Multiple sequence alignment - TraesCS4B01G031700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G031700 chr4B 100.000 4561 0 0 1 4561 23665465 23660905 0.000000e+00 8423.0
1 TraesCS4B01G031700 chr4B 89.474 95 5 4 3922 4014 135215372 135215463 1.040000e-21 115.0
2 TraesCS4B01G031700 chr4B 80.120 166 24 9 2473 2634 483581979 483582139 1.040000e-21 115.0
3 TraesCS4B01G031700 chr4B 88.000 100 7 2 3921 4015 11736927 11736828 3.730000e-21 113.0
4 TraesCS4B01G031700 chr4B 95.652 46 2 0 2372 2417 72655824 72655869 1.760000e-09 75.0
5 TraesCS4B01G031700 chr4B 97.500 40 1 0 2378 2417 449811369 449811408 8.190000e-08 69.4
6 TraesCS4B01G031700 chr4D 88.669 1518 113 30 2438 3925 13057852 13056364 0.000000e+00 1796.0
7 TraesCS4B01G031700 chr4D 83.851 1963 142 80 125 1985 13060250 13058361 0.000000e+00 1707.0
8 TraesCS4B01G031700 chr4D 92.875 407 19 7 4012 4415 13056363 13055964 2.360000e-162 582.0
9 TraesCS4B01G031700 chr4D 87.726 277 15 5 2122 2379 13058127 13057851 5.730000e-79 305.0
10 TraesCS4B01G031700 chr4D 92.553 94 7 0 4468 4561 13045444 13045351 7.960000e-28 135.0
11 TraesCS4B01G031700 chr4D 81.250 160 25 5 2478 2634 74079347 74079504 1.720000e-24 124.0
12 TraesCS4B01G031700 chr4A 89.474 1235 67 28 770 1984 589501937 589500746 0.000000e+00 1502.0
13 TraesCS4B01G031700 chr4A 92.350 915 59 8 2747 3656 589500146 589499238 0.000000e+00 1291.0
14 TraesCS4B01G031700 chr4A 93.088 217 7 5 4346 4561 589498179 589497970 1.230000e-80 311.0
15 TraesCS4B01G031700 chr4A 93.970 199 9 3 4150 4346 589498644 589498447 9.590000e-77 298.0
16 TraesCS4B01G031700 chr4A 87.925 265 15 8 2119 2372 589500542 589500284 3.450000e-76 296.0
17 TraesCS4B01G031700 chr4A 83.607 244 19 11 339 565 589502712 589502473 4.620000e-50 209.0
18 TraesCS4B01G031700 chr4A 88.095 168 11 6 97 261 589503099 589502938 1.670000e-44 191.0
19 TraesCS4B01G031700 chr4A 80.769 156 25 5 2482 2634 30742733 30742886 2.880000e-22 117.0
20 TraesCS4B01G031700 chr4A 88.542 96 9 1 3830 3925 589499034 589498941 1.040000e-21 115.0
21 TraesCS4B01G031700 chr4A 86.567 67 4 3 4013 4079 589499094 589499033 8.190000e-08 69.4
22 TraesCS4B01G031700 chr7B 88.525 366 33 3 1247 1612 731101458 731101814 7.010000e-118 435.0
23 TraesCS4B01G031700 chr7B 78.142 366 63 10 1250 1612 731126071 731125720 2.760000e-52 217.0
24 TraesCS4B01G031700 chr7B 77.647 255 40 10 1361 1612 731117417 731117177 6.150000e-29 139.0
25 TraesCS4B01G031700 chr7B 89.362 94 7 3 3925 4017 559534968 559534877 1.040000e-21 115.0
26 TraesCS4B01G031700 chr7B 89.157 83 9 0 1697 1779 686539410 686539492 2.240000e-18 104.0
27 TraesCS4B01G031700 chr7B 80.000 140 19 2 1856 1986 731102078 731102217 1.350000e-15 95.3
28 TraesCS4B01G031700 chr7D 87.500 360 36 3 1253 1612 629098545 629098195 1.530000e-109 407.0
29 TraesCS4B01G031700 chr7D 80.965 373 66 5 2945 3315 629295924 629296293 1.610000e-74 291.0
30 TraesCS4B01G031700 chr7D 83.000 200 22 4 1413 1612 628766008 628765821 2.180000e-38 171.0
31 TraesCS4B01G031700 chr7D 76.174 298 50 10 1318 1612 448340132 448339853 2.210000e-28 137.0
32 TraesCS4B01G031700 chr7D 81.481 162 23 6 2477 2634 454079072 454079230 4.790000e-25 126.0
33 TraesCS4B01G031700 chr7D 86.207 116 7 4 3918 4024 506679430 506679545 2.880000e-22 117.0
34 TraesCS4B01G031700 chr7D 90.000 50 3 2 2377 2425 501113778 501113826 3.810000e-06 63.9
35 TraesCS4B01G031700 chr7A 86.047 387 41 6 1229 1612 725162029 725162405 1.980000e-108 403.0
36 TraesCS4B01G031700 chr7A 81.073 354 49 7 1259 1612 725212640 725212305 2.710000e-67 267.0
37 TraesCS4B01G031700 chr5B 83.832 334 54 0 2945 3278 5054032 5053699 7.360000e-83 318.0
38 TraesCS4B01G031700 chr5B 79.552 357 65 8 1260 1612 5055693 5055341 9.800000e-62 248.0
39 TraesCS4B01G031700 chr5B 82.581 155 21 6 2482 2634 176588378 176588228 1.030000e-26 132.0
40 TraesCS4B01G031700 chr5B 97.674 43 1 0 2375 2417 51031108 51031150 1.760000e-09 75.0
41 TraesCS4B01G031700 chr5B 95.556 45 1 1 2373 2417 121676288 121676331 2.280000e-08 71.3
42 TraesCS4B01G031700 chr5A 80.056 356 65 5 1260 1612 2412269 2411917 4.530000e-65 259.0
43 TraesCS4B01G031700 chr5A 97.500 40 1 0 2378 2417 258060790 258060751 8.190000e-08 69.4
44 TraesCS4B01G031700 chr5D 78.933 356 69 6 1260 1612 3568864 3568512 2.120000e-58 237.0
45 TraesCS4B01G031700 chr5D 92.632 95 5 1 3922 4014 134780505 134780599 7.960000e-28 135.0
46 TraesCS4B01G031700 chr5D 85.455 110 12 3 3918 4023 491004598 491004707 1.340000e-20 111.0
47 TraesCS4B01G031700 chr3A 74.584 421 61 35 1215 1620 552803029 552803418 4.760000e-30 143.0
48 TraesCS4B01G031700 chr3A 88.776 98 8 2 3920 4014 80090958 80090861 2.880000e-22 117.0
49 TraesCS4B01G031700 chr3D 73.966 411 68 28 1221 1620 103233238 103232856 3.700000e-26 130.0
50 TraesCS4B01G031700 chr3D 95.652 46 2 0 1552 1597 546783850 546783805 1.760000e-09 75.0
51 TraesCS4B01G031700 chr6B 87.736 106 13 0 3919 4024 707934700 707934805 1.720000e-24 124.0
52 TraesCS4B01G031700 chr6B 80.380 158 25 6 2481 2635 530129117 530128963 1.040000e-21 115.0
53 TraesCS4B01G031700 chr6B 88.235 51 5 1 2374 2423 69558457 69558407 4.930000e-05 60.2
54 TraesCS4B01G031700 chr1A 89.474 95 10 0 3922 4016 572016830 572016736 2.230000e-23 121.0
55 TraesCS4B01G031700 chr1A 80.625 160 22 9 2480 2634 516787041 516787196 1.040000e-21 115.0
56 TraesCS4B01G031700 chr1A 94.444 36 1 1 1947 1982 219385124 219385090 2.000000e-03 54.7
57 TraesCS4B01G031700 chr1A 94.444 36 1 1 1947 1982 219385759 219385725 2.000000e-03 54.7
58 TraesCS4B01G031700 chr6D 80.892 157 24 6 2482 2634 303059853 303060007 8.020000e-23 119.0
59 TraesCS4B01G031700 chr6D 86.170 94 13 0 4071 4164 65636447 65636540 8.070000e-18 102.0
60 TraesCS4B01G031700 chr6D 93.478 46 2 1 4357 4402 10461060 10461016 2.940000e-07 67.6
61 TraesCS4B01G031700 chr1B 80.247 162 26 6 2482 2639 390622293 390622452 2.880000e-22 117.0
62 TraesCS4B01G031700 chr1B 94.444 36 1 1 1947 1982 262532223 262532257 2.000000e-03 54.7
63 TraesCS4B01G031700 chr2B 97.561 41 1 0 2377 2417 799384098 799384058 2.280000e-08 71.3
64 TraesCS4B01G031700 chr2B 97.500 40 1 0 2378 2417 768661125 768661086 8.190000e-08 69.4
65 TraesCS4B01G031700 chr3B 91.837 49 3 1 4354 4402 309877459 309877506 2.940000e-07 67.6
66 TraesCS4B01G031700 chr2A 91.837 49 3 1 4354 4402 445990246 445990293 2.940000e-07 67.6
67 TraesCS4B01G031700 chr1D 94.444 36 1 1 1947 1982 188344035 188344069 2.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G031700 chr4B 23660905 23665465 4560 True 8423.000000 8423 100.000000 1 4561 1 chr4B.!!$R2 4560
1 TraesCS4B01G031700 chr4D 13055964 13060250 4286 True 1097.500000 1796 88.280250 125 4415 4 chr4D.!!$R2 4290
2 TraesCS4B01G031700 chr4A 589497970 589503099 5129 True 475.822222 1502 89.290889 97 4561 9 chr4A.!!$R1 4464
3 TraesCS4B01G031700 chr7B 731101458 731102217 759 False 265.150000 435 84.262500 1247 1986 2 chr7B.!!$F2 739
4 TraesCS4B01G031700 chr5B 5053699 5055693 1994 True 283.000000 318 81.692000 1260 3278 2 chr5B.!!$R2 2018

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
590 785 0.036732 AACCAAGCGAGCAGAATGGA 59.963 50.000 13.39 0.0 35.86 3.41 F
932 1493 0.038159 GATCGATCCATCCACGTCCC 60.038 60.000 14.76 0.0 0.00 4.46 F
2327 3152 0.179001 ACCGGCCCTTATTACATGGC 60.179 55.000 0.00 0.0 43.26 4.40 F
2490 3319 1.198637 ACGTTCGAAACTACTCCCTCG 59.801 52.381 0.00 0.0 0.00 4.63 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2232 3049 0.458889 TCGTACGTAGCCAATGTGCC 60.459 55.000 16.05 0.0 0.00 5.01 R
2753 3639 1.000283 CCATCTAGATGTCCTGCCGTC 60.000 57.143 27.03 0.0 37.11 4.79 R
3427 4619 0.454620 CAAGAGCGACGTAACGAGCT 60.455 55.000 0.00 0.0 43.36 4.09 R
3787 4993 0.698818 AATTCCTCTTTGGCCGGACT 59.301 50.000 9.82 0.0 35.26 3.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 3.829948 GTGATGAAGACTTGCCACATTG 58.170 45.455 0.00 0.00 0.00 2.82
22 23 2.229543 TGATGAAGACTTGCCACATTGC 59.770 45.455 0.00 0.00 0.00 3.56
23 24 1.985473 TGAAGACTTGCCACATTGCT 58.015 45.000 0.00 0.00 0.00 3.91
24 25 2.309613 TGAAGACTTGCCACATTGCTT 58.690 42.857 0.00 0.00 0.00 3.91
25 26 3.485394 TGAAGACTTGCCACATTGCTTA 58.515 40.909 0.00 0.00 0.00 3.09
26 27 3.503363 TGAAGACTTGCCACATTGCTTAG 59.497 43.478 0.00 0.00 0.00 2.18
27 28 1.815003 AGACTTGCCACATTGCTTAGC 59.185 47.619 0.00 0.00 0.00 3.09
28 29 1.815003 GACTTGCCACATTGCTTAGCT 59.185 47.619 5.60 0.00 0.00 3.32
29 30 1.542915 ACTTGCCACATTGCTTAGCTG 59.457 47.619 5.60 0.00 0.00 4.24
30 31 1.814394 CTTGCCACATTGCTTAGCTGA 59.186 47.619 5.60 0.00 0.00 4.26
31 32 1.908344 TGCCACATTGCTTAGCTGAA 58.092 45.000 5.60 0.00 0.00 3.02
32 33 2.237643 TGCCACATTGCTTAGCTGAAA 58.762 42.857 5.60 0.00 0.00 2.69
33 34 2.030007 TGCCACATTGCTTAGCTGAAAC 60.030 45.455 5.60 0.00 0.00 2.78
34 35 2.229784 GCCACATTGCTTAGCTGAAACT 59.770 45.455 5.60 0.00 0.00 2.66
35 36 3.671702 GCCACATTGCTTAGCTGAAACTC 60.672 47.826 5.60 0.00 0.00 3.01
36 37 3.755378 CCACATTGCTTAGCTGAAACTCT 59.245 43.478 5.60 0.00 0.00 3.24
37 38 4.379186 CCACATTGCTTAGCTGAAACTCTG 60.379 45.833 5.60 0.00 0.00 3.35
38 39 4.214971 CACATTGCTTAGCTGAAACTCTGT 59.785 41.667 5.60 0.00 0.00 3.41
39 40 4.823989 ACATTGCTTAGCTGAAACTCTGTT 59.176 37.500 5.60 0.00 0.00 3.16
40 41 5.300286 ACATTGCTTAGCTGAAACTCTGTTT 59.700 36.000 5.60 0.00 0.00 2.83
41 42 5.424121 TTGCTTAGCTGAAACTCTGTTTC 57.576 39.130 14.14 14.14 0.00 2.78
42 43 4.708177 TGCTTAGCTGAAACTCTGTTTCT 58.292 39.130 19.52 6.67 0.00 2.52
43 44 5.126067 TGCTTAGCTGAAACTCTGTTTCTT 58.874 37.500 19.52 10.65 0.00 2.52
44 45 5.590259 TGCTTAGCTGAAACTCTGTTTCTTT 59.410 36.000 19.52 10.39 0.00 2.52
45 46 6.095440 TGCTTAGCTGAAACTCTGTTTCTTTT 59.905 34.615 19.52 10.13 0.00 2.27
46 47 6.975197 GCTTAGCTGAAACTCTGTTTCTTTTT 59.025 34.615 19.52 8.85 0.00 1.94
47 48 7.043788 GCTTAGCTGAAACTCTGTTTCTTTTTG 60.044 37.037 19.52 9.75 0.00 2.44
48 49 6.272822 AGCTGAAACTCTGTTTCTTTTTGT 57.727 33.333 19.52 1.93 0.00 2.83
49 50 6.691508 AGCTGAAACTCTGTTTCTTTTTGTT 58.308 32.000 19.52 5.22 0.00 2.83
50 51 7.826690 AGCTGAAACTCTGTTTCTTTTTGTTA 58.173 30.769 19.52 1.71 0.00 2.41
51 52 8.470002 AGCTGAAACTCTGTTTCTTTTTGTTAT 58.530 29.630 19.52 0.00 0.00 1.89
52 53 8.746751 GCTGAAACTCTGTTTCTTTTTGTTATC 58.253 33.333 19.52 0.00 0.00 1.75
53 54 8.835467 TGAAACTCTGTTTCTTTTTGTTATCG 57.165 30.769 19.52 0.00 0.00 2.92
54 55 8.455682 TGAAACTCTGTTTCTTTTTGTTATCGT 58.544 29.630 19.52 0.00 0.00 3.73
55 56 8.836959 AAACTCTGTTTCTTTTTGTTATCGTC 57.163 30.769 0.00 0.00 0.00 4.20
56 57 6.646636 ACTCTGTTTCTTTTTGTTATCGTCG 58.353 36.000 0.00 0.00 0.00 5.12
57 58 5.981174 TCTGTTTCTTTTTGTTATCGTCGG 58.019 37.500 0.00 0.00 0.00 4.79
58 59 5.754406 TCTGTTTCTTTTTGTTATCGTCGGA 59.246 36.000 0.00 0.00 0.00 4.55
59 60 5.981174 TGTTTCTTTTTGTTATCGTCGGAG 58.019 37.500 0.00 0.00 0.00 4.63
60 61 5.754406 TGTTTCTTTTTGTTATCGTCGGAGA 59.246 36.000 0.00 0.00 0.00 3.71
61 62 6.425721 TGTTTCTTTTTGTTATCGTCGGAGAT 59.574 34.615 0.00 0.00 40.67 2.75
62 63 7.599621 TGTTTCTTTTTGTTATCGTCGGAGATA 59.400 33.333 0.00 0.00 40.67 1.98
63 64 7.515957 TTCTTTTTGTTATCGTCGGAGATAC 57.484 36.000 0.00 0.00 40.67 2.24
64 65 6.860080 TCTTTTTGTTATCGTCGGAGATACT 58.140 36.000 0.00 0.00 40.67 2.12
65 66 6.971184 TCTTTTTGTTATCGTCGGAGATACTC 59.029 38.462 0.00 0.00 40.67 2.59
66 67 4.825546 TTGTTATCGTCGGAGATACTCC 57.174 45.455 7.65 7.65 46.44 3.85
77 78 4.759516 GGAGATACTCCTTCGTCTCATC 57.240 50.000 10.16 0.00 46.41 2.92
78 79 4.138290 GGAGATACTCCTTCGTCTCATCA 58.862 47.826 10.16 0.00 46.41 3.07
79 80 4.764823 GGAGATACTCCTTCGTCTCATCAT 59.235 45.833 10.16 0.00 46.41 2.45
80 81 5.941058 GGAGATACTCCTTCGTCTCATCATA 59.059 44.000 10.16 0.00 46.41 2.15
81 82 6.431543 GGAGATACTCCTTCGTCTCATCATAA 59.568 42.308 10.16 0.00 46.41 1.90
82 83 7.122055 GGAGATACTCCTTCGTCTCATCATAAT 59.878 40.741 10.16 0.00 46.41 1.28
83 84 9.168451 GAGATACTCCTTCGTCTCATCATAATA 57.832 37.037 0.00 0.00 37.60 0.98
84 85 9.693739 AGATACTCCTTCGTCTCATCATAATAT 57.306 33.333 0.00 0.00 0.00 1.28
88 89 9.521841 ACTCCTTCGTCTCATCATAATATAAGA 57.478 33.333 0.00 0.00 0.00 2.10
90 91 9.521841 TCCTTCGTCTCATCATAATATAAGAGT 57.478 33.333 0.00 0.00 0.00 3.24
107 108 5.432885 AAGAGTATTTTTGACACGGTTGG 57.567 39.130 0.00 0.00 0.00 3.77
108 109 3.818773 AGAGTATTTTTGACACGGTTGGG 59.181 43.478 0.00 0.00 0.00 4.12
109 110 2.888414 AGTATTTTTGACACGGTTGGGG 59.112 45.455 0.00 0.00 0.00 4.96
110 111 0.391228 ATTTTTGACACGGTTGGGGC 59.609 50.000 0.00 0.00 0.00 5.80
117 118 4.596585 ACGGTTGGGGCTTGTGGG 62.597 66.667 0.00 0.00 0.00 4.61
120 121 2.600470 GTTGGGGCTTGTGGGTCC 60.600 66.667 0.00 0.00 0.00 4.46
175 176 2.174360 GGTCGGGTTTGTCCTAGTACT 58.826 52.381 0.00 0.00 36.25 2.73
176 177 3.356290 GGTCGGGTTTGTCCTAGTACTA 58.644 50.000 1.89 1.89 36.25 1.82
177 178 3.379688 GGTCGGGTTTGTCCTAGTACTAG 59.620 52.174 21.11 21.11 36.25 2.57
300 419 1.546961 GTTGAGAGAAGACGGGAGGA 58.453 55.000 0.00 0.00 0.00 3.71
314 433 1.139947 GAGGAAGGAAGCTCGTCGG 59.860 63.158 0.00 0.00 0.00 4.79
315 434 1.596895 GAGGAAGGAAGCTCGTCGGT 61.597 60.000 0.00 0.00 0.00 4.69
316 435 1.153804 GGAAGGAAGCTCGTCGGTC 60.154 63.158 0.00 0.00 0.00 4.79
317 436 1.514443 GAAGGAAGCTCGTCGGTCG 60.514 63.158 0.00 0.00 41.41 4.79
319 438 2.197643 AAGGAAGCTCGTCGGTCGTC 62.198 60.000 0.00 0.00 40.80 4.20
320 439 2.688794 GGAAGCTCGTCGGTCGTCT 61.689 63.158 0.00 0.00 40.80 4.18
364 513 5.776173 TGGATTGTTTAACAACCGAATGT 57.224 34.783 13.01 0.00 41.40 2.71
388 545 0.960364 TTCATTCTGCGGTTGGCTCC 60.960 55.000 0.00 0.00 44.05 4.70
396 553 1.144936 CGGTTGGCTCCTGATCCTC 59.855 63.158 0.00 0.00 0.00 3.71
400 557 0.324738 TTGGCTCCTGATCCTCGAGT 60.325 55.000 12.31 0.00 0.00 4.18
401 558 0.551396 TGGCTCCTGATCCTCGAGTA 59.449 55.000 12.31 0.00 0.00 2.59
434 592 0.310854 GTCCACAGCCAAACCGAAAG 59.689 55.000 0.00 0.00 0.00 2.62
435 593 0.106918 TCCACAGCCAAACCGAAAGT 60.107 50.000 0.00 0.00 0.00 2.66
466 631 9.549078 AGAAAAATACTACTTAGCCTGCTAATC 57.451 33.333 11.71 3.54 37.81 1.75
478 645 3.001736 GCCTGCTAATCTGTCGTCATTTC 59.998 47.826 0.00 0.00 0.00 2.17
479 646 4.437239 CCTGCTAATCTGTCGTCATTTCT 58.563 43.478 0.00 0.00 0.00 2.52
480 647 5.592054 CCTGCTAATCTGTCGTCATTTCTA 58.408 41.667 0.00 0.00 0.00 2.10
481 648 5.689514 CCTGCTAATCTGTCGTCATTTCTAG 59.310 44.000 0.00 0.00 0.00 2.43
503 670 1.376037 GGCACCAGAAGAGAACCGG 60.376 63.158 0.00 0.00 0.00 5.28
554 721 0.935194 GGAGGGGAGGTCTCTTCCTA 59.065 60.000 0.69 0.00 38.76 2.94
555 722 1.505977 GGAGGGGAGGTCTCTTCCTAT 59.494 57.143 0.69 0.00 38.76 2.57
590 785 0.036732 AACCAAGCGAGCAGAATGGA 59.963 50.000 13.39 0.00 35.86 3.41
597 792 3.084039 AGCGAGCAGAATGGAATCAAAA 58.916 40.909 0.00 0.00 35.86 2.44
599 794 3.733077 GCGAGCAGAATGGAATCAAAAGG 60.733 47.826 0.00 0.00 35.86 3.11
600 795 3.691118 CGAGCAGAATGGAATCAAAAGGA 59.309 43.478 0.00 0.00 35.86 3.36
601 796 4.337555 CGAGCAGAATGGAATCAAAAGGAT 59.662 41.667 0.00 0.00 34.97 3.24
602 797 5.528690 CGAGCAGAATGGAATCAAAAGGATA 59.471 40.000 0.00 0.00 32.86 2.59
603 798 6.512415 CGAGCAGAATGGAATCAAAAGGATAC 60.512 42.308 0.00 0.00 32.86 2.24
604 799 6.430007 AGCAGAATGGAATCAAAAGGATACT 58.570 36.000 0.00 0.00 45.48 2.12
605 800 6.545298 AGCAGAATGGAATCAAAAGGATACTC 59.455 38.462 0.00 0.00 42.75 2.59
606 801 6.545298 GCAGAATGGAATCAAAAGGATACTCT 59.455 38.462 0.00 0.00 42.75 3.24
654 849 3.885976 TCATTTTTGGGTGGGTACTGA 57.114 42.857 0.00 0.00 0.00 3.41
655 850 3.492337 TCATTTTTGGGTGGGTACTGAC 58.508 45.455 0.00 0.00 0.00 3.51
656 851 3.139397 TCATTTTTGGGTGGGTACTGACT 59.861 43.478 0.00 0.00 0.00 3.41
657 852 2.649531 TTTTGGGTGGGTACTGACTG 57.350 50.000 0.00 0.00 0.00 3.51
658 853 0.109723 TTTGGGTGGGTACTGACTGC 59.890 55.000 0.00 0.00 0.00 4.40
659 854 1.057275 TTGGGTGGGTACTGACTGCA 61.057 55.000 0.00 0.00 0.00 4.41
660 855 1.003718 GGGTGGGTACTGACTGCAC 60.004 63.158 0.00 0.00 0.00 4.57
662 857 0.324943 GGTGGGTACTGACTGCACAT 59.675 55.000 0.00 0.00 0.00 3.21
663 858 1.271379 GGTGGGTACTGACTGCACATT 60.271 52.381 0.00 0.00 0.00 2.71
670 868 2.771089 ACTGACTGCACATTACAGGTG 58.229 47.619 0.00 0.00 39.55 4.00
693 891 2.505118 GTGCTCGTCGTCCTCAGC 60.505 66.667 0.00 0.00 0.00 4.26
694 892 4.103103 TGCTCGTCGTCCTCAGCG 62.103 66.667 0.00 0.00 34.39 5.18
695 893 3.800863 GCTCGTCGTCCTCAGCGA 61.801 66.667 0.00 0.00 35.89 4.93
700 898 3.733960 TCGTCCTCAGCGACACGG 61.734 66.667 0.00 0.00 33.09 4.94
702 900 2.126424 GTCCTCAGCGACACGGAC 60.126 66.667 0.00 0.00 39.14 4.79
802 1328 0.464735 TGCTGCCACACGTTTAACCT 60.465 50.000 0.00 0.00 0.00 3.50
854 1392 1.047002 CTCTCTTCTCCCGCCATGAT 58.953 55.000 0.00 0.00 0.00 2.45
855 1393 1.415659 CTCTCTTCTCCCGCCATGATT 59.584 52.381 0.00 0.00 0.00 2.57
856 1394 1.139654 TCTCTTCTCCCGCCATGATTG 59.860 52.381 0.00 0.00 0.00 2.67
857 1395 0.464373 TCTTCTCCCGCCATGATTGC 60.464 55.000 0.00 0.00 0.00 3.56
858 1396 1.450531 CTTCTCCCGCCATGATTGCC 61.451 60.000 0.00 0.00 0.00 4.52
860 1398 1.895707 CTCCCGCCATGATTGCCTC 60.896 63.158 0.00 0.00 0.00 4.70
862 1400 2.514592 CCGCCATGATTGCCTCGT 60.515 61.111 0.00 0.00 0.00 4.18
863 1401 2.537560 CCGCCATGATTGCCTCGTC 61.538 63.158 0.00 0.00 0.00 4.20
864 1402 2.874694 CGCCATGATTGCCTCGTCG 61.875 63.158 0.00 0.00 0.00 5.12
865 1403 1.815421 GCCATGATTGCCTCGTCGT 60.815 57.895 0.00 0.00 0.00 4.34
866 1404 1.766143 GCCATGATTGCCTCGTCGTC 61.766 60.000 0.00 0.00 0.00 4.20
867 1405 0.460109 CCATGATTGCCTCGTCGTCA 60.460 55.000 0.00 0.00 0.00 4.35
868 1406 1.575244 CATGATTGCCTCGTCGTCAT 58.425 50.000 0.00 0.00 0.00 3.06
869 1407 1.524355 CATGATTGCCTCGTCGTCATC 59.476 52.381 0.00 0.00 0.00 2.92
870 1408 0.179111 TGATTGCCTCGTCGTCATCC 60.179 55.000 0.00 0.00 0.00 3.51
871 1409 0.876342 GATTGCCTCGTCGTCATCCC 60.876 60.000 0.00 0.00 0.00 3.85
872 1410 2.311688 ATTGCCTCGTCGTCATCCCC 62.312 60.000 0.00 0.00 0.00 4.81
889 1450 2.583441 CCCTTCGTGCTCTCCCACA 61.583 63.158 0.00 0.00 35.47 4.17
890 1451 1.374758 CCTTCGTGCTCTCCCACAC 60.375 63.158 0.00 0.00 35.47 3.82
891 1452 1.668294 CTTCGTGCTCTCCCACACT 59.332 57.895 0.00 0.00 35.47 3.55
907 1468 0.463204 CACTCCTCACGCTCCATGAT 59.537 55.000 0.00 0.00 0.00 2.45
927 1488 1.271001 TGGCATGATCGATCCATCCAC 60.271 52.381 22.31 8.62 0.00 4.02
928 1489 1.073964 GCATGATCGATCCATCCACG 58.926 55.000 22.31 0.00 0.00 4.94
929 1490 1.606480 GCATGATCGATCCATCCACGT 60.606 52.381 22.31 0.00 0.00 4.49
930 1491 2.332104 CATGATCGATCCATCCACGTC 58.668 52.381 22.31 0.00 0.00 4.34
932 1493 0.038159 GATCGATCCATCCACGTCCC 60.038 60.000 14.76 0.00 0.00 4.46
933 1494 0.759060 ATCGATCCATCCACGTCCCA 60.759 55.000 0.00 0.00 0.00 4.37
936 1497 2.644555 GATCCATCCACGTCCCACCG 62.645 65.000 0.00 0.00 0.00 4.94
937 1498 3.702048 CCATCCACGTCCCACCGT 61.702 66.667 0.00 0.00 42.87 4.83
957 1518 4.943508 GTGTCCGTATATAAACACGAGC 57.056 45.455 7.96 0.00 40.56 5.03
960 1521 3.005155 GTCCGTATATAAACACGAGCCCT 59.995 47.826 6.49 0.00 40.56 5.19
979 1540 2.279120 CCAGCTCCATCGCTCGAC 60.279 66.667 0.00 0.00 38.41 4.20
982 1543 2.130426 AGCTCCATCGCTCGACCAT 61.130 57.895 0.00 0.00 34.57 3.55
988 1549 0.597637 CATCGCTCGACCATACCCAC 60.598 60.000 0.00 0.00 0.00 4.61
989 1550 1.745320 ATCGCTCGACCATACCCACC 61.745 60.000 0.00 0.00 0.00 4.61
990 1551 2.717044 CGCTCGACCATACCCACCA 61.717 63.158 0.00 0.00 0.00 4.17
991 1552 1.830145 GCTCGACCATACCCACCAT 59.170 57.895 0.00 0.00 0.00 3.55
992 1553 1.045407 GCTCGACCATACCCACCATA 58.955 55.000 0.00 0.00 0.00 2.74
993 1554 1.623811 GCTCGACCATACCCACCATAT 59.376 52.381 0.00 0.00 0.00 1.78
994 1555 2.612972 GCTCGACCATACCCACCATATG 60.613 54.545 0.00 0.00 0.00 1.78
997 1558 2.104111 CGACCATACCCACCATATGTGT 59.896 50.000 1.24 0.00 43.85 3.72
999 1560 3.882888 GACCATACCCACCATATGTGTTG 59.117 47.826 1.24 0.00 43.85 3.33
1000 1561 3.525609 ACCATACCCACCATATGTGTTGA 59.474 43.478 1.24 0.00 43.85 3.18
1001 1562 4.167892 ACCATACCCACCATATGTGTTGAT 59.832 41.667 1.24 0.00 43.85 2.57
1002 1563 4.520111 CCATACCCACCATATGTGTTGATG 59.480 45.833 1.24 0.00 43.85 3.07
1003 1564 3.737559 ACCCACCATATGTGTTGATGT 57.262 42.857 1.24 0.00 43.85 3.06
1004 1565 3.620488 ACCCACCATATGTGTTGATGTC 58.380 45.455 1.24 0.00 43.85 3.06
1008 1569 3.309682 CACCATATGTGTTGATGTCGTCC 59.690 47.826 1.24 0.00 40.26 4.79
1013 1574 1.691976 TGTGTTGATGTCGTCCTCCTT 59.308 47.619 0.00 0.00 0.00 3.36
1157 1724 3.862991 GACCGCCCCCTTAGCCTC 61.863 72.222 0.00 0.00 0.00 4.70
1160 1727 3.551407 CGCCCCCTTAGCCTCCTC 61.551 72.222 0.00 0.00 0.00 3.71
1161 1728 3.172106 GCCCCCTTAGCCTCCTCC 61.172 72.222 0.00 0.00 0.00 4.30
1162 1729 2.844839 CCCCCTTAGCCTCCTCCG 60.845 72.222 0.00 0.00 0.00 4.63
1201 1771 1.328439 CAAGAACCTCTTCGTCGACG 58.672 55.000 31.30 31.30 33.78 5.12
1639 2295 2.159170 CCGTGATCTCCTCTTCTTGGTC 60.159 54.545 0.00 0.00 0.00 4.02
1645 2301 2.963101 TCTCCTCTTCTTGGTCAACGAA 59.037 45.455 0.00 0.00 0.00 3.85
1646 2302 3.386726 TCTCCTCTTCTTGGTCAACGAAA 59.613 43.478 0.00 0.00 0.00 3.46
1647 2303 4.040461 TCTCCTCTTCTTGGTCAACGAAAT 59.960 41.667 0.00 0.00 0.00 2.17
1648 2304 4.714632 TCCTCTTCTTGGTCAACGAAATT 58.285 39.130 0.00 0.00 0.00 1.82
1652 2308 6.308371 TCTTCTTGGTCAACGAAATTAACC 57.692 37.500 0.00 0.00 0.00 2.85
1670 2326 3.887621 ACCAGTTCGCTAGCTGATTTA 57.112 42.857 13.93 0.00 34.87 1.40
1671 2327 3.786635 ACCAGTTCGCTAGCTGATTTAG 58.213 45.455 13.93 0.00 34.87 1.85
1672 2328 3.447586 ACCAGTTCGCTAGCTGATTTAGA 59.552 43.478 13.93 0.00 34.87 2.10
1673 2329 4.081642 ACCAGTTCGCTAGCTGATTTAGAA 60.082 41.667 13.93 4.01 34.87 2.10
1851 2535 3.003480 AGCTTCTAAAGTTCATCGTGGC 58.997 45.455 0.00 0.00 0.00 5.01
1852 2536 2.742053 GCTTCTAAAGTTCATCGTGGCA 59.258 45.455 0.00 0.00 0.00 4.92
1996 2742 1.811860 GGTACGTACGCCATGTCCT 59.188 57.895 16.72 0.00 0.00 3.85
2035 2781 6.200854 CACGTAGCAAAGCATATCATCAACTA 59.799 38.462 0.00 0.00 0.00 2.24
2087 2856 9.413048 GGATATTTAGTTGTGCTCTATAGTGTC 57.587 37.037 0.00 0.00 0.00 3.67
2090 2859 4.116747 AGTTGTGCTCTATAGTGTCTGC 57.883 45.455 0.00 0.00 0.00 4.26
2232 3049 2.274232 TATCGTCCCGTTCGTGGCTG 62.274 60.000 0.00 0.00 0.00 4.85
2248 3065 0.742990 GCTGGCACATTGGCTACGTA 60.743 55.000 0.00 0.00 44.10 3.57
2312 3137 4.826274 AATGATATGATACTCCCACCGG 57.174 45.455 0.00 0.00 0.00 5.28
2327 3152 0.179001 ACCGGCCCTTATTACATGGC 60.179 55.000 0.00 0.00 43.26 4.40
2360 3185 9.253275 GTTTTGCGTGATTCAATTTTAATCATG 57.747 29.630 19.40 19.40 46.29 3.07
2386 3212 9.654663 GTATTTCACATACAATATACTCCCTCC 57.345 37.037 0.00 0.00 0.00 4.30
2387 3213 5.977489 TCACATACAATATACTCCCTCCG 57.023 43.478 0.00 0.00 0.00 4.63
2388 3214 5.637127 TCACATACAATATACTCCCTCCGA 58.363 41.667 0.00 0.00 0.00 4.55
2389 3215 5.475909 TCACATACAATATACTCCCTCCGAC 59.524 44.000 0.00 0.00 0.00 4.79
2390 3216 4.771054 ACATACAATATACTCCCTCCGACC 59.229 45.833 0.00 0.00 0.00 4.79
2391 3217 2.606378 ACAATATACTCCCTCCGACCC 58.394 52.381 0.00 0.00 0.00 4.46
2392 3218 2.090943 ACAATATACTCCCTCCGACCCA 60.091 50.000 0.00 0.00 0.00 4.51
2393 3219 2.969950 CAATATACTCCCTCCGACCCAA 59.030 50.000 0.00 0.00 0.00 4.12
2394 3220 2.852714 TATACTCCCTCCGACCCAAA 57.147 50.000 0.00 0.00 0.00 3.28
2395 3221 1.961133 ATACTCCCTCCGACCCAAAA 58.039 50.000 0.00 0.00 0.00 2.44
2396 3222 1.961133 TACTCCCTCCGACCCAAAAT 58.039 50.000 0.00 0.00 0.00 1.82
2397 3223 1.961133 ACTCCCTCCGACCCAAAATA 58.039 50.000 0.00 0.00 0.00 1.40
2398 3224 2.271777 ACTCCCTCCGACCCAAAATAA 58.728 47.619 0.00 0.00 0.00 1.40
2399 3225 2.238898 ACTCCCTCCGACCCAAAATAAG 59.761 50.000 0.00 0.00 0.00 1.73
2400 3226 2.238898 CTCCCTCCGACCCAAAATAAGT 59.761 50.000 0.00 0.00 0.00 2.24
2401 3227 2.026636 TCCCTCCGACCCAAAATAAGTG 60.027 50.000 0.00 0.00 0.00 3.16
2402 3228 2.290705 CCCTCCGACCCAAAATAAGTGT 60.291 50.000 0.00 0.00 0.00 3.55
2403 3229 3.007635 CCTCCGACCCAAAATAAGTGTC 58.992 50.000 0.00 0.00 0.00 3.67
2404 3230 3.307480 CCTCCGACCCAAAATAAGTGTCT 60.307 47.826 0.00 0.00 0.00 3.41
2405 3231 3.933332 CTCCGACCCAAAATAAGTGTCTC 59.067 47.826 0.00 0.00 0.00 3.36
2406 3232 3.325425 TCCGACCCAAAATAAGTGTCTCA 59.675 43.478 0.00 0.00 0.00 3.27
2407 3233 4.069304 CCGACCCAAAATAAGTGTCTCAA 58.931 43.478 0.00 0.00 0.00 3.02
2408 3234 4.154195 CCGACCCAAAATAAGTGTCTCAAG 59.846 45.833 0.00 0.00 0.00 3.02
2409 3235 4.378459 CGACCCAAAATAAGTGTCTCAAGC 60.378 45.833 0.00 0.00 0.00 4.01
2410 3236 4.729868 ACCCAAAATAAGTGTCTCAAGCT 58.270 39.130 0.00 0.00 0.00 3.74
2411 3237 5.140454 ACCCAAAATAAGTGTCTCAAGCTT 58.860 37.500 0.00 0.00 0.00 3.74
2412 3238 6.303839 ACCCAAAATAAGTGTCTCAAGCTTA 58.696 36.000 0.00 0.00 0.00 3.09
2413 3239 6.775629 ACCCAAAATAAGTGTCTCAAGCTTAA 59.224 34.615 0.00 0.00 0.00 1.85
2414 3240 7.451566 ACCCAAAATAAGTGTCTCAAGCTTAAT 59.548 33.333 0.00 0.00 0.00 1.40
2415 3241 8.956426 CCCAAAATAAGTGTCTCAAGCTTAATA 58.044 33.333 0.00 0.00 0.00 0.98
2416 3242 9.774742 CCAAAATAAGTGTCTCAAGCTTAATAC 57.225 33.333 0.00 0.00 0.00 1.89
2430 3256 9.745880 TCAAGCTTAATACTTATTTAGAGACGG 57.254 33.333 0.00 0.00 0.00 4.79
2431 3257 9.745880 CAAGCTTAATACTTATTTAGAGACGGA 57.254 33.333 0.00 0.00 0.00 4.69
2432 3258 9.968870 AAGCTTAATACTTATTTAGAGACGGAG 57.031 33.333 0.00 0.00 0.00 4.63
2433 3259 8.578151 AGCTTAATACTTATTTAGAGACGGAGG 58.422 37.037 0.25 0.00 0.00 4.30
2434 3260 7.813627 GCTTAATACTTATTTAGAGACGGAGGG 59.186 40.741 0.25 0.00 0.00 4.30
2435 3261 9.075678 CTTAATACTTATTTAGAGACGGAGGGA 57.924 37.037 0.00 0.00 0.00 4.20
2436 3262 7.527568 AATACTTATTTAGAGACGGAGGGAG 57.472 40.000 0.00 0.00 0.00 4.30
2437 3263 4.869451 ACTTATTTAGAGACGGAGGGAGT 58.131 43.478 0.00 0.00 0.00 3.85
2438 3264 6.011122 ACTTATTTAGAGACGGAGGGAGTA 57.989 41.667 0.00 0.00 0.00 2.59
2439 3265 6.612741 ACTTATTTAGAGACGGAGGGAGTAT 58.387 40.000 0.00 0.00 0.00 2.12
2440 3266 6.716173 ACTTATTTAGAGACGGAGGGAGTATC 59.284 42.308 0.00 0.00 0.00 2.24
2441 3267 4.515028 TTTAGAGACGGAGGGAGTATCA 57.485 45.455 0.00 0.00 36.25 2.15
2442 3268 4.515028 TTAGAGACGGAGGGAGTATCAA 57.485 45.455 0.00 0.00 36.25 2.57
2443 3269 2.938838 AGAGACGGAGGGAGTATCAAG 58.061 52.381 0.00 0.00 36.25 3.02
2444 3270 2.242708 AGAGACGGAGGGAGTATCAAGT 59.757 50.000 0.00 0.00 36.25 3.16
2448 3274 4.411540 AGACGGAGGGAGTATCAAGTAGTA 59.588 45.833 0.00 0.00 36.25 1.82
2483 3312 6.934561 AATTACCACTACGTTCGAAACTAC 57.065 37.500 0.00 0.00 0.00 2.73
2487 3316 3.496155 CACTACGTTCGAAACTACTCCC 58.504 50.000 0.00 0.00 0.00 4.30
2490 3319 1.198637 ACGTTCGAAACTACTCCCTCG 59.801 52.381 0.00 0.00 0.00 4.63
2495 3324 1.542915 CGAAACTACTCCCTCGGTTCA 59.457 52.381 0.00 0.00 0.00 3.18
2498 3327 2.305858 ACTACTCCCTCGGTTCACTT 57.694 50.000 0.00 0.00 0.00 3.16
2502 3331 3.397849 ACTCCCTCGGTTCACTTTTAC 57.602 47.619 0.00 0.00 0.00 2.01
2504 3333 3.064931 CTCCCTCGGTTCACTTTTACAC 58.935 50.000 0.00 0.00 0.00 2.90
2509 3338 3.061322 TCGGTTCACTTTTACACGATGG 58.939 45.455 0.00 0.00 0.00 3.51
2576 3405 5.739161 GTGTGTTTGTTCACTCATTTCAGTC 59.261 40.000 0.00 0.00 38.90 3.51
2577 3406 5.647658 TGTGTTTGTTCACTCATTTCAGTCT 59.352 36.000 0.00 0.00 38.90 3.24
2579 3408 4.818534 TTGTTCACTCATTTCAGTCTGC 57.181 40.909 0.00 0.00 0.00 4.26
2638 3479 8.922058 TTATTGTGAATAGAAGGAGTACGAAC 57.078 34.615 0.00 0.00 0.00 3.95
2640 3481 4.456911 TGTGAATAGAAGGAGTACGAACGT 59.543 41.667 5.03 5.03 0.00 3.99
2729 3615 4.021719 CGTAGACAAAGGGAGTTCCACTAA 60.022 45.833 0.00 0.00 38.24 2.24
2730 3616 4.353383 AGACAAAGGGAGTTCCACTAAC 57.647 45.455 0.00 0.00 38.24 2.34
2731 3617 3.714798 AGACAAAGGGAGTTCCACTAACA 59.285 43.478 0.00 0.00 40.83 2.41
2732 3618 4.351111 AGACAAAGGGAGTTCCACTAACAT 59.649 41.667 0.00 0.00 40.83 2.71
2733 3619 4.398319 ACAAAGGGAGTTCCACTAACATG 58.602 43.478 0.00 0.00 40.83 3.21
2734 3620 3.721087 AAGGGAGTTCCACTAACATGG 57.279 47.619 0.00 0.00 40.83 3.66
2735 3621 1.282157 AGGGAGTTCCACTAACATGGC 59.718 52.381 0.00 0.00 40.83 4.40
2761 3647 7.484007 CAGTACTATTTTATATACGACGGCAGG 59.516 40.741 0.00 0.00 0.00 4.85
2803 3818 4.576463 ACAACCAAGCACAAAAACAACAAA 59.424 33.333 0.00 0.00 0.00 2.83
2823 3838 3.609103 AAACAGCTTGACGACATCAAC 57.391 42.857 0.00 0.00 42.62 3.18
2829 3844 2.924290 GCTTGACGACATCAACTACTCC 59.076 50.000 0.00 0.00 42.62 3.85
3444 4636 1.134901 CAGCTCGTTACGTCGCTCT 59.865 57.895 17.57 2.40 34.17 4.09
3562 4754 7.095017 GGAAAAGGTAGAAGAACATCACTGAAG 60.095 40.741 0.00 0.00 0.00 3.02
3608 4800 4.628333 CCGGATGTCATTTTAGTGTAACGT 59.372 41.667 0.00 0.00 45.86 3.99
3614 4806 7.304919 TGTCATTTTAGTGTAACGTTTCACA 57.695 32.000 31.19 18.12 45.86 3.58
3652 4851 3.324930 CCAGAGCCTGGTGCCTGA 61.325 66.667 11.85 0.00 45.82 3.86
3682 4888 1.967779 TGGGTCGATCTCAAGTGACAA 59.032 47.619 0.00 0.00 33.04 3.18
3690 4896 6.367422 GTCGATCTCAAGTGACAATTTCTCTT 59.633 38.462 0.00 0.00 38.36 2.85
3710 4916 6.205464 TCTCTTCTTGGCATCTTTAACTTGTG 59.795 38.462 0.00 0.00 0.00 3.33
3726 4932 2.145397 TGTGTAAGGGCAACACCAAA 57.855 45.000 12.54 0.00 45.33 3.28
3732 4938 2.841988 GGCAACACCAAAGGGCCA 60.842 61.111 6.18 0.00 44.01 5.36
3756 4962 3.125316 CCTAAACGGATGCAGAAAGTGTC 59.875 47.826 0.00 0.00 33.16 3.67
3757 4963 1.523758 AACGGATGCAGAAAGTGTCC 58.476 50.000 0.00 0.00 0.00 4.02
3787 4993 4.202451 TGTCCATTTGAATGACAGACAGGA 60.202 41.667 5.32 0.00 38.70 3.86
3792 4998 1.546029 TGAATGACAGACAGGAGTCCG 59.454 52.381 2.76 1.29 46.15 4.79
3793 4999 0.898320 AATGACAGACAGGAGTCCGG 59.102 55.000 7.88 7.88 46.15 5.14
3798 5004 1.841556 AGACAGGAGTCCGGCCAAA 60.842 57.895 9.48 0.00 46.15 3.28
3817 5023 2.260639 AGAGGAATTGGAGAGCCTGA 57.739 50.000 0.00 0.00 34.31 3.86
3825 5031 5.011023 GGAATTGGAGAGCCTGAAAGAAAAA 59.989 40.000 0.00 0.00 34.07 1.94
3835 5041 4.452455 GCCTGAAAGAAAAACTCGATCTGA 59.548 41.667 0.00 0.00 34.07 3.27
3858 5064 8.853077 TGATAATGATTGATCAATGGAGTACC 57.147 34.615 25.37 9.57 40.69 3.34
3866 5072 5.137551 TGATCAATGGAGTACCGATGAGTA 58.862 41.667 0.00 0.00 37.01 2.59
3869 5075 4.579340 TCAATGGAGTACCGATGAGTAGAC 59.421 45.833 0.00 0.00 39.42 2.59
3920 5279 6.760770 TCAAGGCAAGGAAATTTTACAAGTTG 59.239 34.615 0.00 0.00 0.00 3.16
3921 5280 6.233905 AGGCAAGGAAATTTTACAAGTTGT 57.766 33.333 14.05 14.05 0.00 3.32
3922 5281 7.354751 AGGCAAGGAAATTTTACAAGTTGTA 57.645 32.000 11.75 11.75 0.00 2.41
3923 5282 7.207383 AGGCAAGGAAATTTTACAAGTTGTAC 58.793 34.615 15.31 3.15 31.69 2.90
3924 5283 7.069455 AGGCAAGGAAATTTTACAAGTTGTACT 59.931 33.333 15.31 4.90 31.69 2.73
3925 5284 7.381408 GGCAAGGAAATTTTACAAGTTGTACTC 59.619 37.037 15.31 7.29 31.69 2.59
3926 5285 7.381408 GCAAGGAAATTTTACAAGTTGTACTCC 59.619 37.037 15.31 14.50 31.69 3.85
3927 5286 7.520451 AGGAAATTTTACAAGTTGTACTCCC 57.480 36.000 15.31 10.47 31.69 4.30
3928 5287 7.295340 AGGAAATTTTACAAGTTGTACTCCCT 58.705 34.615 15.31 12.25 31.69 4.20
3929 5288 7.447545 AGGAAATTTTACAAGTTGTACTCCCTC 59.552 37.037 15.31 9.44 31.69 4.30
3930 5289 7.309012 GGAAATTTTACAAGTTGTACTCCCTCC 60.309 40.741 15.31 13.93 31.69 4.30
3931 5290 3.947910 TTACAAGTTGTACTCCCTCCG 57.052 47.619 15.31 0.00 31.69 4.63
3932 5291 1.713297 ACAAGTTGTACTCCCTCCGT 58.287 50.000 6.75 0.00 0.00 4.69
3933 5292 2.880443 ACAAGTTGTACTCCCTCCGTA 58.120 47.619 6.75 0.00 0.00 4.02
3934 5293 3.233507 ACAAGTTGTACTCCCTCCGTAA 58.766 45.455 6.75 0.00 0.00 3.18
3935 5294 3.642848 ACAAGTTGTACTCCCTCCGTAAA 59.357 43.478 6.75 0.00 0.00 2.01
3936 5295 3.949842 AGTTGTACTCCCTCCGTAAAC 57.050 47.619 0.00 0.00 0.00 2.01
3937 5296 3.233507 AGTTGTACTCCCTCCGTAAACA 58.766 45.455 0.00 0.00 0.00 2.83
3938 5297 3.642848 AGTTGTACTCCCTCCGTAAACAA 59.357 43.478 0.00 0.00 0.00 2.83
3939 5298 4.101430 AGTTGTACTCCCTCCGTAAACAAA 59.899 41.667 0.00 0.00 0.00 2.83
3940 5299 4.895668 TGTACTCCCTCCGTAAACAAAT 57.104 40.909 0.00 0.00 0.00 2.32
3941 5300 5.999205 TGTACTCCCTCCGTAAACAAATA 57.001 39.130 0.00 0.00 0.00 1.40
3942 5301 6.549433 TGTACTCCCTCCGTAAACAAATAT 57.451 37.500 0.00 0.00 0.00 1.28
3943 5302 7.658525 TGTACTCCCTCCGTAAACAAATATA 57.341 36.000 0.00 0.00 0.00 0.86
3944 5303 8.076910 TGTACTCCCTCCGTAAACAAATATAA 57.923 34.615 0.00 0.00 0.00 0.98
3945 5304 8.199449 TGTACTCCCTCCGTAAACAAATATAAG 58.801 37.037 0.00 0.00 0.00 1.73
3946 5305 7.427989 ACTCCCTCCGTAAACAAATATAAGA 57.572 36.000 0.00 0.00 0.00 2.10
3947 5306 8.030913 ACTCCCTCCGTAAACAAATATAAGAT 57.969 34.615 0.00 0.00 0.00 2.40
3948 5307 8.148999 ACTCCCTCCGTAAACAAATATAAGATC 58.851 37.037 0.00 0.00 0.00 2.75
3949 5308 8.025270 TCCCTCCGTAAACAAATATAAGATCA 57.975 34.615 0.00 0.00 0.00 2.92
3950 5309 8.656806 TCCCTCCGTAAACAAATATAAGATCAT 58.343 33.333 0.00 0.00 0.00 2.45
3951 5310 9.284968 CCCTCCGTAAACAAATATAAGATCATT 57.715 33.333 0.00 0.00 0.00 2.57
3989 5348 8.684973 TTAGTGATCTAAAGTTCTAAACGCTC 57.315 34.615 0.00 0.00 33.79 5.03
3990 5349 6.926313 AGTGATCTAAAGTTCTAAACGCTCT 58.074 36.000 0.00 0.00 36.23 4.09
3991 5350 7.379750 AGTGATCTAAAGTTCTAAACGCTCTT 58.620 34.615 0.00 0.00 36.23 2.85
3992 5351 8.521176 AGTGATCTAAAGTTCTAAACGCTCTTA 58.479 33.333 0.00 0.00 36.23 2.10
3993 5352 9.303537 GTGATCTAAAGTTCTAAACGCTCTTAT 57.696 33.333 0.00 0.00 36.23 1.73
4008 5367 8.649973 AACGCTCTTATATTTCTTTACAGAGG 57.350 34.615 0.00 0.00 0.00 3.69
4009 5368 7.210873 ACGCTCTTATATTTCTTTACAGAGGG 58.789 38.462 8.36 8.36 42.53 4.30
4010 5369 7.069578 ACGCTCTTATATTTCTTTACAGAGGGA 59.930 37.037 14.96 0.00 40.49 4.20
4011 5370 7.596995 CGCTCTTATATTTCTTTACAGAGGGAG 59.403 40.741 4.76 0.00 40.49 4.30
4029 5388 8.722394 CAGAGGGAGTACTTCAGAAATTTAAAC 58.278 37.037 2.92 0.00 0.00 2.01
4042 5401 7.562088 TCAGAAATTTAAACCACCCAAAGTACT 59.438 33.333 0.00 0.00 0.00 2.73
4043 5402 7.865889 CAGAAATTTAAACCACCCAAAGTACTC 59.134 37.037 0.00 0.00 0.00 2.59
4045 5404 4.792513 TTAAACCACCCAAAGTACTCCA 57.207 40.909 0.00 0.00 0.00 3.86
4046 5405 3.673543 AAACCACCCAAAGTACTCCAA 57.326 42.857 0.00 0.00 0.00 3.53
4047 5406 3.673543 AACCACCCAAAGTACTCCAAA 57.326 42.857 0.00 0.00 0.00 3.28
4058 5417 7.368059 CCAAAGTACTCCAAAACTATGGTTTC 58.632 38.462 7.72 0.00 43.90 2.78
4069 5428 7.489757 CCAAAACTATGGTTTCGAAGACAAAAA 59.510 33.333 7.72 0.00 43.90 1.94
4088 5447 4.942761 AAAGCATGATGAAACACAAGGT 57.057 36.364 0.00 0.00 0.00 3.50
4099 5458 2.689553 ACACAAGGTTTTTGCTTGGG 57.310 45.000 0.00 0.00 37.50 4.12
4218 5745 4.579869 TCCTTAGAGACAAACAAGCATCC 58.420 43.478 0.00 0.00 0.00 3.51
4256 5783 4.944962 TTCAGTATTGAATGCTGGAACG 57.055 40.909 20.45 0.00 42.36 3.95
4316 5843 2.626743 GAGATGATGGAATTGGCCCAAG 59.373 50.000 1.16 0.00 37.22 3.61
4328 5856 2.492773 GCCCAAGGGAATGGCATCG 61.493 63.158 9.92 0.00 44.70 3.84
4466 6264 2.102252 CTGACCTAGACATCCTCAAGCC 59.898 54.545 0.00 0.00 0.00 4.35
4489 6287 3.406764 AGAGTAAAACCAGAGCTTGCTG 58.593 45.455 0.00 0.00 35.66 4.41
4501 6299 3.765511 AGAGCTTGCTGAATTTATTGGCA 59.234 39.130 0.00 0.00 0.00 4.92
4505 6303 5.941647 AGCTTGCTGAATTTATTGGCAATTT 59.058 32.000 19.21 6.69 41.12 1.82
4519 6317 6.906157 TTGGCAATTTCATCTCTTCTTTCT 57.094 33.333 0.00 0.00 0.00 2.52
4520 6318 8.585471 ATTGGCAATTTCATCTCTTCTTTCTA 57.415 30.769 6.96 0.00 0.00 2.10
4521 6319 7.621428 TGGCAATTTCATCTCTTCTTTCTAG 57.379 36.000 0.00 0.00 0.00 2.43
4522 6320 6.600822 TGGCAATTTCATCTCTTCTTTCTAGG 59.399 38.462 0.00 0.00 0.00 3.02
4523 6321 6.825721 GGCAATTTCATCTCTTCTTTCTAGGA 59.174 38.462 0.00 0.00 0.00 2.94
4524 6322 7.501892 GGCAATTTCATCTCTTCTTTCTAGGAT 59.498 37.037 0.00 0.00 0.00 3.24
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.829948 CAATGTGGCAAGTCTTCATCAC 58.170 45.455 0.00 0.00 0.00 3.06
1 2 2.229543 GCAATGTGGCAAGTCTTCATCA 59.770 45.455 0.00 0.00 0.00 3.07
2 3 2.490903 AGCAATGTGGCAAGTCTTCATC 59.509 45.455 0.00 0.00 35.83 2.92
3 4 2.522185 AGCAATGTGGCAAGTCTTCAT 58.478 42.857 0.00 0.00 35.83 2.57
4 5 1.985473 AGCAATGTGGCAAGTCTTCA 58.015 45.000 0.00 0.00 35.83 3.02
5 6 3.671702 GCTAAGCAATGTGGCAAGTCTTC 60.672 47.826 0.00 0.00 35.83 2.87
7 8 1.815003 GCTAAGCAATGTGGCAAGTCT 59.185 47.619 0.00 0.00 35.83 3.24
8 9 1.815003 AGCTAAGCAATGTGGCAAGTC 59.185 47.619 0.00 0.00 35.83 3.01
9 10 1.542915 CAGCTAAGCAATGTGGCAAGT 59.457 47.619 0.00 0.00 35.83 3.16
10 11 1.814394 TCAGCTAAGCAATGTGGCAAG 59.186 47.619 0.00 0.00 35.83 4.01
11 12 1.908344 TCAGCTAAGCAATGTGGCAA 58.092 45.000 0.00 0.00 35.83 4.52
12 13 1.908344 TTCAGCTAAGCAATGTGGCA 58.092 45.000 0.00 0.00 35.83 4.92
14 15 3.755378 AGAGTTTCAGCTAAGCAATGTGG 59.245 43.478 0.00 0.00 0.00 4.17
15 16 4.214971 ACAGAGTTTCAGCTAAGCAATGTG 59.785 41.667 0.00 0.00 0.00 3.21
16 17 4.392940 ACAGAGTTTCAGCTAAGCAATGT 58.607 39.130 0.00 0.00 0.00 2.71
17 18 5.368256 AACAGAGTTTCAGCTAAGCAATG 57.632 39.130 0.00 0.00 0.00 2.82
18 19 5.767168 AGAAACAGAGTTTCAGCTAAGCAAT 59.233 36.000 20.71 0.00 0.00 3.56
19 20 5.126067 AGAAACAGAGTTTCAGCTAAGCAA 58.874 37.500 20.71 0.00 0.00 3.91
20 21 4.708177 AGAAACAGAGTTTCAGCTAAGCA 58.292 39.130 20.71 0.00 0.00 3.91
21 22 5.681337 AAGAAACAGAGTTTCAGCTAAGC 57.319 39.130 20.71 0.00 0.00 3.09
22 23 7.970614 ACAAAAAGAAACAGAGTTTCAGCTAAG 59.029 33.333 20.71 10.59 0.00 2.18
23 24 7.826690 ACAAAAAGAAACAGAGTTTCAGCTAA 58.173 30.769 20.71 0.00 0.00 3.09
24 25 7.391148 ACAAAAAGAAACAGAGTTTCAGCTA 57.609 32.000 20.71 0.00 0.00 3.32
25 26 6.272822 ACAAAAAGAAACAGAGTTTCAGCT 57.727 33.333 20.71 5.94 0.00 4.24
26 27 6.951256 AACAAAAAGAAACAGAGTTTCAGC 57.049 33.333 20.71 0.00 0.00 4.26
27 28 8.947940 CGATAACAAAAAGAAACAGAGTTTCAG 58.052 33.333 20.71 9.92 0.00 3.02
28 29 8.455682 ACGATAACAAAAAGAAACAGAGTTTCA 58.544 29.630 20.71 2.47 0.00 2.69
29 30 8.836959 ACGATAACAAAAAGAAACAGAGTTTC 57.163 30.769 13.24 13.24 0.00 2.78
30 31 7.638683 CGACGATAACAAAAAGAAACAGAGTTT 59.361 33.333 0.00 0.00 0.00 2.66
31 32 7.123830 CGACGATAACAAAAAGAAACAGAGTT 58.876 34.615 0.00 0.00 0.00 3.01
32 33 6.292703 CCGACGATAACAAAAAGAAACAGAGT 60.293 38.462 0.00 0.00 0.00 3.24
33 34 6.071463 CCGACGATAACAAAAAGAAACAGAG 58.929 40.000 0.00 0.00 0.00 3.35
34 35 5.754406 TCCGACGATAACAAAAAGAAACAGA 59.246 36.000 0.00 0.00 0.00 3.41
35 36 5.981174 TCCGACGATAACAAAAAGAAACAG 58.019 37.500 0.00 0.00 0.00 3.16
36 37 5.754406 TCTCCGACGATAACAAAAAGAAACA 59.246 36.000 0.00 0.00 0.00 2.83
37 38 6.219302 TCTCCGACGATAACAAAAAGAAAC 57.781 37.500 0.00 0.00 0.00 2.78
38 39 7.816031 AGTATCTCCGACGATAACAAAAAGAAA 59.184 33.333 0.00 0.00 0.00 2.52
39 40 7.318141 AGTATCTCCGACGATAACAAAAAGAA 58.682 34.615 0.00 0.00 0.00 2.52
40 41 6.860080 AGTATCTCCGACGATAACAAAAAGA 58.140 36.000 0.00 0.00 0.00 2.52
41 42 6.198591 GGAGTATCTCCGACGATAACAAAAAG 59.801 42.308 0.00 0.00 41.08 2.27
42 43 6.038356 GGAGTATCTCCGACGATAACAAAAA 58.962 40.000 0.00 0.00 41.08 1.94
43 44 5.585390 GGAGTATCTCCGACGATAACAAAA 58.415 41.667 0.00 0.00 41.08 2.44
44 45 5.179045 GGAGTATCTCCGACGATAACAAA 57.821 43.478 0.00 0.00 41.08 2.83
45 46 4.825546 GGAGTATCTCCGACGATAACAA 57.174 45.455 0.00 0.00 41.08 2.83
57 58 5.957842 ATGATGAGACGAAGGAGTATCTC 57.042 43.478 0.00 0.00 38.46 2.75
58 59 9.693739 ATATTATGATGAGACGAAGGAGTATCT 57.306 33.333 0.00 0.00 33.84 1.98
62 63 9.521841 TCTTATATTATGATGAGACGAAGGAGT 57.478 33.333 0.00 0.00 0.00 3.85
64 65 9.521841 ACTCTTATATTATGATGAGACGAAGGA 57.478 33.333 0.00 0.00 0.00 3.36
81 82 8.889717 CCAACCGTGTCAAAAATACTCTTATAT 58.110 33.333 0.00 0.00 0.00 0.86
82 83 7.334921 CCCAACCGTGTCAAAAATACTCTTATA 59.665 37.037 0.00 0.00 0.00 0.98
83 84 6.150474 CCCAACCGTGTCAAAAATACTCTTAT 59.850 38.462 0.00 0.00 0.00 1.73
84 85 5.470777 CCCAACCGTGTCAAAAATACTCTTA 59.529 40.000 0.00 0.00 0.00 2.10
85 86 4.277423 CCCAACCGTGTCAAAAATACTCTT 59.723 41.667 0.00 0.00 0.00 2.85
86 87 3.818773 CCCAACCGTGTCAAAAATACTCT 59.181 43.478 0.00 0.00 0.00 3.24
87 88 3.057806 CCCCAACCGTGTCAAAAATACTC 60.058 47.826 0.00 0.00 0.00 2.59
88 89 2.888414 CCCCAACCGTGTCAAAAATACT 59.112 45.455 0.00 0.00 0.00 2.12
89 90 2.608506 GCCCCAACCGTGTCAAAAATAC 60.609 50.000 0.00 0.00 0.00 1.89
90 91 1.614413 GCCCCAACCGTGTCAAAAATA 59.386 47.619 0.00 0.00 0.00 1.40
91 92 0.391228 GCCCCAACCGTGTCAAAAAT 59.609 50.000 0.00 0.00 0.00 1.82
92 93 0.684805 AGCCCCAACCGTGTCAAAAA 60.685 50.000 0.00 0.00 0.00 1.94
93 94 0.684805 AAGCCCCAACCGTGTCAAAA 60.685 50.000 0.00 0.00 0.00 2.44
94 95 1.076632 AAGCCCCAACCGTGTCAAA 60.077 52.632 0.00 0.00 0.00 2.69
95 96 1.826054 CAAGCCCCAACCGTGTCAA 60.826 57.895 0.00 0.00 0.00 3.18
96 97 2.203280 CAAGCCCCAACCGTGTCA 60.203 61.111 0.00 0.00 0.00 3.58
97 98 2.203294 ACAAGCCCCAACCGTGTC 60.203 61.111 0.00 0.00 0.00 3.67
98 99 2.518349 CACAAGCCCCAACCGTGT 60.518 61.111 0.00 0.00 0.00 4.49
99 100 3.294493 CCACAAGCCCCAACCGTG 61.294 66.667 0.00 0.00 0.00 4.94
100 101 4.596585 CCCACAAGCCCCAACCGT 62.597 66.667 0.00 0.00 0.00 4.83
101 102 4.596585 ACCCACAAGCCCCAACCG 62.597 66.667 0.00 0.00 0.00 4.44
102 103 2.600470 GACCCACAAGCCCCAACC 60.600 66.667 0.00 0.00 0.00 3.77
103 104 2.600470 GGACCCACAAGCCCCAAC 60.600 66.667 0.00 0.00 0.00 3.77
104 105 3.106609 TGGACCCACAAGCCCCAA 61.107 61.111 0.00 0.00 0.00 4.12
105 106 3.897122 GTGGACCCACAAGCCCCA 61.897 66.667 13.92 0.00 45.53 4.96
117 118 0.537143 TCATTGGCACCACTGTGGAC 60.537 55.000 32.30 21.99 40.96 4.02
120 121 1.614903 ACATTCATTGGCACCACTGTG 59.385 47.619 6.88 0.00 45.65 3.66
161 162 6.145696 CACAAGTTGCTAGTACTAGGACAAAC 59.854 42.308 27.24 20.17 33.17 2.93
284 403 1.107945 CCTTCCTCCCGTCTTCTCTC 58.892 60.000 0.00 0.00 0.00 3.20
300 419 2.197643 GACGACCGACGAGCTTCCTT 62.198 60.000 0.00 0.00 45.77 3.36
314 433 0.385223 CAGCAAGCAAGCAAGACGAC 60.385 55.000 3.19 0.00 36.85 4.34
315 434 0.815213 ACAGCAAGCAAGCAAGACGA 60.815 50.000 3.19 0.00 36.85 4.20
316 435 0.867746 TACAGCAAGCAAGCAAGACG 59.132 50.000 3.19 0.00 36.85 4.18
317 436 1.198637 CCTACAGCAAGCAAGCAAGAC 59.801 52.381 3.19 0.00 36.85 3.01
319 438 0.524862 CCCTACAGCAAGCAAGCAAG 59.475 55.000 3.19 0.00 36.85 4.01
320 439 0.895100 CCCCTACAGCAAGCAAGCAA 60.895 55.000 3.19 0.00 36.85 3.91
364 513 1.522668 CAACCGCAGAATGAAGGTGA 58.477 50.000 0.00 0.00 45.56 4.02
434 592 8.874816 CAGGCTAAGTAGTATTTTTCTTCTCAC 58.125 37.037 0.00 0.00 0.00 3.51
435 593 7.549488 GCAGGCTAAGTAGTATTTTTCTTCTCA 59.451 37.037 0.00 0.00 0.00 3.27
466 631 3.181486 TGCCTAGCTAGAAATGACGACAG 60.181 47.826 22.70 1.74 0.00 3.51
478 645 2.660572 TCTCTTCTGGTGCCTAGCTAG 58.339 52.381 14.20 14.20 0.00 3.42
479 646 2.761208 GTTCTCTTCTGGTGCCTAGCTA 59.239 50.000 0.00 0.00 0.00 3.32
480 647 1.552792 GTTCTCTTCTGGTGCCTAGCT 59.447 52.381 0.00 0.00 0.00 3.32
481 648 1.406205 GGTTCTCTTCTGGTGCCTAGC 60.406 57.143 0.00 0.00 0.00 3.42
590 785 9.649316 AGCTAGTAGTAGAGTATCCTTTTGATT 57.351 33.333 8.87 0.00 34.76 2.57
620 815 9.874205 CACCCAAAAATGATGACATTACTATTT 57.126 29.630 0.00 0.00 44.67 1.40
621 816 8.477256 CCACCCAAAAATGATGACATTACTATT 58.523 33.333 0.00 0.00 44.67 1.73
624 819 5.187576 CCCACCCAAAAATGATGACATTACT 59.812 40.000 0.00 0.00 44.67 2.24
626 821 5.090139 ACCCACCCAAAAATGATGACATTA 58.910 37.500 0.00 0.00 44.67 1.90
627 822 3.909364 ACCCACCCAAAAATGATGACATT 59.091 39.130 0.00 0.00 46.99 2.71
631 826 4.085733 CAGTACCCACCCAAAAATGATGA 58.914 43.478 0.00 0.00 0.00 2.92
635 830 3.255642 CAGTCAGTACCCACCCAAAAATG 59.744 47.826 0.00 0.00 0.00 2.32
658 853 1.388768 CACGTACGCACCTGTAATGTG 59.611 52.381 16.72 0.00 35.41 3.21
659 854 1.705256 CACGTACGCACCTGTAATGT 58.295 50.000 16.72 0.00 0.00 2.71
660 855 0.368907 GCACGTACGCACCTGTAATG 59.631 55.000 16.72 3.66 0.00 1.90
662 857 0.387622 GAGCACGTACGCACCTGTAA 60.388 55.000 16.72 0.00 0.00 2.41
663 858 1.210931 GAGCACGTACGCACCTGTA 59.789 57.895 16.72 0.00 0.00 2.74
685 883 2.126424 GTCCGTGTCGCTGAGGAC 60.126 66.667 0.00 0.00 45.07 3.85
691 889 4.129737 CCGATGGTCCGTGTCGCT 62.130 66.667 5.80 0.00 34.25 4.93
730 1252 3.697439 AATGGTCCGTCATGGCCGG 62.697 63.158 15.89 15.89 46.83 6.13
745 1267 1.568612 ATTAGATGCCGCGGCGAATG 61.569 55.000 41.73 9.77 45.51 2.67
760 1282 7.013083 AGCACTAATCTCAAAGCCAATGATTAG 59.987 37.037 15.28 15.28 45.61 1.73
802 1328 4.712829 TGCAGTTAGCTATAACACCTGGTA 59.287 41.667 0.00 0.00 43.21 3.25
813 1345 3.219176 ACCATGCATGCAGTTAGCTAT 57.781 42.857 26.69 3.09 45.94 2.97
814 1346 2.715749 ACCATGCATGCAGTTAGCTA 57.284 45.000 26.69 0.00 45.94 3.32
854 1392 2.577059 GGGATGACGACGAGGCAA 59.423 61.111 0.00 0.00 44.01 4.52
855 1393 3.458163 GGGGATGACGACGAGGCA 61.458 66.667 0.00 0.00 45.56 4.75
856 1394 4.222847 GGGGGATGACGACGAGGC 62.223 72.222 0.00 0.00 0.00 4.70
857 1395 2.017559 GAAGGGGGATGACGACGAGG 62.018 65.000 0.00 0.00 0.00 4.63
858 1396 1.437986 GAAGGGGGATGACGACGAG 59.562 63.158 0.00 0.00 0.00 4.18
860 1398 2.104331 CGAAGGGGGATGACGACG 59.896 66.667 0.00 0.00 0.00 5.12
862 1400 3.014085 GCACGAAGGGGGATGACGA 62.014 63.158 0.00 0.00 0.00 4.20
863 1401 2.511600 GCACGAAGGGGGATGACG 60.512 66.667 0.00 0.00 0.00 4.35
864 1402 1.153349 GAGCACGAAGGGGGATGAC 60.153 63.158 0.00 0.00 0.00 3.06
865 1403 1.306141 AGAGCACGAAGGGGGATGA 60.306 57.895 0.00 0.00 0.00 2.92
866 1404 1.144936 GAGAGCACGAAGGGGGATG 59.855 63.158 0.00 0.00 0.00 3.51
867 1405 2.066999 GGAGAGCACGAAGGGGGAT 61.067 63.158 0.00 0.00 0.00 3.85
868 1406 2.683933 GGAGAGCACGAAGGGGGA 60.684 66.667 0.00 0.00 0.00 4.81
869 1407 3.787001 GGGAGAGCACGAAGGGGG 61.787 72.222 0.00 0.00 0.00 5.40
870 1408 3.003173 TGGGAGAGCACGAAGGGG 61.003 66.667 0.00 0.00 0.00 4.79
871 1409 2.266055 GTGGGAGAGCACGAAGGG 59.734 66.667 0.00 0.00 0.00 3.95
872 1410 1.374758 GTGTGGGAGAGCACGAAGG 60.375 63.158 0.00 0.00 0.00 3.46
889 1450 0.463204 CATCATGGAGCGTGAGGAGT 59.537 55.000 0.00 0.00 33.69 3.85
890 1451 0.249784 CCATCATGGAGCGTGAGGAG 60.250 60.000 0.00 0.00 40.96 3.69
891 1452 1.825341 CCATCATGGAGCGTGAGGA 59.175 57.895 0.00 0.00 40.96 3.71
907 1468 1.058284 TGGATGGATCGATCATGCCA 58.942 50.000 25.93 23.26 32.96 4.92
916 1477 1.227263 GTGGGACGTGGATGGATCG 60.227 63.158 0.00 0.00 0.00 3.69
927 1488 1.375853 TATACGGACACGGTGGGACG 61.376 60.000 13.48 15.01 46.48 4.79
928 1489 1.035139 ATATACGGACACGGTGGGAC 58.965 55.000 13.48 3.61 46.48 4.46
929 1490 2.655090 TATATACGGACACGGTGGGA 57.345 50.000 13.48 0.00 46.48 4.37
930 1491 3.181477 TGTTTATATACGGACACGGTGGG 60.181 47.826 13.48 3.94 46.48 4.61
936 1497 3.732721 GGCTCGTGTTTATATACGGACAC 59.267 47.826 10.85 10.85 39.10 3.67
937 1498 3.243501 GGGCTCGTGTTTATATACGGACA 60.244 47.826 2.95 0.00 39.10 4.02
938 1499 3.005155 AGGGCTCGTGTTTATATACGGAC 59.995 47.826 2.95 0.00 39.10 4.79
939 1500 3.225104 AGGGCTCGTGTTTATATACGGA 58.775 45.455 2.95 0.00 39.10 4.69
957 1518 4.247380 GCGATGGAGCTGGGAGGG 62.247 72.222 0.00 0.00 0.00 4.30
969 1530 0.597637 GTGGGTATGGTCGAGCGATG 60.598 60.000 10.46 0.00 0.00 3.84
988 1549 3.797039 AGGACGACATCAACACATATGG 58.203 45.455 7.80 0.00 0.00 2.74
989 1550 3.804325 GGAGGACGACATCAACACATATG 59.196 47.826 0.00 0.00 0.00 1.78
990 1551 3.706594 AGGAGGACGACATCAACACATAT 59.293 43.478 1.56 0.00 0.00 1.78
991 1552 3.096852 AGGAGGACGACATCAACACATA 58.903 45.455 1.56 0.00 0.00 2.29
992 1553 1.902508 AGGAGGACGACATCAACACAT 59.097 47.619 1.56 0.00 0.00 3.21
993 1554 1.338107 AGGAGGACGACATCAACACA 58.662 50.000 1.56 0.00 0.00 3.72
994 1555 2.288825 TGAAGGAGGACGACATCAACAC 60.289 50.000 1.56 0.00 0.00 3.32
997 1558 2.093500 CCATGAAGGAGGACGACATCAA 60.093 50.000 1.56 0.00 41.22 2.57
999 1560 1.757118 TCCATGAAGGAGGACGACATC 59.243 52.381 0.00 0.00 43.07 3.06
1000 1561 1.866015 TCCATGAAGGAGGACGACAT 58.134 50.000 0.00 0.00 43.07 3.06
1001 1562 3.374318 TCCATGAAGGAGGACGACA 57.626 52.632 0.00 0.00 43.07 4.35
1144 1711 3.172106 GGAGGAGGCTAAGGGGGC 61.172 72.222 0.00 0.00 0.00 5.80
1622 2195 3.193691 TCGTTGACCAAGAAGAGGAGATC 59.806 47.826 0.00 0.00 0.00 2.75
1639 2295 4.141855 AGCGAACTGGTTAATTTCGTTG 57.858 40.909 5.02 0.00 43.20 4.10
1645 2301 4.202245 TCAGCTAGCGAACTGGTTAATT 57.798 40.909 9.55 0.00 34.57 1.40
1646 2302 3.887621 TCAGCTAGCGAACTGGTTAAT 57.112 42.857 9.55 0.00 34.57 1.40
1647 2303 3.887621 ATCAGCTAGCGAACTGGTTAA 57.112 42.857 9.55 0.00 34.57 2.01
1648 2304 3.887621 AATCAGCTAGCGAACTGGTTA 57.112 42.857 9.55 0.00 35.50 2.85
1652 2308 5.344066 TCTTCTAAATCAGCTAGCGAACTG 58.656 41.667 9.55 1.81 35.15 3.16
1695 2351 4.350225 AGAACACCTCCATCATATCTGCAT 59.650 41.667 0.00 0.00 0.00 3.96
1851 2535 1.063006 CGCGAACCTGCCATGAATG 59.937 57.895 0.00 0.00 0.00 2.67
1852 2536 1.078497 TCGCGAACCTGCCATGAAT 60.078 52.632 6.20 0.00 0.00 2.57
2136 2935 8.135382 TGGCTATTAGACCCTACTAAATGATC 57.865 38.462 0.00 0.00 36.23 2.92
2232 3049 0.458889 TCGTACGTAGCCAATGTGCC 60.459 55.000 16.05 0.00 0.00 5.01
2312 3137 1.202770 AGGACGCCATGTAATAAGGGC 60.203 52.381 0.00 0.00 42.98 5.19
2360 3185 9.654663 GGAGGGAGTATATTGTATGTGAAATAC 57.345 37.037 0.00 0.00 0.00 1.89
2369 3195 4.202749 TGGGTCGGAGGGAGTATATTGTAT 60.203 45.833 0.00 0.00 0.00 2.29
2379 3205 2.238898 ACTTATTTTGGGTCGGAGGGAG 59.761 50.000 0.00 0.00 0.00 4.30
2380 3206 2.026636 CACTTATTTTGGGTCGGAGGGA 60.027 50.000 0.00 0.00 0.00 4.20
2381 3207 2.290705 ACACTTATTTTGGGTCGGAGGG 60.291 50.000 0.00 0.00 0.00 4.30
2382 3208 3.007635 GACACTTATTTTGGGTCGGAGG 58.992 50.000 0.00 0.00 0.00 4.30
2383 3209 3.933332 GAGACACTTATTTTGGGTCGGAG 59.067 47.826 0.00 0.00 33.84 4.63
2384 3210 3.325425 TGAGACACTTATTTTGGGTCGGA 59.675 43.478 0.00 0.00 33.84 4.55
2385 3211 3.670625 TGAGACACTTATTTTGGGTCGG 58.329 45.455 0.00 0.00 33.84 4.79
2386 3212 4.378459 GCTTGAGACACTTATTTTGGGTCG 60.378 45.833 0.00 0.00 33.84 4.79
2387 3213 4.762251 AGCTTGAGACACTTATTTTGGGTC 59.238 41.667 0.00 0.00 0.00 4.46
2388 3214 4.729868 AGCTTGAGACACTTATTTTGGGT 58.270 39.130 0.00 0.00 0.00 4.51
2389 3215 5.712152 AAGCTTGAGACACTTATTTTGGG 57.288 39.130 0.00 0.00 0.00 4.12
2390 3216 9.774742 GTATTAAGCTTGAGACACTTATTTTGG 57.225 33.333 9.86 0.00 0.00 3.28
2404 3230 9.745880 CCGTCTCTAAATAAGTATTAAGCTTGA 57.254 33.333 9.86 0.00 32.17 3.02
2405 3231 9.745880 TCCGTCTCTAAATAAGTATTAAGCTTG 57.254 33.333 9.86 0.00 32.17 4.01
2406 3232 9.968870 CTCCGTCTCTAAATAAGTATTAAGCTT 57.031 33.333 3.48 3.48 32.17 3.74
2407 3233 8.578151 CCTCCGTCTCTAAATAAGTATTAAGCT 58.422 37.037 0.00 0.00 32.17 3.74
2408 3234 7.813627 CCCTCCGTCTCTAAATAAGTATTAAGC 59.186 40.741 0.00 0.00 32.17 3.09
2409 3235 9.075678 TCCCTCCGTCTCTAAATAAGTATTAAG 57.924 37.037 0.00 0.00 32.17 1.85
2410 3236 9.075678 CTCCCTCCGTCTCTAAATAAGTATTAA 57.924 37.037 0.00 0.00 32.17 1.40
2411 3237 8.223330 ACTCCCTCCGTCTCTAAATAAGTATTA 58.777 37.037 0.00 0.00 33.48 0.98
2412 3238 7.068061 ACTCCCTCCGTCTCTAAATAAGTATT 58.932 38.462 0.00 0.00 0.00 1.89
2413 3239 6.612741 ACTCCCTCCGTCTCTAAATAAGTAT 58.387 40.000 0.00 0.00 0.00 2.12
2414 3240 6.011122 ACTCCCTCCGTCTCTAAATAAGTA 57.989 41.667 0.00 0.00 0.00 2.24
2415 3241 4.869451 ACTCCCTCCGTCTCTAAATAAGT 58.131 43.478 0.00 0.00 0.00 2.24
2416 3242 6.715718 TGATACTCCCTCCGTCTCTAAATAAG 59.284 42.308 0.00 0.00 0.00 1.73
2417 3243 6.607970 TGATACTCCCTCCGTCTCTAAATAA 58.392 40.000 0.00 0.00 0.00 1.40
2418 3244 6.196918 TGATACTCCCTCCGTCTCTAAATA 57.803 41.667 0.00 0.00 0.00 1.40
2419 3245 5.063017 TGATACTCCCTCCGTCTCTAAAT 57.937 43.478 0.00 0.00 0.00 1.40
2420 3246 4.515028 TGATACTCCCTCCGTCTCTAAA 57.485 45.455 0.00 0.00 0.00 1.85
2421 3247 4.079901 ACTTGATACTCCCTCCGTCTCTAA 60.080 45.833 0.00 0.00 0.00 2.10
2422 3248 3.458857 ACTTGATACTCCCTCCGTCTCTA 59.541 47.826 0.00 0.00 0.00 2.43
2423 3249 2.242708 ACTTGATACTCCCTCCGTCTCT 59.757 50.000 0.00 0.00 0.00 3.10
2424 3250 2.657143 ACTTGATACTCCCTCCGTCTC 58.343 52.381 0.00 0.00 0.00 3.36
2425 3251 2.830651 ACTTGATACTCCCTCCGTCT 57.169 50.000 0.00 0.00 0.00 4.18
2426 3252 3.553904 ACTACTTGATACTCCCTCCGTC 58.446 50.000 0.00 0.00 0.00 4.79
2427 3253 3.666345 ACTACTTGATACTCCCTCCGT 57.334 47.619 0.00 0.00 0.00 4.69
2428 3254 6.885376 ACATATACTACTTGATACTCCCTCCG 59.115 42.308 0.00 0.00 0.00 4.63
2429 3255 7.889073 TGACATATACTACTTGATACTCCCTCC 59.111 40.741 0.00 0.00 0.00 4.30
2430 3256 8.865420 TGACATATACTACTTGATACTCCCTC 57.135 38.462 0.00 0.00 0.00 4.30
2462 3288 5.334879 GGAGTAGTTTCGAACGTAGTGGTAA 60.335 44.000 0.00 0.00 45.00 2.85
2463 3289 4.154195 GGAGTAGTTTCGAACGTAGTGGTA 59.846 45.833 0.00 0.00 45.00 3.25
2464 3290 3.057946 GGAGTAGTTTCGAACGTAGTGGT 60.058 47.826 0.00 0.00 45.00 4.16
2465 3291 3.496155 GGAGTAGTTTCGAACGTAGTGG 58.504 50.000 0.00 0.00 45.00 4.00
2466 3292 3.190118 AGGGAGTAGTTTCGAACGTAGTG 59.810 47.826 0.00 0.00 45.00 2.74
2470 3299 1.198637 CGAGGGAGTAGTTTCGAACGT 59.801 52.381 0.00 0.00 35.19 3.99
2475 3304 1.542915 TGAACCGAGGGAGTAGTTTCG 59.457 52.381 0.00 0.00 0.00 3.46
2483 3312 3.064931 GTGTAAAAGTGAACCGAGGGAG 58.935 50.000 0.00 0.00 0.00 4.30
2487 3316 3.122948 CCATCGTGTAAAAGTGAACCGAG 59.877 47.826 0.00 0.00 0.00 4.63
2490 3319 4.062991 AGACCATCGTGTAAAAGTGAACC 58.937 43.478 0.00 0.00 0.00 3.62
2495 3324 7.797038 AAAAGTTAGACCATCGTGTAAAAGT 57.203 32.000 0.00 0.00 30.21 2.66
2549 3378 7.120579 ACTGAAATGAGTGAACAAACACACTAA 59.879 33.333 0.00 0.00 45.54 2.24
2701 3587 4.401837 GGAACTCCCTTTGTCTACGTCTAT 59.598 45.833 0.00 0.00 0.00 1.98
2704 3590 2.298163 TGGAACTCCCTTTGTCTACGTC 59.702 50.000 0.00 0.00 35.38 4.34
2706 3592 2.685100 GTGGAACTCCCTTTGTCTACG 58.315 52.381 0.00 0.00 35.38 3.51
2729 3615 9.635520 GTCGTATATAAAATAGTACTGCCATGT 57.364 33.333 5.39 0.00 0.00 3.21
2730 3616 8.795341 CGTCGTATATAAAATAGTACTGCCATG 58.205 37.037 5.39 0.00 0.00 3.66
2731 3617 7.972277 CCGTCGTATATAAAATAGTACTGCCAT 59.028 37.037 5.39 0.00 0.00 4.40
2732 3618 7.307694 CCGTCGTATATAAAATAGTACTGCCA 58.692 38.462 5.39 0.00 0.00 4.92
2733 3619 6.252228 GCCGTCGTATATAAAATAGTACTGCC 59.748 42.308 5.39 0.00 0.00 4.85
2734 3620 6.803320 TGCCGTCGTATATAAAATAGTACTGC 59.197 38.462 5.39 0.00 0.00 4.40
2735 3621 7.484007 CCTGCCGTCGTATATAAAATAGTACTG 59.516 40.741 5.39 0.00 0.00 2.74
2753 3639 1.000283 CCATCTAGATGTCCTGCCGTC 60.000 57.143 27.03 0.00 37.11 4.79
2761 3647 1.004440 GGCCGGCCATCTAGATGTC 60.004 63.158 40.73 17.49 37.11 3.06
2803 3818 3.206150 AGTTGATGTCGTCAAGCTGTTT 58.794 40.909 7.76 0.00 46.99 2.83
3377 4569 3.592856 AACATACGCCGCGTTCCCA 62.593 57.895 25.47 6.09 41.54 4.37
3424 4616 3.542742 GCGACGTAACGAGCTGCC 61.543 66.667 0.00 0.00 33.46 4.85
3427 4619 0.454620 CAAGAGCGACGTAACGAGCT 60.455 55.000 0.00 0.00 43.36 4.09
3516 4708 6.996180 TTCCGAGGGAATATGTTCTTCTAT 57.004 37.500 1.99 0.00 36.71 1.98
3608 4800 7.389053 TGTGCACTATACATACATTGTGTGAAA 59.611 33.333 19.41 7.90 39.48 2.69
3614 4806 5.739959 TGGTGTGCACTATACATACATTGT 58.260 37.500 19.41 0.00 42.62 2.71
3652 4851 1.487976 AGATCGACCCATTGTCTGCAT 59.512 47.619 0.00 0.00 42.13 3.96
3660 4859 2.567169 TGTCACTTGAGATCGACCCATT 59.433 45.455 0.00 0.00 0.00 3.16
3662 4861 1.627864 TGTCACTTGAGATCGACCCA 58.372 50.000 0.00 0.00 0.00 4.51
3682 4888 8.302438 CAAGTTAAAGATGCCAAGAAGAGAAAT 58.698 33.333 0.00 0.00 0.00 2.17
3690 4896 6.206634 CCTTACACAAGTTAAAGATGCCAAGA 59.793 38.462 0.00 0.00 0.00 3.02
3710 4916 0.966179 CCCTTTGGTGTTGCCCTTAC 59.034 55.000 0.00 0.00 36.04 2.34
3732 4938 3.502211 CACTTTCTGCATCCGTTTAGGTT 59.498 43.478 0.00 0.00 41.99 3.50
3736 4942 3.071479 GGACACTTTCTGCATCCGTTTA 58.929 45.455 0.00 0.00 0.00 2.01
3765 4971 4.326826 TCCTGTCTGTCATTCAAATGGAC 58.673 43.478 3.05 3.94 37.03 4.02
3767 4973 4.330250 ACTCCTGTCTGTCATTCAAATGG 58.670 43.478 3.05 0.00 37.03 3.16
3768 4974 4.394300 GGACTCCTGTCTGTCATTCAAATG 59.606 45.833 0.00 0.00 42.54 2.32
3769 4975 4.583871 GGACTCCTGTCTGTCATTCAAAT 58.416 43.478 0.00 0.00 42.54 2.32
3770 4976 3.554960 CGGACTCCTGTCTGTCATTCAAA 60.555 47.826 0.00 0.00 42.90 2.69
3771 4977 2.029020 CGGACTCCTGTCTGTCATTCAA 60.029 50.000 0.00 0.00 42.90 2.69
3772 4978 1.546029 CGGACTCCTGTCTGTCATTCA 59.454 52.381 0.00 0.00 42.90 2.57
3773 4979 1.134965 CCGGACTCCTGTCTGTCATTC 60.135 57.143 0.00 0.00 45.59 2.67
3775 4981 1.608717 GCCGGACTCCTGTCTGTCAT 61.609 60.000 5.05 0.00 45.59 3.06
3776 4982 2.276116 GCCGGACTCCTGTCTGTCA 61.276 63.158 5.05 0.00 45.59 3.58
3783 4989 1.078848 CTCTTTGGCCGGACTCCTG 60.079 63.158 9.82 0.00 0.00 3.86
3787 4993 0.698818 AATTCCTCTTTGGCCGGACT 59.301 50.000 9.82 0.00 35.26 3.85
3792 4998 2.373224 CTCTCCAATTCCTCTTTGGCC 58.627 52.381 0.00 0.00 42.79 5.36
3793 4999 1.747924 GCTCTCCAATTCCTCTTTGGC 59.252 52.381 0.00 0.00 42.79 4.52
3798 5004 2.260639 TCAGGCTCTCCAATTCCTCT 57.739 50.000 0.00 0.00 33.74 3.69
3825 5031 9.152595 CATTGATCAATCATTATCAGATCGAGT 57.847 33.333 18.16 0.00 38.28 4.18
3835 5041 7.679783 TCGGTACTCCATTGATCAATCATTAT 58.320 34.615 18.16 6.05 36.56 1.28
3858 5064 4.177026 CCCAACAAAGAGTCTACTCATCG 58.823 47.826 12.43 2.69 45.21 3.84
3866 5072 2.443255 ACATCACCCCAACAAAGAGTCT 59.557 45.455 0.00 0.00 0.00 3.24
3869 5075 2.816087 CTCACATCACCCCAACAAAGAG 59.184 50.000 0.00 0.00 0.00 2.85
3920 5279 8.416329 TCTTATATTTGTTTACGGAGGGAGTAC 58.584 37.037 0.00 0.00 0.00 2.73
3921 5280 8.537728 TCTTATATTTGTTTACGGAGGGAGTA 57.462 34.615 0.00 0.00 0.00 2.59
3922 5281 7.427989 TCTTATATTTGTTTACGGAGGGAGT 57.572 36.000 0.00 0.00 0.00 3.85
3923 5282 8.148351 TGATCTTATATTTGTTTACGGAGGGAG 58.852 37.037 0.00 0.00 0.00 4.30
3924 5283 8.025270 TGATCTTATATTTGTTTACGGAGGGA 57.975 34.615 0.00 0.00 0.00 4.20
3925 5284 8.848474 ATGATCTTATATTTGTTTACGGAGGG 57.152 34.615 0.00 0.00 0.00 4.30
3963 5322 9.136952 GAGCGTTTAGAACTTTAGATCACTAAA 57.863 33.333 0.00 0.00 43.52 1.85
3964 5323 8.521176 AGAGCGTTTAGAACTTTAGATCACTAA 58.479 33.333 0.00 0.00 36.90 2.24
3965 5324 8.053026 AGAGCGTTTAGAACTTTAGATCACTA 57.947 34.615 0.00 0.00 0.00 2.74
3966 5325 6.926313 AGAGCGTTTAGAACTTTAGATCACT 58.074 36.000 0.00 0.00 0.00 3.41
3967 5326 7.583860 AAGAGCGTTTAGAACTTTAGATCAC 57.416 36.000 0.00 0.00 0.00 3.06
3982 5341 9.099454 CCTCTGTAAAGAAATATAAGAGCGTTT 57.901 33.333 0.00 0.00 0.00 3.60
3983 5342 7.711339 CCCTCTGTAAAGAAATATAAGAGCGTT 59.289 37.037 0.00 0.00 0.00 4.84
3984 5343 7.069578 TCCCTCTGTAAAGAAATATAAGAGCGT 59.930 37.037 0.00 0.00 0.00 5.07
3985 5344 7.434492 TCCCTCTGTAAAGAAATATAAGAGCG 58.566 38.462 0.00 0.00 0.00 5.03
3986 5345 8.425703 ACTCCCTCTGTAAAGAAATATAAGAGC 58.574 37.037 0.00 0.00 0.00 4.09
3992 5351 9.268282 TGAAGTACTCCCTCTGTAAAGAAATAT 57.732 33.333 0.00 0.00 0.00 1.28
3993 5352 8.660295 TGAAGTACTCCCTCTGTAAAGAAATA 57.340 34.615 0.00 0.00 0.00 1.40
3994 5353 7.455008 TCTGAAGTACTCCCTCTGTAAAGAAAT 59.545 37.037 0.00 0.00 0.00 2.17
3995 5354 6.781014 TCTGAAGTACTCCCTCTGTAAAGAAA 59.219 38.462 0.00 0.00 0.00 2.52
3996 5355 6.312529 TCTGAAGTACTCCCTCTGTAAAGAA 58.687 40.000 0.00 0.00 0.00 2.52
3997 5356 5.888901 TCTGAAGTACTCCCTCTGTAAAGA 58.111 41.667 0.00 0.00 0.00 2.52
3998 5357 6.591750 TTCTGAAGTACTCCCTCTGTAAAG 57.408 41.667 0.00 0.00 0.00 1.85
3999 5358 6.989155 TTTCTGAAGTACTCCCTCTGTAAA 57.011 37.500 0.00 0.00 0.00 2.01
4000 5359 7.554959 AATTTCTGAAGTACTCCCTCTGTAA 57.445 36.000 0.00 0.00 0.00 2.41
4001 5360 7.554959 AAATTTCTGAAGTACTCCCTCTGTA 57.445 36.000 0.00 0.00 0.00 2.74
4002 5361 6.441088 AAATTTCTGAAGTACTCCCTCTGT 57.559 37.500 0.00 0.00 0.00 3.41
4003 5362 8.722394 GTTTAAATTTCTGAAGTACTCCCTCTG 58.278 37.037 0.00 0.00 0.00 3.35
4004 5363 7.883833 GGTTTAAATTTCTGAAGTACTCCCTCT 59.116 37.037 0.00 0.00 0.00 3.69
4005 5364 7.664318 TGGTTTAAATTTCTGAAGTACTCCCTC 59.336 37.037 0.00 0.00 0.00 4.30
4006 5365 7.447545 GTGGTTTAAATTTCTGAAGTACTCCCT 59.552 37.037 0.00 0.00 0.00 4.20
4007 5366 7.309012 GGTGGTTTAAATTTCTGAAGTACTCCC 60.309 40.741 0.00 0.00 0.00 4.30
4008 5367 7.309012 GGGTGGTTTAAATTTCTGAAGTACTCC 60.309 40.741 0.00 0.00 0.00 3.85
4009 5368 7.229907 TGGGTGGTTTAAATTTCTGAAGTACTC 59.770 37.037 0.00 0.00 0.00 2.59
4010 5369 7.064229 TGGGTGGTTTAAATTTCTGAAGTACT 58.936 34.615 0.00 0.00 0.00 2.73
4011 5370 7.279750 TGGGTGGTTTAAATTTCTGAAGTAC 57.720 36.000 0.00 0.00 0.00 2.73
4029 5388 3.562182 AGTTTTGGAGTACTTTGGGTGG 58.438 45.455 0.00 0.00 0.00 4.61
4042 5401 5.369833 TGTCTTCGAAACCATAGTTTTGGA 58.630 37.500 0.00 0.00 46.25 3.53
4043 5402 5.682943 TGTCTTCGAAACCATAGTTTTGG 57.317 39.130 0.00 0.00 46.25 3.28
4045 5404 7.222031 GCTTTTTGTCTTCGAAACCATAGTTTT 59.778 33.333 0.00 0.00 46.25 2.43
4047 5406 6.183360 TGCTTTTTGTCTTCGAAACCATAGTT 60.183 34.615 0.00 0.00 38.03 2.24
4058 5417 5.686841 TGTTTCATCATGCTTTTTGTCTTCG 59.313 36.000 0.00 0.00 0.00 3.79
4069 5428 4.942761 AAACCTTGTGTTTCATCATGCT 57.057 36.364 0.00 0.00 43.74 3.79
4088 5447 6.931840 GTCCATAAACATTACCCAAGCAAAAA 59.068 34.615 0.00 0.00 0.00 1.94
4099 5458 8.827677 GGTATTGACTCTGTCCATAAACATTAC 58.172 37.037 0.00 0.00 0.00 1.89
4139 5498 3.642848 ACCAATGTCAAAATGCCTTCTGT 59.357 39.130 0.00 0.00 0.00 3.41
4256 5783 4.580580 GGTGTCCCAGTGGATATGAATTTC 59.419 45.833 11.95 0.00 44.28 2.17
4346 5875 4.953667 TGTTCCATGCTGCAAAATAACAA 58.046 34.783 6.36 0.00 0.00 2.83
4369 6167 9.691362 GTAGCATCTATTTCTTTGTTTCCAAAA 57.309 29.630 0.00 0.00 39.95 2.44
4466 6264 4.629200 CAGCAAGCTCTGGTTTTACTCTAG 59.371 45.833 0.00 0.00 31.85 2.43
4489 6287 9.813446 AGAAGAGATGAAATTGCCAATAAATTC 57.187 29.630 0.00 0.00 0.00 2.17
4531 6329 7.894364 AGGAGACTAACAGGAAACTATACAAGA 59.106 37.037 0.00 0.00 37.57 3.02


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.