Multiple sequence alignment - TraesCS4B01G028100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G028100 chr4B 100.000 3800 0 0 1 3800 21146039 21149838 0.000000e+00 7018.0
1 TraesCS4B01G028100 chr4B 89.562 297 20 4 946 1241 503384949 503384663 2.160000e-97 366.0
2 TraesCS4B01G028100 chr4B 81.633 147 23 4 3423 3569 7399226 7399368 6.670000e-23 119.0
3 TraesCS4B01G028100 chr4A 92.517 1430 44 28 2145 3552 591920773 591922161 0.000000e+00 1989.0
4 TraesCS4B01G028100 chr4A 82.767 1236 96 61 808 2016 591919512 591920657 0.000000e+00 994.0
5 TraesCS4B01G028100 chr4A 94.297 263 8 4 3538 3800 591928872 591929127 2.750000e-106 396.0
6 TraesCS4B01G028100 chr4A 91.837 196 10 4 471 663 591919195 591919387 6.260000e-68 268.0
7 TraesCS4B01G028100 chr4A 84.615 286 26 8 2695 2972 592339629 592339904 6.260000e-68 268.0
8 TraesCS4B01G028100 chr4A 84.615 286 26 7 2695 2972 592641972 592642247 6.260000e-68 268.0
9 TraesCS4B01G028100 chr4A 84.615 286 25 8 2695 2972 591288228 591288502 2.250000e-67 267.0
10 TraesCS4B01G028100 chr4A 84.615 286 25 8 2695 2972 592931005 592931279 2.250000e-67 267.0
11 TraesCS4B01G028100 chr4A 84.266 286 26 8 2695 2972 591413130 591412856 1.050000e-65 261.0
12 TraesCS4B01G028100 chr4A 84.342 281 26 7 2695 2967 591670737 591670467 3.770000e-65 259.0
13 TraesCS4B01G028100 chr4A 83.916 286 27 8 2695 2972 591316054 591315780 4.870000e-64 255.0
14 TraesCS4B01G028100 chr4A 87.568 185 18 5 3 183 591918740 591918923 3.850000e-50 209.0
15 TraesCS4B01G028100 chr4D 92.009 1389 45 19 2064 3418 11080280 11081636 0.000000e+00 1890.0
16 TraesCS4B01G028100 chr4D 88.889 729 31 22 808 1503 11079111 11079822 0.000000e+00 852.0
17 TraesCS4B01G028100 chr4D 96.373 386 8 3 3415 3800 11114037 11114416 6.930000e-177 630.0
18 TraesCS4B01G028100 chr4D 96.373 386 8 3 3415 3800 11130651 11131030 6.930000e-177 630.0
19 TraesCS4B01G028100 chr4D 88.060 335 22 13 471 800 11078573 11078894 7.700000e-102 381.0
20 TraesCS4B01G028100 chr4D 87.963 216 23 2 1726 1938 11079915 11080130 6.300000e-63 252.0
21 TraesCS4B01G028100 chr4D 87.963 108 12 1 3580 3687 9213040 9212934 3.980000e-25 126.0
22 TraesCS4B01G028100 chr6A 90.169 295 19 3 944 1238 29281649 29281933 3.580000e-100 375.0
23 TraesCS4B01G028100 chr3B 89.726 292 21 2 950 1241 62554452 62554170 7.760000e-97 364.0
24 TraesCS4B01G028100 chr3B 88.926 298 20 4 2064 2360 360429640 360429355 4.670000e-94 355.0
25 TraesCS4B01G028100 chr3B 83.871 217 29 4 1698 1911 360430039 360429826 6.440000e-48 202.0
26 TraesCS4B01G028100 chr3B 94.565 92 5 0 1391 1482 360430164 360430073 3.960000e-30 143.0
27 TraesCS4B01G028100 chr3B 83.951 81 7 5 577 656 495837055 495836980 5.270000e-09 73.1
28 TraesCS4B01G028100 chr3B 90.000 50 0 2 873 918 442915719 442915767 4.100000e-05 60.2
29 TraesCS4B01G028100 chr1B 89.262 298 23 2 944 1241 114449853 114449565 7.760000e-97 364.0
30 TraesCS4B01G028100 chr1B 89.153 295 23 2 944 1238 614436292 614436577 3.610000e-95 359.0
31 TraesCS4B01G028100 chr1B 89.706 136 12 2 356 491 62463338 62463471 5.050000e-39 172.0
32 TraesCS4B01G028100 chr1B 90.323 124 12 0 355 478 551031883 551031760 3.040000e-36 163.0
33 TraesCS4B01G028100 chr1B 89.362 47 3 2 611 656 105731889 105731844 1.470000e-04 58.4
34 TraesCS4B01G028100 chr1A 89.492 295 21 3 944 1238 486125454 486125738 7.760000e-97 364.0
35 TraesCS4B01G028100 chr7B 89.691 291 21 2 951 1241 114753372 114753091 2.790000e-96 363.0
36 TraesCS4B01G028100 chr7B 90.566 53 2 2 873 922 614251642 614251590 2.450000e-07 67.6
37 TraesCS4B01G028100 chr2B 93.496 123 8 0 352 474 142446759 142446637 2.330000e-42 183.0
38 TraesCS4B01G028100 chr5A 90.071 141 10 1 950 1090 663864488 663864352 3.020000e-41 180.0
39 TraesCS4B01G028100 chr5B 93.333 120 8 0 356 475 529043519 529043400 1.080000e-40 178.0
40 TraesCS4B01G028100 chr5B 91.489 47 2 2 484 530 102421462 102421506 3.170000e-06 63.9
41 TraesCS4B01G028100 chr5B 82.192 73 12 1 590 661 620008325 620008397 1.140000e-05 62.1
42 TraesCS4B01G028100 chr5D 92.063 126 9 1 356 481 565900789 565900913 3.900000e-40 176.0
43 TraesCS4B01G028100 chr5D 91.667 96 7 1 3478 3573 467856838 467856744 8.570000e-27 132.0
44 TraesCS4B01G028100 chr2D 90.152 132 12 1 353 483 95519539 95519670 1.820000e-38 171.0
45 TraesCS4B01G028100 chrUn 91.803 122 8 2 355 475 87827392 87827512 6.530000e-38 169.0
46 TraesCS4B01G028100 chrUn 91.803 122 8 2 355 475 309972437 309972557 6.530000e-38 169.0
47 TraesCS4B01G028100 chr2A 89.922 129 13 0 347 475 16356304 16356176 2.350000e-37 167.0
48 TraesCS4B01G028100 chr2A 77.500 160 29 4 497 653 107380228 107380383 5.230000e-14 89.8
49 TraesCS4B01G028100 chr3D 82.609 184 26 6 355 535 2905419 2905599 1.410000e-34 158.0
50 TraesCS4B01G028100 chr1D 82.292 96 14 3 550 644 492369782 492369875 3.150000e-11 80.5
51 TraesCS4B01G028100 chr6D 97.059 34 0 1 504 536 388205235 388205268 5.300000e-04 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G028100 chr4B 21146039 21149838 3799 False 7018.000000 7018 100.000000 1 3800 1 chr4B.!!$F2 3799
1 TraesCS4B01G028100 chr4A 591918740 591922161 3421 False 865.000000 1989 88.672250 3 3552 4 chr4A.!!$F6 3549
2 TraesCS4B01G028100 chr4D 11078573 11081636 3063 False 843.750000 1890 89.230250 471 3418 4 chr4D.!!$F3 2947
3 TraesCS4B01G028100 chr3B 360429355 360430164 809 True 233.333333 355 89.120667 1391 2360 3 chr3B.!!$R3 969

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
118 121 0.370273 CACGACAACTATTGAGCGGC 59.630 55.0 0.0 0.0 36.72 6.53 F
1667 2055 0.105246 AATCAGTTGGGGGTGCCAAA 60.105 50.0 0.0 0.0 0.00 3.28 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2048 2494 0.179032 TGCATTCGTCCAACAGGTGT 60.179 50.0 0.0 0.0 0.0 4.16 R
3297 3781 1.480789 TGTGCTCCTATCGCTACCAA 58.519 50.0 0.0 0.0 0.0 3.67 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
72 73 2.787129 CGATAACTATGTTTCGCTCGCA 59.213 45.455 0.00 0.00 0.00 5.10
82 83 2.647529 TTCGCTCGCACTGATTCTTA 57.352 45.000 0.00 0.00 0.00 2.10
86 87 4.871513 TCGCTCGCACTGATTCTTATTAT 58.128 39.130 0.00 0.00 0.00 1.28
87 88 5.289595 TCGCTCGCACTGATTCTTATTATT 58.710 37.500 0.00 0.00 0.00 1.40
113 115 5.204409 ACCTACAACACGACAACTATTGA 57.796 39.130 0.00 0.00 0.00 2.57
118 121 0.370273 CACGACAACTATTGAGCGGC 59.630 55.000 0.00 0.00 36.72 6.53
138 141 1.202256 CCTAGCATTGTACGTGAGCGA 60.202 52.381 0.00 0.00 42.00 4.93
143 146 2.477357 GCATTGTACGTGAGCGAGAGTA 60.477 50.000 0.00 0.00 42.00 2.59
145 148 4.554134 GCATTGTACGTGAGCGAGAGTATA 60.554 45.833 0.00 0.00 42.00 1.47
151 154 4.280461 ACGTGAGCGAGAGTATATTTTCG 58.720 43.478 4.09 4.09 42.00 3.46
152 155 3.664486 CGTGAGCGAGAGTATATTTTCGG 59.336 47.826 9.67 0.00 41.33 4.30
153 156 4.608951 GTGAGCGAGAGTATATTTTCGGT 58.391 43.478 11.72 11.72 45.11 4.69
155 158 5.041287 TGAGCGAGAGTATATTTTCGGTTG 58.959 41.667 12.84 0.00 42.88 3.77
161 166 7.524065 CGAGAGTATATTTTCGGTTGGTTTTT 58.476 34.615 0.80 0.00 0.00 1.94
162 167 8.658609 CGAGAGTATATTTTCGGTTGGTTTTTA 58.341 33.333 0.80 0.00 0.00 1.52
177 182 4.225492 TGGTTTTTATCGGGTATCCACTGA 59.775 41.667 0.00 0.00 0.00 3.41
181 186 7.147966 GGTTTTTATCGGGTATCCACTGATTTT 60.148 37.037 0.00 0.00 32.18 1.82
182 187 8.895737 GTTTTTATCGGGTATCCACTGATTTTA 58.104 33.333 0.00 0.00 32.18 1.52
183 188 9.463902 TTTTTATCGGGTATCCACTGATTTTAA 57.536 29.630 0.00 0.00 32.18 1.52
184 189 8.441312 TTTATCGGGTATCCACTGATTTTAAC 57.559 34.615 0.00 0.00 32.18 2.01
185 190 5.423704 TCGGGTATCCACTGATTTTAACA 57.576 39.130 0.00 0.00 32.18 2.41
186 191 5.996644 TCGGGTATCCACTGATTTTAACAT 58.003 37.500 0.00 0.00 32.18 2.71
187 192 6.419791 TCGGGTATCCACTGATTTTAACATT 58.580 36.000 0.00 0.00 32.18 2.71
312 413 7.517343 TTGTCACACACATTGTACATTTTTG 57.483 32.000 0.00 0.00 35.67 2.44
313 414 6.625362 TGTCACACACATTGTACATTTTTGT 58.375 32.000 0.00 0.00 35.67 2.83
314 415 7.762382 TGTCACACACATTGTACATTTTTGTA 58.238 30.769 0.00 0.00 35.67 2.41
315 416 8.409371 TGTCACACACATTGTACATTTTTGTAT 58.591 29.630 0.00 0.00 35.67 2.29
316 417 9.885934 GTCACACACATTGTACATTTTTGTATA 57.114 29.630 0.00 0.00 35.67 1.47
317 418 9.885934 TCACACACATTGTACATTTTTGTATAC 57.114 29.630 0.00 0.00 35.67 1.47
318 419 8.836109 CACACACATTGTACATTTTTGTATACG 58.164 33.333 0.00 0.00 35.67 3.06
319 420 8.561212 ACACACATTGTACATTTTTGTATACGT 58.439 29.630 0.00 0.00 36.32 3.57
359 461 6.887376 TGCGTCTAACATCTTCAAATACTC 57.113 37.500 0.00 0.00 0.00 2.59
360 462 5.810587 TGCGTCTAACATCTTCAAATACTCC 59.189 40.000 0.00 0.00 0.00 3.85
361 463 5.234543 GCGTCTAACATCTTCAAATACTCCC 59.765 44.000 0.00 0.00 0.00 4.30
362 464 6.574350 CGTCTAACATCTTCAAATACTCCCT 58.426 40.000 0.00 0.00 0.00 4.20
363 465 6.697892 CGTCTAACATCTTCAAATACTCCCTC 59.302 42.308 0.00 0.00 0.00 4.30
364 466 7.416890 CGTCTAACATCTTCAAATACTCCCTCT 60.417 40.741 0.00 0.00 0.00 3.69
365 467 7.708752 GTCTAACATCTTCAAATACTCCCTCTG 59.291 40.741 0.00 0.00 0.00 3.35
366 468 6.380079 AACATCTTCAAATACTCCCTCTGT 57.620 37.500 0.00 0.00 0.00 3.41
367 469 5.983540 ACATCTTCAAATACTCCCTCTGTC 58.016 41.667 0.00 0.00 0.00 3.51
368 470 5.723887 ACATCTTCAAATACTCCCTCTGTCT 59.276 40.000 0.00 0.00 0.00 3.41
369 471 5.667539 TCTTCAAATACTCCCTCTGTCTG 57.332 43.478 0.00 0.00 0.00 3.51
370 472 5.333581 TCTTCAAATACTCCCTCTGTCTGA 58.666 41.667 0.00 0.00 0.00 3.27
371 473 5.780282 TCTTCAAATACTCCCTCTGTCTGAA 59.220 40.000 0.00 0.00 0.00 3.02
372 474 6.270000 TCTTCAAATACTCCCTCTGTCTGAAA 59.730 38.462 0.00 0.00 0.00 2.69
373 475 6.433847 TCAAATACTCCCTCTGTCTGAAAA 57.566 37.500 0.00 0.00 0.00 2.29
374 476 7.020827 TCAAATACTCCCTCTGTCTGAAAAT 57.979 36.000 0.00 0.00 0.00 1.82
375 477 8.146053 TCAAATACTCCCTCTGTCTGAAAATA 57.854 34.615 0.00 0.00 0.00 1.40
376 478 8.041323 TCAAATACTCCCTCTGTCTGAAAATAC 58.959 37.037 0.00 0.00 0.00 1.89
377 479 7.741554 AATACTCCCTCTGTCTGAAAATACT 57.258 36.000 0.00 0.00 0.00 2.12
378 480 7.741554 ATACTCCCTCTGTCTGAAAATACTT 57.258 36.000 0.00 0.00 0.00 2.24
379 481 8.840200 ATACTCCCTCTGTCTGAAAATACTTA 57.160 34.615 0.00 0.00 0.00 2.24
380 482 7.741554 ACTCCCTCTGTCTGAAAATACTTAT 57.258 36.000 0.00 0.00 0.00 1.73
381 483 7.787028 ACTCCCTCTGTCTGAAAATACTTATC 58.213 38.462 0.00 0.00 0.00 1.75
382 484 7.125792 TCCCTCTGTCTGAAAATACTTATCC 57.874 40.000 0.00 0.00 0.00 2.59
383 485 6.099845 TCCCTCTGTCTGAAAATACTTATCCC 59.900 42.308 0.00 0.00 0.00 3.85
384 486 6.126768 CCCTCTGTCTGAAAATACTTATCCCA 60.127 42.308 0.00 0.00 0.00 4.37
385 487 7.338710 CCTCTGTCTGAAAATACTTATCCCAA 58.661 38.462 0.00 0.00 0.00 4.12
386 488 7.497249 CCTCTGTCTGAAAATACTTATCCCAAG 59.503 40.741 0.00 0.00 0.00 3.61
387 489 8.146053 TCTGTCTGAAAATACTTATCCCAAGA 57.854 34.615 0.00 0.00 0.00 3.02
388 490 8.602424 TCTGTCTGAAAATACTTATCCCAAGAA 58.398 33.333 0.00 0.00 0.00 2.52
389 491 9.401058 CTGTCTGAAAATACTTATCCCAAGAAT 57.599 33.333 0.00 0.00 0.00 2.40
390 492 9.177608 TGTCTGAAAATACTTATCCCAAGAATG 57.822 33.333 0.00 0.00 0.00 2.67
391 493 8.131731 GTCTGAAAATACTTATCCCAAGAATGC 58.868 37.037 0.00 0.00 0.00 3.56
392 494 7.833682 TCTGAAAATACTTATCCCAAGAATGCA 59.166 33.333 0.00 0.00 0.00 3.96
393 495 8.537728 TGAAAATACTTATCCCAAGAATGCAT 57.462 30.769 0.00 0.00 0.00 3.96
394 496 9.639563 TGAAAATACTTATCCCAAGAATGCATA 57.360 29.630 0.00 0.00 0.00 3.14
401 503 8.206189 ACTTATCCCAAGAATGCATAAAAATGG 58.794 33.333 0.00 4.84 0.00 3.16
402 504 6.811634 ATCCCAAGAATGCATAAAAATGGA 57.188 33.333 14.83 10.79 0.00 3.41
403 505 6.811634 TCCCAAGAATGCATAAAAATGGAT 57.188 33.333 14.83 0.00 33.93 3.41
404 506 6.584488 TCCCAAGAATGCATAAAAATGGATG 58.416 36.000 14.83 3.91 32.82 3.51
405 507 6.156602 TCCCAAGAATGCATAAAAATGGATGT 59.843 34.615 14.83 0.00 32.82 3.06
406 508 7.344093 TCCCAAGAATGCATAAAAATGGATGTA 59.656 33.333 14.83 0.00 32.82 2.29
407 509 8.152246 CCCAAGAATGCATAAAAATGGATGTAT 58.848 33.333 14.83 0.00 32.82 2.29
408 510 9.199982 CCAAGAATGCATAAAAATGGATGTATC 57.800 33.333 0.00 0.00 32.82 2.24
409 511 9.976511 CAAGAATGCATAAAAATGGATGTATCT 57.023 29.630 0.00 0.00 32.82 1.98
444 546 6.865834 ATGTCTAGATACATCCATTCCTCC 57.134 41.667 0.00 0.00 35.08 4.30
445 547 4.767409 TGTCTAGATACATCCATTCCTCCG 59.233 45.833 0.00 0.00 0.00 4.63
446 548 5.010933 GTCTAGATACATCCATTCCTCCGA 58.989 45.833 0.00 0.00 0.00 4.55
447 549 5.010933 TCTAGATACATCCATTCCTCCGAC 58.989 45.833 0.00 0.00 0.00 4.79
448 550 3.576861 AGATACATCCATTCCTCCGACA 58.423 45.455 0.00 0.00 0.00 4.35
449 551 3.967326 AGATACATCCATTCCTCCGACAA 59.033 43.478 0.00 0.00 0.00 3.18
450 552 2.698855 ACATCCATTCCTCCGACAAG 57.301 50.000 0.00 0.00 0.00 3.16
451 553 1.909302 ACATCCATTCCTCCGACAAGT 59.091 47.619 0.00 0.00 0.00 3.16
452 554 3.104512 ACATCCATTCCTCCGACAAGTA 58.895 45.455 0.00 0.00 0.00 2.24
453 555 3.711704 ACATCCATTCCTCCGACAAGTAT 59.288 43.478 0.00 0.00 0.00 2.12
454 556 4.164221 ACATCCATTCCTCCGACAAGTATT 59.836 41.667 0.00 0.00 0.00 1.89
455 557 4.837093 TCCATTCCTCCGACAAGTATTT 57.163 40.909 0.00 0.00 0.00 1.40
456 558 4.766375 TCCATTCCTCCGACAAGTATTTC 58.234 43.478 0.00 0.00 0.00 2.17
457 559 3.877508 CCATTCCTCCGACAAGTATTTCC 59.122 47.826 0.00 0.00 0.00 3.13
458 560 2.953466 TCCTCCGACAAGTATTTCCG 57.047 50.000 0.00 0.00 0.00 4.30
459 561 1.479323 TCCTCCGACAAGTATTTCCGG 59.521 52.381 0.00 0.00 41.36 5.14
460 562 1.479323 CCTCCGACAAGTATTTCCGGA 59.521 52.381 0.00 0.00 45.74 5.14
461 563 2.537401 CTCCGACAAGTATTTCCGGAC 58.463 52.381 1.83 0.00 43.47 4.79
462 564 1.135315 TCCGACAAGTATTTCCGGACG 60.135 52.381 1.83 0.00 43.47 4.79
463 565 1.274596 CGACAAGTATTTCCGGACGG 58.725 55.000 1.83 3.96 0.00 4.79
464 566 1.135315 CGACAAGTATTTCCGGACGGA 60.135 52.381 1.83 9.76 43.52 4.69
480 582 4.497674 CGGACGGAAGGAGTACAAGATTAG 60.498 50.000 0.00 0.00 0.00 1.73
483 585 4.406003 ACGGAAGGAGTACAAGATTAGCAT 59.594 41.667 0.00 0.00 0.00 3.79
487 589 7.475840 GGAAGGAGTACAAGATTAGCATTTTG 58.524 38.462 0.00 0.00 31.95 2.44
745 851 6.148948 TGTATGACAATTTCAAAAAGCCTCG 58.851 36.000 0.00 0.00 37.92 4.63
746 852 4.647424 TGACAATTTCAAAAAGCCTCGT 57.353 36.364 0.00 0.00 0.00 4.18
784 890 8.587950 TGAAACACACGAACATTTTTGAAATAC 58.412 29.630 0.00 0.00 0.00 1.89
788 894 6.473778 CACACGAACATTTTTGAAATACCACA 59.526 34.615 0.00 0.00 0.00 4.17
790 896 7.168972 ACACGAACATTTTTGAAATACCACATG 59.831 33.333 0.00 0.00 0.00 3.21
808 914 7.967178 ACCACATGTTAACTAAACTATAACGC 58.033 34.615 7.22 0.00 38.99 4.84
809 915 7.820872 ACCACATGTTAACTAAACTATAACGCT 59.179 33.333 7.22 0.00 38.99 5.07
811 917 8.865978 CACATGTTAACTAAACTATAACGCTGA 58.134 33.333 7.22 0.00 38.99 4.26
812 918 8.866956 ACATGTTAACTAAACTATAACGCTGAC 58.133 33.333 7.22 0.00 38.99 3.51
813 919 7.496704 TGTTAACTAAACTATAACGCTGACG 57.503 36.000 7.22 0.00 41.28 4.35
857 1171 4.397832 GGCTAACGGCACCGGGAA 62.398 66.667 14.51 0.00 44.69 3.97
858 1172 2.818274 GCTAACGGCACCGGGAAG 60.818 66.667 14.51 8.43 44.69 3.46
860 1174 3.599285 CTAACGGCACCGGGAAGCA 62.599 63.158 14.51 0.00 44.69 3.91
861 1175 3.887335 TAACGGCACCGGGAAGCAC 62.887 63.158 14.51 0.56 44.69 4.40
871 1185 2.671682 GGAAGCACCCTCCTCACC 59.328 66.667 0.00 0.00 0.00 4.02
872 1186 2.266055 GAAGCACCCTCCTCACCG 59.734 66.667 0.00 0.00 0.00 4.94
902 1216 0.608035 TCCGAGCCAACCAACCAATC 60.608 55.000 0.00 0.00 0.00 2.67
992 1328 2.113774 CACAGGCAGGCAGTCCAA 59.886 61.111 0.00 0.00 33.74 3.53
994 1330 2.149383 ACAGGCAGGCAGTCCAAGA 61.149 57.895 0.00 0.00 33.74 3.02
1065 1401 4.548513 CTCCCCTCCCTCTCCCGG 62.549 77.778 0.00 0.00 0.00 5.73
1357 1710 1.533219 CCCAGGTATGCATGCTGGA 59.467 57.895 24.37 1.42 37.37 3.86
1382 1747 2.821679 TTCGCTCTCGCCTCCTCTCA 62.822 60.000 0.00 0.00 35.26 3.27
1470 1854 2.981302 CAGGACATCACGCTCCCA 59.019 61.111 0.00 0.00 0.00 4.37
1519 1907 2.509561 GCCTTTCTCGGCCTCGTC 60.510 66.667 0.00 0.00 44.41 4.20
1520 1908 2.202623 CCTTTCTCGGCCTCGTCG 60.203 66.667 0.00 0.00 37.69 5.12
1521 1909 2.567049 CTTTCTCGGCCTCGTCGT 59.433 61.111 0.00 0.00 37.69 4.34
1522 1910 1.514443 CTTTCTCGGCCTCGTCGTC 60.514 63.158 0.00 0.00 37.69 4.20
1537 1925 2.478031 CGTCGTCCGTCTCATTCTCATT 60.478 50.000 0.00 0.00 0.00 2.57
1538 1926 2.854777 GTCGTCCGTCTCATTCTCATTG 59.145 50.000 0.00 0.00 0.00 2.82
1540 1928 3.056821 TCGTCCGTCTCATTCTCATTGTT 60.057 43.478 0.00 0.00 0.00 2.83
1541 1929 3.304559 CGTCCGTCTCATTCTCATTGTTC 59.695 47.826 0.00 0.00 0.00 3.18
1543 1931 4.328440 GTCCGTCTCATTCTCATTGTTCAG 59.672 45.833 0.00 0.00 0.00 3.02
1552 1940 5.963176 TTCTCATTGTTCAGCAATTAGCA 57.037 34.783 3.32 0.00 44.82 3.49
1560 1948 8.136267 ATTGTTCAGCAATTAGCACCAACTGT 62.136 38.462 3.32 0.00 44.82 3.55
1564 1952 4.766404 GCAATTAGCACCAACTGTAACT 57.234 40.909 0.00 0.00 44.79 2.24
1565 1953 5.873179 GCAATTAGCACCAACTGTAACTA 57.127 39.130 0.00 0.00 44.79 2.24
1566 1954 6.436843 GCAATTAGCACCAACTGTAACTAT 57.563 37.500 0.00 0.00 44.79 2.12
1567 1955 6.487103 GCAATTAGCACCAACTGTAACTATC 58.513 40.000 0.00 0.00 44.79 2.08
1568 1956 6.316390 GCAATTAGCACCAACTGTAACTATCT 59.684 38.462 0.00 0.00 44.79 1.98
1569 1957 7.494625 GCAATTAGCACCAACTGTAACTATCTA 59.505 37.037 0.00 0.00 44.79 1.98
1574 1962 7.210873 AGCACCAACTGTAACTATCTATAAGC 58.789 38.462 0.00 0.00 0.00 3.09
1575 1963 6.984474 GCACCAACTGTAACTATCTATAAGCA 59.016 38.462 0.00 0.00 0.00 3.91
1576 1964 7.494625 GCACCAACTGTAACTATCTATAAGCAA 59.505 37.037 0.00 0.00 0.00 3.91
1577 1965 8.818057 CACCAACTGTAACTATCTATAAGCAAC 58.182 37.037 0.00 0.00 0.00 4.17
1584 1972 9.740239 TGTAACTATCTATAAGCAACTAAACCG 57.260 33.333 0.00 0.00 0.00 4.44
1588 1976 9.909644 ACTATCTATAAGCAACTAAACCGTATG 57.090 33.333 0.00 0.00 0.00 2.39
1589 1977 7.653767 ATCTATAAGCAACTAAACCGTATGC 57.346 36.000 0.00 0.00 37.28 3.14
1592 1980 3.053831 AGCAACTAAACCGTATGCTGT 57.946 42.857 0.00 0.00 45.03 4.40
1593 1981 3.408634 AGCAACTAAACCGTATGCTGTT 58.591 40.909 0.00 0.00 45.03 3.16
1594 1982 3.435671 AGCAACTAAACCGTATGCTGTTC 59.564 43.478 0.00 0.00 45.03 3.18
1595 1983 3.425758 GCAACTAAACCGTATGCTGTTCC 60.426 47.826 0.00 0.00 34.29 3.62
1596 1984 3.688694 ACTAAACCGTATGCTGTTCCA 57.311 42.857 0.00 0.00 0.00 3.53
1597 1985 3.332034 ACTAAACCGTATGCTGTTCCAC 58.668 45.455 0.00 0.00 0.00 4.02
1598 1986 2.561478 AAACCGTATGCTGTTCCACT 57.439 45.000 0.00 0.00 0.00 4.00
1599 1987 2.094762 AACCGTATGCTGTTCCACTC 57.905 50.000 0.00 0.00 0.00 3.51
1600 1988 1.267121 ACCGTATGCTGTTCCACTCT 58.733 50.000 0.00 0.00 0.00 3.24
1601 1989 1.066858 ACCGTATGCTGTTCCACTCTG 60.067 52.381 0.00 0.00 0.00 3.35
1602 1990 1.066858 CCGTATGCTGTTCCACTCTGT 60.067 52.381 0.00 0.00 0.00 3.41
1603 1991 2.263077 CGTATGCTGTTCCACTCTGTC 58.737 52.381 0.00 0.00 0.00 3.51
1604 1992 2.094494 CGTATGCTGTTCCACTCTGTCT 60.094 50.000 0.00 0.00 0.00 3.41
1605 1993 3.128764 CGTATGCTGTTCCACTCTGTCTA 59.871 47.826 0.00 0.00 0.00 2.59
1606 1994 4.380550 CGTATGCTGTTCCACTCTGTCTAA 60.381 45.833 0.00 0.00 0.00 2.10
1607 1995 4.833478 ATGCTGTTCCACTCTGTCTAAT 57.167 40.909 0.00 0.00 0.00 1.73
1608 1996 4.193826 TGCTGTTCCACTCTGTCTAATC 57.806 45.455 0.00 0.00 0.00 1.75
1609 1997 3.834813 TGCTGTTCCACTCTGTCTAATCT 59.165 43.478 0.00 0.00 0.00 2.40
1610 1998 4.081972 TGCTGTTCCACTCTGTCTAATCTC 60.082 45.833 0.00 0.00 0.00 2.75
1611 1999 4.081972 GCTGTTCCACTCTGTCTAATCTCA 60.082 45.833 0.00 0.00 0.00 3.27
1617 2005 3.610242 CACTCTGTCTAATCTCACGCAAC 59.390 47.826 0.00 0.00 0.00 4.17
1636 2024 3.981071 ACTGGTTGCTGATTAGTGCTA 57.019 42.857 0.00 0.00 0.00 3.49
1638 2026 4.848357 ACTGGTTGCTGATTAGTGCTATT 58.152 39.130 0.00 0.00 0.00 1.73
1640 2028 4.842574 TGGTTGCTGATTAGTGCTATTGA 58.157 39.130 0.00 0.00 0.00 2.57
1642 2030 5.887598 TGGTTGCTGATTAGTGCTATTGATT 59.112 36.000 0.00 0.00 0.00 2.57
1643 2031 6.377996 TGGTTGCTGATTAGTGCTATTGATTT 59.622 34.615 0.00 0.00 0.00 2.17
1645 2033 7.761249 GGTTGCTGATTAGTGCTATTGATTTTT 59.239 33.333 0.00 0.00 0.00 1.94
1656 2044 7.816031 AGTGCTATTGATTTTTCCAATCAGTTG 59.184 33.333 0.00 0.00 37.86 3.16
1664 2052 3.698765 CAATCAGTTGGGGGTGCC 58.301 61.111 0.00 0.00 0.00 5.01
1665 2053 1.228831 CAATCAGTTGGGGGTGCCA 60.229 57.895 0.00 0.00 0.00 4.92
1666 2054 0.831288 CAATCAGTTGGGGGTGCCAA 60.831 55.000 0.00 0.00 0.00 4.52
1667 2055 0.105246 AATCAGTTGGGGGTGCCAAA 60.105 50.000 0.00 0.00 0.00 3.28
1668 2056 0.831711 ATCAGTTGGGGGTGCCAAAC 60.832 55.000 0.00 0.00 0.00 2.93
1669 2057 1.457455 CAGTTGGGGGTGCCAAACT 60.457 57.895 0.00 0.00 33.96 2.66
1670 2058 1.457455 AGTTGGGGGTGCCAAACTG 60.457 57.895 0.00 0.00 32.96 3.16
1671 2059 2.841988 TTGGGGGTGCCAAACTGC 60.842 61.111 0.00 0.00 0.00 4.40
1672 2060 3.387609 TTGGGGGTGCCAAACTGCT 62.388 57.895 0.00 0.00 0.00 4.24
1673 2061 2.524148 GGGGGTGCCAAACTGCTT 60.524 61.111 0.00 0.00 0.00 3.91
1674 2062 1.228737 GGGGGTGCCAAACTGCTTA 60.229 57.895 0.00 0.00 0.00 3.09
1678 2066 1.269723 GGGTGCCAAACTGCTTACTTC 59.730 52.381 0.00 0.00 0.00 3.01
1686 2074 4.249661 CAAACTGCTTACTTCTCCCTCTC 58.750 47.826 0.00 0.00 0.00 3.20
1687 2075 3.176924 ACTGCTTACTTCTCCCTCTCA 57.823 47.619 0.00 0.00 0.00 3.27
1690 2078 3.093057 TGCTTACTTCTCCCTCTCACTC 58.907 50.000 0.00 0.00 0.00 3.51
1693 2081 0.251386 ACTTCTCCCTCTCACTCGCA 60.251 55.000 0.00 0.00 0.00 5.10
1695 2083 0.820226 TTCTCCCTCTCACTCGCATG 59.180 55.000 0.00 0.00 0.00 4.06
1696 2089 1.039785 TCTCCCTCTCACTCGCATGG 61.040 60.000 0.00 0.00 0.00 3.66
1702 2095 1.227205 CTCACTCGCATGGCCTCTC 60.227 63.158 3.32 0.00 0.00 3.20
1742 2135 8.029522 TGATGTACTAGAAAAGCTACTGAGTTG 58.970 37.037 0.00 0.00 0.00 3.16
1758 2151 5.195001 TGAGTTGGGAAATTTGTGCTAAC 57.805 39.130 0.00 0.00 31.69 2.34
1772 2165 0.890996 GCTAACCAGGTTGCTGCACT 60.891 55.000 15.82 0.00 0.00 4.40
1860 2253 4.349930 ACTTAAGAGAGCAGGTAAACCCAA 59.650 41.667 10.09 0.00 36.42 4.12
1864 2257 4.740902 AGAGAGCAGGTAAACCCAATTTT 58.259 39.130 0.00 0.00 36.42 1.82
1900 2296 5.070685 GGGTTCTTCATGTTCCTTACTGTT 58.929 41.667 0.00 0.00 0.00 3.16
1903 2299 7.393515 GGGTTCTTCATGTTCCTTACTGTTAAT 59.606 37.037 0.00 0.00 0.00 1.40
1938 2338 5.060506 CGGTACTGCAATTATTGTCCCATA 58.939 41.667 6.81 0.00 0.00 2.74
1939 2339 5.049680 CGGTACTGCAATTATTGTCCCATAC 60.050 44.000 6.81 3.48 0.00 2.39
1942 2342 5.133221 ACTGCAATTATTGTCCCATACTCC 58.867 41.667 6.81 0.00 0.00 3.85
1943 2343 4.469657 TGCAATTATTGTCCCATACTCCC 58.530 43.478 6.81 0.00 0.00 4.30
1945 2345 5.079643 GCAATTATTGTCCCATACTCCCAT 58.920 41.667 6.81 0.00 0.00 4.00
1946 2346 5.047802 GCAATTATTGTCCCATACTCCCATG 60.048 44.000 6.81 0.00 0.00 3.66
1947 2347 6.306199 CAATTATTGTCCCATACTCCCATGA 58.694 40.000 0.00 0.00 0.00 3.07
1948 2348 6.725101 ATTATTGTCCCATACTCCCATGAT 57.275 37.500 0.00 0.00 0.00 2.45
1949 2349 4.647564 ATTGTCCCATACTCCCATGATC 57.352 45.455 0.00 0.00 0.00 2.92
1950 2350 2.338809 TGTCCCATACTCCCATGATCC 58.661 52.381 0.00 0.00 0.00 3.36
1951 2351 1.276421 GTCCCATACTCCCATGATCCG 59.724 57.143 0.00 0.00 0.00 4.18
1952 2352 1.149077 TCCCATACTCCCATGATCCGA 59.851 52.381 0.00 0.00 0.00 4.55
1953 2353 2.191400 CCCATACTCCCATGATCCGAT 58.809 52.381 0.00 0.00 0.00 4.18
1955 2355 3.369892 CCCATACTCCCATGATCCGATTC 60.370 52.174 0.00 0.00 0.00 2.52
1962 2362 5.780282 ACTCCCATGATCCGATTCAGTTATA 59.220 40.000 0.00 0.00 0.00 0.98
1971 2375 7.381408 TGATCCGATTCAGTTATATCGTTTGTC 59.619 37.037 0.00 0.00 41.44 3.18
1973 2377 6.916387 TCCGATTCAGTTATATCGTTTGTCTC 59.084 38.462 0.00 0.00 41.44 3.36
1979 2383 1.206745 ATATCGTTTGTCTCCGCGCG 61.207 55.000 25.67 25.67 0.00 6.86
1998 2407 1.235724 GGCAACTGGGTTACTGTCAC 58.764 55.000 0.00 0.00 0.00 3.67
2000 2409 1.602377 GCAACTGGGTTACTGTCACAC 59.398 52.381 0.00 0.00 0.00 3.82
2007 2453 2.289195 GGGTTACTGTCACACGATCCAA 60.289 50.000 0.00 0.00 0.00 3.53
2012 2458 3.329386 ACTGTCACACGATCCAATTCAG 58.671 45.455 0.00 0.00 0.00 3.02
2031 2477 3.986572 TCAGTTTTACCATTTGCATTGCG 59.013 39.130 3.84 0.00 0.00 4.85
2032 2478 3.123284 CAGTTTTACCATTTGCATTGCGG 59.877 43.478 3.84 1.41 0.00 5.69
2033 2479 3.063485 GTTTTACCATTTGCATTGCGGT 58.937 40.909 10.25 10.25 0.00 5.68
2034 2480 4.021894 AGTTTTACCATTTGCATTGCGGTA 60.022 37.500 8.53 8.53 0.00 4.02
2035 2481 4.521130 TTTACCATTTGCATTGCGGTAA 57.479 36.364 16.97 16.97 39.76 2.85
2036 2482 4.727507 TTACCATTTGCATTGCGGTAAT 57.272 36.364 16.97 8.88 37.30 1.89
2037 2483 3.163630 ACCATTTGCATTGCGGTAATC 57.836 42.857 3.84 0.00 0.00 1.75
2038 2484 2.495270 ACCATTTGCATTGCGGTAATCA 59.505 40.909 3.84 0.00 0.00 2.57
2042 2488 1.093972 TGCATTGCGGTAATCAGTGG 58.906 50.000 3.84 0.00 0.00 4.00
2044 2490 1.202177 GCATTGCGGTAATCAGTGGTG 60.202 52.381 0.00 0.00 0.00 4.17
2048 2494 2.172679 TGCGGTAATCAGTGGTGAGTA 58.827 47.619 0.00 0.00 35.66 2.59
2061 2508 1.779569 GTGAGTACACCTGTTGGACG 58.220 55.000 0.00 0.00 44.99 4.79
2067 2523 0.179032 ACACCTGTTGGACGAATGCA 60.179 50.000 0.00 0.00 37.04 3.96
2070 2526 1.271325 ACCTGTTGGACGAATGCATCA 60.271 47.619 0.00 0.00 37.04 3.07
2080 2536 3.674997 ACGAATGCATCACAGTAACCTT 58.325 40.909 0.00 0.00 0.00 3.50
2083 2539 5.703592 ACGAATGCATCACAGTAACCTTTTA 59.296 36.000 0.00 0.00 0.00 1.52
2139 2595 5.836898 TCTGAGTAGTTTGGAGAGGTTGTAA 59.163 40.000 0.00 0.00 0.00 2.41
2140 2596 5.850614 TGAGTAGTTTGGAGAGGTTGTAAC 58.149 41.667 0.00 0.00 0.00 2.50
2141 2597 5.601313 TGAGTAGTTTGGAGAGGTTGTAACT 59.399 40.000 0.00 0.00 0.00 2.24
2142 2598 6.099269 TGAGTAGTTTGGAGAGGTTGTAACTT 59.901 38.462 0.00 0.00 0.00 2.66
2143 2599 6.289064 AGTAGTTTGGAGAGGTTGTAACTTG 58.711 40.000 0.00 0.00 0.00 3.16
2192 2658 2.833794 TGGTGAGCAGTGACTTGTTAC 58.166 47.619 0.00 0.00 0.00 2.50
2205 2671 1.659098 CTTGTTACGACGGATCAAGGC 59.341 52.381 19.11 0.00 33.98 4.35
2268 2739 1.819928 TTGTCACATGAATCGGGTGG 58.180 50.000 0.00 0.00 33.45 4.61
2275 2746 0.250901 ATGAATCGGGTGGGCTATGC 60.251 55.000 0.00 0.00 0.00 3.14
2310 2790 1.072965 GGCCATATGCTACAGGCTTCT 59.927 52.381 0.00 0.00 46.23 2.85
2314 2794 4.454678 CCATATGCTACAGGCTTCTTGAA 58.545 43.478 0.00 0.00 42.39 2.69
2315 2795 5.068636 CCATATGCTACAGGCTTCTTGAAT 58.931 41.667 0.00 0.00 42.39 2.57
2347 2827 6.061441 TGATTCTACCTCTGCAAACTGAAAA 58.939 36.000 0.00 0.00 0.00 2.29
2348 2828 6.545666 TGATTCTACCTCTGCAAACTGAAAAA 59.454 34.615 0.00 0.00 0.00 1.94
2452 2932 4.474226 AGTTGAAACGCAAGATGAAGAC 57.526 40.909 0.00 0.00 37.12 3.01
2478 2958 3.729163 GCAAGCAATTCTCTTAAGACGCC 60.729 47.826 0.00 0.00 0.00 5.68
2479 2959 2.633488 AGCAATTCTCTTAAGACGCCC 58.367 47.619 0.00 0.00 0.00 6.13
2480 2960 2.237392 AGCAATTCTCTTAAGACGCCCT 59.763 45.455 0.00 0.00 0.00 5.19
2482 2962 4.081087 AGCAATTCTCTTAAGACGCCCTAA 60.081 41.667 0.00 0.00 0.00 2.69
2489 2969 6.708285 TCTCTTAAGACGCCCTAAGAATTTT 58.292 36.000 0.00 0.00 0.00 1.82
2490 2970 6.817140 TCTCTTAAGACGCCCTAAGAATTTTC 59.183 38.462 0.00 0.00 0.00 2.29
2757 3237 4.441634 CGACCCGTCTTTCTATTTCAGGAT 60.442 45.833 0.00 0.00 0.00 3.24
2836 3316 3.159213 TGGAGCCATCACAAACTTGAT 57.841 42.857 0.00 0.00 36.62 2.57
2837 3317 3.499338 TGGAGCCATCACAAACTTGATT 58.501 40.909 0.00 0.00 33.74 2.57
2838 3318 3.256383 TGGAGCCATCACAAACTTGATTG 59.744 43.478 0.00 0.00 33.74 2.67
2839 3319 3.507233 GGAGCCATCACAAACTTGATTGA 59.493 43.478 0.00 0.00 33.74 2.57
2840 3320 4.479619 GAGCCATCACAAACTTGATTGAC 58.520 43.478 0.00 0.00 33.74 3.18
3184 3665 4.559862 ATCTTGAGTGGAACGAAAGGAT 57.440 40.909 0.00 0.00 45.86 3.24
3185 3666 3.926616 TCTTGAGTGGAACGAAAGGATC 58.073 45.455 0.00 0.00 45.86 3.36
3207 3688 1.601759 GCTTCTGGCTGTGAAGGCA 60.602 57.895 13.91 1.82 40.70 4.75
3219 3700 0.756294 TGAAGGCAGGACGTTTCAGA 59.244 50.000 0.00 0.00 0.00 3.27
3297 3781 6.403049 TGTGGTCGACAACATACATTTCTAT 58.597 36.000 21.95 0.00 0.00 1.98
3421 3927 1.139058 ACGGTGCTCATCCTTGGATAC 59.861 52.381 1.37 0.00 0.00 2.24
3528 4034 4.277174 TGGTTCAACGATGCATTACAAACT 59.723 37.500 0.00 0.00 0.00 2.66
3595 4101 3.134574 TGGTGACACAAGTAATCCACC 57.865 47.619 8.08 0.00 43.07 4.61
3596 4102 2.073816 GGTGACACAAGTAATCCACCG 58.926 52.381 8.08 0.00 35.36 4.94
3597 4103 2.289195 GGTGACACAAGTAATCCACCGA 60.289 50.000 8.08 0.00 35.36 4.69
3598 4104 3.395639 GTGACACAAGTAATCCACCGAA 58.604 45.455 0.00 0.00 0.00 4.30
3599 4105 3.432252 GTGACACAAGTAATCCACCGAAG 59.568 47.826 0.00 0.00 0.00 3.79
3600 4106 2.415512 GACACAAGTAATCCACCGAAGC 59.584 50.000 0.00 0.00 0.00 3.86
3601 4107 2.224426 ACACAAGTAATCCACCGAAGCA 60.224 45.455 0.00 0.00 0.00 3.91
3602 4108 2.811431 CACAAGTAATCCACCGAAGCAA 59.189 45.455 0.00 0.00 0.00 3.91
3603 4109 3.074412 ACAAGTAATCCACCGAAGCAAG 58.926 45.455 0.00 0.00 0.00 4.01
3604 4110 3.244422 ACAAGTAATCCACCGAAGCAAGA 60.244 43.478 0.00 0.00 0.00 3.02
3605 4111 3.252974 AGTAATCCACCGAAGCAAGAG 57.747 47.619 0.00 0.00 0.00 2.85
3606 4112 2.832129 AGTAATCCACCGAAGCAAGAGA 59.168 45.455 0.00 0.00 0.00 3.10
3607 4113 3.452627 AGTAATCCACCGAAGCAAGAGAT 59.547 43.478 0.00 0.00 0.00 2.75
3608 4114 4.649674 AGTAATCCACCGAAGCAAGAGATA 59.350 41.667 0.00 0.00 0.00 1.98
3609 4115 4.696479 AATCCACCGAAGCAAGAGATAT 57.304 40.909 0.00 0.00 0.00 1.63
3610 4116 5.808366 AATCCACCGAAGCAAGAGATATA 57.192 39.130 0.00 0.00 0.00 0.86
3611 4117 6.365970 AATCCACCGAAGCAAGAGATATAT 57.634 37.500 0.00 0.00 0.00 0.86
3612 4118 7.482169 AATCCACCGAAGCAAGAGATATATA 57.518 36.000 0.00 0.00 0.00 0.86
3613 4119 6.516739 TCCACCGAAGCAAGAGATATATAG 57.483 41.667 0.00 0.00 0.00 1.31
3614 4120 5.105716 TCCACCGAAGCAAGAGATATATAGC 60.106 44.000 0.00 0.00 0.00 2.97
3615 4121 5.336770 CCACCGAAGCAAGAGATATATAGCA 60.337 44.000 0.07 0.00 0.00 3.49
3616 4122 5.804473 CACCGAAGCAAGAGATATATAGCAG 59.196 44.000 0.07 0.00 0.00 4.24
3617 4123 5.478679 ACCGAAGCAAGAGATATATAGCAGT 59.521 40.000 0.07 0.00 0.00 4.40
3618 4124 6.033341 CCGAAGCAAGAGATATATAGCAGTC 58.967 44.000 0.07 0.00 0.00 3.51
3619 4125 6.127758 CCGAAGCAAGAGATATATAGCAGTCT 60.128 42.308 0.07 0.00 0.00 3.24
3620 4126 7.066404 CCGAAGCAAGAGATATATAGCAGTCTA 59.934 40.741 0.07 0.00 0.00 2.59
3621 4127 8.454894 CGAAGCAAGAGATATATAGCAGTCTAA 58.545 37.037 0.07 0.00 0.00 2.10
3622 4128 9.787532 GAAGCAAGAGATATATAGCAGTCTAAG 57.212 37.037 0.07 0.00 0.00 2.18
3623 4129 9.527157 AAGCAAGAGATATATAGCAGTCTAAGA 57.473 33.333 0.07 0.00 0.00 2.10
3624 4130 9.527157 AGCAAGAGATATATAGCAGTCTAAGAA 57.473 33.333 0.07 0.00 0.00 2.52
3625 4131 9.787532 GCAAGAGATATATAGCAGTCTAAGAAG 57.212 37.037 0.07 0.00 0.00 2.85
3635 4141 6.603940 AGCAGTCTAAGAAGAAGATGAACT 57.396 37.500 0.00 0.00 32.16 3.01
3636 4142 7.710676 AGCAGTCTAAGAAGAAGATGAACTA 57.289 36.000 0.00 0.00 32.16 2.24
3637 4143 8.305046 AGCAGTCTAAGAAGAAGATGAACTAT 57.695 34.615 0.00 0.00 32.16 2.12
3638 4144 9.415008 AGCAGTCTAAGAAGAAGATGAACTATA 57.585 33.333 0.00 0.00 32.16 1.31
3639 4145 9.458374 GCAGTCTAAGAAGAAGATGAACTATAC 57.542 37.037 0.00 0.00 32.16 1.47
3644 4150 9.743057 CTAAGAAGAAGATGAACTATACACAGG 57.257 37.037 0.00 0.00 0.00 4.00
3645 4151 7.962995 AGAAGAAGATGAACTATACACAGGA 57.037 36.000 0.00 0.00 0.00 3.86
3646 4152 8.546083 AGAAGAAGATGAACTATACACAGGAT 57.454 34.615 0.00 0.00 0.00 3.24
3647 4153 8.986991 AGAAGAAGATGAACTATACACAGGATT 58.013 33.333 0.00 0.00 0.00 3.01
3648 4154 8.954950 AAGAAGATGAACTATACACAGGATTG 57.045 34.615 0.00 0.00 0.00 2.67
3649 4155 8.311395 AGAAGATGAACTATACACAGGATTGA 57.689 34.615 0.00 0.00 0.00 2.57
3650 4156 8.420222 AGAAGATGAACTATACACAGGATTGAG 58.580 37.037 0.00 0.00 0.00 3.02
3651 4157 7.904558 AGATGAACTATACACAGGATTGAGA 57.095 36.000 0.00 0.00 0.00 3.27
3652 4158 8.311395 AGATGAACTATACACAGGATTGAGAA 57.689 34.615 0.00 0.00 0.00 2.87
3653 4159 8.932610 AGATGAACTATACACAGGATTGAGAAT 58.067 33.333 0.00 0.00 0.00 2.40
3654 4160 9.553064 GATGAACTATACACAGGATTGAGAATT 57.447 33.333 0.00 0.00 0.00 2.17
3655 4161 9.911788 ATGAACTATACACAGGATTGAGAATTT 57.088 29.630 0.00 0.00 0.00 1.82
3656 4162 9.739276 TGAACTATACACAGGATTGAGAATTTT 57.261 29.630 0.00 0.00 0.00 1.82
3663 4169 8.877864 ACACAGGATTGAGAATTTTTATACCA 57.122 30.769 0.00 0.00 0.00 3.25
3664 4170 8.739972 ACACAGGATTGAGAATTTTTATACCAC 58.260 33.333 0.00 0.00 0.00 4.16
3665 4171 8.960591 CACAGGATTGAGAATTTTTATACCACT 58.039 33.333 0.00 0.00 0.00 4.00
3676 4182 9.916397 GAATTTTTATACCACTACTGATTGACG 57.084 33.333 0.00 0.00 0.00 4.35
3677 4183 9.661563 AATTTTTATACCACTACTGATTGACGA 57.338 29.630 0.00 0.00 0.00 4.20
3678 4184 9.832445 ATTTTTATACCACTACTGATTGACGAT 57.168 29.630 0.00 0.00 0.00 3.73
3679 4185 8.642908 TTTTATACCACTACTGATTGACGATG 57.357 34.615 0.00 0.00 0.00 3.84
3680 4186 7.576861 TTATACCACTACTGATTGACGATGA 57.423 36.000 0.00 0.00 0.00 2.92
3681 4187 4.801330 ACCACTACTGATTGACGATGAA 57.199 40.909 0.00 0.00 0.00 2.57
3682 4188 5.147330 ACCACTACTGATTGACGATGAAA 57.853 39.130 0.00 0.00 0.00 2.69
3683 4189 4.929808 ACCACTACTGATTGACGATGAAAC 59.070 41.667 0.00 0.00 0.00 2.78
3684 4190 4.929211 CCACTACTGATTGACGATGAAACA 59.071 41.667 0.00 0.00 0.00 2.83
3685 4191 5.582269 CCACTACTGATTGACGATGAAACAT 59.418 40.000 0.00 0.00 0.00 2.71
3686 4192 6.456047 CCACTACTGATTGACGATGAAACATG 60.456 42.308 0.00 0.00 0.00 3.21
3687 4193 4.346734 ACTGATTGACGATGAAACATGC 57.653 40.909 0.00 0.00 0.00 4.06
3688 4194 3.752747 ACTGATTGACGATGAAACATGCA 59.247 39.130 0.00 0.00 0.00 3.96
3689 4195 4.082274 TGATTGACGATGAAACATGCAC 57.918 40.909 0.00 0.00 0.00 4.57
3690 4196 2.592796 TTGACGATGAAACATGCACG 57.407 45.000 0.00 0.00 0.00 5.34
3691 4197 1.507562 TGACGATGAAACATGCACGT 58.492 45.000 0.00 0.00 36.71 4.49
3692 4198 1.194322 TGACGATGAAACATGCACGTG 59.806 47.619 12.28 12.28 34.26 4.49
3693 4199 1.194547 GACGATGAAACATGCACGTGT 59.805 47.619 18.38 0.00 34.26 4.49
3694 4200 1.194547 ACGATGAAACATGCACGTGTC 59.805 47.619 18.38 10.14 32.93 3.67
3695 4201 1.460743 CGATGAAACATGCACGTGTCT 59.539 47.619 18.38 1.39 0.00 3.41
3696 4202 2.096268 CGATGAAACATGCACGTGTCTT 60.096 45.455 18.38 0.00 0.00 3.01
3697 4203 3.606846 CGATGAAACATGCACGTGTCTTT 60.607 43.478 18.38 9.20 0.00 2.52
3698 4204 4.376920 CGATGAAACATGCACGTGTCTTTA 60.377 41.667 18.38 1.31 0.00 1.85
3699 4205 4.203950 TGAAACATGCACGTGTCTTTAC 57.796 40.909 18.38 0.00 0.00 2.01
3700 4206 3.623510 TGAAACATGCACGTGTCTTTACA 59.376 39.130 18.38 5.54 0.00 2.41
3715 4221 7.946655 TGTCTTTACACAGCTATATATGCAC 57.053 36.000 0.00 0.00 0.00 4.57
3716 4222 7.726216 TGTCTTTACACAGCTATATATGCACT 58.274 34.615 0.00 0.00 0.00 4.40
3717 4223 8.204160 TGTCTTTACACAGCTATATATGCACTT 58.796 33.333 0.00 0.00 0.00 3.16
3718 4224 8.491152 GTCTTTACACAGCTATATATGCACTTG 58.509 37.037 0.00 0.00 0.00 3.16
3719 4225 7.657354 TCTTTACACAGCTATATATGCACTTGG 59.343 37.037 0.00 0.00 0.00 3.61
3720 4226 4.067896 ACACAGCTATATATGCACTTGGC 58.932 43.478 0.00 0.00 45.13 4.52
3721 4227 4.202398 ACACAGCTATATATGCACTTGGCT 60.202 41.667 0.00 0.00 45.15 4.75
3722 4228 4.758674 CACAGCTATATATGCACTTGGCTT 59.241 41.667 0.00 0.00 45.15 4.35
3723 4229 5.934043 CACAGCTATATATGCACTTGGCTTA 59.066 40.000 0.00 0.00 45.15 3.09
3724 4230 6.427853 CACAGCTATATATGCACTTGGCTTAA 59.572 38.462 0.00 0.00 45.15 1.85
3725 4231 6.428159 ACAGCTATATATGCACTTGGCTTAAC 59.572 38.462 0.00 0.00 45.15 2.01
3726 4232 6.652481 CAGCTATATATGCACTTGGCTTAACT 59.348 38.462 0.00 0.00 45.15 2.24
3727 4233 7.819415 CAGCTATATATGCACTTGGCTTAACTA 59.181 37.037 0.00 0.00 45.15 2.24
3728 4234 8.037758 AGCTATATATGCACTTGGCTTAACTAG 58.962 37.037 0.00 0.00 45.15 2.57
3741 4247 5.819825 GCTTAACTAGCTACCAGCAATTT 57.180 39.130 0.38 0.00 45.56 1.82
3742 4248 6.920569 GCTTAACTAGCTACCAGCAATTTA 57.079 37.500 0.38 0.00 45.56 1.40
3743 4249 6.949449 GCTTAACTAGCTACCAGCAATTTAG 58.051 40.000 0.38 0.00 45.56 1.85
3744 4250 6.511929 GCTTAACTAGCTACCAGCAATTTAGC 60.512 42.308 0.38 0.00 45.56 3.09
3746 4252 4.698575 ACTAGCTACCAGCAATTTAGCTC 58.301 43.478 11.04 0.00 44.21 4.09
3747 4253 2.555199 AGCTACCAGCAATTTAGCTCG 58.445 47.619 3.28 0.00 44.21 5.03
3748 4254 2.093447 AGCTACCAGCAATTTAGCTCGT 60.093 45.455 3.28 0.00 44.21 4.18
3749 4255 2.030946 GCTACCAGCAATTTAGCTCGTG 59.969 50.000 0.00 0.00 44.54 4.35
3750 4256 2.185004 ACCAGCAATTTAGCTCGTGT 57.815 45.000 0.00 0.00 44.54 4.49
3751 4257 1.806542 ACCAGCAATTTAGCTCGTGTG 59.193 47.619 0.00 0.00 44.54 3.82
3752 4258 1.466360 CCAGCAATTTAGCTCGTGTGC 60.466 52.381 0.00 0.00 44.54 4.57
3753 4259 1.197492 CAGCAATTTAGCTCGTGTGCA 59.803 47.619 13.03 0.00 44.54 4.57
3754 4260 1.466167 AGCAATTTAGCTCGTGTGCAG 59.534 47.619 13.03 0.00 42.18 4.41
3755 4261 1.464608 GCAATTTAGCTCGTGTGCAGA 59.535 47.619 0.00 0.00 34.99 4.26
3756 4262 2.095768 GCAATTTAGCTCGTGTGCAGAA 60.096 45.455 0.00 0.00 34.99 3.02
3757 4263 3.740590 CAATTTAGCTCGTGTGCAGAAG 58.259 45.455 0.00 0.00 34.99 2.85
3758 4264 2.812358 TTTAGCTCGTGTGCAGAAGA 57.188 45.000 0.00 0.00 34.99 2.87
3759 4265 2.065993 TTAGCTCGTGTGCAGAAGAC 57.934 50.000 0.00 0.00 34.99 3.01
3760 4266 1.248486 TAGCTCGTGTGCAGAAGACT 58.752 50.000 0.00 1.90 34.99 3.24
3761 4267 0.319383 AGCTCGTGTGCAGAAGACTG 60.319 55.000 0.00 0.00 45.91 3.51
3762 4268 0.319040 GCTCGTGTGCAGAAGACTGA 60.319 55.000 0.00 0.00 46.03 3.41
3763 4269 1.869754 GCTCGTGTGCAGAAGACTGAA 60.870 52.381 0.00 0.00 46.03 3.02
3767 4273 1.862806 GTGCAGAAGACTGAACGGC 59.137 57.895 0.00 0.00 46.03 5.68
3768 4274 1.301716 TGCAGAAGACTGAACGGCC 60.302 57.895 0.00 0.00 46.03 6.13
3769 4275 1.301716 GCAGAAGACTGAACGGCCA 60.302 57.895 2.24 0.00 46.03 5.36
3770 4276 1.294659 GCAGAAGACTGAACGGCCAG 61.295 60.000 2.24 0.00 46.03 4.85
3772 4278 0.034059 AGAAGACTGAACGGCCAGTG 59.966 55.000 15.19 0.00 46.45 3.66
3773 4279 0.033504 GAAGACTGAACGGCCAGTGA 59.966 55.000 15.19 0.00 46.45 3.41
3774 4280 0.687354 AAGACTGAACGGCCAGTGAT 59.313 50.000 15.19 3.15 46.45 3.06
3775 4281 0.247736 AGACTGAACGGCCAGTGATC 59.752 55.000 15.19 0.00 46.45 2.92
3776 4282 1.078759 GACTGAACGGCCAGTGATCG 61.079 60.000 15.19 0.00 46.45 3.69
3777 4283 1.215382 CTGAACGGCCAGTGATCGA 59.785 57.895 2.24 0.00 0.00 3.59
3778 4284 0.803768 CTGAACGGCCAGTGATCGAG 60.804 60.000 2.24 0.00 0.00 4.04
3779 4285 2.125512 AACGGCCAGTGATCGAGC 60.126 61.111 2.24 0.00 0.00 5.03
3780 4286 2.835701 GAACGGCCAGTGATCGAGCA 62.836 60.000 0.00 0.00 0.00 4.26
3781 4287 2.107750 CGGCCAGTGATCGAGCAT 59.892 61.111 6.66 0.00 0.00 3.79
3782 4288 2.242572 CGGCCAGTGATCGAGCATG 61.243 63.158 6.66 6.39 0.00 4.06
3783 4289 2.541120 GGCCAGTGATCGAGCATGC 61.541 63.158 10.51 10.51 0.00 4.06
3784 4290 1.816679 GCCAGTGATCGAGCATGCA 60.817 57.895 21.98 0.00 0.00 3.96
3785 4291 2.012237 CCAGTGATCGAGCATGCAC 58.988 57.895 21.98 13.43 0.00 4.57
3786 4292 0.461516 CCAGTGATCGAGCATGCACT 60.462 55.000 21.98 10.49 41.90 4.40
3787 4293 3.061093 AGTGATCGAGCATGCACTG 57.939 52.632 21.98 9.03 39.88 3.66
3788 4294 0.533951 AGTGATCGAGCATGCACTGA 59.466 50.000 21.98 14.46 39.88 3.41
3789 4295 1.066645 AGTGATCGAGCATGCACTGAA 60.067 47.619 21.98 2.28 39.88 3.02
3790 4296 1.326852 GTGATCGAGCATGCACTGAAG 59.673 52.381 21.98 0.60 0.00 3.02
3791 4297 1.205417 TGATCGAGCATGCACTGAAGA 59.795 47.619 21.98 6.68 0.00 2.87
3792 4298 1.592081 GATCGAGCATGCACTGAAGAC 59.408 52.381 21.98 6.83 0.00 3.01
3793 4299 0.605083 TCGAGCATGCACTGAAGACT 59.395 50.000 21.98 0.00 0.00 3.24
3794 4300 0.720027 CGAGCATGCACTGAAGACTG 59.280 55.000 21.98 0.00 0.00 3.51
3795 4301 1.670967 CGAGCATGCACTGAAGACTGA 60.671 52.381 21.98 0.00 0.00 3.41
3796 4302 2.420642 GAGCATGCACTGAAGACTGAA 58.579 47.619 21.98 0.00 0.00 3.02
3797 4303 2.149578 AGCATGCACTGAAGACTGAAC 58.850 47.619 21.98 0.00 0.00 3.18
3798 4304 1.875514 GCATGCACTGAAGACTGAACA 59.124 47.619 14.21 0.00 0.00 3.18
3799 4305 2.095869 GCATGCACTGAAGACTGAACAG 60.096 50.000 14.21 0.00 37.62 3.16
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 4.426112 TCGCTCGTGCAGGCTCTG 62.426 66.667 10.43 0.00 39.64 3.35
82 83 9.880157 AGTTGTCGTGTTGTAGGTATTAATAAT 57.120 29.630 0.00 0.00 0.00 1.28
86 87 9.142515 CAATAGTTGTCGTGTTGTAGGTATTAA 57.857 33.333 0.00 0.00 0.00 1.40
87 88 8.522003 TCAATAGTTGTCGTGTTGTAGGTATTA 58.478 33.333 0.00 0.00 0.00 0.98
100 102 0.739813 GGCCGCTCAATAGTTGTCGT 60.740 55.000 0.00 0.00 0.00 4.34
103 105 1.473434 GCTAGGCCGCTCAATAGTTGT 60.473 52.381 0.00 0.00 0.00 3.32
106 108 1.051812 ATGCTAGGCCGCTCAATAGT 58.948 50.000 0.00 0.00 0.00 2.12
113 115 1.227263 CGTACAATGCTAGGCCGCT 60.227 57.895 0.00 0.00 0.00 5.52
118 121 1.200483 CGCTCACGTACAATGCTAGG 58.800 55.000 0.00 0.00 33.53 3.02
143 146 6.153170 ACCCGATAAAAACCAACCGAAAATAT 59.847 34.615 0.00 0.00 0.00 1.28
145 148 4.281435 ACCCGATAAAAACCAACCGAAAAT 59.719 37.500 0.00 0.00 0.00 1.82
151 154 4.096833 GTGGATACCCGATAAAAACCAACC 59.903 45.833 0.00 0.00 34.29 3.77
152 155 4.945543 AGTGGATACCCGATAAAAACCAAC 59.054 41.667 0.00 0.00 34.29 3.77
153 156 4.944930 CAGTGGATACCCGATAAAAACCAA 59.055 41.667 0.00 0.00 34.29 3.67
155 158 4.773013 TCAGTGGATACCCGATAAAAACC 58.227 43.478 0.00 0.00 34.29 3.27
161 166 7.127012 TGTTAAAATCAGTGGATACCCGATA 57.873 36.000 0.00 0.00 32.09 2.92
162 167 5.996644 TGTTAAAATCAGTGGATACCCGAT 58.003 37.500 0.00 0.00 32.09 4.18
358 460 6.099845 GGGATAAGTATTTTCAGACAGAGGGA 59.900 42.308 0.00 0.00 0.00 4.20
359 461 6.126768 TGGGATAAGTATTTTCAGACAGAGGG 60.127 42.308 0.00 0.00 0.00 4.30
360 462 6.889198 TGGGATAAGTATTTTCAGACAGAGG 58.111 40.000 0.00 0.00 0.00 3.69
361 463 8.260818 TCTTGGGATAAGTATTTTCAGACAGAG 58.739 37.037 0.00 0.00 0.00 3.35
362 464 8.146053 TCTTGGGATAAGTATTTTCAGACAGA 57.854 34.615 0.00 0.00 0.00 3.41
363 465 8.792830 TTCTTGGGATAAGTATTTTCAGACAG 57.207 34.615 0.00 0.00 0.00 3.51
364 466 9.177608 CATTCTTGGGATAAGTATTTTCAGACA 57.822 33.333 0.00 0.00 0.00 3.41
365 467 8.131731 GCATTCTTGGGATAAGTATTTTCAGAC 58.868 37.037 0.00 0.00 0.00 3.51
366 468 7.833682 TGCATTCTTGGGATAAGTATTTTCAGA 59.166 33.333 0.00 0.00 0.00 3.27
367 469 7.999679 TGCATTCTTGGGATAAGTATTTTCAG 58.000 34.615 0.00 0.00 0.00 3.02
368 470 7.953005 TGCATTCTTGGGATAAGTATTTTCA 57.047 32.000 0.00 0.00 0.00 2.69
375 477 8.206189 CCATTTTTATGCATTCTTGGGATAAGT 58.794 33.333 3.54 0.00 31.57 2.24
376 478 8.423349 TCCATTTTTATGCATTCTTGGGATAAG 58.577 33.333 3.54 0.00 31.57 1.73
377 479 8.316497 TCCATTTTTATGCATTCTTGGGATAA 57.684 30.769 3.54 0.00 0.00 1.75
378 480 7.911130 TCCATTTTTATGCATTCTTGGGATA 57.089 32.000 3.54 0.00 0.00 2.59
379 481 6.811634 TCCATTTTTATGCATTCTTGGGAT 57.188 33.333 3.54 0.00 0.00 3.85
380 482 6.156602 ACATCCATTTTTATGCATTCTTGGGA 59.843 34.615 3.54 6.33 0.00 4.37
381 483 6.350906 ACATCCATTTTTATGCATTCTTGGG 58.649 36.000 3.54 0.32 0.00 4.12
382 484 9.199982 GATACATCCATTTTTATGCATTCTTGG 57.800 33.333 3.54 6.03 0.00 3.61
383 485 9.976511 AGATACATCCATTTTTATGCATTCTTG 57.023 29.630 3.54 0.00 0.00 3.02
418 520 8.986991 GGAGGAATGGATGTATCTAGACATATT 58.013 37.037 0.00 0.00 40.18 1.28
419 521 7.286546 CGGAGGAATGGATGTATCTAGACATAT 59.713 40.741 0.00 0.00 40.18 1.78
420 522 6.603599 CGGAGGAATGGATGTATCTAGACATA 59.396 42.308 0.00 0.00 40.18 2.29
421 523 5.420421 CGGAGGAATGGATGTATCTAGACAT 59.580 44.000 0.00 0.00 42.82 3.06
422 524 4.767409 CGGAGGAATGGATGTATCTAGACA 59.233 45.833 0.00 0.00 0.00 3.41
423 525 5.010933 TCGGAGGAATGGATGTATCTAGAC 58.989 45.833 0.00 0.00 0.00 2.59
424 526 5.010933 GTCGGAGGAATGGATGTATCTAGA 58.989 45.833 0.00 0.00 0.00 2.43
425 527 4.767409 TGTCGGAGGAATGGATGTATCTAG 59.233 45.833 0.00 0.00 0.00 2.43
426 528 4.736473 TGTCGGAGGAATGGATGTATCTA 58.264 43.478 0.00 0.00 0.00 1.98
427 529 3.576861 TGTCGGAGGAATGGATGTATCT 58.423 45.455 0.00 0.00 0.00 1.98
428 530 4.202264 ACTTGTCGGAGGAATGGATGTATC 60.202 45.833 0.00 0.00 0.00 2.24
429 531 3.711704 ACTTGTCGGAGGAATGGATGTAT 59.288 43.478 0.00 0.00 0.00 2.29
430 532 3.104512 ACTTGTCGGAGGAATGGATGTA 58.895 45.455 0.00 0.00 0.00 2.29
431 533 1.909302 ACTTGTCGGAGGAATGGATGT 59.091 47.619 0.00 0.00 0.00 3.06
432 534 2.698855 ACTTGTCGGAGGAATGGATG 57.301 50.000 0.00 0.00 0.00 3.51
433 535 5.368989 GAAATACTTGTCGGAGGAATGGAT 58.631 41.667 0.00 0.00 0.00 3.41
434 536 4.383770 GGAAATACTTGTCGGAGGAATGGA 60.384 45.833 0.00 0.00 0.00 3.41
435 537 3.877508 GGAAATACTTGTCGGAGGAATGG 59.122 47.826 0.00 0.00 0.00 3.16
436 538 3.555956 CGGAAATACTTGTCGGAGGAATG 59.444 47.826 0.00 0.00 0.00 2.67
437 539 3.431766 CCGGAAATACTTGTCGGAGGAAT 60.432 47.826 0.00 0.00 42.94 3.01
438 540 2.093869 CCGGAAATACTTGTCGGAGGAA 60.094 50.000 0.00 0.00 42.94 3.36
439 541 1.479323 CCGGAAATACTTGTCGGAGGA 59.521 52.381 0.00 0.00 42.94 3.71
440 542 1.479323 TCCGGAAATACTTGTCGGAGG 59.521 52.381 0.00 0.00 43.84 4.30
441 543 2.953466 TCCGGAAATACTTGTCGGAG 57.047 50.000 0.00 0.00 43.84 4.63
442 544 1.135315 CGTCCGGAAATACTTGTCGGA 60.135 52.381 5.23 0.00 46.06 4.55
443 545 1.274596 CGTCCGGAAATACTTGTCGG 58.725 55.000 5.23 0.00 41.80 4.79
444 546 1.135315 TCCGTCCGGAAATACTTGTCG 60.135 52.381 5.23 1.25 42.05 4.35
445 547 2.660189 TCCGTCCGGAAATACTTGTC 57.340 50.000 5.23 0.00 42.05 3.18
455 557 0.251297 TTGTACTCCTTCCGTCCGGA 60.251 55.000 0.00 0.00 43.52 5.14
456 558 0.172803 CTTGTACTCCTTCCGTCCGG 59.827 60.000 0.00 0.00 0.00 5.14
457 559 1.171308 TCTTGTACTCCTTCCGTCCG 58.829 55.000 0.00 0.00 0.00 4.79
458 560 3.889520 AATCTTGTACTCCTTCCGTCC 57.110 47.619 0.00 0.00 0.00 4.79
459 561 4.142227 TGCTAATCTTGTACTCCTTCCGTC 60.142 45.833 0.00 0.00 0.00 4.79
460 562 3.767673 TGCTAATCTTGTACTCCTTCCGT 59.232 43.478 0.00 0.00 0.00 4.69
461 563 4.386867 TGCTAATCTTGTACTCCTTCCG 57.613 45.455 0.00 0.00 0.00 4.30
462 564 7.121315 ACAAAATGCTAATCTTGTACTCCTTCC 59.879 37.037 0.00 0.00 30.41 3.46
463 565 8.045176 ACAAAATGCTAATCTTGTACTCCTTC 57.955 34.615 0.00 0.00 30.41 3.46
464 566 9.686683 ATACAAAATGCTAATCTTGTACTCCTT 57.313 29.630 0.00 0.00 37.15 3.36
555 657 8.897056 GTTTACAAAAACGCTTTGTATCATTG 57.103 30.769 18.75 6.55 42.36 2.82
569 671 7.420184 AAATGCCAGCATAGTTTACAAAAAC 57.580 32.000 5.39 0.00 39.45 2.43
696 802 9.729023 CAATGTAAAAGATGTTTGTGTAACTCA 57.271 29.630 0.00 0.00 38.04 3.41
697 803 9.730420 ACAATGTAAAAGATGTTTGTGTAACTC 57.270 29.630 0.00 0.00 38.04 3.01
726 832 4.359706 ACACGAGGCTTTTTGAAATTGTC 58.640 39.130 0.00 0.00 0.00 3.18
727 833 4.385358 ACACGAGGCTTTTTGAAATTGT 57.615 36.364 0.00 0.00 0.00 2.71
745 851 8.466026 GTTCGTGTGTTTCAAAAATATGTACAC 58.534 33.333 0.00 0.00 37.41 2.90
746 852 8.182227 TGTTCGTGTGTTTCAAAAATATGTACA 58.818 29.630 0.00 0.00 0.00 2.90
784 890 8.114290 CAGCGTTATAGTTTAGTTAACATGTGG 58.886 37.037 8.61 0.00 39.30 4.17
788 894 8.112099 CGTCAGCGTTATAGTTTAGTTAACAT 57.888 34.615 8.61 0.00 39.30 2.71
842 1156 2.818274 GCTTCCCGGTGCCGTTAG 60.818 66.667 9.90 4.97 37.81 2.34
855 1169 2.266055 CGGTGAGGAGGGTGCTTC 59.734 66.667 0.00 0.00 0.00 3.86
860 1174 1.003051 ATAAGGCGGTGAGGAGGGT 59.997 57.895 0.00 0.00 0.00 4.34
861 1175 1.749033 GATAAGGCGGTGAGGAGGG 59.251 63.158 0.00 0.00 0.00 4.30
862 1176 1.749033 GGATAAGGCGGTGAGGAGG 59.251 63.158 0.00 0.00 0.00 4.30
863 1177 1.364171 CGGATAAGGCGGTGAGGAG 59.636 63.158 0.00 0.00 0.00 3.69
864 1178 2.792947 GCGGATAAGGCGGTGAGGA 61.793 63.158 0.00 0.00 0.00 3.71
865 1179 2.280186 GCGGATAAGGCGGTGAGG 60.280 66.667 0.00 0.00 0.00 3.86
867 1181 2.792947 GGAGCGGATAAGGCGGTGA 61.793 63.158 0.00 0.00 35.00 4.02
868 1182 2.280186 GGAGCGGATAAGGCGGTG 60.280 66.667 0.00 0.00 35.00 4.94
869 1183 3.912907 CGGAGCGGATAAGGCGGT 61.913 66.667 0.00 0.00 35.00 5.68
870 1184 3.559657 CTCGGAGCGGATAAGGCGG 62.560 68.421 0.00 0.00 35.00 6.13
871 1185 2.049985 CTCGGAGCGGATAAGGCG 60.050 66.667 0.00 0.00 35.00 5.52
872 1186 2.356433 GCTCGGAGCGGATAAGGC 60.356 66.667 15.09 0.00 0.00 4.35
902 1216 1.948721 GAGCGGCAAAATCCCAAGGG 61.949 60.000 1.45 0.00 0.00 3.95
1046 1382 3.369388 GGGAGAGGGAGGGGAGGT 61.369 72.222 0.00 0.00 0.00 3.85
1065 1401 2.098831 GTCTGTTAGGAACCGCGGC 61.099 63.158 28.58 10.15 0.00 6.53
1066 1402 1.804326 CGTCTGTTAGGAACCGCGG 60.804 63.158 26.86 26.86 0.00 6.46
1067 1403 2.442188 GCGTCTGTTAGGAACCGCG 61.442 63.158 0.00 0.00 31.92 6.46
1068 1404 2.442188 CGCGTCTGTTAGGAACCGC 61.442 63.158 0.00 0.00 36.62 5.68
1069 1405 2.442188 GCGCGTCTGTTAGGAACCG 61.442 63.158 8.43 0.00 0.00 4.44
1070 1406 1.077089 GAGCGCGTCTGTTAGGAACC 61.077 60.000 8.43 0.00 0.00 3.62
1072 1408 1.214589 GGAGCGCGTCTGTTAGGAA 59.785 57.895 8.43 0.00 0.00 3.36
1328 1670 2.234913 ATACCTGGGGCACGACGAAC 62.235 60.000 0.00 0.00 0.00 3.95
1332 1674 2.513897 GCATACCTGGGGCACGAC 60.514 66.667 0.00 0.00 0.00 4.34
1382 1747 0.185901 ACACCAATCAGCACCACCTT 59.814 50.000 0.00 0.00 0.00 3.50
1517 1905 2.853731 ATGAGAATGAGACGGACGAC 57.146 50.000 0.00 0.00 0.00 4.34
1519 1907 2.881074 ACAATGAGAATGAGACGGACG 58.119 47.619 0.00 0.00 0.00 4.79
1520 1908 4.245660 TGAACAATGAGAATGAGACGGAC 58.754 43.478 0.00 0.00 0.00 4.79
1521 1909 4.498241 CTGAACAATGAGAATGAGACGGA 58.502 43.478 0.00 0.00 0.00 4.69
1522 1910 3.063180 GCTGAACAATGAGAATGAGACGG 59.937 47.826 0.00 0.00 0.00 4.79
1537 1925 3.004629 CAGTTGGTGCTAATTGCTGAACA 59.995 43.478 0.00 0.00 43.37 3.18
1538 1926 3.004734 ACAGTTGGTGCTAATTGCTGAAC 59.995 43.478 0.00 0.00 43.37 3.18
1540 1928 2.862541 ACAGTTGGTGCTAATTGCTGA 58.137 42.857 0.00 0.00 43.37 4.26
1541 1929 4.216257 AGTTACAGTTGGTGCTAATTGCTG 59.784 41.667 0.00 0.00 43.37 4.41
1543 1931 4.766404 AGTTACAGTTGGTGCTAATTGC 57.234 40.909 0.00 0.00 43.25 3.56
1552 1940 8.759782 AGTTGCTTATAGATAGTTACAGTTGGT 58.240 33.333 0.00 0.00 0.00 3.67
1562 1950 9.909644 CATACGGTTTAGTTGCTTATAGATAGT 57.090 33.333 0.00 0.00 0.00 2.12
1563 1951 8.861101 GCATACGGTTTAGTTGCTTATAGATAG 58.139 37.037 0.00 0.00 0.00 2.08
1564 1952 8.582437 AGCATACGGTTTAGTTGCTTATAGATA 58.418 33.333 0.00 0.00 36.12 1.98
1565 1953 7.385205 CAGCATACGGTTTAGTTGCTTATAGAT 59.615 37.037 0.00 0.00 36.83 1.98
1566 1954 6.700081 CAGCATACGGTTTAGTTGCTTATAGA 59.300 38.462 0.00 0.00 36.83 1.98
1567 1955 6.479001 ACAGCATACGGTTTAGTTGCTTATAG 59.521 38.462 0.00 0.00 36.83 1.31
1568 1956 6.342906 ACAGCATACGGTTTAGTTGCTTATA 58.657 36.000 0.00 0.00 36.83 0.98
1569 1957 5.183228 ACAGCATACGGTTTAGTTGCTTAT 58.817 37.500 0.00 0.00 36.83 1.73
1571 1959 3.408634 ACAGCATACGGTTTAGTTGCTT 58.591 40.909 0.00 0.00 36.83 3.91
1572 1960 3.053831 ACAGCATACGGTTTAGTTGCT 57.946 42.857 0.00 0.00 38.23 3.91
1573 1961 3.425758 GGAACAGCATACGGTTTAGTTGC 60.426 47.826 0.00 0.00 34.12 4.17
1574 1962 3.749088 TGGAACAGCATACGGTTTAGTTG 59.251 43.478 0.00 0.00 34.12 3.16
1575 1963 3.749609 GTGGAACAGCATACGGTTTAGTT 59.250 43.478 0.00 0.00 41.80 2.24
1576 1964 3.007614 AGTGGAACAGCATACGGTTTAGT 59.992 43.478 0.00 0.00 41.80 2.24
1577 1965 3.596214 AGTGGAACAGCATACGGTTTAG 58.404 45.455 0.00 0.00 41.80 1.85
1579 1967 2.038557 AGAGTGGAACAGCATACGGTTT 59.961 45.455 0.00 0.00 41.80 3.27
1580 1968 1.623811 AGAGTGGAACAGCATACGGTT 59.376 47.619 0.00 0.00 41.80 4.44
1581 1969 1.066858 CAGAGTGGAACAGCATACGGT 60.067 52.381 0.00 0.00 41.80 4.83
1582 1970 1.066858 ACAGAGTGGAACAGCATACGG 60.067 52.381 0.00 0.00 41.80 4.02
1583 1971 2.094494 AGACAGAGTGGAACAGCATACG 60.094 50.000 0.00 0.00 41.80 3.06
1584 1972 3.601443 AGACAGAGTGGAACAGCATAC 57.399 47.619 0.00 0.00 41.80 2.39
1587 1975 3.834813 AGATTAGACAGAGTGGAACAGCA 59.165 43.478 0.00 0.00 41.80 4.41
1588 1976 4.081972 TGAGATTAGACAGAGTGGAACAGC 60.082 45.833 0.00 0.00 41.80 4.40
1589 1977 5.406649 GTGAGATTAGACAGAGTGGAACAG 58.593 45.833 0.00 0.00 41.80 3.16
1590 1978 4.082733 CGTGAGATTAGACAGAGTGGAACA 60.083 45.833 0.00 0.00 41.43 3.18
1592 1980 3.119459 GCGTGAGATTAGACAGAGTGGAA 60.119 47.826 0.00 0.00 0.00 3.53
1593 1981 2.423892 GCGTGAGATTAGACAGAGTGGA 59.576 50.000 0.00 0.00 0.00 4.02
1594 1982 2.164422 TGCGTGAGATTAGACAGAGTGG 59.836 50.000 0.00 0.00 0.00 4.00
1595 1983 3.494045 TGCGTGAGATTAGACAGAGTG 57.506 47.619 0.00 0.00 0.00 3.51
1596 1984 3.508012 AGTTGCGTGAGATTAGACAGAGT 59.492 43.478 0.00 0.00 0.00 3.24
1597 1985 3.856521 CAGTTGCGTGAGATTAGACAGAG 59.143 47.826 0.00 0.00 0.00 3.35
1598 1986 3.367395 CCAGTTGCGTGAGATTAGACAGA 60.367 47.826 0.00 0.00 0.00 3.41
1599 1987 2.926200 CCAGTTGCGTGAGATTAGACAG 59.074 50.000 0.00 0.00 0.00 3.51
1600 1988 2.299013 ACCAGTTGCGTGAGATTAGACA 59.701 45.455 0.00 0.00 0.00 3.41
1601 1989 2.960819 ACCAGTTGCGTGAGATTAGAC 58.039 47.619 0.00 0.00 0.00 2.59
1602 1990 3.325870 CAACCAGTTGCGTGAGATTAGA 58.674 45.455 0.00 0.00 33.45 2.10
1603 1991 3.729526 CAACCAGTTGCGTGAGATTAG 57.270 47.619 0.00 0.00 33.45 1.73
1617 2005 4.877823 TCAATAGCACTAATCAGCAACCAG 59.122 41.667 0.00 0.00 0.00 4.00
1628 2016 9.023962 ACTGATTGGAAAAATCAATAGCACTAA 57.976 29.630 2.69 0.00 36.35 2.24
1630 2018 7.472334 ACTGATTGGAAAAATCAATAGCACT 57.528 32.000 2.69 0.00 36.35 4.40
1631 2019 7.956558 CAACTGATTGGAAAAATCAATAGCAC 58.043 34.615 2.69 0.00 36.35 4.40
1656 2044 1.228737 TAAGCAGTTTGGCACCCCC 60.229 57.895 0.00 0.00 35.83 5.40
1657 2045 0.539669 AGTAAGCAGTTTGGCACCCC 60.540 55.000 0.00 0.00 35.83 4.95
1658 2046 1.269723 GAAGTAAGCAGTTTGGCACCC 59.730 52.381 0.00 0.00 35.83 4.61
1659 2047 2.226674 GAGAAGTAAGCAGTTTGGCACC 59.773 50.000 0.00 0.00 35.83 5.01
1660 2048 2.226674 GGAGAAGTAAGCAGTTTGGCAC 59.773 50.000 0.00 0.00 35.83 5.01
1661 2049 2.504367 GGAGAAGTAAGCAGTTTGGCA 58.496 47.619 0.00 0.00 35.83 4.92
1663 2051 3.008485 AGAGGGAGAAGTAAGCAGTTTGG 59.992 47.826 0.00 0.00 0.00 3.28
1664 2052 4.249661 GAGAGGGAGAAGTAAGCAGTTTG 58.750 47.826 0.00 0.00 0.00 2.93
1665 2053 3.904339 TGAGAGGGAGAAGTAAGCAGTTT 59.096 43.478 0.00 0.00 0.00 2.66
1666 2054 3.259625 GTGAGAGGGAGAAGTAAGCAGTT 59.740 47.826 0.00 0.00 0.00 3.16
1667 2055 2.829120 GTGAGAGGGAGAAGTAAGCAGT 59.171 50.000 0.00 0.00 0.00 4.40
1668 2056 3.096092 AGTGAGAGGGAGAAGTAAGCAG 58.904 50.000 0.00 0.00 0.00 4.24
1669 2057 3.093057 GAGTGAGAGGGAGAAGTAAGCA 58.907 50.000 0.00 0.00 0.00 3.91
1670 2058 2.098443 CGAGTGAGAGGGAGAAGTAAGC 59.902 54.545 0.00 0.00 0.00 3.09
1671 2059 2.098443 GCGAGTGAGAGGGAGAAGTAAG 59.902 54.545 0.00 0.00 0.00 2.34
1672 2060 2.093106 GCGAGTGAGAGGGAGAAGTAA 58.907 52.381 0.00 0.00 0.00 2.24
1673 2061 1.004394 TGCGAGTGAGAGGGAGAAGTA 59.996 52.381 0.00 0.00 0.00 2.24
1674 2062 0.251386 TGCGAGTGAGAGGGAGAAGT 60.251 55.000 0.00 0.00 0.00 3.01
1678 2066 1.440893 CCATGCGAGTGAGAGGGAG 59.559 63.158 0.00 0.00 0.00 4.30
1686 2074 2.202987 GGAGAGGCCATGCGAGTG 60.203 66.667 5.01 0.00 36.34 3.51
1687 2075 2.685017 TGGAGAGGCCATGCGAGT 60.685 61.111 5.01 0.00 43.33 4.18
1695 2083 2.653234 ATGACATTGATGGAGAGGCC 57.347 50.000 0.00 0.00 37.10 5.19
1696 2089 4.903054 TCATATGACATTGATGGAGAGGC 58.097 43.478 0.00 0.00 0.00 4.70
1709 2102 9.967346 GTAGCTTTTCTAGTACATCATATGACA 57.033 33.333 7.78 0.00 0.00 3.58
1720 2113 6.071503 TCCCAACTCAGTAGCTTTTCTAGTAC 60.072 42.308 0.00 0.00 29.96 2.73
1721 2114 6.014647 TCCCAACTCAGTAGCTTTTCTAGTA 58.985 40.000 0.00 0.00 29.96 1.82
1722 2115 4.838986 TCCCAACTCAGTAGCTTTTCTAGT 59.161 41.667 0.00 0.00 0.00 2.57
1728 2121 5.598417 ACAAATTTCCCAACTCAGTAGCTTT 59.402 36.000 0.00 0.00 0.00 3.51
1739 2132 4.306600 CTGGTTAGCACAAATTTCCCAAC 58.693 43.478 0.00 0.00 0.00 3.77
1742 2135 2.897326 ACCTGGTTAGCACAAATTTCCC 59.103 45.455 0.00 0.00 0.00 3.97
1778 2171 3.251004 GCCCTGATTTTATCCTAACAGCG 59.749 47.826 0.00 0.00 0.00 5.18
1823 2216 4.023107 TCTCTTAAGTCGGCAGATATTCCG 60.023 45.833 1.63 0.00 46.52 4.30
1864 2257 8.415950 ACATGAAGAACCCAATAACACATAAA 57.584 30.769 0.00 0.00 0.00 1.40
1870 2263 5.640147 AGGAACATGAAGAACCCAATAACA 58.360 37.500 0.00 0.00 0.00 2.41
1900 2296 8.774890 TTGCAGTACCGAATACAAACTTATTA 57.225 30.769 0.00 0.00 36.09 0.98
1903 2299 7.675962 AATTGCAGTACCGAATACAAACTTA 57.324 32.000 0.00 0.00 36.09 2.24
1912 2308 4.578928 GGGACAATAATTGCAGTACCGAAT 59.421 41.667 0.00 0.00 0.00 3.34
1914 2310 3.055021 TGGGACAATAATTGCAGTACCGA 60.055 43.478 0.00 0.00 37.82 4.69
1938 2338 2.402564 ACTGAATCGGATCATGGGAGT 58.597 47.619 0.00 0.00 0.00 3.85
1939 2339 3.482156 AACTGAATCGGATCATGGGAG 57.518 47.619 0.00 0.00 0.00 4.30
1942 2342 6.818869 CGATATAACTGAATCGGATCATGG 57.181 41.667 0.00 0.00 40.93 3.66
1951 2351 6.345882 GCGGAGACAAACGATATAACTGAATC 60.346 42.308 0.00 0.00 0.00 2.52
1952 2352 5.462398 GCGGAGACAAACGATATAACTGAAT 59.538 40.000 0.00 0.00 0.00 2.57
1953 2353 4.802039 GCGGAGACAAACGATATAACTGAA 59.198 41.667 0.00 0.00 0.00 3.02
1955 2355 3.179795 CGCGGAGACAAACGATATAACTG 59.820 47.826 0.00 0.00 0.00 3.16
1962 2362 3.179265 CGCGCGGAGACAAACGAT 61.179 61.111 24.84 0.00 0.00 3.73
1979 2383 1.235724 GTGACAGTAACCCAGTTGCC 58.764 55.000 0.00 0.00 0.00 4.52
1980 2384 1.602377 GTGTGACAGTAACCCAGTTGC 59.398 52.381 0.00 0.00 0.00 4.17
1981 2385 1.864711 CGTGTGACAGTAACCCAGTTG 59.135 52.381 0.00 0.00 0.00 3.16
1982 2386 1.758280 TCGTGTGACAGTAACCCAGTT 59.242 47.619 0.00 0.00 0.00 3.16
1987 2396 2.736144 TGGATCGTGTGACAGTAACC 57.264 50.000 0.00 0.00 0.00 2.85
1998 2407 5.621197 TGGTAAAACTGAATTGGATCGTG 57.379 39.130 0.00 0.00 0.00 4.35
2000 2409 6.034898 GCAAATGGTAAAACTGAATTGGATCG 59.965 38.462 0.00 0.00 0.00 3.69
2007 2453 5.120519 CGCAATGCAAATGGTAAAACTGAAT 59.879 36.000 5.91 0.00 0.00 2.57
2012 2458 3.063485 ACCGCAATGCAAATGGTAAAAC 58.937 40.909 5.91 0.00 0.00 2.43
2042 2488 1.338973 TCGTCCAACAGGTGTACTCAC 59.661 52.381 0.00 0.00 43.19 3.51
2044 2490 2.806608 TTCGTCCAACAGGTGTACTC 57.193 50.000 0.00 0.00 0.00 2.59
2048 2494 0.179032 TGCATTCGTCCAACAGGTGT 60.179 50.000 0.00 0.00 0.00 4.16
2051 2497 1.131126 GTGATGCATTCGTCCAACAGG 59.869 52.381 0.00 0.00 0.00 4.00
2061 2508 8.986477 AAATAAAAGGTTACTGTGATGCATTC 57.014 30.769 0.00 0.00 0.00 2.67
2099 2555 7.341805 ACTACTCAGATCCAGTAAAATGCAAT 58.658 34.615 0.00 0.00 0.00 3.56
2142 2598 3.884693 TCTACGTCAGTTGTCTTGGTACA 59.115 43.478 0.00 0.00 0.00 2.90
2143 2599 4.214971 TCTCTACGTCAGTTGTCTTGGTAC 59.785 45.833 0.00 0.00 0.00 3.34
2192 2658 2.558554 AAGTCGGCCTTGATCCGTCG 62.559 60.000 0.00 0.00 46.49 5.12
2205 2671 2.490115 AGAGTAGCAGAGTTGAAGTCGG 59.510 50.000 0.00 0.00 0.00 4.79
2251 2722 1.376609 GCCCACCCGATTCATGTGAC 61.377 60.000 0.00 0.00 31.66 3.67
2268 2739 2.288825 TGTATAGGAAGCACGCATAGCC 60.289 50.000 0.00 0.00 0.00 3.93
2315 2795 9.494271 GTTTGCAGAGGTAGAATCATAATGATA 57.506 33.333 0.00 0.00 35.76 2.15
2347 2827 6.594788 ACAAATGCAACATCAGTAGGATTT 57.405 33.333 0.00 0.00 32.57 2.17
2348 2828 6.183360 CGTACAAATGCAACATCAGTAGGATT 60.183 38.462 0.00 0.00 32.57 3.01
2349 2829 5.294306 CGTACAAATGCAACATCAGTAGGAT 59.706 40.000 0.00 0.00 36.39 3.24
2452 2932 3.935203 TCTTAAGAGAATTGCTTGCCTCG 59.065 43.478 0.00 0.00 0.00 4.63
2482 2962 9.406113 AGCATATTTGAGCTAGAAGAAAATTCT 57.594 29.630 0.00 0.00 39.78 2.40
2489 2969 8.885693 TCCTATAGCATATTTGAGCTAGAAGA 57.114 34.615 0.00 0.00 45.53 2.87
2490 2970 9.364989 GTTCCTATAGCATATTTGAGCTAGAAG 57.635 37.037 0.00 0.00 45.53 2.85
2757 3237 3.125487 GCTCTAGCGCGTAATCATCTCTA 59.875 47.826 8.43 0.00 0.00 2.43
2836 3316 2.027745 GGATGAGGTTGCAGAGAGTCAA 60.028 50.000 0.00 0.00 0.00 3.18
2837 3317 1.552337 GGATGAGGTTGCAGAGAGTCA 59.448 52.381 0.00 0.00 0.00 3.41
2838 3318 1.552337 TGGATGAGGTTGCAGAGAGTC 59.448 52.381 0.00 0.00 0.00 3.36
2839 3319 1.649321 TGGATGAGGTTGCAGAGAGT 58.351 50.000 0.00 0.00 0.00 3.24
2840 3320 2.775911 TTGGATGAGGTTGCAGAGAG 57.224 50.000 0.00 0.00 0.00 3.20
3089 3570 5.086104 ACATACAGTCCATAGCGTTCTTT 57.914 39.130 0.00 0.00 0.00 2.52
3207 3688 4.271696 TCAACATCATCTGAAACGTCCT 57.728 40.909 0.00 0.00 0.00 3.85
3219 3700 8.969260 TGAAGCTACAGAATAATCAACATCAT 57.031 30.769 0.00 0.00 0.00 2.45
3297 3781 1.480789 TGTGCTCCTATCGCTACCAA 58.519 50.000 0.00 0.00 0.00 3.67
3421 3927 4.362279 TCTTTTCCCGTATTTCGTATCCG 58.638 43.478 0.00 0.00 37.94 4.18
3491 3997 4.551388 GTTGAACCATTTTATTCACCGCA 58.449 39.130 0.00 0.00 34.61 5.69
3561 4067 4.826733 TGTGTCACCATCTACTGCATTTTT 59.173 37.500 0.00 0.00 0.00 1.94
3562 4068 4.397420 TGTGTCACCATCTACTGCATTTT 58.603 39.130 0.00 0.00 0.00 1.82
3563 4069 4.019792 TGTGTCACCATCTACTGCATTT 57.980 40.909 0.00 0.00 0.00 2.32
3564 4070 3.701205 TGTGTCACCATCTACTGCATT 57.299 42.857 0.00 0.00 0.00 3.56
3565 4071 3.008375 ACTTGTGTCACCATCTACTGCAT 59.992 43.478 0.00 0.00 0.00 3.96
3566 4072 2.368548 ACTTGTGTCACCATCTACTGCA 59.631 45.455 0.00 0.00 0.00 4.41
3567 4073 3.045601 ACTTGTGTCACCATCTACTGC 57.954 47.619 0.00 0.00 0.00 4.40
3568 4074 5.812642 GGATTACTTGTGTCACCATCTACTG 59.187 44.000 0.00 0.00 0.00 2.74
3569 4075 5.483937 TGGATTACTTGTGTCACCATCTACT 59.516 40.000 0.00 0.00 0.00 2.57
3570 4076 5.581085 GTGGATTACTTGTGTCACCATCTAC 59.419 44.000 0.00 0.00 0.00 2.59
3571 4077 5.338056 GGTGGATTACTTGTGTCACCATCTA 60.338 44.000 0.00 0.00 42.82 1.98
3572 4078 4.565652 GGTGGATTACTTGTGTCACCATCT 60.566 45.833 0.00 0.00 42.82 2.90
3573 4079 3.689649 GGTGGATTACTTGTGTCACCATC 59.310 47.826 0.00 0.00 42.82 3.51
3574 4080 3.686016 GGTGGATTACTTGTGTCACCAT 58.314 45.455 0.00 0.00 42.82 3.55
3575 4081 2.549134 CGGTGGATTACTTGTGTCACCA 60.549 50.000 10.34 0.00 43.29 4.17
3576 4082 2.073816 CGGTGGATTACTTGTGTCACC 58.926 52.381 0.00 0.00 40.68 4.02
3577 4083 3.034721 TCGGTGGATTACTTGTGTCAC 57.965 47.619 0.00 0.00 0.00 3.67
3578 4084 3.659786 CTTCGGTGGATTACTTGTGTCA 58.340 45.455 0.00 0.00 0.00 3.58
3579 4085 2.415512 GCTTCGGTGGATTACTTGTGTC 59.584 50.000 0.00 0.00 0.00 3.67
3580 4086 2.224426 TGCTTCGGTGGATTACTTGTGT 60.224 45.455 0.00 0.00 0.00 3.72
3581 4087 2.422597 TGCTTCGGTGGATTACTTGTG 58.577 47.619 0.00 0.00 0.00 3.33
3582 4088 2.851263 TGCTTCGGTGGATTACTTGT 57.149 45.000 0.00 0.00 0.00 3.16
3583 4089 3.334691 TCTTGCTTCGGTGGATTACTTG 58.665 45.455 0.00 0.00 0.00 3.16
3584 4090 3.260884 TCTCTTGCTTCGGTGGATTACTT 59.739 43.478 0.00 0.00 0.00 2.24
3585 4091 2.832129 TCTCTTGCTTCGGTGGATTACT 59.168 45.455 0.00 0.00 0.00 2.24
3586 4092 3.247006 TCTCTTGCTTCGGTGGATTAC 57.753 47.619 0.00 0.00 0.00 1.89
3587 4093 5.808366 ATATCTCTTGCTTCGGTGGATTA 57.192 39.130 0.00 0.00 0.00 1.75
3588 4094 4.696479 ATATCTCTTGCTTCGGTGGATT 57.304 40.909 0.00 0.00 0.00 3.01
3589 4095 6.406400 GCTATATATCTCTTGCTTCGGTGGAT 60.406 42.308 0.00 0.00 0.00 3.41
3590 4096 5.105716 GCTATATATCTCTTGCTTCGGTGGA 60.106 44.000 0.00 0.00 0.00 4.02
3591 4097 5.105752 GCTATATATCTCTTGCTTCGGTGG 58.894 45.833 0.00 0.00 0.00 4.61
3592 4098 5.714047 TGCTATATATCTCTTGCTTCGGTG 58.286 41.667 0.00 0.00 0.00 4.94
3593 4099 5.478679 ACTGCTATATATCTCTTGCTTCGGT 59.521 40.000 0.00 0.00 0.00 4.69
3594 4100 5.960113 ACTGCTATATATCTCTTGCTTCGG 58.040 41.667 0.00 0.00 0.00 4.30
3595 4101 6.851609 AGACTGCTATATATCTCTTGCTTCG 58.148 40.000 0.00 0.00 0.00 3.79
3596 4102 9.787532 CTTAGACTGCTATATATCTCTTGCTTC 57.212 37.037 0.00 0.00 0.00 3.86
3597 4103 9.527157 TCTTAGACTGCTATATATCTCTTGCTT 57.473 33.333 0.00 0.00 0.00 3.91
3598 4104 9.527157 TTCTTAGACTGCTATATATCTCTTGCT 57.473 33.333 0.00 0.00 0.00 3.91
3599 4105 9.787532 CTTCTTAGACTGCTATATATCTCTTGC 57.212 37.037 0.00 0.00 0.00 4.01
3609 4115 9.415008 AGTTCATCTTCTTCTTAGACTGCTATA 57.585 33.333 0.00 0.00 0.00 1.31
3610 4116 8.305046 AGTTCATCTTCTTCTTAGACTGCTAT 57.695 34.615 0.00 0.00 0.00 2.97
3611 4117 7.710676 AGTTCATCTTCTTCTTAGACTGCTA 57.289 36.000 0.00 0.00 0.00 3.49
3612 4118 6.603940 AGTTCATCTTCTTCTTAGACTGCT 57.396 37.500 0.00 0.00 0.00 4.24
3613 4119 9.458374 GTATAGTTCATCTTCTTCTTAGACTGC 57.542 37.037 0.00 0.00 0.00 4.40
3618 4124 9.743057 CCTGTGTATAGTTCATCTTCTTCTTAG 57.257 37.037 0.00 0.00 0.00 2.18
3619 4125 9.475620 TCCTGTGTATAGTTCATCTTCTTCTTA 57.524 33.333 0.00 0.00 0.00 2.10
3620 4126 8.367660 TCCTGTGTATAGTTCATCTTCTTCTT 57.632 34.615 0.00 0.00 0.00 2.52
3621 4127 7.962995 TCCTGTGTATAGTTCATCTTCTTCT 57.037 36.000 0.00 0.00 0.00 2.85
3622 4128 9.039870 CAATCCTGTGTATAGTTCATCTTCTTC 57.960 37.037 0.00 0.00 0.00 2.87
3623 4129 8.762645 TCAATCCTGTGTATAGTTCATCTTCTT 58.237 33.333 0.00 0.00 0.00 2.52
3624 4130 8.311395 TCAATCCTGTGTATAGTTCATCTTCT 57.689 34.615 0.00 0.00 0.00 2.85
3625 4131 8.417106 TCTCAATCCTGTGTATAGTTCATCTTC 58.583 37.037 0.00 0.00 0.00 2.87
3626 4132 8.311395 TCTCAATCCTGTGTATAGTTCATCTT 57.689 34.615 0.00 0.00 0.00 2.40
3627 4133 7.904558 TCTCAATCCTGTGTATAGTTCATCT 57.095 36.000 0.00 0.00 0.00 2.90
3628 4134 9.553064 AATTCTCAATCCTGTGTATAGTTCATC 57.447 33.333 0.00 0.00 0.00 2.92
3629 4135 9.911788 AAATTCTCAATCCTGTGTATAGTTCAT 57.088 29.630 0.00 0.00 0.00 2.57
3630 4136 9.739276 AAAATTCTCAATCCTGTGTATAGTTCA 57.261 29.630 0.00 0.00 0.00 3.18
3637 4143 9.967451 TGGTATAAAAATTCTCAATCCTGTGTA 57.033 29.630 0.00 0.00 0.00 2.90
3638 4144 8.739972 GTGGTATAAAAATTCTCAATCCTGTGT 58.260 33.333 0.00 0.00 0.00 3.72
3639 4145 8.960591 AGTGGTATAAAAATTCTCAATCCTGTG 58.039 33.333 0.00 0.00 0.00 3.66
3650 4156 9.916397 CGTCAATCAGTAGTGGTATAAAAATTC 57.084 33.333 0.00 0.00 0.00 2.17
3651 4157 9.661563 TCGTCAATCAGTAGTGGTATAAAAATT 57.338 29.630 0.00 0.00 0.00 1.82
3652 4158 9.832445 ATCGTCAATCAGTAGTGGTATAAAAAT 57.168 29.630 0.00 0.00 0.00 1.82
3653 4159 9.093970 CATCGTCAATCAGTAGTGGTATAAAAA 57.906 33.333 0.00 0.00 0.00 1.94
3654 4160 8.471609 TCATCGTCAATCAGTAGTGGTATAAAA 58.528 33.333 0.00 0.00 0.00 1.52
3655 4161 8.002984 TCATCGTCAATCAGTAGTGGTATAAA 57.997 34.615 0.00 0.00 0.00 1.40
3656 4162 7.576861 TCATCGTCAATCAGTAGTGGTATAA 57.423 36.000 0.00 0.00 0.00 0.98
3657 4163 7.576861 TTCATCGTCAATCAGTAGTGGTATA 57.423 36.000 0.00 0.00 0.00 1.47
3658 4164 6.465439 TTCATCGTCAATCAGTAGTGGTAT 57.535 37.500 0.00 0.00 0.00 2.73
3659 4165 5.907866 TTCATCGTCAATCAGTAGTGGTA 57.092 39.130 0.00 0.00 0.00 3.25
3660 4166 4.801330 TTCATCGTCAATCAGTAGTGGT 57.199 40.909 0.00 0.00 0.00 4.16
3661 4167 4.929211 TGTTTCATCGTCAATCAGTAGTGG 59.071 41.667 0.00 0.00 0.00 4.00
3662 4168 6.472680 CATGTTTCATCGTCAATCAGTAGTG 58.527 40.000 0.00 0.00 0.00 2.74
3663 4169 5.063944 GCATGTTTCATCGTCAATCAGTAGT 59.936 40.000 0.00 0.00 0.00 2.73
3664 4170 5.063817 TGCATGTTTCATCGTCAATCAGTAG 59.936 40.000 0.00 0.00 0.00 2.57
3665 4171 4.934602 TGCATGTTTCATCGTCAATCAGTA 59.065 37.500 0.00 0.00 0.00 2.74
3666 4172 3.752747 TGCATGTTTCATCGTCAATCAGT 59.247 39.130 0.00 0.00 0.00 3.41
3667 4173 4.093514 GTGCATGTTTCATCGTCAATCAG 58.906 43.478 0.00 0.00 0.00 2.90
3668 4174 3.424697 CGTGCATGTTTCATCGTCAATCA 60.425 43.478 0.00 0.00 0.00 2.57
3669 4175 3.093574 CGTGCATGTTTCATCGTCAATC 58.906 45.455 0.00 0.00 0.00 2.67
3670 4176 2.483877 ACGTGCATGTTTCATCGTCAAT 59.516 40.909 5.51 0.00 0.00 2.57
3671 4177 1.870402 ACGTGCATGTTTCATCGTCAA 59.130 42.857 5.51 0.00 0.00 3.18
3672 4178 1.194322 CACGTGCATGTTTCATCGTCA 59.806 47.619 9.37 0.00 0.00 4.35
3673 4179 1.194547 ACACGTGCATGTTTCATCGTC 59.805 47.619 17.22 0.00 0.00 4.20
3674 4180 1.194547 GACACGTGCATGTTTCATCGT 59.805 47.619 17.22 8.53 31.24 3.73
3675 4181 1.460743 AGACACGTGCATGTTTCATCG 59.539 47.619 23.46 8.79 31.24 3.84
3676 4182 3.542712 AAGACACGTGCATGTTTCATC 57.457 42.857 23.46 12.82 31.24 2.92
3677 4183 3.988379 AAAGACACGTGCATGTTTCAT 57.012 38.095 23.46 11.82 31.24 2.57
3678 4184 3.623510 TGTAAAGACACGTGCATGTTTCA 59.376 39.130 23.46 6.30 31.24 2.69
3679 4185 3.966218 GTGTAAAGACACGTGCATGTTTC 59.034 43.478 17.22 15.91 46.23 2.78
3680 4186 3.947626 GTGTAAAGACACGTGCATGTTT 58.052 40.909 17.22 10.78 46.23 2.83
3681 4187 3.602390 GTGTAAAGACACGTGCATGTT 57.398 42.857 17.22 7.50 46.23 2.71
3691 4197 7.726216 AGTGCATATATAGCTGTGTAAAGACA 58.274 34.615 0.00 0.00 0.00 3.41
3692 4198 8.491152 CAAGTGCATATATAGCTGTGTAAAGAC 58.509 37.037 0.00 0.00 0.00 3.01
3693 4199 7.657354 CCAAGTGCATATATAGCTGTGTAAAGA 59.343 37.037 0.00 0.00 0.00 2.52
3694 4200 7.571983 GCCAAGTGCATATATAGCTGTGTAAAG 60.572 40.741 0.00 0.00 40.77 1.85
3695 4201 6.204688 GCCAAGTGCATATATAGCTGTGTAAA 59.795 38.462 0.00 0.00 40.77 2.01
3696 4202 5.700832 GCCAAGTGCATATATAGCTGTGTAA 59.299 40.000 0.00 0.00 40.77 2.41
3697 4203 5.012046 AGCCAAGTGCATATATAGCTGTGTA 59.988 40.000 0.00 0.00 44.83 2.90
3698 4204 4.067896 GCCAAGTGCATATATAGCTGTGT 58.932 43.478 0.00 0.00 40.77 3.72
3699 4205 4.321718 AGCCAAGTGCATATATAGCTGTG 58.678 43.478 0.00 0.00 44.83 3.66
3700 4206 4.630644 AGCCAAGTGCATATATAGCTGT 57.369 40.909 0.00 0.00 44.83 4.40
3701 4207 6.652481 AGTTAAGCCAAGTGCATATATAGCTG 59.348 38.462 0.00 0.00 44.83 4.24
3702 4208 6.773638 AGTTAAGCCAAGTGCATATATAGCT 58.226 36.000 0.00 0.00 44.83 3.32
3703 4209 7.201565 GCTAGTTAAGCCAAGTGCATATATAGC 60.202 40.741 0.00 0.00 46.25 2.97
3704 4210 8.190888 GCTAGTTAAGCCAAGTGCATATATAG 57.809 38.462 0.00 0.00 46.25 1.31
3719 4225 8.591799 AGCTAAATTGCTGGTAGCTAGTTAAGC 61.592 40.741 6.80 1.78 46.73 3.09
3720 4226 6.763610 AGCTAAATTGCTGGTAGCTAGTTAAG 59.236 38.462 6.80 0.00 46.73 1.85
3721 4227 6.650120 AGCTAAATTGCTGGTAGCTAGTTAA 58.350 36.000 6.80 0.00 46.73 2.01
3722 4228 6.235231 AGCTAAATTGCTGGTAGCTAGTTA 57.765 37.500 6.80 4.09 46.73 2.24
3723 4229 5.104259 AGCTAAATTGCTGGTAGCTAGTT 57.896 39.130 6.80 3.12 46.73 2.24
3724 4230 4.762289 AGCTAAATTGCTGGTAGCTAGT 57.238 40.909 6.80 0.00 46.73 2.57
3732 4238 1.466360 GCACACGAGCTAAATTGCTGG 60.466 52.381 0.00 0.00 44.17 4.85
3733 4239 1.197492 TGCACACGAGCTAAATTGCTG 59.803 47.619 10.26 0.00 44.17 4.41
3735 4241 1.464608 TCTGCACACGAGCTAAATTGC 59.535 47.619 0.00 0.00 34.99 3.56
3736 4242 3.433274 TCTTCTGCACACGAGCTAAATTG 59.567 43.478 0.00 0.00 34.99 2.32
3737 4243 3.433615 GTCTTCTGCACACGAGCTAAATT 59.566 43.478 0.00 0.00 34.99 1.82
3738 4244 2.996621 GTCTTCTGCACACGAGCTAAAT 59.003 45.455 0.00 0.00 34.99 1.40
3739 4245 2.035961 AGTCTTCTGCACACGAGCTAAA 59.964 45.455 0.00 0.00 34.99 1.85
3740 4246 1.613925 AGTCTTCTGCACACGAGCTAA 59.386 47.619 0.00 0.00 34.99 3.09
3741 4247 1.068264 CAGTCTTCTGCACACGAGCTA 60.068 52.381 0.00 0.00 34.79 3.32
3742 4248 0.319383 CAGTCTTCTGCACACGAGCT 60.319 55.000 0.00 0.00 34.79 4.09
3743 4249 0.319040 TCAGTCTTCTGCACACGAGC 60.319 55.000 0.00 0.00 41.10 5.03
3744 4250 1.789464 GTTCAGTCTTCTGCACACGAG 59.211 52.381 0.00 0.00 41.10 4.18
3745 4251 1.852942 GTTCAGTCTTCTGCACACGA 58.147 50.000 0.00 0.00 41.10 4.35
3746 4252 0.504384 CGTTCAGTCTTCTGCACACG 59.496 55.000 0.00 0.00 37.61 4.49
3747 4253 0.861837 CCGTTCAGTCTTCTGCACAC 59.138 55.000 0.00 0.00 37.61 3.82
3748 4254 0.880278 GCCGTTCAGTCTTCTGCACA 60.880 55.000 0.00 0.00 37.61 4.57
3749 4255 1.569479 GGCCGTTCAGTCTTCTGCAC 61.569 60.000 0.00 0.00 41.10 4.57
3750 4256 1.301716 GGCCGTTCAGTCTTCTGCA 60.302 57.895 0.00 0.00 41.10 4.41
3751 4257 1.294659 CTGGCCGTTCAGTCTTCTGC 61.295 60.000 0.00 0.00 41.10 4.26
3752 4258 0.034059 ACTGGCCGTTCAGTCTTCTG 59.966 55.000 0.00 0.00 43.82 3.02
3753 4259 0.034059 CACTGGCCGTTCAGTCTTCT 59.966 55.000 0.00 0.00 45.24 2.85
3754 4260 0.033504 TCACTGGCCGTTCAGTCTTC 59.966 55.000 0.00 0.00 45.24 2.87
3755 4261 0.687354 ATCACTGGCCGTTCAGTCTT 59.313 50.000 0.00 0.00 45.24 3.01
3756 4262 0.247736 GATCACTGGCCGTTCAGTCT 59.752 55.000 0.00 0.00 45.24 3.24
3757 4263 1.078759 CGATCACTGGCCGTTCAGTC 61.079 60.000 0.00 0.00 45.24 3.51
3759 4265 0.803768 CTCGATCACTGGCCGTTCAG 60.804 60.000 0.00 0.00 40.40 3.02
3760 4266 1.215382 CTCGATCACTGGCCGTTCA 59.785 57.895 0.00 0.00 0.00 3.18
3761 4267 2.167861 GCTCGATCACTGGCCGTTC 61.168 63.158 0.00 0.00 0.00 3.95
3762 4268 2.125512 GCTCGATCACTGGCCGTT 60.126 61.111 0.00 0.00 0.00 4.44
3763 4269 2.725312 ATGCTCGATCACTGGCCGT 61.725 57.895 0.00 0.00 0.00 5.68
3764 4270 2.107750 ATGCTCGATCACTGGCCG 59.892 61.111 0.00 0.00 0.00 6.13
3765 4271 2.541120 GCATGCTCGATCACTGGCC 61.541 63.158 11.37 0.00 0.00 5.36
3766 4272 1.816679 TGCATGCTCGATCACTGGC 60.817 57.895 20.33 0.00 0.00 4.85
3767 4273 0.461516 AGTGCATGCTCGATCACTGG 60.462 55.000 20.33 0.00 38.25 4.00
3768 4274 0.651031 CAGTGCATGCTCGATCACTG 59.349 55.000 20.33 17.99 46.68 3.66
3769 4275 0.533951 TCAGTGCATGCTCGATCACT 59.466 50.000 20.33 9.83 40.08 3.41
3770 4276 1.326852 CTTCAGTGCATGCTCGATCAC 59.673 52.381 20.33 7.39 0.00 3.06
3771 4277 1.205417 TCTTCAGTGCATGCTCGATCA 59.795 47.619 20.33 0.00 0.00 2.92
3772 4278 1.592081 GTCTTCAGTGCATGCTCGATC 59.408 52.381 20.33 4.45 0.00 3.69
3773 4279 1.206610 AGTCTTCAGTGCATGCTCGAT 59.793 47.619 20.33 0.00 0.00 3.59
3774 4280 0.605083 AGTCTTCAGTGCATGCTCGA 59.395 50.000 20.33 13.70 0.00 4.04
3775 4281 0.720027 CAGTCTTCAGTGCATGCTCG 59.280 55.000 20.33 11.64 0.00 5.03
3776 4282 2.090400 TCAGTCTTCAGTGCATGCTC 57.910 50.000 20.33 15.94 0.00 4.26
3777 4283 2.149578 GTTCAGTCTTCAGTGCATGCT 58.850 47.619 20.33 0.00 0.00 3.79
3778 4284 1.875514 TGTTCAGTCTTCAGTGCATGC 59.124 47.619 11.82 11.82 0.00 4.06
3779 4285 3.808116 CTGTTCAGTCTTCAGTGCATG 57.192 47.619 0.00 0.00 0.00 4.06


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.