA 58.728 34.615 0.00 0.00 0.00 3.18
3478 6738 6.816136 TCAGAGAATTGTAAAGAGTGTGTGA 58.184 36.000 0.00 0.00 0.00 3.58
3479 6739 7.386025 TCATCAGAGAATTGTAAAGAGTGTGTG 59.614 37.037 0.00 0.00 0.00 3.82
3480 6740 7.445121 TCATCAGAGAATTGTAAAGAGTGTGT 58.555 34.615 0.00 0.00 0.00 3.72
3481 6741 7.601886 ACTCATCAGAGAATTGTAAAGAGTGTG 59.398 37.037 0.00 0.00 44.98 3.82
3482 6742 7.675062 ACTCATCAGAGAATTGTAAAGAGTGT 58.325 34.615 0.00 0.00 44.98 3.55
3483 6743 8.441608 CAACTCATCAGAGAATTGTAAAGAGTG 58.558 37.037 0.00 0.00 44.98 3.51
3484 6744 8.153550 ACAACTCATCAGAGAATTGTAAAGAGT 58.846 33.333 0.00 0.00 44.98 3.24
3485 6745 8.545229 ACAACTCATCAGAGAATTGTAAAGAG 57.455 34.615 0.00 0.00 44.98 2.85
3486 6746 9.424319 GTACAACTCATCAGAGAATTGTAAAGA 57.576 33.333 9.06 0.00 44.98 2.52
3487 6747 9.429359 AGTACAACTCATCAGAGAATTGTAAAG 57.571 33.333 9.06 0.00 44.98 1.85
3488 6748 9.208022 CAGTACAACTCATCAGAGAATTGTAAA 57.792 33.333 9.06 0.00 44.98 2.01
3489 6749 8.367911 ACAGTACAACTCATCAGAGAATTGTAA 58.632 33.333 9.06 0.00 44.98 2.41
3490 6750 7.896811 ACAGTACAACTCATCAGAGAATTGTA 58.103 34.615 0.00 2.72 44.98 2.41
3491 6751 6.763355 ACAGTACAACTCATCAGAGAATTGT 58.237 36.000 0.00 3.60 44.98 2.71
3492 6752 7.664082 AACAGTACAACTCATCAGAGAATTG 57.336 36.000 0.00 0.00 44.98 2.32
3493 6753 9.209175 GTAAACAGTACAACTCATCAGAGAATT 57.791 33.333 0.00 0.00 44.98 2.17
3499 6759 9.385902 CATTTTGTAAACAGTACAACTCATCAG 57.614 33.333 0.00 0.00 37.18 2.90
3500 6760 7.860373 GCATTTTGTAAACAGTACAACTCATCA 59.140 33.333 0.00 0.00 37.18 3.07
3524 6784 0.112995 AAATCTGCTGGAGGTTGGCA 59.887 50.000 0.00 0.00 34.66 4.92
3527 6787 2.507484 TCACAAATCTGCTGGAGGTTG 58.493 47.619 0.00 3.97 0.00 3.77
3529 6789 3.446442 AATCACAAATCTGCTGGAGGT 57.554 42.857 0.00 0.00 0.00 3.85
3827 7087 8.452989 CATCACAAGATGTTTTTAGTTAAGGC 57.547 34.615 0.00 0.00 45.28 4.35
4078 7338 1.440476 CGGAGTAACTAAGGCCCGG 59.560 63.158 0.00 0.00 33.94 5.73
4182 7443 9.555727 TTTGTTCATATACAGAAGGTATTAGGC 57.444 33.333 0.00 0.00 42.63 3.93
4274 7535 3.464907 CACCTGGCAGATTAGATCACTG 58.535 50.000 17.94 0.00 35.14 3.66
4306 7567 4.478206 TTCGAGAAGAAGAATGGAGCAT 57.522 40.909 0.00 0.00 34.26 3.79
4309 7570 4.633565 CCCTTTTCGAGAAGAAGAATGGAG 59.366 45.833 16.77 0.00 40.40 3.86
4355 7616 5.451242 GGAACAAGTGTGGCAAAAATAGTCA 60.451 40.000 0.00 0.00 0.00 3.41
4441 7721 8.691661 TTACTCCTGCTTTCTTTTGATAGTTT 57.308 30.769 0.00 0.00 31.44 2.66
4442 7722 8.691661 TTTACTCCTGCTTTCTTTTGATAGTT 57.308 30.769 0.00 0.00 31.44 2.24
4443 7723 8.691661 TTTTACTCCTGCTTTCTTTTGATAGT 57.308 30.769 0.00 0.00 31.44 2.12
4444 7724 8.787852 ACTTTTACTCCTGCTTTCTTTTGATAG 58.212 33.333 0.00 0.00 0.00 2.08
4471 7751 1.220749 GTTGCGCTCCAGGTATCCA 59.779 57.895 9.73 0.00 0.00 3.41
4495 7775 0.896923 TGGATGCCCAAAACATGAGC 59.103 50.000 0.00 0.00 40.09 4.26
4530 7810 5.300286 CCTTGGGTATTTCCATCTCATGTTC 59.700 44.000 0.00 0.00 36.58 3.18
4549 7829 4.082245 CCTGTTATGCCTGTTAAACCTTGG 60.082 45.833 0.00 0.00 0.00 3.61
4551 7831 3.509967 GCCTGTTATGCCTGTTAAACCTT 59.490 43.478 0.00 0.00 0.00 3.50
4597 7877 1.818959 TTTGGCACTTGCTGATGGCC 61.819 55.000 0.00 0.00 44.82 5.36
4598 7878 0.248289 ATTTGGCACTTGCTGATGGC 59.752 50.000 0.38 2.06 41.70 4.40
4624 7904 7.753309 ATGTTTTGTTGGCAATGTACTACTA 57.247 32.000 1.92 0.00 34.18 1.82
4658 8014 5.417894 TGACATAGAACCAGTCGTCTAATGT 59.582 40.000 0.00 0.00 35.09 2.71
4659 8015 5.744345 GTGACATAGAACCAGTCGTCTAATG 59.256 44.000 0.00 0.00 35.09 1.90
4660 8016 5.652891 AGTGACATAGAACCAGTCGTCTAAT 59.347 40.000 0.00 0.00 35.09 1.73
4661 8017 5.008331 AGTGACATAGAACCAGTCGTCTAA 58.992 41.667 0.00 0.00 35.09 2.10
4662 8018 4.395231 CAGTGACATAGAACCAGTCGTCTA 59.605 45.833 0.00 0.00 35.09 2.59
4663 8019 3.191581 CAGTGACATAGAACCAGTCGTCT 59.808 47.826 0.00 0.00 35.09 4.18
4664 8020 3.190744 TCAGTGACATAGAACCAGTCGTC 59.809 47.826 0.00 0.00 35.09 4.20
4674 8535 4.081972 GGAGCAAGAACTCAGTGACATAGA 60.082 45.833 0.00 0.00 38.50 1.98
4714 10263 3.134458 GCAATCCTCCCTTGAACTATCG 58.866 50.000 0.00 0.00 0.00 2.92
4723 10272 2.043526 ACAATTCAGGCAATCCTCCCTT 59.956 45.455 0.00 0.00 41.93 3.95
4731 10280 2.229792 ACGTGTCACAATTCAGGCAAT 58.770 42.857 3.42 0.00 0.00 3.56
4761 10310 7.033791 CGACCTTGTGACACTATGTATTTAGT 58.966 38.462 7.20 0.00 32.61 2.24
4762 10311 6.475727 CCGACCTTGTGACACTATGTATTTAG 59.524 42.308 7.20 0.00 0.00 1.85
4769 10318 2.231478 AGTCCGACCTTGTGACACTATG 59.769 50.000 7.20 0.00 0.00 2.23
4771 10320 1.884579 GAGTCCGACCTTGTGACACTA 59.115 52.381 7.20 0.00 0.00 2.74
4772 10321 0.674534 GAGTCCGACCTTGTGACACT 59.325 55.000 7.20 0.00 0.00 3.55
4773 10322 0.663568 CGAGTCCGACCTTGTGACAC 60.664 60.000 0.00 0.00 38.22 3.67
4775 10324 1.080705 CCGAGTCCGACCTTGTGAC 60.081 63.158 0.00 0.00 38.22 3.67
4778 10327 0.826672 AACTCCGAGTCCGACCTTGT 60.827 55.000 0.35 0.00 38.22 3.16
4780 10329 0.602060 GAAACTCCGAGTCCGACCTT 59.398 55.000 0.35 0.00 38.22 3.50
4782 10331 0.109226 CAGAAACTCCGAGTCCGACC 60.109 60.000 0.35 0.00 38.22 4.79
4784 10333 0.894184 AGCAGAAACTCCGAGTCCGA 60.894 55.000 0.35 0.00 38.22 4.55
4786 10335 0.108567 GGAGCAGAAACTCCGAGTCC 60.109 60.000 0.35 0.00 46.52 3.85
4787 10336 3.427309 GGAGCAGAAACTCCGAGTC 57.573 57.895 0.35 0.00 46.52 3.36
4793 10342 0.392327 GAGCCTGGGAGCAGAAACTC 60.392 60.000 0.00 0.00 35.86 3.01
4796 10345 0.254178 GATGAGCCTGGGAGCAGAAA 59.746 55.000 0.00 0.00 34.23 2.52
4797 10346 0.619832 AGATGAGCCTGGGAGCAGAA 60.620 55.000 0.00 0.00 34.23 3.02
4798 10347 1.002662 AGATGAGCCTGGGAGCAGA 59.997 57.895 0.00 0.00 34.23 4.26
4799 10348 1.146485 CAGATGAGCCTGGGAGCAG 59.854 63.158 0.00 0.00 34.23 4.24
4800 10349 3.040206 GCAGATGAGCCTGGGAGCA 62.040 63.158 0.00 0.00 34.82 4.26
4801 10350 2.203181 GCAGATGAGCCTGGGAGC 60.203 66.667 0.00 0.00 34.82 4.70
4802 10351 1.153208 GTGCAGATGAGCCTGGGAG 60.153 63.158 0.00 0.00 34.82 4.30
4803 10352 1.614525 AGTGCAGATGAGCCTGGGA 60.615 57.895 0.00 0.00 34.82 4.37
4804 10353 1.153208 GAGTGCAGATGAGCCTGGG 60.153 63.158 0.00 0.00 34.82 4.45
4805 10354 0.252479 AAGAGTGCAGATGAGCCTGG 59.748 55.000 0.00 0.00 34.82 4.45
4806 10355 2.110901 AAAGAGTGCAGATGAGCCTG 57.889 50.000 0.00 0.00 37.23 4.85
4807 10356 2.875094 AAAAGAGTGCAGATGAGCCT 57.125 45.000 0.00 0.00 0.00 4.58
4808 10357 3.866651 TCTAAAAGAGTGCAGATGAGCC 58.133 45.455 0.00 0.00 0.00 4.70
4809 10358 5.869753 TTTCTAAAAGAGTGCAGATGAGC 57.130 39.130 0.00 0.00 0.00 4.26
4874 10423 1.106351 TTGGCAGCTCTCGGCAAAAA 61.106 50.000 8.80 0.00 44.85 1.94
4875 10424 1.528076 TTGGCAGCTCTCGGCAAAA 60.528 52.632 8.80 0.00 44.85 2.44
4876 10425 2.112928 TTGGCAGCTCTCGGCAAA 59.887 55.556 8.80 0.00 44.85 3.68
4877 10426 0.895100 ATTTTGGCAGCTCTCGGCAA 60.895 50.000 7.35 7.35 45.98 4.52
4878 10427 1.303561 ATTTTGGCAGCTCTCGGCA 60.304 52.632 0.00 0.00 44.79 5.69
4879 10428 1.138247 CATTTTGGCAGCTCTCGGC 59.862 57.895 0.00 0.00 42.19 5.54
4880 10429 0.449388 GACATTTTGGCAGCTCTCGG 59.551 55.000 0.00 0.00 0.00 4.63
4881 10430 0.449388 GGACATTTTGGCAGCTCTCG 59.551 55.000 0.00 0.00 0.00 4.04
4882 10431 1.538047 TGGACATTTTGGCAGCTCTC 58.462 50.000 0.00 0.00 0.00 3.20
4883 10432 1.999648 TTGGACATTTTGGCAGCTCT 58.000 45.000 0.00 0.00 0.00 4.09
4884 10433 2.818130 TTTGGACATTTTGGCAGCTC 57.182 45.000 0.00 0.00 0.00 4.09
4885 10434 2.633967 TCATTTGGACATTTTGGCAGCT 59.366 40.909 0.00 0.00 0.00 4.24
4886 10435 2.997986 CTCATTTGGACATTTTGGCAGC 59.002 45.455 0.00 0.00 0.00 5.25
4887 10436 4.261578 ACTCATTTGGACATTTTGGCAG 57.738 40.909 0.00 0.00 0.00 4.85
4888 10437 4.686191 AACTCATTTGGACATTTTGGCA 57.314 36.364 0.00 0.00 0.00 4.92
4889 10438 7.489574 TTTTAACTCATTTGGACATTTTGGC 57.510 32.000 0.00 0.00 0.00 4.52
4895 10444 9.860898 GCTCTAAATTTTAACTCATTTGGACAT 57.139 29.630 0.00 0.00 29.68 3.06
4896 10445 8.020819 CGCTCTAAATTTTAACTCATTTGGACA 58.979 33.333 0.00 0.00 29.68 4.02
4897 10446 7.484959 CCGCTCTAAATTTTAACTCATTTGGAC 59.515 37.037 0.00 0.00 29.68 4.02
4898 10447 7.392113 TCCGCTCTAAATTTTAACTCATTTGGA 59.608 33.333 0.00 0.00 31.36 3.53
4899 10448 7.484959 GTCCGCTCTAAATTTTAACTCATTTGG 59.515 37.037 0.00 0.00 0.00 3.28
4900 10449 7.484959 GGTCCGCTCTAAATTTTAACTCATTTG 59.515 37.037 0.00 0.00 0.00 2.32
4901 10450 7.393515 AGGTCCGCTCTAAATTTTAACTCATTT 59.606 33.333 0.00 0.00 0.00 2.32
4902 10451 6.884836 AGGTCCGCTCTAAATTTTAACTCATT 59.115 34.615 0.00 0.00 0.00 2.57
4903 10452 6.415573 AGGTCCGCTCTAAATTTTAACTCAT 58.584 36.000 0.00 0.00 0.00 2.90
4904 10453 5.801380 AGGTCCGCTCTAAATTTTAACTCA 58.199 37.500 0.00 0.00 0.00 3.41
4905 10454 5.873164 TGAGGTCCGCTCTAAATTTTAACTC 59.127 40.000 0.00 0.00 0.00 3.01
4906 10455 5.642491 GTGAGGTCCGCTCTAAATTTTAACT 59.358 40.000 0.00 0.00 0.00 2.24
4907 10456 5.445540 CGTGAGGTCCGCTCTAAATTTTAAC 60.446 44.000 0.00 0.00 0.00 2.01
4908 10457 4.628333 CGTGAGGTCCGCTCTAAATTTTAA 59.372 41.667 0.00 0.00 0.00 1.52
4909 10458 4.178540 CGTGAGGTCCGCTCTAAATTTTA 58.821 43.478 0.00 0.00 0.00 1.52
4910 10459 3.000727 CGTGAGGTCCGCTCTAAATTTT 58.999 45.455 0.00 0.00 0.00 1.82
4911 10460 2.618053 CGTGAGGTCCGCTCTAAATTT 58.382 47.619 0.00 0.00 0.00 1.82
4912 10461 2.295253 CGTGAGGTCCGCTCTAAATT 57.705 50.000 0.00 0.00 0.00 1.82
4921 10470 1.086696 AATTTGATGCGTGAGGTCCG 58.913 50.000 0.00 0.00 0.00 4.79
4922 10471 4.130118 AGATAATTTGATGCGTGAGGTCC 58.870 43.478 0.00 0.00 0.00 4.46
4923 10472 6.646653 TGATAGATAATTTGATGCGTGAGGTC 59.353 38.462 0.00 0.00 0.00 3.85
4924 10473 6.425114 GTGATAGATAATTTGATGCGTGAGGT 59.575 38.462 0.00 0.00 0.00 3.85
4925 10474 6.128445 GGTGATAGATAATTTGATGCGTGAGG 60.128 42.308 0.00 0.00 0.00 3.86
4926 10475 6.128445 GGGTGATAGATAATTTGATGCGTGAG 60.128 42.308 0.00 0.00 0.00 3.51
4927 10476 5.700832 GGGTGATAGATAATTTGATGCGTGA 59.299 40.000 0.00 0.00 0.00 4.35
4928 10477 5.702670 AGGGTGATAGATAATTTGATGCGTG 59.297 40.000 0.00 0.00 0.00 5.34
4929 10478 5.869579 AGGGTGATAGATAATTTGATGCGT 58.130 37.500 0.00 0.00 0.00 5.24
4930 10479 5.934043 TGAGGGTGATAGATAATTTGATGCG 59.066 40.000 0.00 0.00 0.00 4.73
4931 10480 7.750229 TTGAGGGTGATAGATAATTTGATGC 57.250 36.000 0.00 0.00 0.00 3.91
5000 10549 3.513912 TCATCTACTCCCGCTCAGAAAAA 59.486 43.478 0.00 0.00 0.00 1.94
5001 10550 3.096852 TCATCTACTCCCGCTCAGAAAA 58.903 45.455 0.00 0.00 0.00 2.29
5002 10551 2.690497 CTCATCTACTCCCGCTCAGAAA 59.310 50.000 0.00 0.00 0.00 2.52
5003 10552 2.302260 CTCATCTACTCCCGCTCAGAA 58.698 52.381 0.00 0.00 0.00 3.02
5004 10553 1.974265 CTCATCTACTCCCGCTCAGA 58.026 55.000 0.00 0.00 0.00 3.27
5005 10554 0.313672 GCTCATCTACTCCCGCTCAG 59.686 60.000 0.00 0.00 0.00 3.35
5006 10555 1.109920 GGCTCATCTACTCCCGCTCA 61.110 60.000 0.00 0.00 0.00 4.26
5007 10556 0.825840 AGGCTCATCTACTCCCGCTC 60.826 60.000 0.00 0.00 0.00 5.03
5008 10557 1.112315 CAGGCTCATCTACTCCCGCT 61.112 60.000 0.00 0.00 0.00 5.52
5009 10558 1.365633 CAGGCTCATCTACTCCCGC 59.634 63.158 0.00 0.00 0.00 6.13
5010 10559 1.467678 CCCAGGCTCATCTACTCCCG 61.468 65.000 0.00 0.00 0.00 5.14
5011 10560 1.763546 GCCCAGGCTCATCTACTCCC 61.764 65.000 0.08 0.00 38.26 4.30
5012 10561 1.050988 TGCCCAGGCTCATCTACTCC 61.051 60.000 10.58 0.00 42.51 3.85
5013 10562 0.105778 GTGCCCAGGCTCATCTACTC 59.894 60.000 10.58 0.00 42.51 2.59
5014 10563 1.341156 GGTGCCCAGGCTCATCTACT 61.341 60.000 10.58 0.00 42.51 2.57
5015 10564 1.147153 GGTGCCCAGGCTCATCTAC 59.853 63.158 10.58 0.00 42.51 2.59
5016 10565 2.434843 CGGTGCCCAGGCTCATCTA 61.435 63.158 10.58 0.00 42.51 1.98
5017 10566 3.790437 CGGTGCCCAGGCTCATCT 61.790 66.667 10.58 0.00 42.51 2.90
5018 10567 3.746949 CTCGGTGCCCAGGCTCATC 62.747 68.421 10.58 0.00 42.51 2.92
5019 10568 3.790437 CTCGGTGCCCAGGCTCAT 61.790 66.667 10.58 0.00 42.51 2.90
5021 10570 4.021925 AACTCGGTGCCCAGGCTC 62.022 66.667 10.58 6.18 42.51 4.70
5022 10571 4.335647 CAACTCGGTGCCCAGGCT 62.336 66.667 10.58 0.00 42.51 4.58
5024 10573 2.484287 AATCCAACTCGGTGCCCAGG 62.484 60.000 0.00 0.00 35.57 4.45
5025 10574 0.609131 AAATCCAACTCGGTGCCCAG 60.609 55.000 0.00 0.00 35.57 4.45
5026 10575 0.608035 GAAATCCAACTCGGTGCCCA 60.608 55.000 0.00 0.00 35.57 5.36
5027 10576 1.313091 GGAAATCCAACTCGGTGCCC 61.313 60.000 0.00 0.00 35.57 5.36
5028 10577 0.608035 TGGAAATCCAACTCGGTGCC 60.608 55.000 0.00 0.00 44.35 5.01
5029 10578 0.804989 CTGGAAATCCAACTCGGTGC 59.195 55.000 3.35 0.00 46.97 5.01
5030 10579 1.806542 CACTGGAAATCCAACTCGGTG 59.193 52.381 3.35 4.25 46.97 4.94
5031 10580 1.420138 ACACTGGAAATCCAACTCGGT 59.580 47.619 3.35 0.00 46.97 4.69
5032 10581 2.076863 GACACTGGAAATCCAACTCGG 58.923 52.381 3.35 0.00 46.97 4.63
5033 10582 2.766313 TGACACTGGAAATCCAACTCG 58.234 47.619 3.35 0.00 46.97 4.18
5034 10583 5.514274 TTTTGACACTGGAAATCCAACTC 57.486 39.130 3.35 0.00 46.97 3.01
5035 10584 5.930837 TTTTTGACACTGGAAATCCAACT 57.069 34.783 3.35 0.00 46.97 3.16
5036 10585 5.050159 GCATTTTTGACACTGGAAATCCAAC 60.050 40.000 3.35 0.00 46.97 3.77
5037 10586 5.055812 GCATTTTTGACACTGGAAATCCAA 58.944 37.500 3.35 0.00 46.97 3.53
5038 10587 4.344679 AGCATTTTTGACACTGGAAATCCA 59.655 37.500 1.53 1.53 45.30 3.41
5039 10588 4.886579 AGCATTTTTGACACTGGAAATCC 58.113 39.130 0.00 0.00 0.00 3.01
5040 10589 6.583806 CAGTAGCATTTTTGACACTGGAAATC 59.416 38.462 0.00 0.00 31.83 2.17
5041 10590 6.040842 ACAGTAGCATTTTTGACACTGGAAAT 59.959 34.615 0.00 0.00 38.13 2.17
5042 10591 5.359576 ACAGTAGCATTTTTGACACTGGAAA 59.640 36.000 0.00 0.00 38.13 3.13
5043 10592 4.887071 ACAGTAGCATTTTTGACACTGGAA 59.113 37.500 0.00 0.00 38.13 3.53
5044 10593 4.460263 ACAGTAGCATTTTTGACACTGGA 58.540 39.130 0.00 0.00 38.13 3.86
5045 10594 4.836125 ACAGTAGCATTTTTGACACTGG 57.164 40.909 0.00 0.00 38.13 4.00
5056 10605 9.817809 CGTCCCATAATATAATACAGTAGCATT 57.182 33.333 0.00 0.00 0.00 3.56
5057 10606 8.421784 CCGTCCCATAATATAATACAGTAGCAT 58.578 37.037 0.00 0.00 0.00 3.79
5058 10607 7.616542 TCCGTCCCATAATATAATACAGTAGCA 59.383 37.037 0.00 0.00 0.00 3.49
5059 10608 8.004087 TCCGTCCCATAATATAATACAGTAGC 57.996 38.462 0.00 0.00 0.00 3.58
5060 10609 8.630917 CCTCCGTCCCATAATATAATACAGTAG 58.369 40.741 0.00 0.00 0.00 2.57
5061 10610 8.338493 TCCTCCGTCCCATAATATAATACAGTA 58.662 37.037 0.00 0.00 0.00 2.74
5062 10611 7.186972 TCCTCCGTCCCATAATATAATACAGT 58.813 38.462 0.00 0.00 0.00 3.55
5063 10612 7.655521 TCCTCCGTCCCATAATATAATACAG 57.344 40.000 0.00 0.00 0.00 2.74
5064 10613 7.676893 ACTTCCTCCGTCCCATAATATAATACA 59.323 37.037 0.00 0.00 0.00 2.29
5065 10614 8.075761 ACTTCCTCCGTCCCATAATATAATAC 57.924 38.462 0.00 0.00 0.00 1.89
5066 10615 9.947189 ATACTTCCTCCGTCCCATAATATAATA 57.053 33.333 0.00 0.00 0.00 0.98
5067 10616 8.855804 ATACTTCCTCCGTCCCATAATATAAT 57.144 34.615 0.00 0.00 0.00 1.28
5068 10617 9.947189 ATATACTTCCTCCGTCCCATAATATAA 57.053 33.333 0.00 0.00 0.00 0.98
5069 10618 9.947189 AATATACTTCCTCCGTCCCATAATATA 57.053 33.333 0.00 0.00 0.00 0.86
5070 10619 8.855804 AATATACTTCCTCCGTCCCATAATAT 57.144 34.615 0.00 0.00 0.00 1.28
5071 10620 8.120538 AGAATATACTTCCTCCGTCCCATAATA 58.879 37.037 0.00 0.00 0.00 0.98
5072 10621 6.960542 AGAATATACTTCCTCCGTCCCATAAT 59.039 38.462 0.00 0.00 0.00 1.28
5073 10622 6.210784 CAGAATATACTTCCTCCGTCCCATAA 59.789 42.308 0.00 0.00 0.00 1.90
5074 10623 5.715279 CAGAATATACTTCCTCCGTCCCATA 59.285 44.000 0.00 0.00 0.00 2.74
5075 10624 4.528596 CAGAATATACTTCCTCCGTCCCAT 59.471 45.833 0.00 0.00 0.00 4.00
5076 10625 3.895656 CAGAATATACTTCCTCCGTCCCA 59.104 47.826 0.00 0.00 0.00 4.37
5077 10626 4.150359 TCAGAATATACTTCCTCCGTCCC 58.850 47.826 0.00 0.00 0.00 4.46
5078 10627 5.509332 GGTTCAGAATATACTTCCTCCGTCC 60.509 48.000 0.00 0.00 0.00 4.79
5079 10628 5.068723 TGGTTCAGAATATACTTCCTCCGTC 59.931 44.000 0.00 0.00 0.00 4.79
5080 10629 4.960469 TGGTTCAGAATATACTTCCTCCGT 59.040 41.667 0.00 0.00 0.00 4.69
5081 10630 5.531122 TGGTTCAGAATATACTTCCTCCG 57.469 43.478 0.00 0.00 0.00 4.63
5082 10631 6.099845 TCCTTGGTTCAGAATATACTTCCTCC 59.900 42.308 0.00 0.00 0.00 4.30
5083 10632 7.125792 TCCTTGGTTCAGAATATACTTCCTC 57.874 40.000 0.00 0.00 0.00 3.71
5084 10633 7.510675 TTCCTTGGTTCAGAATATACTTCCT 57.489 36.000 0.00 0.00 0.00 3.36
5085 10634 7.610305 TGTTTCCTTGGTTCAGAATATACTTCC 59.390 37.037 0.00 0.00 0.00 3.46
5086 10635 8.561738 TGTTTCCTTGGTTCAGAATATACTTC 57.438 34.615 0.00 0.00 0.00 3.01
5087 10636 8.934023 TTGTTTCCTTGGTTCAGAATATACTT 57.066 30.769 0.00 0.00 0.00 2.24
5088 10637 8.383175 TCTTGTTTCCTTGGTTCAGAATATACT 58.617 33.333 0.00 0.00 0.00 2.12
5089 10638 8.561738 TCTTGTTTCCTTGGTTCAGAATATAC 57.438 34.615 0.00 0.00 0.00 1.47
5090 10639 7.829211 CCTCTTGTTTCCTTGGTTCAGAATATA 59.171 37.037 0.00 0.00 0.00 0.86
5091 10640 6.660949 CCTCTTGTTTCCTTGGTTCAGAATAT 59.339 38.462 0.00 0.00 0.00 1.28
5092 10641 6.003950 CCTCTTGTTTCCTTGGTTCAGAATA 58.996 40.000 0.00 0.00 0.00 1.75
5093 10642 4.829492 CCTCTTGTTTCCTTGGTTCAGAAT 59.171 41.667 0.00 0.00 0.00 2.40
5094 10643 4.207165 CCTCTTGTTTCCTTGGTTCAGAA 58.793 43.478 0.00 0.00 0.00 3.02
5095 10644 3.202151 ACCTCTTGTTTCCTTGGTTCAGA 59.798 43.478 0.00 0.00 0.00 3.27
5096 10645 3.555966 ACCTCTTGTTTCCTTGGTTCAG 58.444 45.455 0.00 0.00 0.00 3.02
5097 10646 3.662759 ACCTCTTGTTTCCTTGGTTCA 57.337 42.857 0.00 0.00 0.00 3.18
5098 10647 4.682787 CAAACCTCTTGTTTCCTTGGTTC 58.317 43.478 0.00 0.00 45.35 3.62
5099 10648 3.118775 GCAAACCTCTTGTTTCCTTGGTT 60.119 43.478 0.00 0.00 45.35 3.67
5100 10649 2.430694 GCAAACCTCTTGTTTCCTTGGT 59.569 45.455 0.00 0.00 45.35 3.67
5101 10650 2.224042 GGCAAACCTCTTGTTTCCTTGG 60.224 50.000 0.00 0.00 45.35 3.61
5102 10651 2.695147 AGGCAAACCTCTTGTTTCCTTG 59.305 45.455 0.00 0.00 46.34 3.61
5103 10652 3.032265 AGGCAAACCTCTTGTTTCCTT 57.968 42.857 0.00 0.00 46.34 3.36
5104 10653 2.755952 AGGCAAACCTCTTGTTTCCT 57.244 45.000 0.00 0.00 46.34 3.36
5128 10677 1.538512 CCACTGGATCAAGCACAACTG 59.461 52.381 0.00 0.00 0.00 3.16
5129 10678 1.421268 TCCACTGGATCAAGCACAACT 59.579 47.619 0.00 0.00 0.00 3.16
5130 10679 1.537202 GTCCACTGGATCAAGCACAAC 59.463 52.381 0.00 0.00 32.73 3.32
5131 10680 1.545428 GGTCCACTGGATCAAGCACAA 60.545 52.381 3.15 0.00 32.11 3.33
5132 10681 0.036732 GGTCCACTGGATCAAGCACA 59.963 55.000 3.15 0.00 32.11 4.57
5133 10682 0.326264 AGGTCCACTGGATCAAGCAC 59.674 55.000 11.13 0.00 34.77 4.40
5134 10683 0.615331 GAGGTCCACTGGATCAAGCA 59.385 55.000 11.13 0.00 34.77 3.91
5135 10684 0.615331 TGAGGTCCACTGGATCAAGC 59.385 55.000 11.13 0.58 34.77 4.01
5150 10700 2.356793 GCCGGATGCTCGATGAGG 60.357 66.667 5.05 0.00 36.87 3.86
5188 10738 3.003480 GTTTTTCTGGACCAGATCTCCG 58.997 50.000 24.85 0.00 40.39 4.63
5269 10819 2.107204 GGGCATTATGGTGTCCATCTCT 59.893 50.000 4.45 0.00 40.74 3.10


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.