Multiple sequence alignment - TraesCS4B01G035600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G035600 chr4B 100.000 4836 0 0 1 4836 25885444 25890279 0.000000e+00 8931.0
1 TraesCS4B01G035600 chr4D 91.483 2853 144 38 705 3486 15368637 15371461 0.000000e+00 3831.0
2 TraesCS4B01G035600 chr4D 89.219 538 27 13 3589 4101 15371795 15372326 1.130000e-180 643.0
3 TraesCS4B01G035600 chr4D 84.950 299 27 9 4439 4720 15372508 15372805 2.200000e-73 287.0
4 TraesCS4B01G035600 chr4D 87.117 163 11 4 4074 4230 15372341 15372499 4.970000e-40 176.0
5 TraesCS4B01G035600 chr4D 83.051 118 5 2 3488 3590 15371517 15371634 5.150000e-15 93.5
6 TraesCS4B01G035600 chr4A 90.802 1620 83 29 706 2300 585401142 585399564 0.000000e+00 2106.0
7 TraesCS4B01G035600 chr4A 98.014 705 12 2 1 705 523046564 523045862 0.000000e+00 1223.0
8 TraesCS4B01G035600 chr4A 88.376 628 50 11 2282 2899 585398756 585398142 0.000000e+00 734.0
9 TraesCS4B01G035600 chr4A 89.022 583 49 10 2282 2854 585399382 585398805 0.000000e+00 708.0
10 TraesCS4B01G035600 chr4A 82.465 787 51 29 3488 4230 585397385 585396642 4.140000e-170 608.0
11 TraesCS4B01G035600 chr4A 84.615 637 52 18 2897 3495 585398065 585397437 4.170000e-165 592.0
12 TraesCS4B01G035600 chr4A 96.585 205 5 2 4231 4435 588185874 588185672 6.000000e-89 339.0
13 TraesCS4B01G035600 chr4A 96.098 205 7 1 4233 4437 697946149 697946352 2.790000e-87 333.0
14 TraesCS4B01G035600 chr4A 85.870 276 22 8 4460 4720 585396609 585396336 1.330000e-70 278.0
15 TraesCS4B01G035600 chr7B 96.875 704 19 3 1 704 621617986 621618686 0.000000e+00 1175.0
16 TraesCS4B01G035600 chr7B 97.238 181 4 1 525 705 192089979 192089800 6.080000e-79 305.0
17 TraesCS4B01G035600 chr7B 94.643 56 3 0 2874 2929 394824345 394824290 2.400000e-13 87.9
18 TraesCS4B01G035600 chr7B 90.476 63 4 1 2870 2930 489271598 489271660 1.120000e-11 82.4
19 TraesCS4B01G035600 chr5B 96.728 703 21 2 2 704 231023250 231022550 0.000000e+00 1170.0
20 TraesCS4B01G035600 chr5B 96.601 706 15 5 1 706 492298232 492297536 0.000000e+00 1162.0
21 TraesCS4B01G035600 chr5B 88.086 512 38 13 2309 2812 672542239 672541743 1.940000e-163 586.0
22 TraesCS4B01G035600 chr1B 96.312 705 26 0 1 705 41730618 41729914 0.000000e+00 1158.0
23 TraesCS4B01G035600 chr3B 86.294 912 98 15 1281 2182 69992711 69993605 0.000000e+00 966.0
24 TraesCS4B01G035600 chr3B 86.525 705 54 22 2496 3168 69994298 69994993 0.000000e+00 737.0
25 TraesCS4B01G035600 chr3B 91.497 294 19 2 2173 2466 69994008 69994295 2.710000e-107 399.0
26 TraesCS4B01G035600 chr3B 95.283 212 6 4 4232 4442 723787686 723787894 2.790000e-87 333.0
27 TraesCS4B01G035600 chr3B 98.333 180 3 0 525 704 799001205 799001026 2.810000e-82 316.0
28 TraesCS4B01G035600 chr3B 96.429 56 2 0 2874 2929 328604152 328604207 5.150000e-15 93.5
29 TraesCS4B01G035600 chr2B 98.138 537 9 1 1 537 606785425 606785960 0.000000e+00 935.0
30 TraesCS4B01G035600 chr2B 88.824 510 37 11 2309 2812 183535917 183535422 4.140000e-170 608.0
31 TraesCS4B01G035600 chr2B 96.330 109 4 0 459 567 747675200 747675308 3.850000e-41 180.0
32 TraesCS4B01G035600 chr2B 98.000 50 1 0 2881 2930 52111589 52111540 2.400000e-13 87.9
33 TraesCS4B01G035600 chr2B 94.643 56 3 0 2874 2929 118095924 118095869 2.400000e-13 87.9
34 TraesCS4B01G035600 chr6D 94.923 453 22 1 2 454 75294303 75293852 0.000000e+00 708.0
35 TraesCS4B01G035600 chr5D 94.336 459 24 2 1 459 437906487 437906031 0.000000e+00 702.0
36 TraesCS4B01G035600 chr5D 93.173 249 15 1 459 707 309059448 309059202 9.890000e-97 364.0
37 TraesCS4B01G035600 chr1D 94.323 458 25 1 2 459 5694009 5693553 0.000000e+00 701.0
38 TraesCS4B01G035600 chr6B 88.867 503 39 8 2309 2807 599818386 599818875 1.930000e-168 603.0
39 TraesCS4B01G035600 chr3D 87.623 509 46 9 2302 2807 424218487 424218981 4.200000e-160 575.0
40 TraesCS4B01G035600 chr3A 96.618 207 5 2 4231 4437 596278387 596278183 4.630000e-90 342.0
41 TraesCS4B01G035600 chr3A 94.860 214 10 1 4230 4443 482612187 482612399 2.790000e-87 333.0
42 TraesCS4B01G035600 chr3A 95.238 210 9 1 4228 4437 699767489 699767697 1.000000e-86 331.0
43 TraesCS4B01G035600 chr7A 96.135 207 6 2 4231 4437 225247772 225247568 2.160000e-88 337.0
44 TraesCS4B01G035600 chr7A 96.135 207 6 2 4231 4437 550415403 550415607 2.160000e-88 337.0
45 TraesCS4B01G035600 chr7A 94.643 56 3 0 2874 2929 679416116 679416171 2.400000e-13 87.9
46 TraesCS4B01G035600 chr5A 95.673 208 7 2 4230 4437 106457145 106457350 2.790000e-87 333.0
47 TraesCS4B01G035600 chr6A 97.238 181 4 1 525 705 479111827 479112006 6.080000e-79 305.0
48 TraesCS4B01G035600 chr2A 94.643 56 3 0 2874 2929 74111425 74111480 2.400000e-13 87.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G035600 chr4B 25885444 25890279 4835 False 8931.000000 8931 100.000000 1 4836 1 chr4B.!!$F1 4835
1 TraesCS4B01G035600 chr4D 15368637 15372805 4168 False 1006.100000 3831 87.164000 705 4720 5 chr4D.!!$F1 4015
2 TraesCS4B01G035600 chr4A 523045862 523046564 702 True 1223.000000 1223 98.014000 1 705 1 chr4A.!!$R1 704
3 TraesCS4B01G035600 chr4A 585396336 585401142 4806 True 837.666667 2106 86.858333 706 4720 6 chr4A.!!$R3 4014
4 TraesCS4B01G035600 chr7B 621617986 621618686 700 False 1175.000000 1175 96.875000 1 704 1 chr7B.!!$F2 703
5 TraesCS4B01G035600 chr5B 231022550 231023250 700 True 1170.000000 1170 96.728000 2 704 1 chr5B.!!$R1 702
6 TraesCS4B01G035600 chr5B 492297536 492298232 696 True 1162.000000 1162 96.601000 1 706 1 chr5B.!!$R2 705
7 TraesCS4B01G035600 chr1B 41729914 41730618 704 True 1158.000000 1158 96.312000 1 705 1 chr1B.!!$R1 704
8 TraesCS4B01G035600 chr3B 69992711 69994993 2282 False 700.666667 966 88.105333 1281 3168 3 chr3B.!!$F3 1887
9 TraesCS4B01G035600 chr2B 606785425 606785960 535 False 935.000000 935 98.138000 1 537 1 chr2B.!!$F1 536

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
19 20 0.830648 CGGAAGTAATGGAGGCCTCA 59.169 55.000 33.29 19.8 0.00 3.86 F
826 829 2.354510 TCACGAGTCAACAGCAAAAAGG 59.645 45.455 0.00 0.0 0.00 3.11 F
1642 1667 0.178533 TGGAACCCTAATTACCGCCG 59.821 55.000 0.00 0.0 0.00 6.46 F
1714 1740 1.017387 CTCTAATTCGGTGCCCTTGC 58.983 55.000 0.00 0.0 38.26 4.01 F
3067 4471 1.074405 TGAAAGCCTGGAGAGCATGTT 59.926 47.619 0.00 0.0 0.00 2.71 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1386 1411 0.032952 GCTTGCCACGATACCCGATA 59.967 55.000 0.00 0.0 41.76 2.92 R
1705 1731 1.373748 CACATTGCAGCAAGGGCAC 60.374 57.895 23.03 0.0 44.61 5.01 R
3195 4599 0.118346 ATAGGGACACCACACCAGGA 59.882 55.000 0.00 0.0 40.13 3.86 R
3472 4914 0.474854 TAACAGACAGGGCCCCAAGA 60.475 55.000 21.43 0.0 0.00 3.02 R
4426 6181 0.035739 ACGTAAACGATGGCCCTGTT 59.964 50.000 9.86 0.0 43.02 3.16 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 0.830648 CGGAAGTAATGGAGGCCTCA 59.169 55.000 33.29 19.80 0.00 3.86
40 41 4.853276 TCACCAGAGTAAGGGGGAAAATTA 59.147 41.667 0.00 0.00 32.48 1.40
386 388 7.658525 AATGTGCATAAGGATCCAAACAATA 57.341 32.000 15.82 0.00 0.00 1.90
734 736 8.438676 AGATTAAACCGGTAGATTTTGAGATG 57.561 34.615 8.00 0.00 0.00 2.90
746 748 4.811555 TTTTGAGATGGACAAAGTCGTG 57.188 40.909 0.00 0.00 38.25 4.35
826 829 2.354510 TCACGAGTCAACAGCAAAAAGG 59.645 45.455 0.00 0.00 0.00 3.11
905 920 2.494073 CGAGAGCTCCCTCACTTTAACT 59.506 50.000 10.93 0.00 40.68 2.24
920 935 6.072728 TCACTTTAACTTCCAATCAACCGATG 60.073 38.462 0.00 0.00 30.13 3.84
951 966 2.567497 TTGCTCAGCCTTGCAAGCC 61.567 57.895 21.43 10.59 43.17 4.35
1104 1129 4.477975 CTCCACGACGCCGACCTC 62.478 72.222 0.00 0.00 39.50 3.85
1242 1267 4.787280 CTCTGGCCCTCCGACCCT 62.787 72.222 0.00 0.00 34.14 4.34
1364 1389 3.843240 CAACCTCTTCGCGCTCGC 61.843 66.667 5.56 3.90 35.26 5.03
1392 1417 2.248724 CTCGACGTCGCTATCGGG 59.751 66.667 32.19 5.17 38.86 5.14
1395 1420 0.601046 TCGACGTCGCTATCGGGTAT 60.601 55.000 32.19 0.00 38.86 2.73
1398 1423 0.882042 ACGTCGCTATCGGGTATCGT 60.882 55.000 0.00 0.00 40.32 3.73
1402 1427 1.663739 GCTATCGGGTATCGTGGCA 59.336 57.895 0.00 0.00 40.32 4.92
1519 1544 1.384989 CGAGGACGCCATCTACCTGT 61.385 60.000 0.00 0.00 32.53 4.00
1614 1639 4.003788 AGCGTCCCCGTCAAGGTG 62.004 66.667 0.00 0.00 38.74 4.00
1639 1664 1.578583 CGCTGGAACCCTAATTACCG 58.421 55.000 0.00 0.00 0.00 4.02
1640 1665 1.306148 GCTGGAACCCTAATTACCGC 58.694 55.000 0.00 0.00 0.00 5.68
1641 1666 1.963172 CTGGAACCCTAATTACCGCC 58.037 55.000 0.00 0.00 0.00 6.13
1642 1667 0.178533 TGGAACCCTAATTACCGCCG 59.821 55.000 0.00 0.00 0.00 6.46
1705 1731 2.969628 ACTGCCTGTCTCTAATTCGG 57.030 50.000 0.00 0.00 0.00 4.30
1707 1733 2.093973 ACTGCCTGTCTCTAATTCGGTG 60.094 50.000 0.00 0.00 0.00 4.94
1708 1734 1.291132 GCCTGTCTCTAATTCGGTGC 58.709 55.000 0.00 0.00 0.00 5.01
1714 1740 1.017387 CTCTAATTCGGTGCCCTTGC 58.983 55.000 0.00 0.00 38.26 4.01
1783 1813 6.636562 ATCGTTAGGATCTGACGTCTAATT 57.363 37.500 17.92 0.00 42.61 1.40
1806 1836 5.450453 TGACCTCCCAAACAAACAGAATTA 58.550 37.500 0.00 0.00 0.00 1.40
1807 1837 5.534654 TGACCTCCCAAACAAACAGAATTAG 59.465 40.000 0.00 0.00 0.00 1.73
1808 1838 4.832823 ACCTCCCAAACAAACAGAATTAGG 59.167 41.667 0.00 0.00 0.00 2.69
1896 1931 1.807755 GCAGCTCTGGATTGCGATACA 60.808 52.381 0.00 0.00 0.00 2.29
1942 1992 4.023980 TGGTAATCAGTCTACCAGGAGTG 58.976 47.826 0.00 0.00 43.11 3.51
2011 2061 5.498700 CGAATCACGATTCAGTAAACTTCGG 60.499 44.000 17.53 0.00 45.60 4.30
2068 2121 9.565213 CTCTTCATCTTTCCATAATTGTTTGTC 57.435 33.333 0.00 0.00 0.00 3.18
2195 2660 3.620488 TGAGCAGGTTCTGTTTTTCTGT 58.380 40.909 0.00 0.00 33.43 3.41
2494 3161 4.305989 TGCTTCACATGTTTGAGGAAAC 57.694 40.909 0.00 0.00 41.72 2.78
2716 3392 3.660865 AGTTGTTTTACAGACTAGGCGG 58.339 45.455 0.00 0.00 0.00 6.13
2734 3410 2.229302 GCGGTGGCCATTTTAAACACTA 59.771 45.455 9.72 0.00 32.88 2.74
2768 3445 5.751028 GCAGTGAAACCTCTATATCAGTCAC 59.249 44.000 0.00 0.00 37.80 3.67
2769 3446 6.628175 GCAGTGAAACCTCTATATCAGTCACA 60.628 42.308 0.00 0.00 37.80 3.58
2776 3453 4.586421 CCTCTATATCAGTCACAAGCTGGA 59.414 45.833 0.00 0.00 34.89 3.86
2777 3454 5.508825 CCTCTATATCAGTCACAAGCTGGAC 60.509 48.000 0.00 0.00 34.89 4.02
2879 4174 1.538047 TTTCTCATGTTCAGGGCAGC 58.462 50.000 0.00 0.00 0.00 5.25
2899 4194 5.163622 GCAGCGGGCATCATATATTTTGTAT 60.164 40.000 0.00 0.00 43.97 2.29
2932 4306 5.048782 TGCAAAGTAGGACAGTTTAATGCTG 60.049 40.000 6.14 6.14 39.67 4.41
2933 4307 5.393962 CAAAGTAGGACAGTTTAATGCTGC 58.606 41.667 7.28 0.00 37.47 5.25
2935 4309 2.472695 AGGACAGTTTAATGCTGCGA 57.527 45.000 7.28 0.00 37.47 5.10
2959 4359 7.918033 CGATGATAGACTGAGAGTGTTACATTT 59.082 37.037 0.00 0.00 0.00 2.32
3067 4471 1.074405 TGAAAGCCTGGAGAGCATGTT 59.926 47.619 0.00 0.00 0.00 2.71
3139 4543 6.934083 TGCTGTAGAAATTGTGACTATGTTCA 59.066 34.615 0.00 0.00 0.00 3.18
3151 4555 2.910319 ACTATGTTCACCAAGCTGGGTA 59.090 45.455 14.01 0.00 43.37 3.69
3173 4577 3.508402 ACTTTGGTGTCTGGTTTCGTTTT 59.492 39.130 0.00 0.00 0.00 2.43
3178 4582 3.431856 GTGTCTGGTTTCGTTTTGTTCC 58.568 45.455 0.00 0.00 0.00 3.62
3180 4584 3.119779 TGTCTGGTTTCGTTTTGTTCCAC 60.120 43.478 0.00 0.00 0.00 4.02
3185 4589 3.095738 GTTTCGTTTTGTTCCACAGACG 58.904 45.455 7.96 7.96 39.31 4.18
3188 4592 3.117794 TCGTTTTGTTCCACAGACGTAG 58.882 45.455 11.92 0.00 39.13 3.51
3229 4634 4.070009 GTCCCTATTAAACGCTATTGGGG 58.930 47.826 0.00 0.00 37.40 4.96
3274 4691 5.196341 TGATAGTGGAATGGTGTCGTATC 57.804 43.478 0.00 0.00 0.00 2.24
3279 4702 3.061697 GTGGAATGGTGTCGTATCGTTTC 59.938 47.826 0.00 0.00 0.00 2.78
3283 4706 4.921470 ATGGTGTCGTATCGTTTCTTTG 57.079 40.909 0.00 0.00 0.00 2.77
3284 4707 3.719924 TGGTGTCGTATCGTTTCTTTGT 58.280 40.909 0.00 0.00 0.00 2.83
3299 4722 2.433604 TCTTTGTGGCATTTCAGGCAAA 59.566 40.909 0.00 0.00 46.19 3.68
3311 4734 7.293018 GCATTTCAGGCAAAAGAAACTAATTG 58.707 34.615 0.00 0.00 36.65 2.32
3320 4762 7.222654 GCAAAAGAAACTAATTGCTGATTTCG 58.777 34.615 11.93 0.00 43.58 3.46
3348 4790 6.258068 GTGAAGTATCTTATGTGTTACCTGGC 59.742 42.308 0.00 0.00 0.00 4.85
3395 4837 7.430992 TTGATCTTGTTGAGATGTTCTTCAG 57.569 36.000 0.00 0.00 45.17 3.02
3472 4914 3.446873 TGCATCAAACAAGAGTTGTGGTT 59.553 39.130 0.00 0.00 44.59 3.67
3474 4916 4.202050 GCATCAAACAAGAGTTGTGGTTCT 60.202 41.667 0.00 0.00 44.59 3.01
3537 5037 6.931281 AGTTTATCGCATTATCTAGTGCATGT 59.069 34.615 5.68 0.00 38.65 3.21
3650 5327 9.551734 TCTCAATTTATGGTCATCATACTGAAG 57.448 33.333 0.00 0.00 38.01 3.02
3682 5359 1.211457 CTGTTGCAGGGGAGAATAGCT 59.789 52.381 0.00 0.00 0.00 3.32
3770 5447 5.421277 TGAACTTTGAACTCAGTTTACCGA 58.579 37.500 0.00 0.00 33.22 4.69
3773 5450 4.809426 ACTTTGAACTCAGTTTACCGACTG 59.191 41.667 0.00 0.00 46.58 3.51
3813 5490 6.013379 ACTTTCCAGAATCTGACCTGTTCATA 60.013 38.462 12.53 0.00 32.44 2.15
3849 5527 0.108019 TCGTGAGGCCTCGAGCTATA 59.892 55.000 27.43 5.35 43.05 1.31
3864 5542 2.980476 AGCTATATTCGCGTGTGAATCG 59.020 45.455 11.59 4.37 39.27 3.34
3883 5585 6.826231 TGAATCGATTGGTGGTTGTTGTATAT 59.174 34.615 16.96 0.00 0.00 0.86
3886 5588 6.847400 TCGATTGGTGGTTGTTGTATATTTG 58.153 36.000 0.00 0.00 0.00 2.32
3934 5636 7.379797 CGTGGTGATATTTCTCATGTACTACTG 59.620 40.741 0.00 0.00 0.00 2.74
3935 5637 8.198109 GTGGTGATATTTCTCATGTACTACTGT 58.802 37.037 0.00 0.00 0.00 3.55
3958 5660 3.526899 TGTATATACTGGTGGATGGGGG 58.473 50.000 13.89 0.00 0.00 5.40
3959 5661 2.835696 ATATACTGGTGGATGGGGGT 57.164 50.000 0.00 0.00 0.00 4.95
3960 5662 1.814429 TATACTGGTGGATGGGGGTG 58.186 55.000 0.00 0.00 0.00 4.61
3961 5663 0.045623 ATACTGGTGGATGGGGGTGA 59.954 55.000 0.00 0.00 0.00 4.02
4064 5766 6.867816 TCCGTTACGACAAGTGTTAATAACAT 59.132 34.615 9.22 0.00 44.35 2.71
4093 5795 1.466856 TTGTCATTCTGGATGCTGGC 58.533 50.000 0.00 0.00 35.64 4.85
4146 5901 2.560542 AGCTCATCGGTATCAGATGTCC 59.439 50.000 8.99 0.00 44.20 4.02
4172 5927 1.076044 AGTGGGTGCTGCAACCTTT 60.076 52.632 34.37 20.86 42.67 3.11
4181 5936 2.358898 TGCTGCAACCTTTCTCTGTTTC 59.641 45.455 0.00 0.00 0.00 2.78
4182 5937 2.358898 GCTGCAACCTTTCTCTGTTTCA 59.641 45.455 0.00 0.00 0.00 2.69
4183 5938 3.005155 GCTGCAACCTTTCTCTGTTTCAT 59.995 43.478 0.00 0.00 0.00 2.57
4184 5939 4.500375 GCTGCAACCTTTCTCTGTTTCATT 60.500 41.667 0.00 0.00 0.00 2.57
4194 5949 3.574396 TCTCTGTTTCATTCAGGTCGAGT 59.426 43.478 0.00 0.00 34.15 4.18
4197 5952 4.765339 TCTGTTTCATTCAGGTCGAGTAGA 59.235 41.667 0.00 0.00 34.15 2.59
4207 5962 2.026636 AGGTCGAGTAGAGTCAGCTTCT 60.027 50.000 0.00 0.00 0.00 2.85
4219 5974 4.006319 AGTCAGCTTCTTGTTAGCCATTC 58.994 43.478 0.00 0.00 39.47 2.67
4230 5985 4.643463 TGTTAGCCATTCGTCTGGTTTTA 58.357 39.130 7.64 0.00 38.63 1.52
4231 5986 5.250200 TGTTAGCCATTCGTCTGGTTTTAT 58.750 37.500 7.64 0.00 38.63 1.40
4232 5987 6.408035 TGTTAGCCATTCGTCTGGTTTTATA 58.592 36.000 7.64 0.00 38.63 0.98
4233 5988 7.051623 TGTTAGCCATTCGTCTGGTTTTATAT 58.948 34.615 7.64 0.00 38.63 0.86
4234 5989 7.225931 TGTTAGCCATTCGTCTGGTTTTATATC 59.774 37.037 7.64 0.00 38.63 1.63
4235 5990 4.750098 AGCCATTCGTCTGGTTTTATATCG 59.250 41.667 7.64 0.00 38.63 2.92
4236 5991 4.084013 GCCATTCGTCTGGTTTTATATCGG 60.084 45.833 7.64 0.00 38.63 4.18
4237 5992 4.084013 CCATTCGTCTGGTTTTATATCGGC 60.084 45.833 0.00 0.00 0.00 5.54
4238 5993 3.102052 TCGTCTGGTTTTATATCGGCC 57.898 47.619 0.00 0.00 0.00 6.13
4241 5996 3.247648 CGTCTGGTTTTATATCGGCCTTG 59.752 47.826 0.00 0.00 0.00 3.61
4242 5997 4.196971 GTCTGGTTTTATATCGGCCTTGT 58.803 43.478 0.00 0.00 0.00 3.16
4243 5998 4.638865 GTCTGGTTTTATATCGGCCTTGTT 59.361 41.667 0.00 0.00 0.00 2.83
4244 5999 5.124936 GTCTGGTTTTATATCGGCCTTGTTT 59.875 40.000 0.00 0.00 0.00 2.83
4245 6000 5.124776 TCTGGTTTTATATCGGCCTTGTTTG 59.875 40.000 0.00 0.00 0.00 2.93
4246 6001 4.158764 TGGTTTTATATCGGCCTTGTTTGG 59.841 41.667 0.00 0.00 0.00 3.28
4247 6002 4.399934 GGTTTTATATCGGCCTTGTTTGGA 59.600 41.667 0.00 0.00 0.00 3.53
4249 6004 6.206498 GTTTTATATCGGCCTTGTTTGGATC 58.794 40.000 0.00 0.00 0.00 3.36
4250 6005 3.576078 ATATCGGCCTTGTTTGGATCA 57.424 42.857 0.00 0.00 0.00 2.92
4251 6006 2.442236 ATCGGCCTTGTTTGGATCAT 57.558 45.000 0.00 0.00 0.00 2.45
4252 6007 1.462616 TCGGCCTTGTTTGGATCATG 58.537 50.000 0.00 0.00 0.00 3.07
4253 6008 0.457035 CGGCCTTGTTTGGATCATGG 59.543 55.000 0.00 0.00 34.55 3.66
4255 6010 0.826062 GCCTTGTTTGGATCATGGGG 59.174 55.000 0.00 0.00 32.84 4.96
4258 6013 3.707316 CCTTGTTTGGATCATGGGGTTA 58.293 45.455 0.00 0.00 0.00 2.85
4259 6014 3.701040 CCTTGTTTGGATCATGGGGTTAG 59.299 47.826 0.00 0.00 0.00 2.34
4260 6015 4.569653 CCTTGTTTGGATCATGGGGTTAGA 60.570 45.833 0.00 0.00 0.00 2.10
4261 6016 4.235079 TGTTTGGATCATGGGGTTAGAG 57.765 45.455 0.00 0.00 0.00 2.43
4262 6017 2.952310 GTTTGGATCATGGGGTTAGAGC 59.048 50.000 0.00 0.00 0.00 4.09
4263 6018 2.196742 TGGATCATGGGGTTAGAGCT 57.803 50.000 0.00 0.00 0.00 4.09
4264 6019 3.344535 TGGATCATGGGGTTAGAGCTA 57.655 47.619 0.00 0.00 0.00 3.32
4265 6020 3.242867 TGGATCATGGGGTTAGAGCTAG 58.757 50.000 0.00 0.00 0.00 3.42
4266 6021 3.243724 GGATCATGGGGTTAGAGCTAGT 58.756 50.000 0.00 0.00 0.00 2.57
4267 6022 3.648545 GGATCATGGGGTTAGAGCTAGTT 59.351 47.826 0.00 0.00 0.00 2.24
4268 6023 4.103311 GGATCATGGGGTTAGAGCTAGTTT 59.897 45.833 0.00 0.00 0.00 2.66
4269 6024 4.487714 TCATGGGGTTAGAGCTAGTTTG 57.512 45.455 0.00 0.00 0.00 2.93
4270 6025 3.199946 TCATGGGGTTAGAGCTAGTTTGG 59.800 47.826 0.00 0.00 0.00 3.28
4271 6026 1.913419 TGGGGTTAGAGCTAGTTTGGG 59.087 52.381 0.00 0.00 0.00 4.12
4272 6027 1.914108 GGGGTTAGAGCTAGTTTGGGT 59.086 52.381 0.00 0.00 0.00 4.51
4273 6028 2.307980 GGGGTTAGAGCTAGTTTGGGTT 59.692 50.000 0.00 0.00 0.00 4.11
4274 6029 3.520721 GGGGTTAGAGCTAGTTTGGGTTA 59.479 47.826 0.00 0.00 0.00 2.85
4275 6030 4.383880 GGGGTTAGAGCTAGTTTGGGTTAG 60.384 50.000 0.00 0.00 0.00 2.34
4276 6031 4.224594 GGGTTAGAGCTAGTTTGGGTTAGT 59.775 45.833 0.00 0.00 0.00 2.24
4277 6032 5.280368 GGGTTAGAGCTAGTTTGGGTTAGTT 60.280 44.000 0.00 0.00 0.00 2.24
4278 6033 5.642491 GGTTAGAGCTAGTTTGGGTTAGTTG 59.358 44.000 0.00 0.00 0.00 3.16
4279 6034 6.461640 GTTAGAGCTAGTTTGGGTTAGTTGA 58.538 40.000 0.00 0.00 0.00 3.18
4280 6035 5.153950 AGAGCTAGTTTGGGTTAGTTGAG 57.846 43.478 0.00 0.00 0.00 3.02
4281 6036 4.020128 AGAGCTAGTTTGGGTTAGTTGAGG 60.020 45.833 0.00 0.00 0.00 3.86
4282 6037 3.009143 AGCTAGTTTGGGTTAGTTGAGGG 59.991 47.826 0.00 0.00 0.00 4.30
4283 6038 2.287977 AGTTTGGGTTAGTTGAGGGC 57.712 50.000 0.00 0.00 0.00 5.19
4284 6039 1.780919 AGTTTGGGTTAGTTGAGGGCT 59.219 47.619 0.00 0.00 0.00 5.19
4285 6040 2.160205 GTTTGGGTTAGTTGAGGGCTC 58.840 52.381 0.00 0.00 0.00 4.70
4286 6041 1.440618 TTGGGTTAGTTGAGGGCTCA 58.559 50.000 0.00 0.00 37.91 4.26
4287 6042 1.440618 TGGGTTAGTTGAGGGCTCAA 58.559 50.000 0.00 0.00 46.27 3.02
4296 6051 3.534357 TTGAGGGCTCAAATAACCCAA 57.466 42.857 0.00 0.00 46.88 4.12
4297 6052 3.534357 TGAGGGCTCAAATAACCCAAA 57.466 42.857 0.00 0.00 46.88 3.28
4298 6053 3.850752 TGAGGGCTCAAATAACCCAAAA 58.149 40.909 0.00 0.00 46.88 2.44
4299 6054 3.831911 TGAGGGCTCAAATAACCCAAAAG 59.168 43.478 0.00 0.00 46.88 2.27
4300 6055 3.832490 GAGGGCTCAAATAACCCAAAAGT 59.168 43.478 0.00 0.00 46.88 2.66
4301 6056 5.005628 AGGGCTCAAATAACCCAAAAGTA 57.994 39.130 0.00 0.00 46.88 2.24
4302 6057 5.589831 AGGGCTCAAATAACCCAAAAGTAT 58.410 37.500 0.00 0.00 46.88 2.12
4303 6058 5.656859 AGGGCTCAAATAACCCAAAAGTATC 59.343 40.000 0.00 0.00 46.88 2.24
4304 6059 5.163447 GGGCTCAAATAACCCAAAAGTATCC 60.163 44.000 0.00 0.00 43.64 2.59
4305 6060 5.420739 GGCTCAAATAACCCAAAAGTATCCA 59.579 40.000 0.00 0.00 0.00 3.41
4306 6061 6.071051 GGCTCAAATAACCCAAAAGTATCCAA 60.071 38.462 0.00 0.00 0.00 3.53
4307 6062 7.382898 GCTCAAATAACCCAAAAGTATCCAAA 58.617 34.615 0.00 0.00 0.00 3.28
4308 6063 7.330946 GCTCAAATAACCCAAAAGTATCCAAAC 59.669 37.037 0.00 0.00 0.00 2.93
4309 6064 8.251383 TCAAATAACCCAAAAGTATCCAAACA 57.749 30.769 0.00 0.00 0.00 2.83
4310 6065 8.364142 TCAAATAACCCAAAAGTATCCAAACAG 58.636 33.333 0.00 0.00 0.00 3.16
4311 6066 6.850752 ATAACCCAAAAGTATCCAAACAGG 57.149 37.500 0.00 0.00 39.47 4.00
4312 6067 3.506398 ACCCAAAAGTATCCAAACAGGG 58.494 45.455 0.00 0.00 39.66 4.45
4313 6068 3.141272 ACCCAAAAGTATCCAAACAGGGA 59.859 43.478 0.00 0.00 42.21 4.20
4314 6069 3.763897 CCCAAAAGTATCCAAACAGGGAG 59.236 47.826 0.00 0.00 41.08 4.30
4315 6070 3.763897 CCAAAAGTATCCAAACAGGGAGG 59.236 47.826 0.00 0.00 41.08 4.30
4316 6071 3.739401 AAAGTATCCAAACAGGGAGGG 57.261 47.619 0.00 0.00 41.08 4.30
4317 6072 2.361085 AGTATCCAAACAGGGAGGGT 57.639 50.000 0.00 0.00 41.08 4.34
4318 6073 2.644151 AGTATCCAAACAGGGAGGGTT 58.356 47.619 0.00 0.00 41.08 4.11
4319 6074 3.810623 AGTATCCAAACAGGGAGGGTTA 58.189 45.455 0.00 0.00 41.08 2.85
4320 6075 3.780850 AGTATCCAAACAGGGAGGGTTAG 59.219 47.826 0.00 0.00 41.08 2.34
4321 6076 2.426431 TCCAAACAGGGAGGGTTAGA 57.574 50.000 0.00 0.00 38.24 2.10
4322 6077 2.708759 TCCAAACAGGGAGGGTTAGAA 58.291 47.619 0.00 0.00 38.24 2.10
4323 6078 3.265489 TCCAAACAGGGAGGGTTAGAAT 58.735 45.455 0.00 0.00 38.24 2.40
4324 6079 3.010138 TCCAAACAGGGAGGGTTAGAATG 59.990 47.826 0.00 0.00 38.24 2.67
4325 6080 3.356290 CAAACAGGGAGGGTTAGAATGG 58.644 50.000 0.00 0.00 0.00 3.16
4326 6081 1.596496 ACAGGGAGGGTTAGAATGGG 58.404 55.000 0.00 0.00 0.00 4.00
4327 6082 1.203570 ACAGGGAGGGTTAGAATGGGT 60.204 52.381 0.00 0.00 0.00 4.51
4328 6083 1.923148 CAGGGAGGGTTAGAATGGGTT 59.077 52.381 0.00 0.00 0.00 4.11
4329 6084 3.120108 CAGGGAGGGTTAGAATGGGTTA 58.880 50.000 0.00 0.00 0.00 2.85
4330 6085 3.136626 CAGGGAGGGTTAGAATGGGTTAG 59.863 52.174 0.00 0.00 0.00 2.34
4331 6086 3.120898 GGGAGGGTTAGAATGGGTTAGT 58.879 50.000 0.00 0.00 0.00 2.24
4332 6087 3.526430 GGGAGGGTTAGAATGGGTTAGTT 59.474 47.826 0.00 0.00 0.00 2.24
4333 6088 4.384978 GGGAGGGTTAGAATGGGTTAGTTC 60.385 50.000 0.00 0.00 0.00 3.01
4334 6089 4.384978 GGAGGGTTAGAATGGGTTAGTTCC 60.385 50.000 0.00 0.00 0.00 3.62
4335 6090 4.180723 AGGGTTAGAATGGGTTAGTTCCA 58.819 43.478 0.00 0.00 38.82 3.53
4336 6091 4.794067 AGGGTTAGAATGGGTTAGTTCCAT 59.206 41.667 0.00 0.00 46.11 3.41
4337 6092 5.104067 AGGGTTAGAATGGGTTAGTTCCATC 60.104 44.000 0.00 0.00 43.61 3.51
4338 6093 5.104067 GGGTTAGAATGGGTTAGTTCCATCT 60.104 44.000 0.00 0.00 43.61 2.90
4339 6094 6.100714 GGGTTAGAATGGGTTAGTTCCATCTA 59.899 42.308 0.00 0.00 43.61 1.98
4340 6095 7.366191 GGGTTAGAATGGGTTAGTTCCATCTAA 60.366 40.741 0.00 0.00 43.61 2.10
4341 6096 7.498239 GGTTAGAATGGGTTAGTTCCATCTAAC 59.502 40.741 21.08 21.08 43.61 2.34
4351 6106 5.632034 AGTTCCATCTAACCCAACTATCC 57.368 43.478 0.00 0.00 0.00 2.59
4352 6107 4.412528 AGTTCCATCTAACCCAACTATCCC 59.587 45.833 0.00 0.00 0.00 3.85
4353 6108 2.969950 TCCATCTAACCCAACTATCCCG 59.030 50.000 0.00 0.00 0.00 5.14
4354 6109 2.038557 CCATCTAACCCAACTATCCCGG 59.961 54.545 0.00 0.00 0.00 5.73
4355 6110 2.555732 TCTAACCCAACTATCCCGGT 57.444 50.000 0.00 0.00 0.00 5.28
4356 6111 2.112998 TCTAACCCAACTATCCCGGTG 58.887 52.381 0.00 0.00 0.00 4.94
4357 6112 1.140252 CTAACCCAACTATCCCGGTGG 59.860 57.143 0.00 0.00 0.00 4.61
4359 6114 0.981277 ACCCAACTATCCCGGTGGAG 60.981 60.000 8.06 0.31 46.08 3.86
4360 6115 0.689745 CCCAACTATCCCGGTGGAGA 60.690 60.000 8.06 0.00 46.08 3.71
4364 6119 2.431023 CTATCCCGGTGGAGAGGTG 58.569 63.158 0.00 0.00 44.71 4.00
4365 6120 1.749334 CTATCCCGGTGGAGAGGTGC 61.749 65.000 0.00 0.00 44.71 5.01
4366 6121 2.238319 TATCCCGGTGGAGAGGTGCT 62.238 60.000 0.00 0.00 46.08 4.40
4367 6122 3.322466 CCCGGTGGAGAGGTGCTT 61.322 66.667 0.00 0.00 0.00 3.91
4368 6123 1.987855 CCCGGTGGAGAGGTGCTTA 60.988 63.158 0.00 0.00 0.00 3.09
4369 6124 1.338136 CCCGGTGGAGAGGTGCTTAT 61.338 60.000 0.00 0.00 0.00 1.73
4370 6125 0.541863 CCGGTGGAGAGGTGCTTATT 59.458 55.000 0.00 0.00 0.00 1.40
4371 6126 1.065418 CCGGTGGAGAGGTGCTTATTT 60.065 52.381 0.00 0.00 0.00 1.40
4372 6127 2.009774 CGGTGGAGAGGTGCTTATTTG 58.990 52.381 0.00 0.00 0.00 2.32
4373 6128 2.369394 GGTGGAGAGGTGCTTATTTGG 58.631 52.381 0.00 0.00 0.00 3.28
4374 6129 2.369394 GTGGAGAGGTGCTTATTTGGG 58.631 52.381 0.00 0.00 0.00 4.12
4375 6130 1.992557 TGGAGAGGTGCTTATTTGGGT 59.007 47.619 0.00 0.00 0.00 4.51
4376 6131 2.378547 TGGAGAGGTGCTTATTTGGGTT 59.621 45.455 0.00 0.00 0.00 4.11
4377 6132 3.589735 TGGAGAGGTGCTTATTTGGGTTA 59.410 43.478 0.00 0.00 0.00 2.85
4378 6133 4.043561 TGGAGAGGTGCTTATTTGGGTTAA 59.956 41.667 0.00 0.00 0.00 2.01
4379 6134 5.014202 GGAGAGGTGCTTATTTGGGTTAAA 58.986 41.667 0.00 0.00 0.00 1.52
4380 6135 5.125578 GGAGAGGTGCTTATTTGGGTTAAAG 59.874 44.000 0.00 0.00 0.00 1.85
4381 6136 5.641155 AGAGGTGCTTATTTGGGTTAAAGT 58.359 37.500 0.00 0.00 0.00 2.66
4382 6137 5.476945 AGAGGTGCTTATTTGGGTTAAAGTG 59.523 40.000 0.00 0.00 0.00 3.16
4383 6138 4.526650 AGGTGCTTATTTGGGTTAAAGTGG 59.473 41.667 0.00 0.00 0.00 4.00
4384 6139 4.322424 GGTGCTTATTTGGGTTAAAGTGGG 60.322 45.833 0.00 0.00 0.00 4.61
4385 6140 4.282449 GTGCTTATTTGGGTTAAAGTGGGT 59.718 41.667 0.00 0.00 0.00 4.51
4386 6141 4.902448 TGCTTATTTGGGTTAAAGTGGGTT 59.098 37.500 0.00 0.00 0.00 4.11
4387 6142 6.015265 GTGCTTATTTGGGTTAAAGTGGGTTA 60.015 38.462 0.00 0.00 0.00 2.85
4388 6143 6.209788 TGCTTATTTGGGTTAAAGTGGGTTAG 59.790 38.462 0.00 0.00 0.00 2.34
4389 6144 6.434965 GCTTATTTGGGTTAAAGTGGGTTAGA 59.565 38.462 0.00 0.00 0.00 2.10
4390 6145 7.039574 GCTTATTTGGGTTAAAGTGGGTTAGAA 60.040 37.037 0.00 0.00 0.00 2.10
4391 6146 8.779096 TTATTTGGGTTAAAGTGGGTTAGAAA 57.221 30.769 0.00 0.00 0.00 2.52
4392 6147 7.678207 ATTTGGGTTAAAGTGGGTTAGAAAA 57.322 32.000 0.00 0.00 0.00 2.29
4393 6148 7.678207 TTTGGGTTAAAGTGGGTTAGAAAAT 57.322 32.000 0.00 0.00 0.00 1.82
4394 6149 8.779096 TTTGGGTTAAAGTGGGTTAGAAAATA 57.221 30.769 0.00 0.00 0.00 1.40
4395 6150 8.779096 TTGGGTTAAAGTGGGTTAGAAAATAA 57.221 30.769 0.00 0.00 0.00 1.40
4396 6151 8.180706 TGGGTTAAAGTGGGTTAGAAAATAAC 57.819 34.615 0.00 0.00 0.00 1.89
4397 6152 8.005976 TGGGTTAAAGTGGGTTAGAAAATAACT 58.994 33.333 0.00 0.00 0.00 2.24
4398 6153 8.517878 GGGTTAAAGTGGGTTAGAAAATAACTC 58.482 37.037 0.00 0.00 0.00 3.01
4399 6154 9.293404 GGTTAAAGTGGGTTAGAAAATAACTCT 57.707 33.333 0.00 0.00 0.00 3.24
4405 6160 9.722184 AGTGGGTTAGAAAATAACTCTTAACTC 57.278 33.333 0.00 0.00 0.00 3.01
4406 6161 9.722184 GTGGGTTAGAAAATAACTCTTAACTCT 57.278 33.333 0.00 0.00 0.00 3.24
4428 6183 8.690680 CTCTAACTGTGTTAGAGTATCCAAAC 57.309 38.462 26.67 0.00 41.73 2.93
4429 6184 8.185506 TCTAACTGTGTTAGAGTATCCAAACA 57.814 34.615 14.02 0.00 38.63 2.83
4430 6185 8.304596 TCTAACTGTGTTAGAGTATCCAAACAG 58.695 37.037 14.02 0.00 40.68 3.16
4431 6186 5.794894 ACTGTGTTAGAGTATCCAAACAGG 58.205 41.667 0.00 0.00 40.68 4.00
4432 6187 5.160607 TGTGTTAGAGTATCCAAACAGGG 57.839 43.478 0.00 0.00 40.68 4.45
4433 6188 3.939592 GTGTTAGAGTATCCAAACAGGGC 59.060 47.826 0.00 0.00 40.68 5.19
4434 6189 3.054655 TGTTAGAGTATCCAAACAGGGCC 60.055 47.826 0.00 0.00 36.81 5.80
4435 6190 1.668826 AGAGTATCCAAACAGGGCCA 58.331 50.000 6.18 0.00 38.24 5.36
4436 6191 2.208872 AGAGTATCCAAACAGGGCCAT 58.791 47.619 6.18 0.00 38.24 4.40
4437 6192 2.173569 AGAGTATCCAAACAGGGCCATC 59.826 50.000 6.18 0.00 38.24 3.51
4438 6193 1.134098 AGTATCCAAACAGGGCCATCG 60.134 52.381 6.18 0.00 38.24 3.84
4439 6194 0.916086 TATCCAAACAGGGCCATCGT 59.084 50.000 6.18 0.00 38.24 3.73
4440 6195 0.039618 ATCCAAACAGGGCCATCGTT 59.960 50.000 6.18 2.85 38.24 3.85
4441 6196 0.178975 TCCAAACAGGGCCATCGTTT 60.179 50.000 6.18 9.63 38.24 3.60
4442 6197 1.074084 TCCAAACAGGGCCATCGTTTA 59.926 47.619 15.53 2.64 38.24 2.01
4443 6198 1.201414 CCAAACAGGGCCATCGTTTAC 59.799 52.381 15.53 0.00 31.85 2.01
4444 6199 1.135803 CAAACAGGGCCATCGTTTACG 60.136 52.381 15.53 0.00 41.45 3.18
4445 6200 0.035739 AACAGGGCCATCGTTTACGT 59.964 50.000 6.18 0.00 40.80 3.57
4446 6201 0.035739 ACAGGGCCATCGTTTACGTT 59.964 50.000 6.18 0.00 40.80 3.99
4447 6202 1.161843 CAGGGCCATCGTTTACGTTT 58.838 50.000 6.18 0.00 40.80 3.60
4448 6203 1.135803 CAGGGCCATCGTTTACGTTTG 60.136 52.381 6.18 2.27 40.80 2.93
4449 6204 0.169451 GGGCCATCGTTTACGTTTGG 59.831 55.000 4.39 16.87 42.32 3.28
4450 6205 1.158434 GGCCATCGTTTACGTTTGGA 58.842 50.000 22.01 0.00 42.15 3.53
4451 6206 1.135888 GGCCATCGTTTACGTTTGGAC 60.136 52.381 22.01 18.20 42.15 4.02
4452 6207 1.135888 GCCATCGTTTACGTTTGGACC 60.136 52.381 22.01 8.80 42.15 4.46
4453 6208 1.127213 CCATCGTTTACGTTTGGACCG 59.873 52.381 16.46 0.00 42.15 4.79
4454 6209 1.794116 CATCGTTTACGTTTGGACCGT 59.206 47.619 0.00 0.00 42.06 4.83
4455 6210 1.933247 TCGTTTACGTTTGGACCGTT 58.067 45.000 0.00 0.00 39.60 4.44
4456 6211 1.857837 TCGTTTACGTTTGGACCGTTC 59.142 47.619 0.00 0.00 39.60 3.95
4464 6221 3.119424 ACGTTTGGACCGTTCACATTTTT 60.119 39.130 0.00 0.00 34.28 1.94
4468 6225 6.856938 CGTTTGGACCGTTCACATTTTTAATA 59.143 34.615 0.00 0.00 0.00 0.98
4502 6259 6.884280 AGTTTGGAGATGTTTGACTTAAGG 57.116 37.500 7.53 0.00 0.00 2.69
4504 6261 3.686016 TGGAGATGTTTGACTTAAGGCC 58.314 45.455 5.69 0.00 0.00 5.19
4507 6264 4.156739 GGAGATGTTTGACTTAAGGCCAAG 59.843 45.833 5.01 2.81 0.00 3.61
4508 6265 3.507622 AGATGTTTGACTTAAGGCCAAGC 59.492 43.478 5.01 11.81 0.00 4.01
4509 6266 2.660572 TGTTTGACTTAAGGCCAAGCA 58.339 42.857 18.33 18.33 0.00 3.91
4510 6267 3.230134 TGTTTGACTTAAGGCCAAGCAT 58.770 40.909 18.33 0.00 0.00 3.79
4511 6268 4.402829 TGTTTGACTTAAGGCCAAGCATA 58.597 39.130 18.33 0.00 0.00 3.14
4514 6271 6.183360 TGTTTGACTTAAGGCCAAGCATAAAA 60.183 34.615 18.33 4.39 0.00 1.52
4515 6272 6.412362 TTGACTTAAGGCCAAGCATAAAAA 57.588 33.333 5.01 0.00 0.00 1.94
4517 6274 5.538433 TGACTTAAGGCCAAGCATAAAAACT 59.462 36.000 5.01 0.00 0.00 2.66
4518 6275 6.041523 TGACTTAAGGCCAAGCATAAAAACTT 59.958 34.615 5.01 0.00 0.00 2.66
4519 6276 6.455647 ACTTAAGGCCAAGCATAAAAACTTC 58.544 36.000 5.01 0.00 0.00 3.01
4521 6278 4.953940 AGGCCAAGCATAAAAACTTCAA 57.046 36.364 5.01 0.00 0.00 2.69
4525 6289 4.692155 GCCAAGCATAAAAACTTCAAGCAT 59.308 37.500 0.00 0.00 0.00 3.79
4534 6298 5.453567 AAAACTTCAAGCATGGAGTAACC 57.546 39.130 2.70 0.00 45.03 2.85
4555 6319 7.792374 AACCATCAGTACTAAAGTATGCATG 57.208 36.000 10.16 0.00 32.54 4.06
4573 6337 3.191162 GCATGTTGGAACTATGAGCACAA 59.809 43.478 0.00 0.00 0.00 3.33
4584 6348 8.893727 GGAACTATGAGCACAAAATATTACAGT 58.106 33.333 0.00 0.00 0.00 3.55
4687 6461 2.617308 TCTACATGACGGCAGTACTAGC 59.383 50.000 0.00 1.67 0.00 3.42
4720 6494 9.088987 TCATTCTAATGTGGTATGACTATGCTA 57.911 33.333 2.80 0.00 37.65 3.49
4721 6495 9.144747 CATTCTAATGTGGTATGACTATGCTAC 57.855 37.037 0.00 0.00 32.39 3.58
4722 6496 7.833285 TCTAATGTGGTATGACTATGCTACA 57.167 36.000 0.00 0.00 42.57 2.74
4726 6500 5.056480 TGTGGTATGACTATGCTACATTGC 58.944 41.667 0.00 0.00 35.95 3.56
4727 6501 5.163311 TGTGGTATGACTATGCTACATTGCT 60.163 40.000 0.00 0.00 35.95 3.91
4728 6502 6.041523 TGTGGTATGACTATGCTACATTGCTA 59.958 38.462 0.00 0.00 35.95 3.49
4729 6503 6.366332 GTGGTATGACTATGCTACATTGCTAC 59.634 42.308 0.00 0.00 32.13 3.58
4730 6504 5.573282 GGTATGACTATGCTACATTGCTACG 59.427 44.000 0.00 0.00 0.00 3.51
4731 6505 4.911514 TGACTATGCTACATTGCTACGA 57.088 40.909 0.00 0.00 0.00 3.43
4732 6506 4.860072 TGACTATGCTACATTGCTACGAG 58.140 43.478 0.00 0.00 0.00 4.18
4733 6507 4.230657 GACTATGCTACATTGCTACGAGG 58.769 47.826 0.00 0.00 0.00 4.63
4734 6508 2.533266 ATGCTACATTGCTACGAGGG 57.467 50.000 0.00 0.00 0.00 4.30
4735 6509 1.480789 TGCTACATTGCTACGAGGGA 58.519 50.000 0.00 0.00 0.00 4.20
4736 6510 1.828595 TGCTACATTGCTACGAGGGAA 59.171 47.619 0.00 0.00 0.00 3.97
4737 6511 2.159099 TGCTACATTGCTACGAGGGAAG 60.159 50.000 0.00 0.00 0.00 3.46
4738 6512 2.803492 GCTACATTGCTACGAGGGAAGG 60.803 54.545 0.00 0.00 0.00 3.46
4739 6513 0.541863 ACATTGCTACGAGGGAAGGG 59.458 55.000 0.00 0.00 0.00 3.95
4740 6514 0.830648 CATTGCTACGAGGGAAGGGA 59.169 55.000 0.00 0.00 0.00 4.20
4741 6515 1.123928 ATTGCTACGAGGGAAGGGAG 58.876 55.000 0.00 0.00 0.00 4.30
4742 6516 0.976073 TTGCTACGAGGGAAGGGAGG 60.976 60.000 0.00 0.00 0.00 4.30
4743 6517 1.076192 GCTACGAGGGAAGGGAGGA 60.076 63.158 0.00 0.00 0.00 3.71
4744 6518 1.110518 GCTACGAGGGAAGGGAGGAG 61.111 65.000 0.00 0.00 0.00 3.69
4745 6519 0.551879 CTACGAGGGAAGGGAGGAGA 59.448 60.000 0.00 0.00 0.00 3.71
4746 6520 0.258194 TACGAGGGAAGGGAGGAGAC 59.742 60.000 0.00 0.00 0.00 3.36
4747 6521 2.122167 CGAGGGAAGGGAGGAGACG 61.122 68.421 0.00 0.00 0.00 4.18
4748 6522 1.306970 GAGGGAAGGGAGGAGACGA 59.693 63.158 0.00 0.00 0.00 4.20
4749 6523 0.753848 GAGGGAAGGGAGGAGACGAG 60.754 65.000 0.00 0.00 0.00 4.18
4750 6524 1.758906 GGGAAGGGAGGAGACGAGG 60.759 68.421 0.00 0.00 0.00 4.63
4751 6525 2.428085 GGAAGGGAGGAGACGAGGC 61.428 68.421 0.00 0.00 0.00 4.70
4752 6526 1.682684 GAAGGGAGGAGACGAGGCA 60.683 63.158 0.00 0.00 0.00 4.75
4753 6527 1.002274 AAGGGAGGAGACGAGGCAT 59.998 57.895 0.00 0.00 0.00 4.40
4754 6528 1.333636 AAGGGAGGAGACGAGGCATG 61.334 60.000 0.00 0.00 0.00 4.06
4755 6529 2.107953 GGAGGAGACGAGGCATGC 59.892 66.667 9.90 9.90 0.00 4.06
4756 6530 2.725312 GGAGGAGACGAGGCATGCA 61.725 63.158 21.36 0.00 0.00 3.96
4757 6531 1.227205 GAGGAGACGAGGCATGCAG 60.227 63.158 21.36 12.58 0.00 4.41
4758 6532 1.670949 GAGGAGACGAGGCATGCAGA 61.671 60.000 21.36 0.00 0.00 4.26
4759 6533 1.520342 GGAGACGAGGCATGCAGAC 60.520 63.158 21.36 10.39 0.00 3.51
4760 6534 1.875813 GAGACGAGGCATGCAGACG 60.876 63.158 21.36 21.71 0.00 4.18
4761 6535 2.181777 GACGAGGCATGCAGACGA 59.818 61.111 27.33 0.00 0.00 4.20
4762 6536 1.446099 GACGAGGCATGCAGACGAA 60.446 57.895 27.33 0.00 0.00 3.85
4763 6537 1.687494 GACGAGGCATGCAGACGAAC 61.687 60.000 27.33 19.06 0.00 3.95
4764 6538 1.446792 CGAGGCATGCAGACGAACT 60.447 57.895 21.36 4.91 0.00 3.01
4765 6539 0.179137 CGAGGCATGCAGACGAACTA 60.179 55.000 21.36 0.00 0.00 2.24
4766 6540 1.536922 CGAGGCATGCAGACGAACTAT 60.537 52.381 21.36 0.00 0.00 2.12
4767 6541 2.555199 GAGGCATGCAGACGAACTATT 58.445 47.619 21.36 0.00 0.00 1.73
4768 6542 2.939103 GAGGCATGCAGACGAACTATTT 59.061 45.455 21.36 0.00 0.00 1.40
4769 6543 2.679837 AGGCATGCAGACGAACTATTTG 59.320 45.455 21.36 0.00 0.00 2.32
4770 6544 2.223340 GGCATGCAGACGAACTATTTGG 60.223 50.000 21.36 0.00 0.00 3.28
4771 6545 2.420022 GCATGCAGACGAACTATTTGGT 59.580 45.455 14.21 0.00 0.00 3.67
4772 6546 3.485877 GCATGCAGACGAACTATTTGGTC 60.486 47.826 14.21 0.47 39.96 4.02
4774 6548 3.585862 TGCAGACGAACTATTTGGTCTC 58.414 45.455 7.39 4.72 44.91 3.36
4775 6549 3.006430 TGCAGACGAACTATTTGGTCTCA 59.994 43.478 7.39 6.72 44.91 3.27
4776 6550 3.368236 GCAGACGAACTATTTGGTCTCAC 59.632 47.826 7.39 1.08 44.91 3.51
4777 6551 4.810790 CAGACGAACTATTTGGTCTCACT 58.189 43.478 7.39 0.00 44.91 3.41
4778 6552 4.623167 CAGACGAACTATTTGGTCTCACTG 59.377 45.833 7.39 0.00 44.91 3.66
4779 6553 3.926616 ACGAACTATTTGGTCTCACTGG 58.073 45.455 0.00 0.00 0.00 4.00
4780 6554 2.673368 CGAACTATTTGGTCTCACTGGC 59.327 50.000 0.00 0.00 0.00 4.85
4781 6555 2.789409 ACTATTTGGTCTCACTGGCC 57.211 50.000 0.00 0.00 41.87 5.36
4782 6556 2.269940 ACTATTTGGTCTCACTGGCCT 58.730 47.619 3.32 0.00 42.07 5.19
4783 6557 2.644798 ACTATTTGGTCTCACTGGCCTT 59.355 45.455 3.32 0.00 42.07 4.35
4784 6558 1.915141 ATTTGGTCTCACTGGCCTTG 58.085 50.000 3.32 0.57 42.07 3.61
4785 6559 0.178992 TTTGGTCTCACTGGCCTTGG 60.179 55.000 3.32 0.00 42.07 3.61
4786 6560 1.059584 TTGGTCTCACTGGCCTTGGA 61.060 55.000 3.32 0.00 42.07 3.53
4787 6561 0.842030 TGGTCTCACTGGCCTTGGAT 60.842 55.000 3.32 0.00 42.07 3.41
4788 6562 0.393537 GGTCTCACTGGCCTTGGATG 60.394 60.000 3.32 0.00 37.49 3.51
4789 6563 1.028868 GTCTCACTGGCCTTGGATGC 61.029 60.000 3.32 0.00 0.00 3.91
4790 6564 1.203441 TCTCACTGGCCTTGGATGCT 61.203 55.000 3.32 0.00 0.00 3.79
4791 6565 1.001764 TCACTGGCCTTGGATGCTG 60.002 57.895 3.32 0.00 0.00 4.41
4792 6566 2.050350 CACTGGCCTTGGATGCTGG 61.050 63.158 3.32 0.00 0.00 4.85
4793 6567 2.357836 CTGGCCTTGGATGCTGGT 59.642 61.111 3.32 0.00 0.00 4.00
4794 6568 2.036098 TGGCCTTGGATGCTGGTG 59.964 61.111 3.32 0.00 0.00 4.17
4795 6569 3.455469 GGCCTTGGATGCTGGTGC 61.455 66.667 0.00 0.00 40.20 5.01
4796 6570 2.362120 GCCTTGGATGCTGGTGCT 60.362 61.111 0.00 0.00 40.48 4.40
4797 6571 2.707849 GCCTTGGATGCTGGTGCTG 61.708 63.158 0.00 0.00 40.48 4.41
4798 6572 2.707849 CCTTGGATGCTGGTGCTGC 61.708 63.158 0.00 0.00 40.48 5.25
4799 6573 1.677966 CTTGGATGCTGGTGCTGCT 60.678 57.895 0.00 0.00 40.48 4.24
4800 6574 1.934220 CTTGGATGCTGGTGCTGCTG 61.934 60.000 0.00 0.00 40.48 4.41
4801 6575 3.138798 GGATGCTGGTGCTGCTGG 61.139 66.667 0.00 0.00 40.48 4.85
4802 6576 3.823330 GATGCTGGTGCTGCTGGC 61.823 66.667 0.00 0.69 40.48 4.85
4832 6606 4.504916 CTGTCGAGGCAGCTCCGG 62.505 72.222 0.00 0.00 40.77 5.14
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 5.340863 CCATAATTTTCCCCCTTACTCTGGT 60.341 44.000 0.00 0.00 0.00 4.00
40 41 1.221840 GATGTGCGTCCACTCCCAT 59.778 57.895 0.00 0.00 42.54 4.00
346 348 9.920133 TTATGCACATTAAGCAACATTCTTAAA 57.080 25.926 0.00 0.00 46.27 1.52
716 718 3.517901 TGTCCATCTCAAAATCTACCGGT 59.482 43.478 13.98 13.98 0.00 5.28
734 736 2.617274 GGCTGCCACGACTTTGTCC 61.617 63.158 15.17 0.00 0.00 4.02
767 770 3.846588 AGTACTTCCATGAAGGGTGACAT 59.153 43.478 8.56 0.00 43.25 3.06
905 920 2.080693 CGGTTCATCGGTTGATTGGAA 58.919 47.619 0.00 0.00 33.34 3.53
920 935 1.734465 CTGAGCAATGGAAGTCGGTTC 59.266 52.381 0.00 0.00 0.00 3.62
951 966 3.373565 GGGTGGGCCTTTCGCTTG 61.374 66.667 4.53 0.00 37.74 4.01
975 990 1.961277 GGTTGGTGGTGAGCTGTCG 60.961 63.158 0.00 0.00 0.00 4.35
1102 1127 0.392729 AGGACGTAGGAGTCGTGGAG 60.393 60.000 0.00 0.00 41.64 3.86
1103 1128 0.392193 GAGGACGTAGGAGTCGTGGA 60.392 60.000 0.00 0.00 41.64 4.02
1104 1129 1.375098 GGAGGACGTAGGAGTCGTGG 61.375 65.000 0.00 0.00 41.64 4.94
1105 1130 0.392729 AGGAGGACGTAGGAGTCGTG 60.393 60.000 0.00 0.00 41.64 4.35
1364 1389 4.554363 CGTCGAGGCGGCTGTAGG 62.554 72.222 19.63 5.80 0.00 3.18
1386 1411 0.032952 GCTTGCCACGATACCCGATA 59.967 55.000 0.00 0.00 41.76 2.92
1583 1608 1.355005 GACGCTGAGGAAGAAGAAGC 58.645 55.000 0.00 0.00 0.00 3.86
1639 1664 3.003689 CCATCCAGACATAAACAATCGGC 59.996 47.826 0.00 0.00 0.00 5.54
1640 1665 4.450976 TCCATCCAGACATAAACAATCGG 58.549 43.478 0.00 0.00 0.00 4.18
1641 1666 5.008019 CCTTCCATCCAGACATAAACAATCG 59.992 44.000 0.00 0.00 0.00 3.34
1642 1667 5.221126 GCCTTCCATCCAGACATAAACAATC 60.221 44.000 0.00 0.00 0.00 2.67
1705 1731 1.373748 CACATTGCAGCAAGGGCAC 60.374 57.895 23.03 0.00 44.61 5.01
1707 1733 2.433664 GCACATTGCAGCAAGGGC 60.434 61.111 23.03 18.38 44.26 5.19
1708 1734 2.126228 CGCACATTGCAGCAAGGG 60.126 61.111 23.03 15.11 45.36 3.95
1714 1740 1.987770 GAATTGGAACGCACATTGCAG 59.012 47.619 0.00 0.00 45.36 4.41
1730 1756 3.602483 GGCTTGCAATCCAATGTGAATT 58.398 40.909 14.43 0.00 31.91 2.17
1731 1757 2.093341 GGGCTTGCAATCCAATGTGAAT 60.093 45.455 20.36 0.00 31.91 2.57
1746 1772 3.142838 CGATTGGGGCAGGGCTTG 61.143 66.667 0.00 0.00 0.00 4.01
1756 1782 2.100916 ACGTCAGATCCTAACGATTGGG 59.899 50.000 16.22 0.00 39.59 4.12
1783 1813 3.374042 TTCTGTTTGTTTGGGAGGTCA 57.626 42.857 0.00 0.00 0.00 4.02
2068 2121 9.498176 GTTTACCTATTGTATTATACACCCCTG 57.502 37.037 4.35 0.00 38.63 4.45
2144 2197 6.156256 ACCTGGCACATAATAGTCTTGAAGTA 59.844 38.462 0.00 0.00 38.20 2.24
2393 3059 5.428184 ACAGAAGAGAATAACAGGAAGGG 57.572 43.478 0.00 0.00 0.00 3.95
2716 3392 5.694458 CCTTTGTAGTGTTTAAAATGGCCAC 59.306 40.000 8.16 0.00 0.00 5.01
2734 3410 3.821033 GAGGTTTCACTGCATACCTTTGT 59.179 43.478 0.00 0.00 40.97 2.83
2768 3445 1.915141 AGAATTGTGGGTCCAGCTTG 58.085 50.000 0.00 0.00 0.00 4.01
2769 3446 3.690460 CTTAGAATTGTGGGTCCAGCTT 58.310 45.455 0.00 0.00 0.00 3.74
2776 3453 2.025887 CCTCAGGCTTAGAATTGTGGGT 60.026 50.000 0.00 0.00 0.00 4.51
2777 3454 2.648059 CCTCAGGCTTAGAATTGTGGG 58.352 52.381 0.00 0.00 0.00 4.61
2800 3477 5.624344 ATTGTTTCAGAGATGACTGCAAG 57.376 39.130 0.00 0.00 42.29 4.01
2899 4194 5.825679 ACTGTCCTACTTTGCAACAACATAA 59.174 36.000 0.00 0.00 0.00 1.90
2932 4306 3.980646 ACACTCTCAGTCTATCATCGC 57.019 47.619 0.00 0.00 0.00 4.58
2933 4307 6.364945 TGTAACACTCTCAGTCTATCATCG 57.635 41.667 0.00 0.00 0.00 3.84
2935 4309 8.976353 AGAAATGTAACACTCTCAGTCTATCAT 58.024 33.333 0.00 0.00 0.00 2.45
2959 4359 1.425066 ACCCAGAAACATCTTGGCAGA 59.575 47.619 0.00 0.00 0.00 4.26
3008 4411 6.105333 GCAATGAAATTACTTGGTGGCATTA 58.895 36.000 0.00 0.00 32.46 1.90
3139 4543 0.850784 ACCAAAGTACCCAGCTTGGT 59.149 50.000 14.83 14.83 42.62 3.67
3151 4555 2.413310 ACGAAACCAGACACCAAAGT 57.587 45.000 0.00 0.00 0.00 2.66
3178 4582 1.340248 AGGAACACACCTACGTCTGTG 59.660 52.381 15.71 15.71 42.98 3.66
3180 4584 1.336887 CCAGGAACACACCTACGTCTG 60.337 57.143 0.00 0.00 38.32 3.51
3185 4589 1.542547 CCACACCAGGAACACACCTAC 60.543 57.143 0.00 0.00 38.32 3.18
3188 4592 1.101049 CACCACACCAGGAACACACC 61.101 60.000 0.00 0.00 0.00 4.16
3195 4599 0.118346 ATAGGGACACCACACCAGGA 59.882 55.000 0.00 0.00 40.13 3.86
3196 4600 0.991920 AATAGGGACACCACACCAGG 59.008 55.000 0.00 0.00 40.13 4.45
3229 4634 3.071167 AGGGATAACGGAGCATAAGTTCC 59.929 47.826 0.00 0.00 41.35 3.62
3274 4691 3.052036 CCTGAAATGCCACAAAGAAACG 58.948 45.455 0.00 0.00 0.00 3.60
3279 4702 2.529780 TTGCCTGAAATGCCACAAAG 57.470 45.000 0.00 0.00 0.00 2.77
3283 4706 2.818130 TCTTTTGCCTGAAATGCCAC 57.182 45.000 0.00 0.00 0.00 5.01
3284 4707 3.134442 AGTTTCTTTTGCCTGAAATGCCA 59.866 39.130 0.00 0.00 35.13 4.92
3299 4722 6.012658 TGCGAAATCAGCAATTAGTTTCTT 57.987 33.333 0.00 0.00 42.18 2.52
3311 4734 3.868077 AGATACTTCACTGCGAAATCAGC 59.132 43.478 0.00 0.00 37.59 4.26
3320 4762 7.010552 CAGGTAACACATAAGATACTTCACTGC 59.989 40.741 0.00 0.00 41.41 4.40
3449 4891 3.638160 ACCACAACTCTTGTTTGATGCAT 59.362 39.130 0.00 0.00 43.23 3.96
3472 4914 0.474854 TAACAGACAGGGCCCCAAGA 60.475 55.000 21.43 0.00 0.00 3.02
3474 4916 0.623723 GATAACAGACAGGGCCCCAA 59.376 55.000 21.43 0.00 0.00 4.12
3552 5067 6.187727 ACTTTTGGTCTTTCTGGTATCTGA 57.812 37.500 0.00 0.00 0.00 3.27
3682 5359 5.446143 GTGGATTAACATGAACCACACAA 57.554 39.130 18.34 0.00 46.75 3.33
3770 5447 0.782384 GTTTGCGATCGACGTTCAGT 59.218 50.000 21.57 0.00 44.60 3.41
3773 5450 2.483207 GAAAGTTTGCGATCGACGTTC 58.517 47.619 21.57 17.25 44.60 3.95
3776 5453 0.787787 TGGAAAGTTTGCGATCGACG 59.212 50.000 21.57 0.00 45.66 5.12
3778 5455 2.448926 TCTGGAAAGTTTGCGATCGA 57.551 45.000 21.57 0.59 0.00 3.59
3783 5460 3.365364 GGTCAGATTCTGGAAAGTTTGCG 60.365 47.826 13.59 0.00 31.51 4.85
3813 5490 6.102663 CCTCACGAACTCACTGATAGAAAAT 58.897 40.000 0.00 0.00 0.00 1.82
3821 5498 0.827925 AGGCCTCACGAACTCACTGA 60.828 55.000 0.00 0.00 0.00 3.41
3831 5508 1.169577 ATATAGCTCGAGGCCTCACG 58.830 55.000 31.67 21.68 43.05 4.35
3849 5527 1.327460 CCAATCGATTCACACGCGAAT 59.673 47.619 15.93 0.50 38.32 3.34
3864 5542 7.643764 CGATCAAATATACAACAACCACCAATC 59.356 37.037 0.00 0.00 0.00 2.67
3883 5585 2.026356 ACATCCATCACCACCGATCAAA 60.026 45.455 0.00 0.00 0.00 2.69
3886 5588 1.586422 CACATCCATCACCACCGATC 58.414 55.000 0.00 0.00 0.00 3.69
3934 5636 5.130477 CCCCCATCCACCAGTATATACATAC 59.870 48.000 15.18 0.00 37.83 2.39
3935 5637 5.222887 ACCCCCATCCACCAGTATATACATA 60.223 44.000 15.18 0.00 0.00 2.29
3938 5640 3.263425 CACCCCCATCCACCAGTATATAC 59.737 52.174 4.60 4.60 0.00 1.47
3950 5652 4.546674 AGAATTTACAATCACCCCCATCC 58.453 43.478 0.00 0.00 0.00 3.51
3958 5660 5.063817 GGCATGCCAAAGAATTTACAATCAC 59.936 40.000 32.08 0.00 35.03 3.06
3959 5661 5.177326 GGCATGCCAAAGAATTTACAATCA 58.823 37.500 32.08 0.00 35.03 2.57
3960 5662 4.571984 GGGCATGCCAAAGAATTTACAATC 59.428 41.667 36.56 10.74 35.03 2.67
3961 5663 4.019501 TGGGCATGCCAAAGAATTTACAAT 60.020 37.500 36.56 0.00 35.03 2.71
4064 5766 6.867816 GCATCCAGAATGACAATGTAAAACAA 59.132 34.615 0.00 0.00 39.69 2.83
4093 5795 3.552478 CGATGTCAGATGATCCCAGACAG 60.552 52.174 15.02 3.50 41.85 3.51
4172 5927 3.574396 ACTCGACCTGAATGAAACAGAGA 59.426 43.478 0.00 0.00 37.54 3.10
4181 5936 3.488384 GCTGACTCTACTCGACCTGAATG 60.488 52.174 0.00 0.00 0.00 2.67
4182 5937 2.685897 GCTGACTCTACTCGACCTGAAT 59.314 50.000 0.00 0.00 0.00 2.57
4183 5938 2.085320 GCTGACTCTACTCGACCTGAA 58.915 52.381 0.00 0.00 0.00 3.02
4184 5939 1.279558 AGCTGACTCTACTCGACCTGA 59.720 52.381 0.00 0.00 0.00 3.86
4194 5949 3.832490 TGGCTAACAAGAAGCTGACTCTA 59.168 43.478 0.00 0.00 39.97 2.43
4197 5952 3.710209 ATGGCTAACAAGAAGCTGACT 57.290 42.857 0.00 0.00 39.97 3.41
4207 5962 2.851263 ACCAGACGAATGGCTAACAA 57.149 45.000 10.03 0.00 44.80 2.83
4219 5974 3.107642 AGGCCGATATAAAACCAGACG 57.892 47.619 0.00 0.00 0.00 4.18
4230 5985 3.576078 TGATCCAAACAAGGCCGATAT 57.424 42.857 0.00 0.00 0.00 1.63
4231 5986 3.213506 CATGATCCAAACAAGGCCGATA 58.786 45.455 0.00 0.00 0.00 2.92
4232 5987 2.026641 CATGATCCAAACAAGGCCGAT 58.973 47.619 0.00 0.00 0.00 4.18
4233 5988 1.462616 CATGATCCAAACAAGGCCGA 58.537 50.000 0.00 0.00 0.00 5.54
4234 5989 0.457035 CCATGATCCAAACAAGGCCG 59.543 55.000 0.00 0.00 0.00 6.13
4235 5990 0.826062 CCCATGATCCAAACAAGGCC 59.174 55.000 0.00 0.00 0.00 5.19
4236 5991 0.826062 CCCCATGATCCAAACAAGGC 59.174 55.000 0.00 0.00 0.00 4.35
4237 5992 2.236489 ACCCCATGATCCAAACAAGG 57.764 50.000 0.00 0.00 0.00 3.61
4238 5993 4.599041 TCTAACCCCATGATCCAAACAAG 58.401 43.478 0.00 0.00 0.00 3.16
4241 5996 2.952310 GCTCTAACCCCATGATCCAAAC 59.048 50.000 0.00 0.00 0.00 2.93
4242 5997 2.852449 AGCTCTAACCCCATGATCCAAA 59.148 45.455 0.00 0.00 0.00 3.28
4243 5998 2.492025 AGCTCTAACCCCATGATCCAA 58.508 47.619 0.00 0.00 0.00 3.53
4244 5999 2.196742 AGCTCTAACCCCATGATCCA 57.803 50.000 0.00 0.00 0.00 3.41
4245 6000 3.243724 ACTAGCTCTAACCCCATGATCC 58.756 50.000 0.00 0.00 0.00 3.36
4246 6001 4.965200 AACTAGCTCTAACCCCATGATC 57.035 45.455 0.00 0.00 0.00 2.92
4247 6002 4.141390 CCAAACTAGCTCTAACCCCATGAT 60.141 45.833 0.00 0.00 0.00 2.45
4249 6004 3.545703 CCAAACTAGCTCTAACCCCATG 58.454 50.000 0.00 0.00 0.00 3.66
4250 6005 2.509964 CCCAAACTAGCTCTAACCCCAT 59.490 50.000 0.00 0.00 0.00 4.00
4251 6006 1.913419 CCCAAACTAGCTCTAACCCCA 59.087 52.381 0.00 0.00 0.00 4.96
4252 6007 1.914108 ACCCAAACTAGCTCTAACCCC 59.086 52.381 0.00 0.00 0.00 4.95
4253 6008 3.715638 AACCCAAACTAGCTCTAACCC 57.284 47.619 0.00 0.00 0.00 4.11
4255 6010 6.461640 TCAACTAACCCAAACTAGCTCTAAC 58.538 40.000 0.00 0.00 0.00 2.34
4258 6013 4.020128 CCTCAACTAACCCAAACTAGCTCT 60.020 45.833 0.00 0.00 0.00 4.09
4259 6014 4.254492 CCTCAACTAACCCAAACTAGCTC 58.746 47.826 0.00 0.00 0.00 4.09
4260 6015 3.009143 CCCTCAACTAACCCAAACTAGCT 59.991 47.826 0.00 0.00 0.00 3.32
4261 6016 3.344515 CCCTCAACTAACCCAAACTAGC 58.655 50.000 0.00 0.00 0.00 3.42
4262 6017 3.009143 AGCCCTCAACTAACCCAAACTAG 59.991 47.826 0.00 0.00 0.00 2.57
4263 6018 2.983898 AGCCCTCAACTAACCCAAACTA 59.016 45.455 0.00 0.00 0.00 2.24
4264 6019 1.780919 AGCCCTCAACTAACCCAAACT 59.219 47.619 0.00 0.00 0.00 2.66
4265 6020 2.160205 GAGCCCTCAACTAACCCAAAC 58.840 52.381 0.00 0.00 0.00 2.93
4266 6021 1.777878 TGAGCCCTCAACTAACCCAAA 59.222 47.619 0.00 0.00 36.53 3.28
4267 6022 1.440618 TGAGCCCTCAACTAACCCAA 58.559 50.000 0.00 0.00 36.53 4.12
4268 6023 1.440618 TTGAGCCCTCAACTAACCCA 58.559 50.000 6.62 0.00 43.90 4.51
4276 6031 3.534357 TTGGGTTATTTGAGCCCTCAA 57.466 42.857 6.62 6.62 46.72 3.02
4277 6032 3.534357 TTTGGGTTATTTGAGCCCTCA 57.466 42.857 0.00 0.00 42.77 3.86
4278 6033 3.832490 ACTTTTGGGTTATTTGAGCCCTC 59.168 43.478 0.00 0.00 42.77 4.30
4279 6034 3.856900 ACTTTTGGGTTATTTGAGCCCT 58.143 40.909 0.00 0.00 42.77 5.19
4280 6035 5.163447 GGATACTTTTGGGTTATTTGAGCCC 60.163 44.000 0.00 0.00 42.64 5.19
4281 6036 5.420739 TGGATACTTTTGGGTTATTTGAGCC 59.579 40.000 0.00 0.00 35.98 4.70
4282 6037 6.524101 TGGATACTTTTGGGTTATTTGAGC 57.476 37.500 0.00 0.00 37.61 4.26
4283 6038 8.364142 TGTTTGGATACTTTTGGGTTATTTGAG 58.636 33.333 0.00 0.00 37.61 3.02
4284 6039 8.251383 TGTTTGGATACTTTTGGGTTATTTGA 57.749 30.769 0.00 0.00 37.61 2.69
4285 6040 7.602265 CCTGTTTGGATACTTTTGGGTTATTTG 59.398 37.037 0.00 0.00 38.35 2.32
4286 6041 7.256511 CCCTGTTTGGATACTTTTGGGTTATTT 60.257 37.037 0.00 0.00 38.35 1.40
4287 6042 6.212589 CCCTGTTTGGATACTTTTGGGTTATT 59.787 38.462 0.00 0.00 38.35 1.40
4288 6043 5.719563 CCCTGTTTGGATACTTTTGGGTTAT 59.280 40.000 0.00 0.00 38.35 1.89
4289 6044 5.081032 CCCTGTTTGGATACTTTTGGGTTA 58.919 41.667 0.00 0.00 38.35 2.85
4290 6045 3.901222 CCCTGTTTGGATACTTTTGGGTT 59.099 43.478 0.00 0.00 38.35 4.11
4291 6046 3.141272 TCCCTGTTTGGATACTTTTGGGT 59.859 43.478 0.00 0.00 38.35 4.51
4292 6047 3.763897 CTCCCTGTTTGGATACTTTTGGG 59.236 47.826 0.00 0.00 38.35 4.12
4293 6048 3.763897 CCTCCCTGTTTGGATACTTTTGG 59.236 47.826 0.00 0.00 38.35 3.28
4294 6049 3.763897 CCCTCCCTGTTTGGATACTTTTG 59.236 47.826 0.00 0.00 38.35 2.44
4295 6050 3.401342 ACCCTCCCTGTTTGGATACTTTT 59.599 43.478 0.00 0.00 38.35 2.27
4296 6051 2.993863 ACCCTCCCTGTTTGGATACTTT 59.006 45.455 0.00 0.00 38.35 2.66
4297 6052 2.644151 ACCCTCCCTGTTTGGATACTT 58.356 47.619 0.00 0.00 38.35 2.24
4298 6053 2.361085 ACCCTCCCTGTTTGGATACT 57.639 50.000 0.00 0.00 38.35 2.12
4299 6054 3.778629 TCTAACCCTCCCTGTTTGGATAC 59.221 47.826 0.00 0.00 38.35 2.24
4300 6055 4.083080 TCTAACCCTCCCTGTTTGGATA 57.917 45.455 0.00 0.00 38.35 2.59
4301 6056 2.929301 TCTAACCCTCCCTGTTTGGAT 58.071 47.619 0.00 0.00 38.35 3.41
4302 6057 2.426431 TCTAACCCTCCCTGTTTGGA 57.574 50.000 0.00 0.00 38.35 3.53
4303 6058 3.356290 CATTCTAACCCTCCCTGTTTGG 58.644 50.000 0.00 0.00 0.00 3.28
4304 6059 3.356290 CCATTCTAACCCTCCCTGTTTG 58.644 50.000 0.00 0.00 0.00 2.93
4305 6060 2.311841 CCCATTCTAACCCTCCCTGTTT 59.688 50.000 0.00 0.00 0.00 2.83
4306 6061 1.923148 CCCATTCTAACCCTCCCTGTT 59.077 52.381 0.00 0.00 0.00 3.16
4307 6062 1.203570 ACCCATTCTAACCCTCCCTGT 60.204 52.381 0.00 0.00 0.00 4.00
4308 6063 1.596496 ACCCATTCTAACCCTCCCTG 58.404 55.000 0.00 0.00 0.00 4.45
4309 6064 2.378308 AACCCATTCTAACCCTCCCT 57.622 50.000 0.00 0.00 0.00 4.20
4310 6065 3.120898 ACTAACCCATTCTAACCCTCCC 58.879 50.000 0.00 0.00 0.00 4.30
4311 6066 4.384978 GGAACTAACCCATTCTAACCCTCC 60.385 50.000 0.00 0.00 0.00 4.30
4312 6067 4.226620 TGGAACTAACCCATTCTAACCCTC 59.773 45.833 0.00 0.00 0.00 4.30
4313 6068 4.180723 TGGAACTAACCCATTCTAACCCT 58.819 43.478 0.00 0.00 0.00 4.34
4314 6069 4.579647 TGGAACTAACCCATTCTAACCC 57.420 45.455 0.00 0.00 0.00 4.11
4315 6070 6.002653 AGATGGAACTAACCCATTCTAACC 57.997 41.667 0.00 0.00 43.96 2.85
4316 6071 8.434733 GTTAGATGGAACTAACCCATTCTAAC 57.565 38.462 17.77 17.77 43.96 2.34
4326 6081 6.990939 GGATAGTTGGGTTAGATGGAACTAAC 59.009 42.308 0.00 0.00 46.41 2.34
4327 6082 6.100714 GGGATAGTTGGGTTAGATGGAACTAA 59.899 42.308 0.00 0.00 33.90 2.24
4328 6083 5.605488 GGGATAGTTGGGTTAGATGGAACTA 59.395 44.000 0.00 0.00 34.51 2.24
4329 6084 4.412528 GGGATAGTTGGGTTAGATGGAACT 59.587 45.833 0.00 0.00 0.00 3.01
4330 6085 4.715713 GGGATAGTTGGGTTAGATGGAAC 58.284 47.826 0.00 0.00 0.00 3.62
4331 6086 3.389983 CGGGATAGTTGGGTTAGATGGAA 59.610 47.826 0.00 0.00 0.00 3.53
4332 6087 2.969950 CGGGATAGTTGGGTTAGATGGA 59.030 50.000 0.00 0.00 0.00 3.41
4333 6088 2.038557 CCGGGATAGTTGGGTTAGATGG 59.961 54.545 0.00 0.00 0.00 3.51
4334 6089 2.704065 ACCGGGATAGTTGGGTTAGATG 59.296 50.000 6.32 0.00 0.00 2.90
4335 6090 2.704065 CACCGGGATAGTTGGGTTAGAT 59.296 50.000 6.32 0.00 0.00 1.98
4336 6091 2.112998 CACCGGGATAGTTGGGTTAGA 58.887 52.381 6.32 0.00 0.00 2.10
4337 6092 1.140252 CCACCGGGATAGTTGGGTTAG 59.860 57.143 6.32 0.00 35.59 2.34
4338 6093 1.205966 CCACCGGGATAGTTGGGTTA 58.794 55.000 6.32 0.00 35.59 2.85
4339 6094 0.548197 TCCACCGGGATAGTTGGGTT 60.548 55.000 6.32 0.00 38.64 4.11
4340 6095 0.981277 CTCCACCGGGATAGTTGGGT 60.981 60.000 6.32 0.00 43.91 4.51
4341 6096 0.689745 TCTCCACCGGGATAGTTGGG 60.690 60.000 6.32 0.00 43.91 4.12
4342 6097 0.753262 CTCTCCACCGGGATAGTTGG 59.247 60.000 6.32 2.68 43.91 3.77
4343 6098 0.753262 CCTCTCCACCGGGATAGTTG 59.247 60.000 6.32 0.00 43.91 3.16
4344 6099 0.338814 ACCTCTCCACCGGGATAGTT 59.661 55.000 6.32 0.00 43.91 2.24
4345 6100 0.397254 CACCTCTCCACCGGGATAGT 60.397 60.000 6.32 0.00 43.91 2.12
4346 6101 1.749334 GCACCTCTCCACCGGGATAG 61.749 65.000 6.32 0.00 43.91 2.08
4347 6102 1.760875 GCACCTCTCCACCGGGATA 60.761 63.158 6.32 0.00 43.91 2.59
4348 6103 3.083997 GCACCTCTCCACCGGGAT 61.084 66.667 6.32 0.00 43.91 3.85
4349 6104 2.449967 TAAGCACCTCTCCACCGGGA 62.450 60.000 6.32 0.00 42.29 5.14
4350 6105 1.338136 ATAAGCACCTCTCCACCGGG 61.338 60.000 6.32 0.00 0.00 5.73
4351 6106 0.541863 AATAAGCACCTCTCCACCGG 59.458 55.000 0.00 0.00 0.00 5.28
4352 6107 2.009774 CAAATAAGCACCTCTCCACCG 58.990 52.381 0.00 0.00 0.00 4.94
4353 6108 2.369394 CCAAATAAGCACCTCTCCACC 58.631 52.381 0.00 0.00 0.00 4.61
4354 6109 2.290960 ACCCAAATAAGCACCTCTCCAC 60.291 50.000 0.00 0.00 0.00 4.02
4355 6110 1.992557 ACCCAAATAAGCACCTCTCCA 59.007 47.619 0.00 0.00 0.00 3.86
4356 6111 2.808906 ACCCAAATAAGCACCTCTCC 57.191 50.000 0.00 0.00 0.00 3.71
4357 6112 5.710567 ACTTTAACCCAAATAAGCACCTCTC 59.289 40.000 0.00 0.00 0.00 3.20
4358 6113 5.476945 CACTTTAACCCAAATAAGCACCTCT 59.523 40.000 0.00 0.00 0.00 3.69
4359 6114 5.336451 CCACTTTAACCCAAATAAGCACCTC 60.336 44.000 0.00 0.00 0.00 3.85
4360 6115 4.526650 CCACTTTAACCCAAATAAGCACCT 59.473 41.667 0.00 0.00 0.00 4.00
4361 6116 4.322424 CCCACTTTAACCCAAATAAGCACC 60.322 45.833 0.00 0.00 0.00 5.01
4362 6117 4.282449 ACCCACTTTAACCCAAATAAGCAC 59.718 41.667 0.00 0.00 0.00 4.40
4363 6118 4.484912 ACCCACTTTAACCCAAATAAGCA 58.515 39.130 0.00 0.00 0.00 3.91
4364 6119 5.477607 AACCCACTTTAACCCAAATAAGC 57.522 39.130 0.00 0.00 0.00 3.09
4365 6120 8.411991 TTCTAACCCACTTTAACCCAAATAAG 57.588 34.615 0.00 0.00 0.00 1.73
4366 6121 8.779096 TTTCTAACCCACTTTAACCCAAATAA 57.221 30.769 0.00 0.00 0.00 1.40
4367 6122 8.779096 TTTTCTAACCCACTTTAACCCAAATA 57.221 30.769 0.00 0.00 0.00 1.40
4368 6123 7.678207 TTTTCTAACCCACTTTAACCCAAAT 57.322 32.000 0.00 0.00 0.00 2.32
4369 6124 7.678207 ATTTTCTAACCCACTTTAACCCAAA 57.322 32.000 0.00 0.00 0.00 3.28
4370 6125 8.640651 GTTATTTTCTAACCCACTTTAACCCAA 58.359 33.333 0.00 0.00 0.00 4.12
4371 6126 8.005976 AGTTATTTTCTAACCCACTTTAACCCA 58.994 33.333 0.00 0.00 0.00 4.51
4372 6127 8.413309 AGTTATTTTCTAACCCACTTTAACCC 57.587 34.615 0.00 0.00 0.00 4.11
4373 6128 9.293404 AGAGTTATTTTCTAACCCACTTTAACC 57.707 33.333 0.00 0.00 0.00 2.85
4379 6134 9.722184 GAGTTAAGAGTTATTTTCTAACCCACT 57.278 33.333 0.00 0.00 0.00 4.00
4380 6135 9.722184 AGAGTTAAGAGTTATTTTCTAACCCAC 57.278 33.333 0.00 0.00 0.00 4.61
4404 6159 8.185506 TGTTTGGATACTCTAACACAGTTAGA 57.814 34.615 16.22 16.22 31.46 2.10
4405 6160 7.545965 CCTGTTTGGATACTCTAACACAGTTAG 59.454 40.741 9.97 9.97 38.35 2.34
4406 6161 7.383687 CCTGTTTGGATACTCTAACACAGTTA 58.616 38.462 0.00 0.00 38.35 2.24
4407 6162 6.231211 CCTGTTTGGATACTCTAACACAGTT 58.769 40.000 0.00 0.00 38.35 3.16
4408 6163 5.280011 CCCTGTTTGGATACTCTAACACAGT 60.280 44.000 0.00 0.00 38.35 3.55
4409 6164 5.178797 CCCTGTTTGGATACTCTAACACAG 58.821 45.833 0.00 0.00 38.35 3.66
4410 6165 4.564821 GCCCTGTTTGGATACTCTAACACA 60.565 45.833 0.00 0.00 38.35 3.72
4411 6166 3.939592 GCCCTGTTTGGATACTCTAACAC 59.060 47.826 0.00 0.00 38.35 3.32
4412 6167 3.054655 GGCCCTGTTTGGATACTCTAACA 60.055 47.826 0.00 0.00 38.35 2.41
4413 6168 3.054655 TGGCCCTGTTTGGATACTCTAAC 60.055 47.826 0.00 0.00 38.35 2.34
4414 6169 3.186283 TGGCCCTGTTTGGATACTCTAA 58.814 45.455 0.00 0.00 38.35 2.10
4415 6170 2.840511 TGGCCCTGTTTGGATACTCTA 58.159 47.619 0.00 0.00 38.35 2.43
4416 6171 1.668826 TGGCCCTGTTTGGATACTCT 58.331 50.000 0.00 0.00 38.35 3.24
4417 6172 2.576615 GATGGCCCTGTTTGGATACTC 58.423 52.381 0.00 0.00 38.35 2.59
4418 6173 1.134098 CGATGGCCCTGTTTGGATACT 60.134 52.381 0.00 0.00 38.35 2.12
4419 6174 1.308998 CGATGGCCCTGTTTGGATAC 58.691 55.000 0.00 0.00 38.35 2.24
4420 6175 0.916086 ACGATGGCCCTGTTTGGATA 59.084 50.000 0.00 0.00 38.35 2.59
4421 6176 0.039618 AACGATGGCCCTGTTTGGAT 59.960 50.000 0.00 0.00 38.35 3.41
4422 6177 0.178975 AAACGATGGCCCTGTTTGGA 60.179 50.000 14.17 0.00 38.35 3.53
4423 6178 1.201414 GTAAACGATGGCCCTGTTTGG 59.799 52.381 20.92 0.00 36.56 3.28
4424 6179 1.135803 CGTAAACGATGGCCCTGTTTG 60.136 52.381 20.92 7.20 43.02 2.93
4425 6180 1.161843 CGTAAACGATGGCCCTGTTT 58.838 50.000 17.68 17.68 43.02 2.83
4426 6181 0.035739 ACGTAAACGATGGCCCTGTT 59.964 50.000 9.86 0.00 43.02 3.16
4427 6182 0.035739 AACGTAAACGATGGCCCTGT 59.964 50.000 9.86 0.00 43.02 4.00
4428 6183 1.135803 CAAACGTAAACGATGGCCCTG 60.136 52.381 9.86 0.00 43.02 4.45
4429 6184 1.161843 CAAACGTAAACGATGGCCCT 58.838 50.000 9.86 0.00 43.02 5.19
4430 6185 0.169451 CCAAACGTAAACGATGGCCC 59.831 55.000 9.86 0.00 43.02 5.80
4431 6186 1.135888 GTCCAAACGTAAACGATGGCC 60.136 52.381 19.83 0.00 43.79 5.36
4432 6187 1.135888 GGTCCAAACGTAAACGATGGC 60.136 52.381 19.83 15.97 43.79 4.40
4433 6188 1.127213 CGGTCCAAACGTAAACGATGG 59.873 52.381 19.07 19.07 44.68 3.51
4434 6189 1.794116 ACGGTCCAAACGTAAACGATG 59.206 47.619 9.86 7.66 43.60 3.84
4435 6190 2.153366 ACGGTCCAAACGTAAACGAT 57.847 45.000 9.86 0.00 43.60 3.73
4436 6191 1.857837 GAACGGTCCAAACGTAAACGA 59.142 47.619 9.86 0.00 44.83 3.85
4437 6192 1.592081 TGAACGGTCCAAACGTAAACG 59.408 47.619 0.00 0.04 44.83 3.60
4438 6193 2.351111 TGTGAACGGTCCAAACGTAAAC 59.649 45.455 0.00 0.00 44.83 2.01
4439 6194 2.625737 TGTGAACGGTCCAAACGTAAA 58.374 42.857 0.00 0.00 44.83 2.01
4440 6195 2.306341 TGTGAACGGTCCAAACGTAA 57.694 45.000 0.00 0.00 44.83 3.18
4441 6196 2.529780 ATGTGAACGGTCCAAACGTA 57.470 45.000 0.00 0.00 44.83 3.57
4443 6198 2.766970 AAATGTGAACGGTCCAAACG 57.233 45.000 0.00 0.00 37.36 3.60
4444 6199 8.077386 TCTATTAAAAATGTGAACGGTCCAAAC 58.923 33.333 0.00 0.00 0.00 2.93
4445 6200 8.167605 TCTATTAAAAATGTGAACGGTCCAAA 57.832 30.769 0.00 0.00 0.00 3.28
4446 6201 7.747155 TCTATTAAAAATGTGAACGGTCCAA 57.253 32.000 0.00 0.00 0.00 3.53
4447 6202 7.931578 ATCTATTAAAAATGTGAACGGTCCA 57.068 32.000 0.00 0.00 0.00 4.02
4450 6205 9.783256 GCTAAATCTATTAAAAATGTGAACGGT 57.217 29.630 0.00 0.00 0.00 4.83
4451 6206 9.233232 GGCTAAATCTATTAAAAATGTGAACGG 57.767 33.333 0.00 0.00 0.00 4.44
4452 6207 9.781834 TGGCTAAATCTATTAAAAATGTGAACG 57.218 29.630 0.00 0.00 0.00 3.95
4484 6241 3.686016 TGGCCTTAAGTCAAACATCTCC 58.314 45.455 3.32 0.00 0.00 3.71
4485 6242 4.379918 GCTTGGCCTTAAGTCAAACATCTC 60.380 45.833 3.32 0.00 0.00 2.75
4500 6257 4.800582 GCTTGAAGTTTTTATGCTTGGCCT 60.801 41.667 3.32 0.00 0.00 5.19
4502 6259 4.057432 TGCTTGAAGTTTTTATGCTTGGC 58.943 39.130 0.00 0.00 0.00 4.52
4504 6261 5.927689 TCCATGCTTGAAGTTTTTATGCTTG 59.072 36.000 0.22 0.00 0.00 4.01
4507 6264 5.473039 ACTCCATGCTTGAAGTTTTTATGC 58.527 37.500 0.22 0.00 0.00 3.14
4508 6265 7.542130 GGTTACTCCATGCTTGAAGTTTTTATG 59.458 37.037 0.00 0.00 35.97 1.90
4509 6266 7.232534 TGGTTACTCCATGCTTGAAGTTTTTAT 59.767 33.333 0.00 0.00 41.93 1.40
4510 6267 6.547880 TGGTTACTCCATGCTTGAAGTTTTTA 59.452 34.615 0.00 0.00 41.93 1.52
4511 6268 5.362430 TGGTTACTCCATGCTTGAAGTTTTT 59.638 36.000 0.00 0.00 41.93 1.94
4514 6271 4.098914 TGGTTACTCCATGCTTGAAGTT 57.901 40.909 0.00 0.00 41.93 2.66
4515 6272 3.788227 TGGTTACTCCATGCTTGAAGT 57.212 42.857 0.22 0.00 41.93 3.01
4525 6289 8.692710 CATACTTTAGTACTGATGGTTACTCCA 58.307 37.037 5.39 0.00 41.02 3.86
4534 6298 7.495606 TCCAACATGCATACTTTAGTACTGATG 59.504 37.037 5.39 2.05 32.72 3.07
4536 6300 6.941857 TCCAACATGCATACTTTAGTACTGA 58.058 36.000 5.39 0.00 32.72 3.41
4541 6305 8.046708 TCATAGTTCCAACATGCATACTTTAGT 58.953 33.333 0.00 0.00 0.00 2.24
4547 6311 4.576053 TGCTCATAGTTCCAACATGCATAC 59.424 41.667 0.00 0.00 0.00 2.39
4555 6319 9.503427 GTAATATTTTGTGCTCATAGTTCCAAC 57.497 33.333 0.00 0.00 0.00 3.77
4573 6337 9.326413 CCTCGTGAATTCCTTACTGTAATATTT 57.674 33.333 2.27 0.00 0.00 1.40
4584 6348 1.580059 AGGGCCTCGTGAATTCCTTA 58.420 50.000 0.00 0.00 0.00 2.69
4595 6363 1.550976 GGGTATCAGATTAGGGCCTCG 59.449 57.143 10.74 0.00 0.00 4.63
4687 6461 3.470709 ACCACATTAGAATGATCAGGCG 58.529 45.455 9.21 0.00 39.67 5.52
4720 6494 0.541863 CCCTTCCCTCGTAGCAATGT 59.458 55.000 0.00 0.00 0.00 2.71
4721 6495 0.830648 TCCCTTCCCTCGTAGCAATG 59.169 55.000 0.00 0.00 0.00 2.82
4722 6496 1.123928 CTCCCTTCCCTCGTAGCAAT 58.876 55.000 0.00 0.00 0.00 3.56
4723 6497 0.976073 CCTCCCTTCCCTCGTAGCAA 60.976 60.000 0.00 0.00 0.00 3.91
4724 6498 1.381327 CCTCCCTTCCCTCGTAGCA 60.381 63.158 0.00 0.00 0.00 3.49
4725 6499 1.076192 TCCTCCCTTCCCTCGTAGC 60.076 63.158 0.00 0.00 0.00 3.58
4726 6500 0.551879 TCTCCTCCCTTCCCTCGTAG 59.448 60.000 0.00 0.00 0.00 3.51
4727 6501 0.258194 GTCTCCTCCCTTCCCTCGTA 59.742 60.000 0.00 0.00 0.00 3.43
4728 6502 1.000612 GTCTCCTCCCTTCCCTCGT 59.999 63.158 0.00 0.00 0.00 4.18
4729 6503 2.122167 CGTCTCCTCCCTTCCCTCG 61.122 68.421 0.00 0.00 0.00 4.63
4730 6504 0.753848 CTCGTCTCCTCCCTTCCCTC 60.754 65.000 0.00 0.00 0.00 4.30
4731 6505 1.308326 CTCGTCTCCTCCCTTCCCT 59.692 63.158 0.00 0.00 0.00 4.20
4732 6506 1.758906 CCTCGTCTCCTCCCTTCCC 60.759 68.421 0.00 0.00 0.00 3.97
4733 6507 2.428085 GCCTCGTCTCCTCCCTTCC 61.428 68.421 0.00 0.00 0.00 3.46
4734 6508 1.045911 ATGCCTCGTCTCCTCCCTTC 61.046 60.000 0.00 0.00 0.00 3.46
4735 6509 1.002274 ATGCCTCGTCTCCTCCCTT 59.998 57.895 0.00 0.00 0.00 3.95
4736 6510 1.760086 CATGCCTCGTCTCCTCCCT 60.760 63.158 0.00 0.00 0.00 4.20
4737 6511 2.818132 CATGCCTCGTCTCCTCCC 59.182 66.667 0.00 0.00 0.00 4.30
4738 6512 2.107953 GCATGCCTCGTCTCCTCC 59.892 66.667 6.36 0.00 0.00 4.30
4739 6513 1.227205 CTGCATGCCTCGTCTCCTC 60.227 63.158 16.68 0.00 0.00 3.71
4740 6514 1.683707 TCTGCATGCCTCGTCTCCT 60.684 57.895 16.68 0.00 0.00 3.69
4741 6515 1.520342 GTCTGCATGCCTCGTCTCC 60.520 63.158 16.68 0.00 0.00 3.71
4742 6516 1.875813 CGTCTGCATGCCTCGTCTC 60.876 63.158 16.68 0.00 0.00 3.36
4743 6517 1.877576 TTCGTCTGCATGCCTCGTCT 61.878 55.000 16.68 0.00 0.00 4.18
4744 6518 1.446099 TTCGTCTGCATGCCTCGTC 60.446 57.895 16.68 0.75 0.00 4.20
4745 6519 1.738099 GTTCGTCTGCATGCCTCGT 60.738 57.895 16.68 0.00 0.00 4.18
4746 6520 0.179137 TAGTTCGTCTGCATGCCTCG 60.179 55.000 16.68 16.44 0.00 4.63
4747 6521 2.231215 ATAGTTCGTCTGCATGCCTC 57.769 50.000 16.68 4.52 0.00 4.70
4748 6522 2.679837 CAAATAGTTCGTCTGCATGCCT 59.320 45.455 16.68 5.38 0.00 4.75
4749 6523 2.223340 CCAAATAGTTCGTCTGCATGCC 60.223 50.000 16.68 0.00 0.00 4.40
4750 6524 2.420022 ACCAAATAGTTCGTCTGCATGC 59.580 45.455 11.82 11.82 0.00 4.06
4751 6525 3.935203 AGACCAAATAGTTCGTCTGCATG 59.065 43.478 2.31 0.00 34.35 4.06
4752 6526 4.184629 GAGACCAAATAGTTCGTCTGCAT 58.815 43.478 7.92 0.00 35.75 3.96
4753 6527 3.006430 TGAGACCAAATAGTTCGTCTGCA 59.994 43.478 7.92 3.92 35.75 4.41
4754 6528 3.368236 GTGAGACCAAATAGTTCGTCTGC 59.632 47.826 7.92 1.61 35.75 4.26
4755 6529 4.623167 CAGTGAGACCAAATAGTTCGTCTG 59.377 45.833 7.92 0.00 35.75 3.51
4756 6530 4.322049 CCAGTGAGACCAAATAGTTCGTCT 60.322 45.833 2.75 2.75 38.27 4.18
4757 6531 3.927142 CCAGTGAGACCAAATAGTTCGTC 59.073 47.826 0.00 0.00 0.00 4.20
4758 6532 3.864921 GCCAGTGAGACCAAATAGTTCGT 60.865 47.826 0.00 0.00 0.00 3.85
4759 6533 2.673368 GCCAGTGAGACCAAATAGTTCG 59.327 50.000 0.00 0.00 0.00 3.95
4760 6534 3.010420 GGCCAGTGAGACCAAATAGTTC 58.990 50.000 0.00 0.00 0.00 3.01
4761 6535 2.644798 AGGCCAGTGAGACCAAATAGTT 59.355 45.455 5.01 0.00 0.00 2.24
4762 6536 2.269940 AGGCCAGTGAGACCAAATAGT 58.730 47.619 5.01 0.00 0.00 2.12
4763 6537 3.012518 CAAGGCCAGTGAGACCAAATAG 58.987 50.000 5.01 0.00 0.00 1.73
4764 6538 2.290896 CCAAGGCCAGTGAGACCAAATA 60.291 50.000 5.01 0.00 0.00 1.40
4765 6539 1.548582 CCAAGGCCAGTGAGACCAAAT 60.549 52.381 5.01 0.00 0.00 2.32
4766 6540 0.178992 CCAAGGCCAGTGAGACCAAA 60.179 55.000 5.01 0.00 0.00 3.28
4767 6541 1.059584 TCCAAGGCCAGTGAGACCAA 61.060 55.000 5.01 0.00 0.00 3.67
4768 6542 0.842030 ATCCAAGGCCAGTGAGACCA 60.842 55.000 5.01 0.00 0.00 4.02
4769 6543 0.393537 CATCCAAGGCCAGTGAGACC 60.394 60.000 5.01 0.00 0.00 3.85
4770 6544 1.028868 GCATCCAAGGCCAGTGAGAC 61.029 60.000 5.01 0.00 0.00 3.36
4771 6545 1.203441 AGCATCCAAGGCCAGTGAGA 61.203 55.000 5.01 2.90 0.00 3.27
4772 6546 1.030488 CAGCATCCAAGGCCAGTGAG 61.030 60.000 5.01 0.00 0.00 3.51
4773 6547 1.001764 CAGCATCCAAGGCCAGTGA 60.002 57.895 5.01 0.00 0.00 3.41
4774 6548 2.050350 CCAGCATCCAAGGCCAGTG 61.050 63.158 5.01 1.69 0.00 3.66
4775 6549 2.357836 CCAGCATCCAAGGCCAGT 59.642 61.111 5.01 0.00 0.00 4.00
4776 6550 2.050350 CACCAGCATCCAAGGCCAG 61.050 63.158 5.01 0.00 0.00 4.85
4777 6551 2.036098 CACCAGCATCCAAGGCCA 59.964 61.111 5.01 0.00 0.00 5.36
4778 6552 3.455469 GCACCAGCATCCAAGGCC 61.455 66.667 0.00 0.00 41.58 5.19
4779 6553 2.362120 AGCACCAGCATCCAAGGC 60.362 61.111 0.00 0.00 45.49 4.35
4780 6554 2.707849 GCAGCACCAGCATCCAAGG 61.708 63.158 0.00 0.00 45.49 3.61
4781 6555 1.677966 AGCAGCACCAGCATCCAAG 60.678 57.895 0.00 0.00 45.49 3.61
4782 6556 1.974875 CAGCAGCACCAGCATCCAA 60.975 57.895 0.00 0.00 45.49 3.53
4783 6557 2.360726 CAGCAGCACCAGCATCCA 60.361 61.111 0.00 0.00 45.49 3.41
4784 6558 3.138798 CCAGCAGCACCAGCATCC 61.139 66.667 0.00 0.00 45.49 3.51
4785 6559 3.823330 GCCAGCAGCACCAGCATC 61.823 66.667 0.00 0.00 45.49 3.91
4815 6589 4.504916 CCGGAGCTGCCTCGACAG 62.505 72.222 12.64 0.00 39.06 3.51


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.