Multiple sequence alignment - TraesCS4B01G026500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G026500 chr4B 100.000 3941 0 0 1 3941 20000150 20004090 0.000000e+00 7278.0
1 TraesCS4B01G026500 chr4B 79.221 462 38 27 377 809 20000958 20000526 6.490000e-68 268.0
2 TraesCS4B01G026500 chr4B 97.778 45 1 0 3627 3671 496549958 496549914 1.170000e-10 78.7
3 TraesCS4B01G026500 chr4D 94.050 2000 85 15 1043 3034 10640709 10642682 0.000000e+00 3003.0
4 TraesCS4B01G026500 chr4D 89.854 2257 141 48 894 3112 10389917 10387711 0.000000e+00 2819.0
5 TraesCS4B01G026500 chr4D 88.235 306 21 7 2616 2909 10385039 10384737 6.270000e-93 351.0
6 TraesCS4B01G026500 chr4D 77.326 344 42 22 2784 3112 10643578 10643900 1.880000e-38 171.0
7 TraesCS4B01G026500 chr4D 77.409 301 25 13 631 891 110253797 110254094 5.310000e-29 139.0
8 TraesCS4B01G026500 chr4D 96.203 79 3 0 3026 3104 10643495 10643573 3.200000e-26 130.0
9 TraesCS4B01G026500 chr4D 87.387 111 10 2 3 112 131332348 131332455 1.490000e-24 124.0
10 TraesCS4B01G026500 chr4D 75.585 299 32 14 631 891 110253016 110253311 4.160000e-20 110.0
11 TraesCS4B01G026500 chr4D 78.462 195 20 10 634 809 10637019 10637210 1.500000e-19 108.0
12 TraesCS4B01G026500 chr4D 89.873 79 8 0 631 709 473827865 473827943 6.970000e-18 102.0
13 TraesCS4B01G026500 chr4D 85.000 100 14 1 709 807 436932324 436932423 2.510000e-17 100.0
14 TraesCS4B01G026500 chr4D 95.556 45 2 0 3630 3674 509120689 509120733 5.460000e-09 73.1
15 TraesCS4B01G026500 chr4D 84.722 72 9 2 2982 3052 10384696 10384626 1.960000e-08 71.3
16 TraesCS4B01G026500 chr4D 90.196 51 3 2 3625 3674 100796179 100796228 9.140000e-07 65.8
17 TraesCS4B01G026500 chr4A 92.881 2079 100 26 1048 3112 593289992 593287948 0.000000e+00 2976.0
18 TraesCS4B01G026500 chr4A 86.463 229 21 7 3717 3940 593287310 593287087 3.930000e-60 243.0
19 TraesCS4B01G026500 chr4A 83.838 99 13 2 710 806 690143211 690143308 1.510000e-14 91.6
20 TraesCS4B01G026500 chr5D 80.590 814 124 20 1128 1924 501095812 501096608 7.290000e-167 597.0
21 TraesCS4B01G026500 chr5D 80.027 731 133 10 2039 2758 501096768 501097496 2.700000e-146 529.0
22 TraesCS4B01G026500 chr5D 78.571 196 20 11 634 809 300951317 300951124 4.160000e-20 110.0
23 TraesCS4B01G026500 chr5D 77.041 196 23 11 634 809 300950065 300949872 4.190000e-15 93.5
24 TraesCS4B01G026500 chr5D 84.810 79 12 0 634 712 300950938 300950860 3.260000e-11 80.5
25 TraesCS4B01G026500 chr5D 97.778 45 1 0 3630 3674 528967496 528967452 1.170000e-10 78.7
26 TraesCS4B01G026500 chr5D 95.556 45 2 0 3618 3662 408750826 408750782 5.460000e-09 73.1
27 TraesCS4B01G026500 chr3A 81.791 681 106 15 1141 1818 609688692 609688027 4.450000e-154 555.0
28 TraesCS4B01G026500 chr3A 85.421 535 72 6 2057 2588 609687746 609687215 5.760000e-153 551.0
29 TraesCS4B01G026500 chr3A 88.285 239 24 3 360 596 571191716 571191480 2.320000e-72 283.0
30 TraesCS4B01G026500 chr3A 97.872 47 1 0 3628 3674 467864450 467864404 9.080000e-12 82.4
31 TraesCS4B01G026500 chr6D 81.487 686 116 9 2077 2758 58855678 58855000 1.600000e-153 553.0
32 TraesCS4B01G026500 chr6D 74.662 296 33 20 634 890 256315540 256315832 4.190000e-15 93.5
33 TraesCS4B01G026500 chr6D 89.706 68 7 0 709 776 105815822 105815889 1.950000e-13 87.9
34 TraesCS4B01G026500 chr6D 97.917 48 1 0 3627 3674 144745025 144745072 2.520000e-12 84.2
35 TraesCS4B01G026500 chr6D 97.619 42 1 0 3622 3663 319425122 319425081 5.460000e-09 73.1
36 TraesCS4B01G026500 chr6D 93.478 46 3 0 3630 3675 13089724 13089769 7.070000e-08 69.4
37 TraesCS4B01G026500 chr6A 81.368 687 115 10 2077 2758 74905835 74905157 7.450000e-152 547.0
38 TraesCS4B01G026500 chr6A 97.015 134 4 0 209 342 6890542 6890409 3.960000e-55 226.0
39 TraesCS4B01G026500 chr6A 89.535 86 9 0 805 890 615245349 615245434 4.160000e-20 110.0
40 TraesCS4B01G026500 chr6A 89.394 66 7 0 709 774 128422863 128422928 2.520000e-12 84.2
41 TraesCS4B01G026500 chr6A 92.157 51 3 1 3620 3670 70393296 70393247 1.960000e-08 71.3
42 TraesCS4B01G026500 chr6A 97.561 41 1 0 3630 3670 617660741 617660701 1.960000e-08 71.3
43 TraesCS4B01G026500 chr6A 93.478 46 3 0 3625 3670 201248482 201248437 7.070000e-08 69.4
44 TraesCS4B01G026500 chr3D 85.234 535 73 6 2057 2588 466679098 466678567 2.680000e-151 545.0
45 TraesCS4B01G026500 chr3D 80.735 680 115 10 1141 1818 466680044 466679379 2.100000e-142 516.0
46 TraesCS4B01G026500 chr3D 93.103 58 4 0 820 877 372638122 372638065 7.020000e-13 86.1
47 TraesCS4B01G026500 chr3D 97.917 48 1 0 3627 3674 393409055 393409008 2.520000e-12 84.2
48 TraesCS4B01G026500 chr3D 95.833 48 2 0 3627 3674 304711021 304710974 1.170000e-10 78.7
49 TraesCS4B01G026500 chr3D 97.778 45 1 0 3630 3674 497827076 497827032 1.170000e-10 78.7
50 TraesCS4B01G026500 chr3D 97.778 45 1 0 3627 3671 515636126 515636170 1.170000e-10 78.7
51 TraesCS4B01G026500 chr3B 85.234 535 73 6 2057 2588 620454921 620454390 2.680000e-151 545.0
52 TraesCS4B01G026500 chr3B 81.176 680 112 14 1141 1818 620455867 620455202 2.080000e-147 532.0
53 TraesCS4B01G026500 chr3B 88.186 237 24 4 360 596 755664161 755663929 3.000000e-71 279.0
54 TraesCS4B01G026500 chr3B 97.015 134 4 0 209 342 17350426 17350559 3.960000e-55 226.0
55 TraesCS4B01G026500 chr3B 93.636 110 7 0 108 217 239251439 239251330 8.760000e-37 165.0
56 TraesCS4B01G026500 chr3B 82.587 201 15 5 709 890 801196736 801196537 4.080000e-35 159.0
57 TraesCS4B01G026500 chr3B 88.288 111 10 2 3 112 332012461 332012569 3.200000e-26 130.0
58 TraesCS4B01G026500 chr3B 88.288 111 10 3 3 112 801200014 801200122 3.200000e-26 130.0
59 TraesCS4B01G026500 chr3B 95.522 67 3 0 634 700 801197178 801197112 1.500000e-19 108.0
60 TraesCS4B01G026500 chr5A 80.303 726 123 14 2057 2766 626119928 626119207 7.500000e-147 531.0
61 TraesCS4B01G026500 chr5A 89.121 239 14 2 110 336 429751283 429751521 1.790000e-73 287.0
62 TraesCS4B01G026500 chr5A 76.531 294 31 12 631 889 47114990 47115280 4.130000e-25 126.0
63 TraesCS4B01G026500 chr5A 94.231 52 3 0 3623 3674 564501246 564501195 3.260000e-11 80.5
64 TraesCS4B01G026500 chr6B 80.786 687 119 10 2077 2758 132431389 132430711 3.490000e-145 525.0
65 TraesCS4B01G026500 chr6B 85.115 262 10 2 109 342 208078825 208078565 1.420000e-59 241.0
66 TraesCS4B01G026500 chr6B 85.714 231 29 3 359 588 210573056 210573283 1.420000e-59 241.0
67 TraesCS4B01G026500 chr6B 96.992 133 4 0 210 342 65064821 65064953 1.430000e-54 224.0
68 TraesCS4B01G026500 chr6B 87.387 111 10 3 3 112 140363751 140363858 1.490000e-24 124.0
69 TraesCS4B01G026500 chr6B 87.387 111 11 2 3 112 640670550 640670658 1.490000e-24 124.0
70 TraesCS4B01G026500 chr6B 79.000 200 22 11 709 890 210573172 210572975 6.920000e-23 119.0
71 TraesCS4B01G026500 chr6B 76.531 196 25 10 634 809 716581841 716581647 1.950000e-13 87.9
72 TraesCS4B01G026500 chr6B 82.692 104 9 5 709 811 192343757 192343852 2.520000e-12 84.2
73 TraesCS4B01G026500 chr6B 96.000 50 1 1 3625 3674 390628817 390628769 3.260000e-11 80.5
74 TraesCS4B01G026500 chr6B 95.918 49 2 0 3626 3674 640963698 640963746 3.260000e-11 80.5
75 TraesCS4B01G026500 chr6B 95.833 48 2 0 3627 3674 143668618 143668665 1.170000e-10 78.7
76 TraesCS4B01G026500 chr7D 80.250 719 122 15 2057 2759 591813570 591812856 1.250000e-144 523.0
77 TraesCS4B01G026500 chr7D 78.489 781 142 19 1144 1917 591814462 591813701 4.580000e-134 488.0
78 TraesCS4B01G026500 chr7B 79.257 781 136 19 1144 1917 671702117 671702878 4.510000e-144 521.0
79 TraesCS4B01G026500 chr7B 77.749 782 146 21 1144 1917 685666792 685667553 4.640000e-124 455.0
80 TraesCS4B01G026500 chr7B 96.992 133 4 0 209 341 136524979 136525111 1.430000e-54 224.0
81 TraesCS4B01G026500 chr7B 84.553 246 14 5 111 342 683756762 683756527 5.130000e-54 222.0
82 TraesCS4B01G026500 chr7B 88.462 78 7 2 634 710 141867656 141867580 4.190000e-15 93.5
83 TraesCS4B01G026500 chr5B 80.198 707 123 13 2065 2758 622605461 622606163 7.550000e-142 514.0
84 TraesCS4B01G026500 chr5B 89.496 238 21 3 360 596 122455714 122455480 8.280000e-77 298.0
85 TraesCS4B01G026500 chr5B 85.328 259 12 1 110 342 70625069 70625327 1.090000e-60 244.0
86 TraesCS4B01G026500 chr5B 97.015 134 4 0 209 342 415048155 415048022 3.960000e-55 226.0
87 TraesCS4B01G026500 chr5B 94.690 113 5 1 106 217 655472685 655472797 1.460000e-39 174.0
88 TraesCS4B01G026500 chr5B 78.061 196 20 11 634 809 344285089 344285281 6.970000e-18 102.0
89 TraesCS4B01G026500 chr7A 78.900 782 137 21 1144 1917 727276696 727277457 4.540000e-139 505.0
90 TraesCS4B01G026500 chr7A 78.389 782 141 21 1144 1917 726605982 726605221 2.130000e-132 483.0
91 TraesCS4B01G026500 chr7A 95.918 49 1 1 3626 3674 386395053 386395006 1.170000e-10 78.7
92 TraesCS4B01G026500 chr2A 90.789 228 17 4 370 596 502932054 502931830 6.400000e-78 302.0
93 TraesCS4B01G026500 chr2A 88.655 238 22 5 360 595 502932369 502932135 6.450000e-73 285.0
94 TraesCS4B01G026500 chr2A 87.342 237 27 2 360 595 502932999 502932765 6.490000e-68 268.0
95 TraesCS4B01G026500 chr2A 97.015 134 4 0 209 342 211336630 211336763 3.960000e-55 226.0
96 TraesCS4B01G026500 chr2A 80.690 290 26 9 631 891 502931850 502932138 8.640000e-47 198.0
97 TraesCS4B01G026500 chr2A 94.495 109 5 1 110 217 675586309 675586201 2.440000e-37 167.0
98 TraesCS4B01G026500 chr2A 81.347 193 17 6 635 808 502932158 502932350 5.310000e-29 139.0
99 TraesCS4B01G026500 chr2A 80.102 196 19 6 634 809 502932787 502932982 1.150000e-25 128.0
100 TraesCS4B01G026500 chr2A 89.873 79 8 0 631 709 693118932 693118854 6.970000e-18 102.0
101 TraesCS4B01G026500 chr1D 89.076 238 24 2 359 596 60179841 60179606 1.070000e-75 294.0
102 TraesCS4B01G026500 chr1D 87.288 236 26 3 362 596 60180909 60180677 2.330000e-67 267.0
103 TraesCS4B01G026500 chr1D 82.890 263 16 2 108 342 42897383 42897644 3.990000e-50 209.0
104 TraesCS4B01G026500 chr1D 83.333 252 11 6 107 327 348032389 348032640 1.860000e-48 204.0
105 TraesCS4B01G026500 chr1D 90.090 111 9 2 3 112 60178315 60178206 4.110000e-30 143.0
106 TraesCS4B01G026500 chr1D 78.136 279 21 11 634 873 60179629 60179906 1.480000e-29 141.0
107 TraesCS4B01G026500 chr1D 89.189 111 9 3 3 112 436734974 436735082 6.870000e-28 135.0
108 TraesCS4B01G026500 chr1D 80.851 188 15 6 705 873 60180792 60180977 1.150000e-25 128.0
109 TraesCS4B01G026500 chr1D 78.109 201 22 9 631 809 339383398 339383598 1.500000e-19 108.0
110 TraesCS4B01G026500 chr1D 86.667 75 9 1 804 877 60181146 60181220 9.080000e-12 82.4
111 TraesCS4B01G026500 chr1D 85.333 75 10 1 804 877 60179034 60179108 4.220000e-10 76.8
112 TraesCS4B01G026500 chr1D 95.349 43 2 0 3628 3670 16165111 16165069 7.070000e-08 69.4
113 TraesCS4B01G026500 chr1D 95.349 43 2 0 3628 3670 63428284 63428326 7.070000e-08 69.4
114 TraesCS4B01G026500 chr1D 93.333 45 3 0 3626 3670 9228745 9228701 2.540000e-07 67.6
115 TraesCS4B01G026500 chr1D 95.238 42 2 0 3630 3671 291791958 291791999 2.540000e-07 67.6
116 TraesCS4B01G026500 chr1D 88.889 54 5 1 3618 3670 104577205 104577258 9.140000e-07 65.8
117 TraesCS4B01G026500 chr2B 97.015 134 4 0 209 342 649446969 649447102 3.960000e-55 226.0
118 TraesCS4B01G026500 chr1A 97.015 134 4 0 209 342 41902405 41902272 3.960000e-55 226.0
119 TraesCS4B01G026500 chr1A 95.556 45 2 0 3630 3674 90157103 90157147 5.460000e-09 73.1
120 TraesCS4B01G026500 chr1A 92.308 52 2 1 3628 3677 589633225 589633174 5.460000e-09 73.1
121 TraesCS4B01G026500 chr1B 93.103 116 6 2 103 217 505432308 505432422 6.770000e-38 169.0
122 TraesCS4B01G026500 chr1B 79.110 292 24 15 631 890 579931818 579931532 2.440000e-37 167.0
123 TraesCS4B01G026500 chr1B 89.189 111 9 2 3 112 675457756 675457648 6.870000e-28 135.0
124 TraesCS4B01G026500 chr1B 75.958 287 34 18 631 891 543166218 543166495 8.950000e-22 115.0
125 TraesCS4B01G026500 chrUn 87.387 111 10 2 3 112 216304715 216304822 1.490000e-24 124.0
126 TraesCS4B01G026500 chrUn 97.727 44 1 0 666 709 321764437 321764394 4.220000e-10 76.8
127 TraesCS4B01G026500 chrUn 97.727 44 1 0 666 709 345553927 345553884 4.220000e-10 76.8
128 TraesCS4B01G026500 chrUn 93.750 48 2 1 3628 3674 319453404 319453451 1.960000e-08 71.3
129 TraesCS4B01G026500 chrUn 93.617 47 3 0 3628 3674 459903860 459903906 1.960000e-08 71.3
130 TraesCS4B01G026500 chrUn 93.617 47 3 0 3628 3674 460612427 460612381 1.960000e-08 71.3
131 TraesCS4B01G026500 chrUn 93.478 46 2 1 3626 3670 76770136 76770091 2.540000e-07 67.6
132 TraesCS4B01G026500 chrUn 95.122 41 2 0 3630 3670 320348008 320348048 9.140000e-07 65.8
133 TraesCS4B01G026500 chrUn 100.000 34 0 0 3630 3663 17103767 17103800 3.290000e-06 63.9
134 TraesCS4B01G026500 chrUn 100.000 34 0 0 3630 3663 17126111 17126144 3.290000e-06 63.9
135 TraesCS4B01G026500 chrUn 87.273 55 6 1 3617 3670 64964633 64964579 1.180000e-05 62.1
136 TraesCS4B01G026500 chrUn 94.595 37 2 0 3627 3663 110464825 110464789 1.530000e-04 58.4
137 TraesCS4B01G026500 chr2D 78.061 196 21 13 634 809 634076773 634076966 1.940000e-18 104.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G026500 chr4B 20000150 20004090 3940 False 7278.000000 7278 100.000000 1 3941 1 chr4B.!!$F1 3940
1 TraesCS4B01G026500 chr4D 10384626 10389917 5291 True 1080.433333 2819 87.603667 894 3112 3 chr4D.!!$R1 2218
2 TraesCS4B01G026500 chr4D 10637019 10643900 6881 False 853.000000 3003 86.510250 634 3112 4 chr4D.!!$F6 2478
3 TraesCS4B01G026500 chr4A 593287087 593289992 2905 True 1609.500000 2976 89.672000 1048 3940 2 chr4A.!!$R1 2892
4 TraesCS4B01G026500 chr5D 501095812 501097496 1684 False 563.000000 597 80.308500 1128 2758 2 chr5D.!!$F1 1630
5 TraesCS4B01G026500 chr3A 609687215 609688692 1477 True 553.000000 555 83.606000 1141 2588 2 chr3A.!!$R3 1447
6 TraesCS4B01G026500 chr6D 58855000 58855678 678 True 553.000000 553 81.487000 2077 2758 1 chr6D.!!$R1 681
7 TraesCS4B01G026500 chr6A 74905157 74905835 678 True 547.000000 547 81.368000 2077 2758 1 chr6A.!!$R3 681
8 TraesCS4B01G026500 chr3D 466678567 466680044 1477 True 530.500000 545 82.984500 1141 2588 2 chr3D.!!$R5 1447
9 TraesCS4B01G026500 chr3B 620454390 620455867 1477 True 538.500000 545 83.205000 1141 2588 2 chr3B.!!$R3 1447
10 TraesCS4B01G026500 chr5A 626119207 626119928 721 True 531.000000 531 80.303000 2057 2766 1 chr5A.!!$R2 709
11 TraesCS4B01G026500 chr6B 132430711 132431389 678 True 525.000000 525 80.786000 2077 2758 1 chr6B.!!$R1 681
12 TraesCS4B01G026500 chr7D 591812856 591814462 1606 True 505.500000 523 79.369500 1144 2759 2 chr7D.!!$R1 1615
13 TraesCS4B01G026500 chr7B 671702117 671702878 761 False 521.000000 521 79.257000 1144 1917 1 chr7B.!!$F2 773
14 TraesCS4B01G026500 chr7B 685666792 685667553 761 False 455.000000 455 77.749000 1144 1917 1 chr7B.!!$F3 773
15 TraesCS4B01G026500 chr5B 622605461 622606163 702 False 514.000000 514 80.198000 2065 2758 1 chr5B.!!$F3 693
16 TraesCS4B01G026500 chr7A 727276696 727277457 761 False 505.000000 505 78.900000 1144 1917 1 chr7A.!!$F1 773
17 TraesCS4B01G026500 chr7A 726605221 726605982 761 True 483.000000 483 78.389000 1144 1917 1 chr7A.!!$R2 773
18 TraesCS4B01G026500 chr2A 502931830 502932999 1169 True 285.000000 302 88.928667 360 596 3 chr2A.!!$R3 236
19 TraesCS4B01G026500 chr1D 60178206 60180909 2703 True 234.666667 294 88.818000 3 596 3 chr1D.!!$R3 593

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
968 5778 0.248661 TTGCTGATCTCTCGCGCTAC 60.249 55.0 5.56 0.0 0.00 3.58 F
1008 6208 0.032130 AGCAGTACACCACACTCGTG 59.968 55.0 0.00 0.0 43.21 4.35 F
1031 6231 0.036388 TCTTAGCTTGGGGCAACGAG 60.036 55.0 0.00 0.0 44.79 4.18 F
1032 6232 0.036388 CTTAGCTTGGGGCAACGAGA 60.036 55.0 0.00 0.0 44.79 4.04 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2828 8210 0.456221 CGTTGTCGCTGGAGGTATCT 59.544 55.000 0.00 0.00 0.0 1.98 R
2911 8314 2.238521 ACACAATTTCGGTTCCATGCT 58.761 42.857 0.00 0.00 0.0 3.79 R
2939 8342 2.299013 AGCTTTCGCATCCATCCGTATA 59.701 45.455 0.00 0.00 39.1 1.47 R
3000 8439 6.893759 TCCATTTTGTAGTACACAACAATCG 58.106 36.000 1.43 7.06 46.8 3.34 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
49 50 7.464830 TTTTTCGCACCGAATCAATTTTAAA 57.535 28.000 0.59 0.00 45.28 1.52
50 51 7.464830 TTTTCGCACCGAATCAATTTTAAAA 57.535 28.000 2.51 2.51 45.28 1.52
51 52 6.441099 TTCGCACCGAATCAATTTTAAAAC 57.559 33.333 1.97 0.00 41.05 2.43
52 53 4.613448 TCGCACCGAATCAATTTTAAAACG 59.387 37.500 1.97 1.26 31.06 3.60
53 54 4.613448 CGCACCGAATCAATTTTAAAACGA 59.387 37.500 1.97 3.66 0.00 3.85
54 55 5.115773 CGCACCGAATCAATTTTAAAACGAA 59.884 36.000 1.97 0.00 0.00 3.85
55 56 6.513317 GCACCGAATCAATTTTAAAACGAAG 58.487 36.000 1.97 0.00 0.00 3.79
57 58 7.616514 GCACCGAATCAATTTTAAAACGAAGTC 60.617 37.037 1.97 4.94 45.00 3.01
58 59 7.377397 CACCGAATCAATTTTAAAACGAAGTCA 59.623 33.333 1.97 0.00 45.00 3.41
59 60 8.079809 ACCGAATCAATTTTAAAACGAAGTCAT 58.920 29.630 1.97 0.00 45.00 3.06
60 61 8.911662 CCGAATCAATTTTAAAACGAAGTCATT 58.088 29.630 1.97 0.00 45.00 2.57
103 104 9.679661 TTGTTAGACAATTCTTTATGCTATGGA 57.320 29.630 0.00 0.00 32.34 3.41
104 105 9.851686 TGTTAGACAATTCTTTATGCTATGGAT 57.148 29.630 0.00 0.00 32.75 3.41
115 116 9.338968 TCTTTATGCTATGGATAATTAGAGGGT 57.661 33.333 0.00 0.00 0.00 4.34
116 117 9.388506 CTTTATGCTATGGATAATTAGAGGGTG 57.611 37.037 0.00 0.00 0.00 4.61
117 118 6.959606 ATGCTATGGATAATTAGAGGGTGT 57.040 37.500 0.00 0.00 0.00 4.16
118 119 6.763715 TGCTATGGATAATTAGAGGGTGTT 57.236 37.500 0.00 0.00 0.00 3.32
119 120 7.149202 TGCTATGGATAATTAGAGGGTGTTT 57.851 36.000 0.00 0.00 0.00 2.83
120 121 6.998074 TGCTATGGATAATTAGAGGGTGTTTG 59.002 38.462 0.00 0.00 0.00 2.93
121 122 6.998673 GCTATGGATAATTAGAGGGTGTTTGT 59.001 38.462 0.00 0.00 0.00 2.83
122 123 7.502561 GCTATGGATAATTAGAGGGTGTTTGTT 59.497 37.037 0.00 0.00 0.00 2.83
123 124 9.408648 CTATGGATAATTAGAGGGTGTTTGTTT 57.591 33.333 0.00 0.00 0.00 2.83
124 125 8.664669 ATGGATAATTAGAGGGTGTTTGTTTT 57.335 30.769 0.00 0.00 0.00 2.43
125 126 8.117813 TGGATAATTAGAGGGTGTTTGTTTTC 57.882 34.615 0.00 0.00 0.00 2.29
126 127 7.726291 TGGATAATTAGAGGGTGTTTGTTTTCA 59.274 33.333 0.00 0.00 0.00 2.69
127 128 8.244113 GGATAATTAGAGGGTGTTTGTTTTCAG 58.756 37.037 0.00 0.00 0.00 3.02
128 129 6.405278 AATTAGAGGGTGTTTGTTTTCAGG 57.595 37.500 0.00 0.00 0.00 3.86
129 130 3.662759 AGAGGGTGTTTGTTTTCAGGA 57.337 42.857 0.00 0.00 0.00 3.86
130 131 3.976015 AGAGGGTGTTTGTTTTCAGGAA 58.024 40.909 0.00 0.00 0.00 3.36
131 132 3.699538 AGAGGGTGTTTGTTTTCAGGAAC 59.300 43.478 0.00 0.00 0.00 3.62
132 133 3.699538 GAGGGTGTTTGTTTTCAGGAACT 59.300 43.478 0.00 0.00 43.88 3.01
133 134 4.093743 AGGGTGTTTGTTTTCAGGAACTT 58.906 39.130 0.00 0.00 34.60 2.66
134 135 5.265989 AGGGTGTTTGTTTTCAGGAACTTA 58.734 37.500 0.00 0.00 34.60 2.24
135 136 5.897250 AGGGTGTTTGTTTTCAGGAACTTAT 59.103 36.000 0.00 0.00 34.60 1.73
136 137 6.382859 AGGGTGTTTGTTTTCAGGAACTTATT 59.617 34.615 0.00 0.00 34.60 1.40
137 138 6.478673 GGGTGTTTGTTTTCAGGAACTTATTG 59.521 38.462 0.00 0.00 34.60 1.90
138 139 6.478673 GGTGTTTGTTTTCAGGAACTTATTGG 59.521 38.462 0.00 0.00 34.60 3.16
139 140 7.039270 GTGTTTGTTTTCAGGAACTTATTGGT 58.961 34.615 0.00 0.00 34.60 3.67
140 141 7.547722 GTGTTTGTTTTCAGGAACTTATTGGTT 59.452 33.333 0.00 0.00 34.60 3.67
141 142 8.097662 TGTTTGTTTTCAGGAACTTATTGGTTT 58.902 29.630 0.00 0.00 34.60 3.27
142 143 9.589111 GTTTGTTTTCAGGAACTTATTGGTTTA 57.411 29.630 0.00 0.00 34.60 2.01
143 144 9.810545 TTTGTTTTCAGGAACTTATTGGTTTAG 57.189 29.630 0.00 0.00 34.60 1.85
144 145 7.947282 TGTTTTCAGGAACTTATTGGTTTAGG 58.053 34.615 0.00 0.00 34.60 2.69
145 146 7.014808 TGTTTTCAGGAACTTATTGGTTTAGGG 59.985 37.037 0.00 0.00 34.60 3.53
146 147 6.457159 TTCAGGAACTTATTGGTTTAGGGA 57.543 37.500 0.00 0.00 34.60 4.20
147 148 5.812286 TCAGGAACTTATTGGTTTAGGGAC 58.188 41.667 0.00 0.00 34.60 4.46
148 149 5.550403 TCAGGAACTTATTGGTTTAGGGACT 59.450 40.000 0.00 0.00 39.39 3.85
149 150 6.045106 TCAGGAACTTATTGGTTTAGGGACTT 59.955 38.462 0.00 0.00 36.39 3.01
150 151 7.238096 TCAGGAACTTATTGGTTTAGGGACTTA 59.762 37.037 0.00 0.00 36.39 2.24
151 152 7.886446 CAGGAACTTATTGGTTTAGGGACTTAA 59.114 37.037 0.00 0.00 36.39 1.85
152 153 8.450434 AGGAACTTATTGGTTTAGGGACTTAAA 58.550 33.333 0.00 0.00 34.75 1.52
153 154 9.081204 GGAACTTATTGGTTTAGGGACTTAAAA 57.919 33.333 0.00 0.00 41.75 1.52
178 179 9.682465 AAAAGTTCCTATAAGTCCCATCTAAAC 57.318 33.333 0.00 0.00 0.00 2.01
179 180 7.376335 AGTTCCTATAAGTCCCATCTAAACC 57.624 40.000 0.00 0.00 0.00 3.27
180 181 6.906901 AGTTCCTATAAGTCCCATCTAAACCA 59.093 38.462 0.00 0.00 0.00 3.67
181 182 7.404980 AGTTCCTATAAGTCCCATCTAAACCAA 59.595 37.037 0.00 0.00 0.00 3.67
182 183 7.758820 TCCTATAAGTCCCATCTAAACCAAA 57.241 36.000 0.00 0.00 0.00 3.28
183 184 7.571025 TCCTATAAGTCCCATCTAAACCAAAC 58.429 38.462 0.00 0.00 0.00 2.93
184 185 7.183112 TCCTATAAGTCCCATCTAAACCAAACA 59.817 37.037 0.00 0.00 0.00 2.83
185 186 7.499232 CCTATAAGTCCCATCTAAACCAAACAG 59.501 40.741 0.00 0.00 0.00 3.16
186 187 4.034285 AGTCCCATCTAAACCAAACAGG 57.966 45.455 0.00 0.00 45.67 4.00
187 188 3.655777 AGTCCCATCTAAACCAAACAGGA 59.344 43.478 0.00 0.00 41.22 3.86
188 189 4.010349 GTCCCATCTAAACCAAACAGGAG 58.990 47.826 0.00 0.00 41.22 3.69
189 190 3.010138 TCCCATCTAAACCAAACAGGAGG 59.990 47.826 0.00 0.00 41.22 4.30
190 191 3.356290 CCATCTAAACCAAACAGGAGGG 58.644 50.000 0.00 0.00 41.22 4.30
191 192 3.010138 CCATCTAAACCAAACAGGAGGGA 59.990 47.826 0.00 0.00 41.22 4.20
192 193 3.782656 TCTAAACCAAACAGGAGGGAC 57.217 47.619 0.00 0.00 41.22 4.46
194 195 3.720002 TCTAAACCAAACAGGAGGGACTT 59.280 43.478 0.00 0.00 41.55 3.01
195 196 4.909088 TCTAAACCAAACAGGAGGGACTTA 59.091 41.667 0.00 0.00 41.55 2.24
196 197 4.529716 AAACCAAACAGGAGGGACTTAA 57.470 40.909 0.00 0.00 41.55 1.85
197 198 4.529716 AACCAAACAGGAGGGACTTAAA 57.470 40.909 0.00 0.00 41.55 1.52
198 199 4.100279 ACCAAACAGGAGGGACTTAAAG 57.900 45.455 0.00 0.00 41.55 1.85
199 200 3.462205 ACCAAACAGGAGGGACTTAAAGT 59.538 43.478 0.00 0.00 41.55 2.66
200 201 3.821033 CCAAACAGGAGGGACTTAAAGTG 59.179 47.826 0.00 0.00 41.55 3.16
201 202 3.790089 AACAGGAGGGACTTAAAGTGG 57.210 47.619 0.00 0.00 41.55 4.00
202 203 1.985895 ACAGGAGGGACTTAAAGTGGG 59.014 52.381 0.00 0.00 41.55 4.61
203 204 0.992695 AGGAGGGACTTAAAGTGGGC 59.007 55.000 0.00 0.00 41.55 5.36
204 205 0.696501 GGAGGGACTTAAAGTGGGCA 59.303 55.000 0.00 0.00 41.55 5.36
205 206 1.285078 GGAGGGACTTAAAGTGGGCAT 59.715 52.381 0.00 0.00 41.55 4.40
206 207 2.291605 GGAGGGACTTAAAGTGGGCATT 60.292 50.000 0.00 0.00 41.55 3.56
207 208 3.431415 GAGGGACTTAAAGTGGGCATTT 58.569 45.455 0.00 0.00 41.55 2.32
208 209 3.165071 AGGGACTTAAAGTGGGCATTTG 58.835 45.455 0.00 0.00 27.25 2.32
209 210 2.233676 GGGACTTAAAGTGGGCATTTGG 59.766 50.000 0.00 0.00 0.00 3.28
210 211 2.233676 GGACTTAAAGTGGGCATTTGGG 59.766 50.000 0.00 0.00 0.00 4.12
211 212 3.161866 GACTTAAAGTGGGCATTTGGGA 58.838 45.455 0.00 0.00 0.00 4.37
212 213 2.897326 ACTTAAAGTGGGCATTTGGGAC 59.103 45.455 0.00 0.00 0.00 4.46
213 214 2.990740 TAAAGTGGGCATTTGGGACT 57.009 45.000 0.00 0.00 0.00 3.85
214 215 2.101640 AAAGTGGGCATTTGGGACTT 57.898 45.000 0.00 0.00 0.00 3.01
215 216 2.990740 AAGTGGGCATTTGGGACTTA 57.009 45.000 0.00 0.00 0.00 2.24
216 217 3.473113 AAGTGGGCATTTGGGACTTAT 57.527 42.857 0.00 0.00 0.00 1.73
217 218 4.601406 AAGTGGGCATTTGGGACTTATA 57.399 40.909 0.00 0.00 0.00 0.98
218 219 4.170468 AGTGGGCATTTGGGACTTATAG 57.830 45.455 0.00 0.00 0.00 1.31
219 220 3.117512 AGTGGGCATTTGGGACTTATAGG 60.118 47.826 0.00 0.00 0.00 2.57
220 221 2.176798 TGGGCATTTGGGACTTATAGGG 59.823 50.000 0.00 0.00 0.00 3.53
221 222 2.445525 GGGCATTTGGGACTTATAGGGA 59.554 50.000 0.00 0.00 0.00 4.20
222 223 3.487372 GGCATTTGGGACTTATAGGGAC 58.513 50.000 0.00 0.00 0.00 4.46
223 224 3.138468 GGCATTTGGGACTTATAGGGACT 59.862 47.826 0.00 0.00 46.37 3.85
224 225 4.386424 GGCATTTGGGACTTATAGGGACTT 60.386 45.833 0.00 0.00 41.75 3.01
225 226 5.163131 GGCATTTGGGACTTATAGGGACTTA 60.163 44.000 0.00 0.00 41.75 2.24
226 227 6.467339 GGCATTTGGGACTTATAGGGACTTAT 60.467 42.308 0.00 0.00 41.75 1.73
227 228 7.256908 GGCATTTGGGACTTATAGGGACTTATA 60.257 40.741 0.00 0.00 41.75 0.98
228 229 7.824779 GCATTTGGGACTTATAGGGACTTATAG 59.175 40.741 0.00 0.00 41.75 1.31
229 230 8.881262 CATTTGGGACTTATAGGGACTTATAGT 58.119 37.037 0.00 0.00 41.75 2.12
230 231 8.865244 TTTGGGACTTATAGGGACTTATAGTT 57.135 34.615 0.00 0.00 41.75 2.24
231 232 7.850935 TGGGACTTATAGGGACTTATAGTTG 57.149 40.000 0.00 0.00 41.75 3.16
232 233 7.367828 TGGGACTTATAGGGACTTATAGTTGT 58.632 38.462 0.00 0.00 41.75 3.32
233 234 8.513658 TGGGACTTATAGGGACTTATAGTTGTA 58.486 37.037 0.00 0.00 41.75 2.41
234 235 9.372189 GGGACTTATAGGGACTTATAGTTGTAA 57.628 37.037 0.00 0.00 41.75 2.41
243 244 9.448587 AGGGACTTATAGTTGTAATATGGTCTT 57.551 33.333 0.00 0.00 27.25 3.01
274 275 7.074653 ACTTATAAGTCTCAGGAACCAAACA 57.925 36.000 12.50 0.00 32.86 2.83
275 276 7.162082 ACTTATAAGTCTCAGGAACCAAACAG 58.838 38.462 12.50 0.00 32.86 3.16
276 277 2.938956 AGTCTCAGGAACCAAACAGG 57.061 50.000 0.00 0.00 45.67 4.00
291 292 6.327279 CCAAACAGGTAAGGACTTTTTAGG 57.673 41.667 0.00 0.00 0.00 2.69
292 293 5.243060 CCAAACAGGTAAGGACTTTTTAGGG 59.757 44.000 0.00 0.00 0.00 3.53
293 294 5.917545 AACAGGTAAGGACTTTTTAGGGA 57.082 39.130 0.00 0.00 0.00 4.20
294 295 5.238624 ACAGGTAAGGACTTTTTAGGGAC 57.761 43.478 0.00 0.00 0.00 4.46
295 296 4.912133 ACAGGTAAGGACTTTTTAGGGACT 59.088 41.667 0.00 0.00 46.37 3.85
296 297 5.371769 ACAGGTAAGGACTTTTTAGGGACTT 59.628 40.000 0.00 0.00 41.75 3.01
297 298 5.705905 CAGGTAAGGACTTTTTAGGGACTTG 59.294 44.000 0.00 0.00 41.75 3.16
298 299 5.609708 AGGTAAGGACTTTTTAGGGACTTGA 59.390 40.000 0.00 0.00 41.75 3.02
299 300 5.938710 GGTAAGGACTTTTTAGGGACTTGAG 59.061 44.000 0.00 0.00 41.75 3.02
300 301 5.906772 AAGGACTTTTTAGGGACTTGAGA 57.093 39.130 0.00 0.00 41.75 3.27
301 302 5.230323 AGGACTTTTTAGGGACTTGAGAC 57.770 43.478 0.00 0.00 41.75 3.36
302 303 4.908481 AGGACTTTTTAGGGACTTGAGACT 59.092 41.667 0.00 0.00 41.75 3.24
303 304 5.369993 AGGACTTTTTAGGGACTTGAGACTT 59.630 40.000 0.00 0.00 41.75 3.01
304 305 6.557633 AGGACTTTTTAGGGACTTGAGACTTA 59.442 38.462 0.00 0.00 41.75 2.24
305 306 7.237887 AGGACTTTTTAGGGACTTGAGACTTAT 59.762 37.037 0.00 0.00 41.75 1.73
306 307 8.537858 GGACTTTTTAGGGACTTGAGACTTATA 58.462 37.037 0.00 0.00 41.75 0.98
307 308 9.939802 GACTTTTTAGGGACTTGAGACTTATAA 57.060 33.333 0.00 0.00 41.75 0.98
308 309 9.945904 ACTTTTTAGGGACTTGAGACTTATAAG 57.054 33.333 11.05 11.05 41.75 1.73
309 310 9.945904 CTTTTTAGGGACTTGAGACTTATAAGT 57.054 33.333 18.05 18.05 40.66 2.24
311 312 9.720769 TTTTAGGGACTTGAGACTTATAAGTTG 57.279 33.333 18.96 9.81 38.78 3.16
312 313 6.301169 AGGGACTTGAGACTTATAAGTTGG 57.699 41.667 18.96 10.07 34.84 3.77
313 314 5.189934 AGGGACTTGAGACTTATAAGTTGGG 59.810 44.000 18.96 10.37 34.84 4.12
314 315 5.189145 GGGACTTGAGACTTATAAGTTGGGA 59.811 44.000 18.96 6.15 39.88 4.37
315 316 6.107343 GGACTTGAGACTTATAAGTTGGGAC 58.893 44.000 18.96 6.39 39.88 4.46
316 317 6.070710 GGACTTGAGACTTATAAGTTGGGACT 60.071 42.308 18.96 10.98 39.88 3.85
317 318 7.123847 GGACTTGAGACTTATAAGTTGGGACTA 59.876 40.741 18.96 6.16 39.88 2.59
318 319 8.431910 ACTTGAGACTTATAAGTTGGGACTAA 57.568 34.615 18.96 2.28 39.88 2.24
319 320 8.877195 ACTTGAGACTTATAAGTTGGGACTAAA 58.123 33.333 18.96 9.53 39.88 1.85
320 321 9.720769 CTTGAGACTTATAAGTTGGGACTAAAA 57.279 33.333 18.96 8.46 39.88 1.52
355 356 9.588096 AGGACTTATGAACTTTTTCAATAGGTT 57.412 29.630 0.00 0.00 45.01 3.50
381 382 2.721906 TCCCATTGGTTTTTCTCCCTCT 59.278 45.455 1.20 0.00 0.00 3.69
424 1573 6.346096 CATTAAGGGGAGATCTTGTTTCGTA 58.654 40.000 0.00 0.00 0.00 3.43
425 1574 6.555463 TTAAGGGGAGATCTTGTTTCGTAT 57.445 37.500 0.00 0.00 0.00 3.06
429 1578 5.189934 AGGGGAGATCTTGTTTCGTATTTCT 59.810 40.000 0.00 0.00 0.00 2.52
439 1588 7.716123 TCTTGTTTCGTATTTCTTTTGGTAGGA 59.284 33.333 0.00 0.00 0.00 2.94
513 1662 6.484818 TGCATCATATATGTGAAATCACCG 57.515 37.500 12.42 0.00 45.88 4.94
524 1673 5.556915 TGTGAAATCACCGTCCTAAAAGAT 58.443 37.500 10.83 0.00 45.88 2.40
596 1745 9.699410 ATTCCTTCATAACAAATCACTAATCCA 57.301 29.630 0.00 0.00 0.00 3.41
597 1746 9.527157 TTCCTTCATAACAAATCACTAATCCAA 57.473 29.630 0.00 0.00 0.00 3.53
598 1747 9.699410 TCCTTCATAACAAATCACTAATCCAAT 57.301 29.630 0.00 0.00 0.00 3.16
631 2538 9.941325 AGACATAAGATATTCCTTCAAGCATAG 57.059 33.333 0.00 0.00 0.00 2.23
632 2539 9.935241 GACATAAGATATTCCTTCAAGCATAGA 57.065 33.333 0.00 0.00 0.00 1.98
756 4586 8.690203 TGAATTGAATCAACTCTTACCAAAGA 57.310 30.769 6.01 0.00 39.47 2.52
769 4599 5.298276 TCTTACCAAAGAAAGCACGAAACAT 59.702 36.000 0.00 0.00 38.81 2.71
773 4603 4.618489 CCAAAGAAAGCACGAAACATGATC 59.382 41.667 0.00 0.00 0.00 2.92
774 4604 5.455392 CAAAGAAAGCACGAAACATGATCT 58.545 37.500 0.00 0.00 0.00 2.75
792 4622 6.829985 TGATCTCTCCTTAATGGGATTTGA 57.170 37.500 0.00 0.00 34.56 2.69
798 4628 8.971073 TCTCTCCTTAATGGGATTTGATTTTTC 58.029 33.333 0.00 0.00 34.56 2.29
801 4631 9.895138 CTCCTTAATGGGATTTGATTTTTCAAT 57.105 29.630 0.00 0.00 34.56 2.57
804 4634 8.804912 TTAATGGGATTTGATTTTTCAATGGG 57.195 30.769 0.00 0.00 0.00 4.00
809 4639 4.906747 TTTGATTTTTCAATGGGAGGGG 57.093 40.909 0.00 0.00 0.00 4.79
811 4641 2.113414 TGATTTTTCAATGGGAGGGGGT 59.887 45.455 0.00 0.00 0.00 4.95
816 5141 0.623324 TCAATGGGAGGGGGTAGTGG 60.623 60.000 0.00 0.00 0.00 4.00
827 5152 2.356780 GGTAGTGGGAGGTGGGACG 61.357 68.421 0.00 0.00 0.00 4.79
830 5155 0.613853 TAGTGGGAGGTGGGACGAAG 60.614 60.000 0.00 0.00 0.00 3.79
856 5658 9.558648 GTAAAATCGGACAAAAATAAACCGTAT 57.441 29.630 0.00 0.00 43.36 3.06
868 5670 2.685850 AACCGTATCAGGCTACCAAC 57.314 50.000 0.00 0.00 33.69 3.77
870 5672 1.480954 ACCGTATCAGGCTACCAACTG 59.519 52.381 0.00 0.00 36.07 3.16
873 5675 2.418746 CGTATCAGGCTACCAACTGCTT 60.419 50.000 0.00 0.00 34.76 3.91
874 5676 3.181479 CGTATCAGGCTACCAACTGCTTA 60.181 47.826 0.00 0.00 34.76 3.09
879 5681 4.009675 CAGGCTACCAACTGCTTAATTGA 58.990 43.478 0.00 0.00 0.00 2.57
891 5693 9.160496 CAACTGCTTAATTGAGAGTAGAGATTT 57.840 33.333 0.58 0.00 31.20 2.17
892 5694 8.940768 ACTGCTTAATTGAGAGTAGAGATTTC 57.059 34.615 0.58 0.00 31.20 2.17
893 5695 7.704472 ACTGCTTAATTGAGAGTAGAGATTTCG 59.296 37.037 0.58 0.00 31.20 3.46
894 5696 7.772166 TGCTTAATTGAGAGTAGAGATTTCGA 58.228 34.615 0.58 0.00 0.00 3.71
895 5697 8.417106 TGCTTAATTGAGAGTAGAGATTTCGAT 58.583 33.333 0.58 0.00 0.00 3.59
896 5698 9.255304 GCTTAATTGAGAGTAGAGATTTCGATT 57.745 33.333 0.58 0.00 0.00 3.34
898 5700 9.751542 TTAATTGAGAGTAGAGATTTCGATTCC 57.248 33.333 0.00 0.00 0.00 3.01
899 5701 5.776173 TGAGAGTAGAGATTTCGATTCCC 57.224 43.478 0.00 0.00 0.00 3.97
900 5702 4.585162 TGAGAGTAGAGATTTCGATTCCCC 59.415 45.833 0.00 0.00 0.00 4.81
913 5715 5.337578 TCGATTCCCCATTTGATTTTTCC 57.662 39.130 0.00 0.00 0.00 3.13
918 5720 3.649981 TCCCCATTTGATTTTTCCTTGCA 59.350 39.130 0.00 0.00 0.00 4.08
932 5734 1.334960 CCTTGCACACGTGGTCAATTC 60.335 52.381 21.57 1.08 0.00 2.17
933 5735 1.333308 CTTGCACACGTGGTCAATTCA 59.667 47.619 21.57 3.72 0.00 2.57
968 5778 0.248661 TTGCTGATCTCTCGCGCTAC 60.249 55.000 5.56 0.00 0.00 3.58
982 6178 4.127907 TCGCGCTACATATATAGCTAGCT 58.872 43.478 23.12 23.12 44.60 3.32
1008 6208 0.032130 AGCAGTACACCACACTCGTG 59.968 55.000 0.00 0.00 43.21 4.35
1009 6209 1.557443 GCAGTACACCACACTCGTGC 61.557 60.000 0.00 0.00 42.17 5.34
1012 6212 0.320421 GTACACCACACTCGTGCCAT 60.320 55.000 0.00 0.00 42.17 4.40
1015 6215 0.603707 CACCACACTCGTGCCATCTT 60.604 55.000 0.00 0.00 42.17 2.40
1016 6216 0.973632 ACCACACTCGTGCCATCTTA 59.026 50.000 0.00 0.00 42.17 2.10
1017 6217 1.066858 ACCACACTCGTGCCATCTTAG 60.067 52.381 0.00 0.00 42.17 2.18
1018 6218 1.002366 CACACTCGTGCCATCTTAGC 58.998 55.000 0.00 0.00 36.06 3.09
1019 6219 0.898320 ACACTCGTGCCATCTTAGCT 59.102 50.000 0.00 0.00 0.00 3.32
1020 6220 1.276421 ACACTCGTGCCATCTTAGCTT 59.724 47.619 0.00 0.00 0.00 3.74
1021 6221 1.662629 CACTCGTGCCATCTTAGCTTG 59.337 52.381 0.00 0.00 0.00 4.01
1022 6222 1.293924 CTCGTGCCATCTTAGCTTGG 58.706 55.000 0.00 0.00 36.03 3.61
1024 6224 1.097547 CGTGCCATCTTAGCTTGGGG 61.098 60.000 4.36 0.32 33.40 4.96
1025 6225 1.076777 TGCCATCTTAGCTTGGGGC 60.077 57.895 4.36 9.32 41.70 5.80
1027 6227 0.684153 GCCATCTTAGCTTGGGGCAA 60.684 55.000 4.36 0.00 44.79 4.52
1028 6228 1.106285 CCATCTTAGCTTGGGGCAAC 58.894 55.000 0.00 0.00 44.79 4.17
1029 6229 0.734889 CATCTTAGCTTGGGGCAACG 59.265 55.000 0.00 0.00 44.79 4.10
1030 6230 0.618458 ATCTTAGCTTGGGGCAACGA 59.382 50.000 0.00 0.00 44.79 3.85
1031 6231 0.036388 TCTTAGCTTGGGGCAACGAG 60.036 55.000 0.00 0.00 44.79 4.18
1032 6232 0.036388 CTTAGCTTGGGGCAACGAGA 60.036 55.000 0.00 0.00 44.79 4.04
1033 6233 0.618458 TTAGCTTGGGGCAACGAGAT 59.382 50.000 0.00 0.00 44.79 2.75
1034 6234 0.178068 TAGCTTGGGGCAACGAGATC 59.822 55.000 0.00 0.00 44.79 2.75
1035 6235 1.377202 GCTTGGGGCAACGAGATCA 60.377 57.895 0.00 0.00 41.35 2.92
1036 6236 0.960364 GCTTGGGGCAACGAGATCAA 60.960 55.000 0.00 0.00 41.35 2.57
1037 6237 1.533625 CTTGGGGCAACGAGATCAAA 58.466 50.000 0.00 0.00 37.60 2.69
1038 6238 1.470098 CTTGGGGCAACGAGATCAAAG 59.530 52.381 0.00 0.00 37.60 2.77
1039 6239 0.400213 TGGGGCAACGAGATCAAAGT 59.600 50.000 0.00 0.00 37.60 2.66
1040 6240 0.804989 GGGGCAACGAGATCAAAGTG 59.195 55.000 0.00 0.00 37.60 3.16
1041 6241 0.804989 GGGCAACGAGATCAAAGTGG 59.195 55.000 0.00 0.00 37.60 4.00
1054 6254 4.655762 TCAAAGTGGATCGATAGTCCAG 57.344 45.455 6.48 0.00 43.53 3.86
1079 6279 0.829333 CTAGCTGAGCCATGGTGTCT 59.171 55.000 14.67 1.11 0.00 3.41
1080 6280 0.538584 TAGCTGAGCCATGGTGTCTG 59.461 55.000 14.67 14.77 0.00 3.51
1081 6281 1.748122 GCTGAGCCATGGTGTCTGG 60.748 63.158 14.67 8.96 36.81 3.86
1124 6324 4.204891 CCGTCGACGCAATTCGCC 62.205 66.667 31.73 0.00 43.23 5.54
1961 7241 2.203998 CCCACCCAGTCCCACTCT 60.204 66.667 0.00 0.00 0.00 3.24
2026 7312 2.126307 CGAGACAGCCACCGTGAG 60.126 66.667 0.00 0.00 0.00 3.51
2144 7502 1.376683 GCTGTTCGTGGCCACCATA 60.377 57.895 29.95 14.04 35.28 2.74
2662 8041 3.055819 TGCTTCAGGGAGTCATTCTACAC 60.056 47.826 0.00 0.00 0.00 2.90
2879 8282 0.749454 ATGGCAGCAAGATCCGTTCC 60.749 55.000 0.00 0.00 0.00 3.62
2903 8306 4.390297 GCTGATCACTAACCAAAGACAGAC 59.610 45.833 0.00 0.00 0.00 3.51
2911 8314 4.437682 AACCAAAGACAGACAGATCCAA 57.562 40.909 0.00 0.00 0.00 3.53
2913 8316 2.746362 CCAAAGACAGACAGATCCAAGC 59.254 50.000 0.00 0.00 0.00 4.01
2915 8318 3.996921 AAGACAGACAGATCCAAGCAT 57.003 42.857 0.00 0.00 0.00 3.79
2916 8319 3.263489 AGACAGACAGATCCAAGCATG 57.737 47.619 0.00 0.00 0.00 4.06
2930 8333 2.988493 CAAGCATGGAACCGAAATTGTG 59.012 45.455 0.00 0.00 0.00 3.33
2938 8341 7.627513 GCATGGAACCGAAATTGTGTAGAAATA 60.628 37.037 0.00 0.00 0.00 1.40
2939 8342 7.931578 TGGAACCGAAATTGTGTAGAAATAT 57.068 32.000 0.00 0.00 0.00 1.28
3006 8445 4.904895 AGATGGATCATGGATCGATTGT 57.095 40.909 0.00 0.00 37.56 2.71
3069 9330 0.606604 ACTGTACAAGTAGCGGGTGG 59.393 55.000 0.00 0.00 37.36 4.61
3112 9373 0.323360 CCGCATTTCCAGGAAAGGGA 60.323 55.000 24.59 1.21 34.49 4.20
3127 9429 3.433306 AAGGGATGATTGTTCCAACGA 57.567 42.857 0.00 0.00 34.77 3.85
3151 9453 3.804325 AGTTTGTTGAGTCGTCATGTGAG 59.196 43.478 0.00 0.00 30.85 3.51
3164 10255 4.550831 CGTCATGTGAGTGAAACAGTGAAC 60.551 45.833 0.00 0.00 41.43 3.18
3198 10289 3.863424 ACTATCAAAATCGTAGCACACCG 59.137 43.478 0.00 0.00 0.00 4.94
3223 10314 0.105408 AAGCCTTTGCAACAAGCCTG 59.895 50.000 0.00 0.00 44.83 4.85
3224 10315 1.957695 GCCTTTGCAACAAGCCTGC 60.958 57.895 0.00 0.00 44.83 4.85
3225 10316 1.301165 CCTTTGCAACAAGCCTGCC 60.301 57.895 0.00 0.00 44.83 4.85
3226 10317 1.744014 CTTTGCAACAAGCCTGCCT 59.256 52.632 0.00 0.00 44.83 4.75
3228 10319 1.042003 TTTGCAACAAGCCTGCCTCA 61.042 50.000 0.00 0.00 44.83 3.86
3238 10329 2.338015 CCTGCCTCATGTTGCGCTT 61.338 57.895 9.73 0.00 0.00 4.68
3241 10332 0.036483 TGCCTCATGTTGCGCTTAGA 60.036 50.000 9.73 0.00 0.00 2.10
3243 10334 2.009042 GCCTCATGTTGCGCTTAGAGT 61.009 52.381 9.73 0.00 0.00 3.24
3261 10352 4.144297 AGAGTTTTGCAACATGAGCCTTA 58.856 39.130 0.00 0.00 35.05 2.69
3263 10354 4.813027 AGTTTTGCAACATGAGCCTTATG 58.187 39.130 0.00 0.00 35.05 1.90
3283 10374 2.103941 TGGCATCCCCAAACAGTTTTTC 59.896 45.455 0.00 0.00 41.82 2.29
3284 10375 2.103941 GGCATCCCCAAACAGTTTTTCA 59.896 45.455 0.00 0.00 0.00 2.69
3308 10399 3.682766 TTTTTCTACACGGTCCGCA 57.317 47.368 12.28 0.00 0.00 5.69
3311 10402 1.950828 TTTCTACACGGTCCGCAAAA 58.049 45.000 12.28 2.27 0.00 2.44
3312 10403 2.172851 TTCTACACGGTCCGCAAAAT 57.827 45.000 12.28 0.00 0.00 1.82
3313 10404 3.316071 TTCTACACGGTCCGCAAAATA 57.684 42.857 12.28 0.00 0.00 1.40
3315 10406 3.864243 TCTACACGGTCCGCAAAATAAT 58.136 40.909 12.28 0.00 0.00 1.28
3317 10408 3.481112 ACACGGTCCGCAAAATAATTC 57.519 42.857 12.28 0.00 0.00 2.17
3318 10409 2.814919 ACACGGTCCGCAAAATAATTCA 59.185 40.909 12.28 0.00 0.00 2.57
3319 10410 3.442273 ACACGGTCCGCAAAATAATTCAT 59.558 39.130 12.28 0.00 0.00 2.57
3320 10411 4.636648 ACACGGTCCGCAAAATAATTCATA 59.363 37.500 12.28 0.00 0.00 2.15
3355 10447 4.114794 GTCTTGCAATAATGGCCATGTTC 58.885 43.478 21.63 11.56 0.00 3.18
3356 10448 3.768215 TCTTGCAATAATGGCCATGTTCA 59.232 39.130 21.63 13.71 0.00 3.18
3358 10450 4.548451 TGCAATAATGGCCATGTTCAAA 57.452 36.364 21.63 1.23 0.00 2.69
3359 10451 4.505808 TGCAATAATGGCCATGTTCAAAG 58.494 39.130 21.63 7.17 0.00 2.77
3366 10468 0.609662 GCCATGTTCAAAGGGCACAT 59.390 50.000 0.00 0.00 45.70 3.21
3391 10493 4.796231 GTGGACGACGCGGCAGAT 62.796 66.667 14.85 0.00 36.10 2.90
3392 10494 4.794439 TGGACGACGCGGCAGATG 62.794 66.667 14.85 0.00 36.10 2.90
3408 10510 2.813779 GATGTTTCGCATCCACTCAC 57.186 50.000 0.00 0.00 46.26 3.51
3410 10512 0.605319 TGTTTCGCATCCACTCACCC 60.605 55.000 0.00 0.00 0.00 4.61
3411 10513 0.605319 GTTTCGCATCCACTCACCCA 60.605 55.000 0.00 0.00 0.00 4.51
3412 10514 0.327924 TTTCGCATCCACTCACCCAT 59.672 50.000 0.00 0.00 0.00 4.00
3413 10515 0.327924 TTCGCATCCACTCACCCATT 59.672 50.000 0.00 0.00 0.00 3.16
3414 10516 0.327924 TCGCATCCACTCACCCATTT 59.672 50.000 0.00 0.00 0.00 2.32
3415 10517 1.176527 CGCATCCACTCACCCATTTT 58.823 50.000 0.00 0.00 0.00 1.82
3416 10518 2.026729 TCGCATCCACTCACCCATTTTA 60.027 45.455 0.00 0.00 0.00 1.52
3417 10519 2.752354 CGCATCCACTCACCCATTTTAA 59.248 45.455 0.00 0.00 0.00 1.52
3418 10520 3.192422 CGCATCCACTCACCCATTTTAAA 59.808 43.478 0.00 0.00 0.00 1.52
3419 10521 4.494484 GCATCCACTCACCCATTTTAAAC 58.506 43.478 0.00 0.00 0.00 2.01
3430 10585 4.994217 ACCCATTTTAAACCATTTTCTGCG 59.006 37.500 0.00 0.00 0.00 5.18
3431 10586 4.391523 CCCATTTTAAACCATTTTCTGCGG 59.608 41.667 0.00 0.00 0.00 5.69
3455 10611 8.375465 CGGAAGAACAAATTATTCAGCATTTTC 58.625 33.333 5.44 0.63 37.71 2.29
3456 10612 9.428097 GGAAGAACAAATTATTCAGCATTTTCT 57.572 29.630 5.44 0.00 37.71 2.52
3504 10680 6.585389 AAGAGAAAAGTCTTGTAACGTCAC 57.415 37.500 0.00 0.00 35.37 3.67
3505 10681 5.048507 AGAGAAAAGTCTTGTAACGTCACC 58.951 41.667 0.00 0.00 32.80 4.02
3506 10682 3.800506 AGAAAAGTCTTGTAACGTCACCG 59.199 43.478 0.00 0.00 40.83 4.94
3527 10714 3.049912 GACCAAAATCTTGTCGCAAACC 58.950 45.455 0.00 0.00 0.00 3.27
3545 10732 5.581085 GCAAACCGATCAGTTACATCTTACT 59.419 40.000 0.00 0.00 0.00 2.24
3548 10735 4.880120 ACCGATCAGTTACATCTTACTCGA 59.120 41.667 0.00 0.00 0.00 4.04
3553 10740 3.180584 CAGTTACATCTTACTCGATGCGC 59.819 47.826 0.00 0.00 43.54 6.09
3556 10743 0.772926 CATCTTACTCGATGCGCGTC 59.227 55.000 19.84 19.84 41.80 5.19
3597 10786 3.342269 GTGTGTTCATATTAACGCGCAG 58.658 45.455 17.69 2.42 45.29 5.18
3612 10801 1.144936 GCAGACCTCCAAGATCCGG 59.855 63.158 0.00 0.00 0.00 5.14
3613 10802 1.144936 CAGACCTCCAAGATCCGGC 59.855 63.158 0.00 0.00 0.00 6.13
3626 10817 4.558226 AGATCCGGCATCAATATTGCTA 57.442 40.909 10.76 0.00 40.03 3.49
3627 10818 4.910195 AGATCCGGCATCAATATTGCTAA 58.090 39.130 10.76 0.00 40.03 3.09
3628 10819 4.697352 AGATCCGGCATCAATATTGCTAAC 59.303 41.667 10.76 0.43 40.03 2.34
3629 10820 4.085357 TCCGGCATCAATATTGCTAACT 57.915 40.909 10.76 0.00 40.03 2.24
3630 10821 5.222079 TCCGGCATCAATATTGCTAACTA 57.778 39.130 10.76 0.00 40.03 2.24
3631 10822 4.994852 TCCGGCATCAATATTGCTAACTAC 59.005 41.667 10.76 0.00 40.03 2.73
3632 10823 4.997395 CCGGCATCAATATTGCTAACTACT 59.003 41.667 10.76 0.00 40.03 2.57
3633 10824 5.120830 CCGGCATCAATATTGCTAACTACTC 59.879 44.000 10.76 0.00 40.03 2.59
3634 10825 5.120830 CGGCATCAATATTGCTAACTACTCC 59.879 44.000 10.76 1.44 40.03 3.85
3635 10826 5.412904 GGCATCAATATTGCTAACTACTCCC 59.587 44.000 10.76 0.00 40.03 4.30
3636 10827 6.234177 GCATCAATATTGCTAACTACTCCCT 58.766 40.000 10.76 0.00 37.14 4.20
3637 10828 6.370166 GCATCAATATTGCTAACTACTCCCTC 59.630 42.308 10.76 0.00 37.14 4.30
3638 10829 6.420913 TCAATATTGCTAACTACTCCCTCC 57.579 41.667 10.76 0.00 0.00 4.30
3639 10830 5.010719 TCAATATTGCTAACTACTCCCTCCG 59.989 44.000 10.76 0.00 0.00 4.63
3640 10831 2.226962 TTGCTAACTACTCCCTCCGT 57.773 50.000 0.00 0.00 0.00 4.69
3641 10832 1.760192 TGCTAACTACTCCCTCCGTC 58.240 55.000 0.00 0.00 0.00 4.79
3642 10833 1.031235 GCTAACTACTCCCTCCGTCC 58.969 60.000 0.00 0.00 0.00 4.79
3643 10834 1.689984 CTAACTACTCCCTCCGTCCC 58.310 60.000 0.00 0.00 0.00 4.46
3644 10835 1.002069 TAACTACTCCCTCCGTCCCA 58.998 55.000 0.00 0.00 0.00 4.37
3645 10836 0.115745 AACTACTCCCTCCGTCCCAA 59.884 55.000 0.00 0.00 0.00 4.12
3646 10837 0.115745 ACTACTCCCTCCGTCCCAAA 59.884 55.000 0.00 0.00 0.00 3.28
3647 10838 1.272807 CTACTCCCTCCGTCCCAAAA 58.727 55.000 0.00 0.00 0.00 2.44
3648 10839 1.838077 CTACTCCCTCCGTCCCAAAAT 59.162 52.381 0.00 0.00 0.00 1.82
3649 10840 1.961133 ACTCCCTCCGTCCCAAAATA 58.039 50.000 0.00 0.00 0.00 1.40
3650 10841 2.488836 ACTCCCTCCGTCCCAAAATAT 58.511 47.619 0.00 0.00 0.00 1.28
3651 10842 3.660959 ACTCCCTCCGTCCCAAAATATA 58.339 45.455 0.00 0.00 0.00 0.86
3652 10843 4.042174 ACTCCCTCCGTCCCAAAATATAA 58.958 43.478 0.00 0.00 0.00 0.98
3653 10844 4.102681 ACTCCCTCCGTCCCAAAATATAAG 59.897 45.833 0.00 0.00 0.00 1.73
3654 10845 4.300345 TCCCTCCGTCCCAAAATATAAGA 58.700 43.478 0.00 0.00 0.00 2.10
3655 10846 4.722781 TCCCTCCGTCCCAAAATATAAGAA 59.277 41.667 0.00 0.00 0.00 2.52
3656 10847 4.820173 CCCTCCGTCCCAAAATATAAGAAC 59.180 45.833 0.00 0.00 0.00 3.01
3657 10848 4.510340 CCTCCGTCCCAAAATATAAGAACG 59.490 45.833 0.00 0.00 0.00 3.95
3658 10849 5.088680 TCCGTCCCAAAATATAAGAACGT 57.911 39.130 0.00 0.00 0.00 3.99
3659 10850 5.490159 TCCGTCCCAAAATATAAGAACGTT 58.510 37.500 0.00 0.00 0.00 3.99
3660 10851 5.939296 TCCGTCCCAAAATATAAGAACGTTT 59.061 36.000 0.46 0.00 0.00 3.60
3661 10852 6.430616 TCCGTCCCAAAATATAAGAACGTTTT 59.569 34.615 0.46 0.00 0.00 2.43
3662 10853 7.040548 TCCGTCCCAAAATATAAGAACGTTTTT 60.041 33.333 9.22 9.22 0.00 1.94
3680 10871 3.644966 TTTTGCACTATACTGGGGGAG 57.355 47.619 0.00 0.00 0.00 4.30
3701 10892 7.371936 GGGAGTAGTACATATTACTTGAGCTG 58.628 42.308 2.52 0.00 30.19 4.24
3715 10906 8.902540 TTACTTGAGCTGAAAAGACATTTCTA 57.097 30.769 0.00 0.00 46.27 2.10
3729 10920 9.482627 AAAGACATTTCTAGACACTTGTTAGAG 57.517 33.333 0.00 0.00 0.00 2.43
3730 10921 8.410673 AGACATTTCTAGACACTTGTTAGAGA 57.589 34.615 0.00 0.00 0.00 3.10
3736 10927 6.178324 TCTAGACACTTGTTAGAGATTCCGA 58.822 40.000 0.00 0.00 0.00 4.55
3754 10945 4.586884 TCCGAAGAAGTAGTGAGAGCTAA 58.413 43.478 0.00 0.00 0.00 3.09
3756 10947 4.336101 CGAAGAAGTAGTGAGAGCTAACG 58.664 47.826 0.00 0.00 0.00 3.18
3757 10948 4.142859 CGAAGAAGTAGTGAGAGCTAACGT 60.143 45.833 0.00 0.00 0.00 3.99
3760 10951 5.701855 AGAAGTAGTGAGAGCTAACGTTTC 58.298 41.667 5.91 0.00 0.00 2.78
3761 10952 5.474189 AGAAGTAGTGAGAGCTAACGTTTCT 59.526 40.000 5.91 2.83 0.00 2.52
3762 10953 6.654161 AGAAGTAGTGAGAGCTAACGTTTCTA 59.346 38.462 5.91 0.00 0.00 2.10
3767 10958 3.447586 TGAGAGCTAACGTTTCTAGGCAT 59.552 43.478 5.91 0.00 0.00 4.40
3768 10959 4.643334 TGAGAGCTAACGTTTCTAGGCATA 59.357 41.667 5.91 0.00 0.00 3.14
3769 10960 5.302059 TGAGAGCTAACGTTTCTAGGCATAT 59.698 40.000 5.91 0.00 0.00 1.78
3770 10961 6.489022 TGAGAGCTAACGTTTCTAGGCATATA 59.511 38.462 5.91 0.00 0.00 0.86
3771 10962 7.176865 TGAGAGCTAACGTTTCTAGGCATATAT 59.823 37.037 5.91 0.00 0.00 0.86
3773 10964 8.460428 AGAGCTAACGTTTCTAGGCATATATAC 58.540 37.037 5.91 0.00 0.00 1.47
3774 10965 7.249147 AGCTAACGTTTCTAGGCATATATACG 58.751 38.462 5.91 5.50 0.00 3.06
3782 10973 9.379791 GTTTCTAGGCATATATACGGCTTTTAT 57.620 33.333 10.33 0.00 39.09 1.40
3823 11017 4.100808 CCTCTGAAGGACCTTATCTCTTGG 59.899 50.000 6.75 0.14 46.67 3.61
3847 11041 6.858993 GGCTCTTGAGTTACTGAATATACTCG 59.141 42.308 0.00 0.00 39.83 4.18
3848 11042 7.255173 GGCTCTTGAGTTACTGAATATACTCGA 60.255 40.741 0.00 0.00 39.83 4.04
3876 11070 4.971924 AGAGCAACTTGATAGGGGATAAGT 59.028 41.667 0.00 0.00 35.06 2.24
3883 11077 2.438021 TGATAGGGGATAAGTGCACCAC 59.562 50.000 14.63 0.00 34.10 4.16
3895 11089 2.645567 CACCACTGTCTCGTCGCT 59.354 61.111 0.00 0.00 0.00 4.93
3940 11136 7.442666 GGGAAATTTGCACCAAAATGTTACTAA 59.557 33.333 12.05 0.00 36.90 2.24
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
29 30 4.613448 CGTTTTAAAATTGATTCGGTGCGA 59.387 37.500 3.52 0.00 0.00 5.10
30 31 4.613448 TCGTTTTAAAATTGATTCGGTGCG 59.387 37.500 3.52 0.00 0.00 5.34
31 32 6.143278 ACTTCGTTTTAAAATTGATTCGGTGC 59.857 34.615 3.52 0.00 0.00 5.01
32 33 7.377397 TGACTTCGTTTTAAAATTGATTCGGTG 59.623 33.333 3.52 2.14 0.00 4.94
33 34 7.419204 TGACTTCGTTTTAAAATTGATTCGGT 58.581 30.769 3.52 0.00 0.00 4.69
34 35 7.845617 TGACTTCGTTTTAAAATTGATTCGG 57.154 32.000 3.52 0.00 0.00 4.30
77 78 9.679661 TCCATAGCATAAAGAATTGTCTAACAA 57.320 29.630 0.00 0.00 42.95 2.83
78 79 9.851686 ATCCATAGCATAAAGAATTGTCTAACA 57.148 29.630 0.00 0.00 32.16 2.41
89 90 9.338968 ACCCTCTAATTATCCATAGCATAAAGA 57.661 33.333 0.00 0.00 0.00 2.52
90 91 9.388506 CACCCTCTAATTATCCATAGCATAAAG 57.611 37.037 0.00 0.00 0.00 1.85
91 92 8.890472 ACACCCTCTAATTATCCATAGCATAAA 58.110 33.333 0.00 0.00 0.00 1.40
92 93 8.449423 ACACCCTCTAATTATCCATAGCATAA 57.551 34.615 0.00 0.00 0.00 1.90
93 94 8.449423 AACACCCTCTAATTATCCATAGCATA 57.551 34.615 0.00 0.00 0.00 3.14
94 95 6.959606 ACACCCTCTAATTATCCATAGCAT 57.040 37.500 0.00 0.00 0.00 3.79
95 96 6.763715 AACACCCTCTAATTATCCATAGCA 57.236 37.500 0.00 0.00 0.00 3.49
96 97 6.998673 ACAAACACCCTCTAATTATCCATAGC 59.001 38.462 0.00 0.00 0.00 2.97
97 98 8.980481 AACAAACACCCTCTAATTATCCATAG 57.020 34.615 0.00 0.00 0.00 2.23
98 99 9.762381 AAAACAAACACCCTCTAATTATCCATA 57.238 29.630 0.00 0.00 0.00 2.74
99 100 8.664669 AAAACAAACACCCTCTAATTATCCAT 57.335 30.769 0.00 0.00 0.00 3.41
100 101 7.726291 TGAAAACAAACACCCTCTAATTATCCA 59.274 33.333 0.00 0.00 0.00 3.41
101 102 8.117813 TGAAAACAAACACCCTCTAATTATCC 57.882 34.615 0.00 0.00 0.00 2.59
102 103 8.244113 CCTGAAAACAAACACCCTCTAATTATC 58.756 37.037 0.00 0.00 0.00 1.75
103 104 7.947890 TCCTGAAAACAAACACCCTCTAATTAT 59.052 33.333 0.00 0.00 0.00 1.28
104 105 7.291566 TCCTGAAAACAAACACCCTCTAATTA 58.708 34.615 0.00 0.00 0.00 1.40
105 106 6.133356 TCCTGAAAACAAACACCCTCTAATT 58.867 36.000 0.00 0.00 0.00 1.40
106 107 5.701224 TCCTGAAAACAAACACCCTCTAAT 58.299 37.500 0.00 0.00 0.00 1.73
107 108 5.118729 TCCTGAAAACAAACACCCTCTAA 57.881 39.130 0.00 0.00 0.00 2.10
108 109 4.781775 TCCTGAAAACAAACACCCTCTA 57.218 40.909 0.00 0.00 0.00 2.43
109 110 3.662759 TCCTGAAAACAAACACCCTCT 57.337 42.857 0.00 0.00 0.00 3.69
110 111 3.699538 AGTTCCTGAAAACAAACACCCTC 59.300 43.478 0.00 0.00 0.00 4.30
111 112 3.708451 AGTTCCTGAAAACAAACACCCT 58.292 40.909 0.00 0.00 0.00 4.34
112 113 4.465632 AAGTTCCTGAAAACAAACACCC 57.534 40.909 0.00 0.00 0.00 4.61
113 114 6.478673 CCAATAAGTTCCTGAAAACAAACACC 59.521 38.462 0.00 0.00 0.00 4.16
114 115 7.039270 ACCAATAAGTTCCTGAAAACAAACAC 58.961 34.615 0.00 0.00 0.00 3.32
115 116 7.176589 ACCAATAAGTTCCTGAAAACAAACA 57.823 32.000 0.00 0.00 0.00 2.83
116 117 8.487313 AAACCAATAAGTTCCTGAAAACAAAC 57.513 30.769 0.00 0.00 0.00 2.93
117 118 9.810545 CTAAACCAATAAGTTCCTGAAAACAAA 57.189 29.630 0.00 0.00 0.00 2.83
118 119 8.417884 CCTAAACCAATAAGTTCCTGAAAACAA 58.582 33.333 0.00 0.00 0.00 2.83
119 120 7.014808 CCCTAAACCAATAAGTTCCTGAAAACA 59.985 37.037 0.00 0.00 0.00 2.83
120 121 7.231925 TCCCTAAACCAATAAGTTCCTGAAAAC 59.768 37.037 0.00 0.00 0.00 2.43
121 122 7.231925 GTCCCTAAACCAATAAGTTCCTGAAAA 59.768 37.037 0.00 0.00 0.00 2.29
122 123 6.717997 GTCCCTAAACCAATAAGTTCCTGAAA 59.282 38.462 0.00 0.00 0.00 2.69
123 124 6.045106 AGTCCCTAAACCAATAAGTTCCTGAA 59.955 38.462 0.00 0.00 0.00 3.02
124 125 5.550403 AGTCCCTAAACCAATAAGTTCCTGA 59.450 40.000 0.00 0.00 0.00 3.86
125 126 5.816682 AGTCCCTAAACCAATAAGTTCCTG 58.183 41.667 0.00 0.00 0.00 3.86
126 127 6.464530 AAGTCCCTAAACCAATAAGTTCCT 57.535 37.500 0.00 0.00 0.00 3.36
127 128 8.640063 TTTAAGTCCCTAAACCAATAAGTTCC 57.360 34.615 0.00 0.00 0.00 3.62
152 153 9.682465 GTTTAGATGGGACTTATAGGAACTTTT 57.318 33.333 0.00 0.00 41.75 2.27
153 154 8.272889 GGTTTAGATGGGACTTATAGGAACTTT 58.727 37.037 0.00 0.00 41.75 2.66
154 155 7.404980 TGGTTTAGATGGGACTTATAGGAACTT 59.595 37.037 0.00 0.00 41.75 2.66
155 156 6.906901 TGGTTTAGATGGGACTTATAGGAACT 59.093 38.462 0.00 0.00 46.37 3.01
156 157 7.133133 TGGTTTAGATGGGACTTATAGGAAC 57.867 40.000 0.00 0.00 0.00 3.62
157 158 7.758820 TTGGTTTAGATGGGACTTATAGGAA 57.241 36.000 0.00 0.00 0.00 3.36
158 159 7.183112 TGTTTGGTTTAGATGGGACTTATAGGA 59.817 37.037 0.00 0.00 0.00 2.94
159 160 7.343357 TGTTTGGTTTAGATGGGACTTATAGG 58.657 38.462 0.00 0.00 0.00 2.57
160 161 7.499232 CCTGTTTGGTTTAGATGGGACTTATAG 59.501 40.741 0.00 0.00 0.00 1.31
161 162 7.183112 TCCTGTTTGGTTTAGATGGGACTTATA 59.817 37.037 0.00 0.00 37.07 0.98
162 163 6.011981 TCCTGTTTGGTTTAGATGGGACTTAT 60.012 38.462 0.00 0.00 37.07 1.73
163 164 5.311121 TCCTGTTTGGTTTAGATGGGACTTA 59.689 40.000 0.00 0.00 37.07 2.24
164 165 4.105697 TCCTGTTTGGTTTAGATGGGACTT 59.894 41.667 0.00 0.00 37.07 3.01
165 166 3.655777 TCCTGTTTGGTTTAGATGGGACT 59.344 43.478 0.00 0.00 37.07 3.85
166 167 4.010349 CTCCTGTTTGGTTTAGATGGGAC 58.990 47.826 0.00 0.00 37.07 4.46
167 168 3.010138 CCTCCTGTTTGGTTTAGATGGGA 59.990 47.826 0.00 0.00 37.07 4.37
168 169 3.356290 CCTCCTGTTTGGTTTAGATGGG 58.644 50.000 0.00 0.00 37.07 4.00
169 170 3.010138 TCCCTCCTGTTTGGTTTAGATGG 59.990 47.826 0.00 0.00 37.07 3.51
170 171 4.010349 GTCCCTCCTGTTTGGTTTAGATG 58.990 47.826 0.00 0.00 37.07 2.90
171 172 3.916989 AGTCCCTCCTGTTTGGTTTAGAT 59.083 43.478 0.00 0.00 37.07 1.98
172 173 3.323775 AGTCCCTCCTGTTTGGTTTAGA 58.676 45.455 0.00 0.00 37.07 2.10
173 174 3.790089 AGTCCCTCCTGTTTGGTTTAG 57.210 47.619 0.00 0.00 37.07 1.85
174 175 5.649970 TTAAGTCCCTCCTGTTTGGTTTA 57.350 39.130 0.00 0.00 37.07 2.01
175 176 4.529716 TTAAGTCCCTCCTGTTTGGTTT 57.470 40.909 0.00 0.00 37.07 3.27
176 177 4.079385 ACTTTAAGTCCCTCCTGTTTGGTT 60.079 41.667 0.00 0.00 37.07 3.67
177 178 3.462205 ACTTTAAGTCCCTCCTGTTTGGT 59.538 43.478 0.00 0.00 37.07 3.67
178 179 3.821033 CACTTTAAGTCCCTCCTGTTTGG 59.179 47.826 0.00 0.00 37.10 3.28
179 180 3.821033 CCACTTTAAGTCCCTCCTGTTTG 59.179 47.826 0.00 0.00 0.00 2.93
180 181 3.181433 CCCACTTTAAGTCCCTCCTGTTT 60.181 47.826 0.00 0.00 0.00 2.83
181 182 2.375509 CCCACTTTAAGTCCCTCCTGTT 59.624 50.000 0.00 0.00 0.00 3.16
182 183 1.985895 CCCACTTTAAGTCCCTCCTGT 59.014 52.381 0.00 0.00 0.00 4.00
183 184 1.340114 GCCCACTTTAAGTCCCTCCTG 60.340 57.143 0.00 0.00 0.00 3.86
184 185 0.992695 GCCCACTTTAAGTCCCTCCT 59.007 55.000 0.00 0.00 0.00 3.69
185 186 0.696501 TGCCCACTTTAAGTCCCTCC 59.303 55.000 0.00 0.00 0.00 4.30
186 187 2.808906 ATGCCCACTTTAAGTCCCTC 57.191 50.000 0.00 0.00 0.00 4.30
187 188 3.165071 CAAATGCCCACTTTAAGTCCCT 58.835 45.455 0.00 0.00 0.00 4.20
188 189 2.233676 CCAAATGCCCACTTTAAGTCCC 59.766 50.000 0.00 0.00 0.00 4.46
189 190 2.233676 CCCAAATGCCCACTTTAAGTCC 59.766 50.000 0.00 0.00 0.00 3.85
190 191 3.056821 GTCCCAAATGCCCACTTTAAGTC 60.057 47.826 0.00 0.00 0.00 3.01
191 192 2.897326 GTCCCAAATGCCCACTTTAAGT 59.103 45.455 0.00 0.00 0.00 2.24
192 193 3.165071 AGTCCCAAATGCCCACTTTAAG 58.835 45.455 0.00 0.00 0.00 1.85
193 194 3.252554 AGTCCCAAATGCCCACTTTAA 57.747 42.857 0.00 0.00 0.00 1.52
194 195 2.990740 AGTCCCAAATGCCCACTTTA 57.009 45.000 0.00 0.00 0.00 1.85
195 196 2.101640 AAGTCCCAAATGCCCACTTT 57.898 45.000 0.00 0.00 0.00 2.66
196 197 2.990740 TAAGTCCCAAATGCCCACTT 57.009 45.000 0.00 0.00 0.00 3.16
197 198 3.117512 CCTATAAGTCCCAAATGCCCACT 60.118 47.826 0.00 0.00 0.00 4.00
198 199 3.222603 CCTATAAGTCCCAAATGCCCAC 58.777 50.000 0.00 0.00 0.00 4.61
199 200 2.176798 CCCTATAAGTCCCAAATGCCCA 59.823 50.000 0.00 0.00 0.00 5.36
200 201 2.445525 TCCCTATAAGTCCCAAATGCCC 59.554 50.000 0.00 0.00 0.00 5.36
201 202 3.138468 AGTCCCTATAAGTCCCAAATGCC 59.862 47.826 0.00 0.00 0.00 4.40
202 203 4.439253 AGTCCCTATAAGTCCCAAATGC 57.561 45.455 0.00 0.00 0.00 3.56
203 204 8.881262 ACTATAAGTCCCTATAAGTCCCAAATG 58.119 37.037 0.00 0.00 0.00 2.32
204 205 9.461734 AACTATAAGTCCCTATAAGTCCCAAAT 57.538 33.333 0.00 0.00 0.00 2.32
205 206 8.711170 CAACTATAAGTCCCTATAAGTCCCAAA 58.289 37.037 0.00 0.00 0.00 3.28
206 207 7.847848 ACAACTATAAGTCCCTATAAGTCCCAA 59.152 37.037 0.00 0.00 0.00 4.12
207 208 7.367828 ACAACTATAAGTCCCTATAAGTCCCA 58.632 38.462 0.00 0.00 0.00 4.37
208 209 7.852550 ACAACTATAAGTCCCTATAAGTCCC 57.147 40.000 0.00 0.00 0.00 4.46
217 218 9.448587 AAGACCATATTACAACTATAAGTCCCT 57.551 33.333 0.00 0.00 0.00 4.20
250 251 7.074653 TGTTTGGTTCCTGAGACTTATAAGT 57.925 36.000 18.05 18.05 43.16 2.24
251 252 6.595716 CCTGTTTGGTTCCTGAGACTTATAAG 59.404 42.308 11.05 11.05 0.00 1.73
252 253 6.472887 CCTGTTTGGTTCCTGAGACTTATAA 58.527 40.000 0.00 0.00 0.00 0.98
253 254 6.049955 CCTGTTTGGTTCCTGAGACTTATA 57.950 41.667 0.00 0.00 0.00 0.98
254 255 4.911390 CCTGTTTGGTTCCTGAGACTTAT 58.089 43.478 0.00 0.00 0.00 1.73
255 256 4.351874 CCTGTTTGGTTCCTGAGACTTA 57.648 45.455 0.00 0.00 0.00 2.24
256 257 3.214696 CCTGTTTGGTTCCTGAGACTT 57.785 47.619 0.00 0.00 0.00 3.01
257 258 2.938956 CCTGTTTGGTTCCTGAGACT 57.061 50.000 0.00 0.00 0.00 3.24
268 269 5.243060 CCCTAAAAAGTCCTTACCTGTTTGG 59.757 44.000 0.00 0.00 42.93 3.28
269 270 6.016527 GTCCCTAAAAAGTCCTTACCTGTTTG 60.017 42.308 0.00 0.00 0.00 2.93
270 271 6.066690 GTCCCTAAAAAGTCCTTACCTGTTT 58.933 40.000 0.00 0.00 0.00 2.83
271 272 5.371769 AGTCCCTAAAAAGTCCTTACCTGTT 59.628 40.000 0.00 0.00 0.00 3.16
272 273 4.912133 AGTCCCTAAAAAGTCCTTACCTGT 59.088 41.667 0.00 0.00 0.00 4.00
273 274 5.500546 AGTCCCTAAAAAGTCCTTACCTG 57.499 43.478 0.00 0.00 0.00 4.00
274 275 5.609708 TCAAGTCCCTAAAAAGTCCTTACCT 59.390 40.000 0.00 0.00 0.00 3.08
275 276 5.872963 TCAAGTCCCTAAAAAGTCCTTACC 58.127 41.667 0.00 0.00 0.00 2.85
276 277 6.649973 GTCTCAAGTCCCTAAAAAGTCCTTAC 59.350 42.308 0.00 0.00 0.00 2.34
277 278 6.557633 AGTCTCAAGTCCCTAAAAAGTCCTTA 59.442 38.462 0.00 0.00 0.00 2.69
278 279 5.369993 AGTCTCAAGTCCCTAAAAAGTCCTT 59.630 40.000 0.00 0.00 0.00 3.36
279 280 4.908481 AGTCTCAAGTCCCTAAAAAGTCCT 59.092 41.667 0.00 0.00 0.00 3.85
280 281 5.230323 AGTCTCAAGTCCCTAAAAAGTCC 57.770 43.478 0.00 0.00 0.00 3.85
281 282 9.939802 TTATAAGTCTCAAGTCCCTAAAAAGTC 57.060 33.333 0.00 0.00 0.00 3.01
282 283 9.945904 CTTATAAGTCTCAAGTCCCTAAAAAGT 57.054 33.333 4.18 0.00 0.00 2.66
283 284 9.945904 ACTTATAAGTCTCAAGTCCCTAAAAAG 57.054 33.333 12.50 0.00 32.86 2.27
285 286 9.720769 CAACTTATAAGTCTCAAGTCCCTAAAA 57.279 33.333 18.28 0.00 38.57 1.52
286 287 8.319146 CCAACTTATAAGTCTCAAGTCCCTAAA 58.681 37.037 18.28 0.00 38.57 1.85
287 288 7.093024 CCCAACTTATAAGTCTCAAGTCCCTAA 60.093 40.741 18.28 0.00 38.57 2.69
288 289 6.383147 CCCAACTTATAAGTCTCAAGTCCCTA 59.617 42.308 18.28 0.00 38.57 3.53
289 290 5.189934 CCCAACTTATAAGTCTCAAGTCCCT 59.810 44.000 18.28 0.00 38.57 4.20
290 291 5.189145 TCCCAACTTATAAGTCTCAAGTCCC 59.811 44.000 18.28 0.00 38.57 4.46
291 292 6.070710 AGTCCCAACTTATAAGTCTCAAGTCC 60.071 42.308 18.28 3.21 38.57 3.85
292 293 6.937392 AGTCCCAACTTATAAGTCTCAAGTC 58.063 40.000 18.28 6.78 38.57 3.01
293 294 6.936968 AGTCCCAACTTATAAGTCTCAAGT 57.063 37.500 18.28 5.74 38.57 3.16
294 295 9.720769 TTTTAGTCCCAACTTATAAGTCTCAAG 57.279 33.333 18.28 6.66 38.57 3.02
329 330 9.588096 AACCTATTGAAAAAGTTCATAAGTCCT 57.412 29.630 0.00 0.00 43.29 3.85
336 337 9.764363 GGAGAAAAACCTATTGAAAAAGTTCAT 57.236 29.630 0.00 0.00 43.29 2.57
337 338 8.201464 GGGAGAAAAACCTATTGAAAAAGTTCA 58.799 33.333 0.00 0.00 42.12 3.18
338 339 8.201464 TGGGAGAAAAACCTATTGAAAAAGTTC 58.799 33.333 0.00 0.00 0.00 3.01
339 340 8.084985 TGGGAGAAAAACCTATTGAAAAAGTT 57.915 30.769 0.00 0.00 0.00 2.66
340 341 7.669089 TGGGAGAAAAACCTATTGAAAAAGT 57.331 32.000 0.00 0.00 0.00 2.66
348 349 7.387265 AAAACCAATGGGAGAAAAACCTATT 57.613 32.000 3.55 0.00 38.73 1.73
349 350 7.292356 AGAAAAACCAATGGGAGAAAAACCTAT 59.708 33.333 3.55 0.00 38.05 2.57
350 351 6.613679 AGAAAAACCAATGGGAGAAAAACCTA 59.386 34.615 3.55 0.00 38.05 3.08
351 352 5.428457 AGAAAAACCAATGGGAGAAAAACCT 59.572 36.000 3.55 0.00 38.05 3.50
352 353 5.680619 AGAAAAACCAATGGGAGAAAAACC 58.319 37.500 3.55 0.00 38.05 3.27
353 354 5.758296 GGAGAAAAACCAATGGGAGAAAAAC 59.242 40.000 3.55 0.00 38.05 2.43
354 355 5.163248 GGGAGAAAAACCAATGGGAGAAAAA 60.163 40.000 3.55 0.00 38.05 1.94
355 356 4.346709 GGGAGAAAAACCAATGGGAGAAAA 59.653 41.667 3.55 0.00 38.05 2.29
356 357 3.901222 GGGAGAAAAACCAATGGGAGAAA 59.099 43.478 3.55 0.00 38.05 2.52
357 358 3.142028 AGGGAGAAAAACCAATGGGAGAA 59.858 43.478 3.55 0.00 38.05 2.87
358 359 2.721906 AGGGAGAAAAACCAATGGGAGA 59.278 45.455 3.55 0.00 38.05 3.71
381 382 7.882271 CCTTAATGGGATTTGGTTTTTCAATGA 59.118 33.333 0.00 0.00 0.00 2.57
424 1573 8.477419 TTGAATCAACTCCTACCAAAAGAAAT 57.523 30.769 0.00 0.00 0.00 2.17
425 1574 7.889873 TTGAATCAACTCCTACCAAAAGAAA 57.110 32.000 0.00 0.00 0.00 2.52
429 1578 7.831691 TGAATTGAATCAACTCCTACCAAAA 57.168 32.000 1.83 0.00 0.00 2.44
506 1655 6.540438 TGTCTATCTTTTAGGACGGTGATT 57.460 37.500 0.00 0.00 0.00 2.57
726 4556 9.246670 TGGTAAGAGTTGATTCAATTCAATCAT 57.753 29.630 20.05 0.00 41.42 2.45
728 4558 9.912634 TTTGGTAAGAGTTGATTCAATTCAATC 57.087 29.630 20.05 10.89 37.88 2.67
745 4575 4.636648 TGTTTCGTGCTTTCTTTGGTAAGA 59.363 37.500 0.00 0.00 38.61 2.10
747 4577 4.966965 TGTTTCGTGCTTTCTTTGGTAA 57.033 36.364 0.00 0.00 0.00 2.85
749 4579 3.380004 TCATGTTTCGTGCTTTCTTTGGT 59.620 39.130 0.00 0.00 0.00 3.67
756 4586 3.686726 GGAGAGATCATGTTTCGTGCTTT 59.313 43.478 0.00 0.00 0.00 3.51
769 4599 6.829985 TCAAATCCCATTAAGGAGAGATCA 57.170 37.500 0.00 0.00 39.95 2.92
773 4603 8.752187 TGAAAAATCAAATCCCATTAAGGAGAG 58.248 33.333 0.00 0.00 39.95 3.20
774 4604 8.663209 TGAAAAATCAAATCCCATTAAGGAGA 57.337 30.769 0.00 0.00 39.95 3.71
792 4622 3.339742 ACTACCCCCTCCCATTGAAAAAT 59.660 43.478 0.00 0.00 0.00 1.82
798 4628 1.645402 CCCACTACCCCCTCCCATTG 61.645 65.000 0.00 0.00 0.00 2.82
801 4631 2.877383 TCCCACTACCCCCTCCCA 60.877 66.667 0.00 0.00 0.00 4.37
804 4634 1.689582 CACCTCCCACTACCCCCTC 60.690 68.421 0.00 0.00 0.00 4.30
809 4639 2.356780 CGTCCCACCTCCCACTACC 61.357 68.421 0.00 0.00 0.00 3.18
811 4641 0.613853 CTTCGTCCCACCTCCCACTA 60.614 60.000 0.00 0.00 0.00 2.74
816 5141 2.845363 TTTTACTTCGTCCCACCTCC 57.155 50.000 0.00 0.00 0.00 4.30
827 5152 8.632551 CGGTTTATTTTTGTCCGATTTTACTTC 58.367 33.333 0.00 0.00 43.22 3.01
830 5155 7.856492 ACGGTTTATTTTTGTCCGATTTTAC 57.144 32.000 8.84 0.00 43.22 2.01
836 5161 5.352016 CCTGATACGGTTTATTTTTGTCCGA 59.648 40.000 8.84 0.00 43.22 4.55
842 5167 6.181908 TGGTAGCCTGATACGGTTTATTTTT 58.818 36.000 0.00 0.00 0.00 1.94
847 5172 3.770933 AGTTGGTAGCCTGATACGGTTTA 59.229 43.478 0.00 0.00 0.00 2.01
849 5174 2.093658 CAGTTGGTAGCCTGATACGGTT 60.094 50.000 0.00 0.00 0.00 4.44
856 5658 4.009675 CAATTAAGCAGTTGGTAGCCTGA 58.990 43.478 2.79 0.00 0.00 3.86
868 5670 7.918033 TCGAAATCTCTACTCTCAATTAAGCAG 59.082 37.037 0.00 0.00 0.00 4.24
870 5672 8.810652 ATCGAAATCTCTACTCTCAATTAAGC 57.189 34.615 0.00 0.00 0.00 3.09
873 5675 8.361139 GGGAATCGAAATCTCTACTCTCAATTA 58.639 37.037 0.00 0.00 0.00 1.40
874 5676 7.213678 GGGAATCGAAATCTCTACTCTCAATT 58.786 38.462 0.00 0.00 0.00 2.32
879 5681 4.547671 TGGGGAATCGAAATCTCTACTCT 58.452 43.478 0.00 0.00 0.00 3.24
891 5693 5.022787 AGGAAAAATCAAATGGGGAATCGA 58.977 37.500 0.00 0.00 0.00 3.59
892 5694 5.343307 AGGAAAAATCAAATGGGGAATCG 57.657 39.130 0.00 0.00 0.00 3.34
893 5695 5.355071 GCAAGGAAAAATCAAATGGGGAATC 59.645 40.000 0.00 0.00 0.00 2.52
894 5696 5.222089 TGCAAGGAAAAATCAAATGGGGAAT 60.222 36.000 0.00 0.00 0.00 3.01
895 5697 4.103785 TGCAAGGAAAAATCAAATGGGGAA 59.896 37.500 0.00 0.00 0.00 3.97
896 5698 3.649981 TGCAAGGAAAAATCAAATGGGGA 59.350 39.130 0.00 0.00 0.00 4.81
897 5699 3.752747 GTGCAAGGAAAAATCAAATGGGG 59.247 43.478 0.00 0.00 0.00 4.96
898 5700 4.213906 GTGTGCAAGGAAAAATCAAATGGG 59.786 41.667 0.00 0.00 0.00 4.00
899 5701 4.084433 CGTGTGCAAGGAAAAATCAAATGG 60.084 41.667 0.00 0.00 0.00 3.16
900 5702 4.507388 ACGTGTGCAAGGAAAAATCAAATG 59.493 37.500 0.00 0.00 0.00 2.32
913 5715 1.333308 TGAATTGACCACGTGTGCAAG 59.667 47.619 20.20 6.80 0.00 4.01
918 5720 1.873591 GCTTCTGAATTGACCACGTGT 59.126 47.619 15.65 2.26 0.00 4.49
932 5734 1.530293 GCAAGTGAGTGTCAGCTTCTG 59.470 52.381 0.00 0.00 0.00 3.02
933 5735 1.415659 AGCAAGTGAGTGTCAGCTTCT 59.584 47.619 0.00 0.00 0.00 2.85
968 5778 5.970140 CTTGCTGCAGCTAGCTATATATG 57.030 43.478 36.61 13.34 45.94 1.78
993 6189 0.320421 ATGGCACGAGTGTGGTGTAC 60.320 55.000 5.07 0.00 46.51 2.90
994 6190 0.037697 GATGGCACGAGTGTGGTGTA 60.038 55.000 5.07 0.00 46.51 2.90
995 6191 1.301716 GATGGCACGAGTGTGGTGT 60.302 57.895 5.07 0.00 46.51 4.16
998 6198 1.645034 CTAAGATGGCACGAGTGTGG 58.355 55.000 5.07 0.00 46.51 4.17
1008 6208 0.684153 TTGCCCCAAGCTAAGATGGC 60.684 55.000 10.64 10.64 44.23 4.40
1009 6209 1.106285 GTTGCCCCAAGCTAAGATGG 58.894 55.000 0.00 0.00 44.23 3.51
1012 6212 0.036388 CTCGTTGCCCCAAGCTAAGA 60.036 55.000 0.00 0.00 44.23 2.10
1015 6215 0.178068 GATCTCGTTGCCCCAAGCTA 59.822 55.000 0.00 0.00 44.23 3.32
1016 6216 1.078143 GATCTCGTTGCCCCAAGCT 60.078 57.895 0.00 0.00 44.23 3.74
1017 6217 0.960364 TTGATCTCGTTGCCCCAAGC 60.960 55.000 0.00 0.00 44.14 4.01
1018 6218 1.470098 CTTTGATCTCGTTGCCCCAAG 59.530 52.381 0.00 0.00 0.00 3.61
1019 6219 1.202879 ACTTTGATCTCGTTGCCCCAA 60.203 47.619 0.00 0.00 0.00 4.12
1020 6220 0.400213 ACTTTGATCTCGTTGCCCCA 59.600 50.000 0.00 0.00 0.00 4.96
1021 6221 0.804989 CACTTTGATCTCGTTGCCCC 59.195 55.000 0.00 0.00 0.00 5.80
1022 6222 0.804989 CCACTTTGATCTCGTTGCCC 59.195 55.000 0.00 0.00 0.00 5.36
1024 6224 2.029728 CGATCCACTTTGATCTCGTTGC 59.970 50.000 0.00 0.00 39.20 4.17
1025 6225 3.511699 TCGATCCACTTTGATCTCGTTG 58.488 45.455 0.00 0.00 39.20 4.10
1027 6227 4.580995 ACTATCGATCCACTTTGATCTCGT 59.419 41.667 0.00 0.00 39.20 4.18
1028 6228 5.114785 ACTATCGATCCACTTTGATCTCG 57.885 43.478 0.00 0.00 39.20 4.04
1029 6229 5.010112 TGGACTATCGATCCACTTTGATCTC 59.990 44.000 0.00 0.00 41.47 2.75
1030 6230 4.895889 TGGACTATCGATCCACTTTGATCT 59.104 41.667 0.00 0.00 41.47 2.75
1031 6231 5.201713 TGGACTATCGATCCACTTTGATC 57.798 43.478 0.00 0.00 41.47 2.92
1032 6232 4.651503 ACTGGACTATCGATCCACTTTGAT 59.348 41.667 0.00 0.00 41.47 2.57
1033 6233 4.023980 ACTGGACTATCGATCCACTTTGA 58.976 43.478 0.00 0.00 41.47 2.69
1034 6234 4.363999 GACTGGACTATCGATCCACTTTG 58.636 47.826 0.00 0.00 41.47 2.77
1035 6235 3.066900 CGACTGGACTATCGATCCACTTT 59.933 47.826 0.00 0.00 41.47 2.66
1036 6236 2.619177 CGACTGGACTATCGATCCACTT 59.381 50.000 0.00 0.00 41.47 3.16
1037 6237 2.158798 TCGACTGGACTATCGATCCACT 60.159 50.000 0.00 0.00 42.18 4.00
1038 6238 2.219458 TCGACTGGACTATCGATCCAC 58.781 52.381 0.00 0.00 42.18 4.02
1039 6239 2.495084 CTCGACTGGACTATCGATCCA 58.505 52.381 0.00 3.16 45.63 3.41
1040 6240 1.198178 GCTCGACTGGACTATCGATCC 59.802 57.143 0.00 0.00 45.63 3.36
1041 6241 2.147958 AGCTCGACTGGACTATCGATC 58.852 52.381 0.00 0.00 45.63 3.69
1924 7198 4.394712 GTGGCGGCTGCAGGTAGT 62.395 66.667 21.31 0.00 45.35 2.73
2828 8210 0.456221 CGTTGTCGCTGGAGGTATCT 59.544 55.000 0.00 0.00 0.00 1.98
2879 8282 3.325870 TGTCTTTGGTTAGTGATCAGCG 58.674 45.455 0.00 0.00 0.00 5.18
2911 8314 2.238521 ACACAATTTCGGTTCCATGCT 58.761 42.857 0.00 0.00 0.00 3.79
2913 8316 5.621197 TTCTACACAATTTCGGTTCCATG 57.379 39.130 0.00 0.00 0.00 3.66
2915 8318 7.931578 ATATTTCTACACAATTTCGGTTCCA 57.068 32.000 0.00 0.00 0.00 3.53
2919 8322 9.199982 CCGTATATATTTCTACACAATTTCGGT 57.800 33.333 0.00 0.00 0.00 4.69
2920 8323 9.414295 TCCGTATATATTTCTACACAATTTCGG 57.586 33.333 0.00 0.00 0.00 4.30
2927 8330 7.979537 GCATCCATCCGTATATATTTCTACACA 59.020 37.037 0.00 0.00 0.00 3.72
2928 8331 7.167635 CGCATCCATCCGTATATATTTCTACAC 59.832 40.741 0.00 0.00 0.00 2.90
2930 8333 7.423199 TCGCATCCATCCGTATATATTTCTAC 58.577 38.462 0.00 0.00 0.00 2.59
2938 8341 3.055819 AGCTTTCGCATCCATCCGTATAT 60.056 43.478 0.00 0.00 39.10 0.86
2939 8342 2.299013 AGCTTTCGCATCCATCCGTATA 59.701 45.455 0.00 0.00 39.10 1.47
3000 8439 6.893759 TCCATTTTGTAGTACACAACAATCG 58.106 36.000 1.43 7.06 46.80 3.34
3006 8445 9.562408 TTCAGTTATCCATTTTGTAGTACACAA 57.438 29.630 1.43 3.12 45.49 3.33
3021 8460 7.452880 CTGAACCAAGAATTTCAGTTATCCA 57.547 36.000 0.00 0.00 42.54 3.41
3069 9330 3.657634 TCACACAAGACTTGCTGATCTC 58.342 45.455 15.24 0.00 0.00 2.75
3127 9429 5.538118 TCACATGACGACTCAACAAACTAT 58.462 37.500 0.00 0.00 0.00 2.12
3139 9441 3.060272 CACTGTTTCACTCACATGACGAC 60.060 47.826 0.00 0.00 0.00 4.34
3164 10255 7.507304 ACGATTTTGATAGTTCACAGTAAACG 58.493 34.615 0.00 0.00 0.00 3.60
3174 10265 5.500290 CGGTGTGCTACGATTTTGATAGTTC 60.500 44.000 0.00 0.00 0.00 3.01
3198 10289 0.459489 TGTTGCAAAGGCTTGGTGAC 59.541 50.000 0.00 1.47 41.91 3.67
3223 10314 0.654683 CTCTAAGCGCAACATGAGGC 59.345 55.000 11.47 0.92 0.00 4.70
3224 10315 2.015736 ACTCTAAGCGCAACATGAGG 57.984 50.000 11.47 0.00 0.00 3.86
3225 10316 4.153986 CAAAACTCTAAGCGCAACATGAG 58.846 43.478 11.47 11.88 0.00 2.90
3226 10317 3.609175 GCAAAACTCTAAGCGCAACATGA 60.609 43.478 11.47 0.00 0.00 3.07
3228 10319 2.293122 TGCAAAACTCTAAGCGCAACAT 59.707 40.909 11.47 0.00 0.00 2.71
3238 10329 3.754965 AGGCTCATGTTGCAAAACTCTA 58.245 40.909 0.00 0.00 0.00 2.43
3241 10332 4.322198 CCATAAGGCTCATGTTGCAAAACT 60.322 41.667 0.00 0.00 0.00 2.66
3243 10334 4.191033 CCATAAGGCTCATGTTGCAAAA 57.809 40.909 0.00 0.00 0.00 2.44
3261 10352 2.028561 AAACTGTTTGGGGATGCCAT 57.971 45.000 5.30 0.00 0.00 4.40
3263 10354 2.103941 TGAAAAACTGTTTGGGGATGCC 59.896 45.455 6.53 0.00 0.00 4.40
3297 10388 2.814919 TGAATTATTTTGCGGACCGTGT 59.185 40.909 16.73 0.00 0.00 4.49
3301 10392 6.452244 GCAATATGAATTATTTTGCGGACC 57.548 37.500 0.00 0.00 41.55 4.46
3306 10397 7.528182 GCATGAACGCAATATGAATTATTTTGC 59.472 33.333 0.00 3.75 44.93 3.68
3307 10398 7.732583 CGCATGAACGCAATATGAATTATTTTG 59.267 33.333 0.00 0.00 32.77 2.44
3308 10399 7.434897 ACGCATGAACGCAATATGAATTATTTT 59.565 29.630 0.00 0.00 36.19 1.82
3311 10402 6.000891 ACGCATGAACGCAATATGAATTAT 57.999 33.333 0.00 0.00 36.19 1.28
3312 10403 5.236263 AGACGCATGAACGCAATATGAATTA 59.764 36.000 0.00 0.00 36.19 1.40
3313 10404 4.035558 AGACGCATGAACGCAATATGAATT 59.964 37.500 0.00 0.00 36.19 2.17
3315 10406 2.935849 AGACGCATGAACGCAATATGAA 59.064 40.909 0.00 0.00 36.19 2.57
3317 10408 3.031126 CAAGACGCATGAACGCAATATG 58.969 45.455 0.00 0.00 36.19 1.78
3318 10409 2.539547 GCAAGACGCATGAACGCAATAT 60.540 45.455 0.00 0.00 41.79 1.28
3319 10410 1.202020 GCAAGACGCATGAACGCAATA 60.202 47.619 0.00 0.00 41.79 1.90
3320 10411 0.454957 GCAAGACGCATGAACGCAAT 60.455 50.000 0.00 0.00 41.79 3.56
3362 10454 0.177836 TCGTCCACAGGCCATATGTG 59.822 55.000 15.05 15.05 46.11 3.21
3363 10455 0.178068 GTCGTCCACAGGCCATATGT 59.822 55.000 5.01 0.00 0.00 2.29
3366 10468 2.889617 CGTCGTCCACAGGCCATA 59.110 61.111 5.01 0.00 0.00 2.74
3391 10493 0.605319 GGGTGAGTGGATGCGAAACA 60.605 55.000 0.00 0.00 0.00 2.83
3392 10494 0.605319 TGGGTGAGTGGATGCGAAAC 60.605 55.000 0.00 0.00 0.00 2.78
3402 10504 7.171337 CAGAAAATGGTTTAAAATGGGTGAGTG 59.829 37.037 0.00 0.00 0.00 3.51
3403 10505 7.216494 CAGAAAATGGTTTAAAATGGGTGAGT 58.784 34.615 0.00 0.00 0.00 3.41
3404 10506 6.147656 GCAGAAAATGGTTTAAAATGGGTGAG 59.852 38.462 0.00 0.00 0.00 3.51
3405 10507 5.994668 GCAGAAAATGGTTTAAAATGGGTGA 59.005 36.000 0.00 0.00 0.00 4.02
3406 10508 5.107143 CGCAGAAAATGGTTTAAAATGGGTG 60.107 40.000 0.00 0.00 0.00 4.61
3408 10510 4.391523 CCGCAGAAAATGGTTTAAAATGGG 59.608 41.667 0.00 0.00 0.00 4.00
3410 10512 6.644592 TCTTCCGCAGAAAATGGTTTAAAATG 59.355 34.615 0.00 0.00 0.00 2.32
3411 10513 6.754193 TCTTCCGCAGAAAATGGTTTAAAAT 58.246 32.000 0.00 0.00 0.00 1.82
3412 10514 6.150396 TCTTCCGCAGAAAATGGTTTAAAA 57.850 33.333 0.00 0.00 0.00 1.52
3413 10515 5.776173 TCTTCCGCAGAAAATGGTTTAAA 57.224 34.783 0.00 0.00 0.00 1.52
3414 10516 5.067936 TGTTCTTCCGCAGAAAATGGTTTAA 59.932 36.000 0.00 0.00 43.52 1.52
3415 10517 4.580995 TGTTCTTCCGCAGAAAATGGTTTA 59.419 37.500 0.00 0.00 43.52 2.01
3416 10518 3.383185 TGTTCTTCCGCAGAAAATGGTTT 59.617 39.130 0.00 0.00 43.52 3.27
3417 10519 2.955660 TGTTCTTCCGCAGAAAATGGTT 59.044 40.909 0.00 0.00 43.52 3.67
3418 10520 2.582052 TGTTCTTCCGCAGAAAATGGT 58.418 42.857 0.00 0.00 43.52 3.55
3419 10521 3.641437 TTGTTCTTCCGCAGAAAATGG 57.359 42.857 0.00 0.00 43.52 3.16
3430 10585 9.428097 AGAAAATGCTGAATAATTTGTTCTTCC 57.572 29.630 7.31 0.00 0.00 3.46
3478 10654 9.403110 GTGACGTTACAAGACTTTTCTCTTATA 57.597 33.333 5.47 0.00 0.00 0.98
3479 10655 7.384387 GGTGACGTTACAAGACTTTTCTCTTAT 59.616 37.037 12.91 0.00 0.00 1.73
3495 10671 6.978457 ACAAGATTTTGGTCGGTGACGTTAC 61.978 44.000 1.05 1.05 46.14 2.50
3496 10672 4.978840 ACAAGATTTTGGTCGGTGACGTTA 60.979 41.667 0.57 0.00 46.14 3.18
3497 10673 4.238886 ACAAGATTTTGGTCGGTGACGTT 61.239 43.478 0.57 0.00 46.14 3.99
3498 10674 2.743838 ACAAGATTTTGGTCGGTGACGT 60.744 45.455 0.57 0.00 46.14 4.34
3499 10675 1.871039 ACAAGATTTTGGTCGGTGACG 59.129 47.619 0.57 0.00 46.86 4.35
3500 10676 2.096417 CGACAAGATTTTGGTCGGTGAC 60.096 50.000 5.58 0.00 38.66 3.67
3501 10677 2.139917 CGACAAGATTTTGGTCGGTGA 58.860 47.619 5.58 0.00 38.66 4.02
3502 10678 1.399727 GCGACAAGATTTTGGTCGGTG 60.400 52.381 14.18 0.00 37.82 4.94
3503 10679 0.872388 GCGACAAGATTTTGGTCGGT 59.128 50.000 14.18 0.00 37.82 4.69
3504 10680 0.871722 TGCGACAAGATTTTGGTCGG 59.128 50.000 14.18 0.00 37.82 4.79
3505 10681 2.679355 TTGCGACAAGATTTTGGTCG 57.321 45.000 8.86 8.86 39.06 4.79
3506 10682 3.049912 GGTTTGCGACAAGATTTTGGTC 58.950 45.455 0.57 0.00 38.66 4.02
3527 10714 6.903325 CATCGAGTAAGATGTAACTGATCG 57.097 41.667 0.00 0.00 42.15 3.69
3574 10761 3.372514 TGCGCGTTAATATGAACACACAT 59.627 39.130 8.43 0.00 0.00 3.21
3577 10764 3.061563 GTCTGCGCGTTAATATGAACACA 59.938 43.478 8.43 0.00 0.00 3.72
3597 10786 0.250081 GATGCCGGATCTTGGAGGTC 60.250 60.000 5.05 0.41 0.00 3.85
3612 10801 6.234177 AGGGAGTAGTTAGCAATATTGATGC 58.766 40.000 19.73 10.30 44.15 3.91
3613 10802 6.876257 GGAGGGAGTAGTTAGCAATATTGATG 59.124 42.308 19.73 0.00 0.00 3.07
3626 10817 0.115745 TTGGGACGGAGGGAGTAGTT 59.884 55.000 0.00 0.00 0.00 2.24
3627 10818 0.115745 TTTGGGACGGAGGGAGTAGT 59.884 55.000 0.00 0.00 0.00 2.73
3628 10819 1.272807 TTTTGGGACGGAGGGAGTAG 58.727 55.000 0.00 0.00 0.00 2.57
3629 10820 1.961133 ATTTTGGGACGGAGGGAGTA 58.039 50.000 0.00 0.00 0.00 2.59
3630 10821 1.961133 TATTTTGGGACGGAGGGAGT 58.039 50.000 0.00 0.00 0.00 3.85
3631 10822 4.347000 TCTTATATTTTGGGACGGAGGGAG 59.653 45.833 0.00 0.00 0.00 4.30
3632 10823 4.300345 TCTTATATTTTGGGACGGAGGGA 58.700 43.478 0.00 0.00 0.00 4.20
3633 10824 4.699925 TCTTATATTTTGGGACGGAGGG 57.300 45.455 0.00 0.00 0.00 4.30
3634 10825 4.510340 CGTTCTTATATTTTGGGACGGAGG 59.490 45.833 0.00 0.00 0.00 4.30
3635 10826 5.114081 ACGTTCTTATATTTTGGGACGGAG 58.886 41.667 0.00 0.00 0.00 4.63
3636 10827 5.088680 ACGTTCTTATATTTTGGGACGGA 57.911 39.130 0.00 0.00 0.00 4.69
3637 10828 5.806366 AACGTTCTTATATTTTGGGACGG 57.194 39.130 0.00 0.00 0.00 4.79
3659 10850 3.332485 ACTCCCCCAGTATAGTGCAAAAA 59.668 43.478 1.67 0.00 31.37 1.94
3660 10851 2.916934 ACTCCCCCAGTATAGTGCAAAA 59.083 45.455 1.67 0.00 31.37 2.44
3661 10852 2.557869 ACTCCCCCAGTATAGTGCAAA 58.442 47.619 1.67 0.00 31.37 3.68
3662 10853 2.263895 ACTCCCCCAGTATAGTGCAA 57.736 50.000 1.67 0.00 31.37 4.08
3663 10854 2.246588 ACTACTCCCCCAGTATAGTGCA 59.753 50.000 1.67 0.00 36.96 4.57
3664 10855 2.960163 ACTACTCCCCCAGTATAGTGC 58.040 52.381 1.67 0.00 36.96 4.40
3665 10856 5.057843 TGTACTACTCCCCCAGTATAGTG 57.942 47.826 0.09 0.09 36.96 2.74
3666 10857 5.944809 ATGTACTACTCCCCCAGTATAGT 57.055 43.478 0.00 0.00 36.96 2.12
3667 10858 9.406113 GTAATATGTACTACTCCCCCAGTATAG 57.594 40.741 0.00 0.00 36.96 1.31
3668 10859 9.132185 AGTAATATGTACTACTCCCCCAGTATA 57.868 37.037 0.00 0.00 36.96 1.47
3669 10860 8.009242 AGTAATATGTACTACTCCCCCAGTAT 57.991 38.462 0.00 0.00 36.96 2.12
3670 10861 7.412203 AGTAATATGTACTACTCCCCCAGTA 57.588 40.000 0.00 0.00 36.43 2.74
3671 10862 6.290870 AGTAATATGTACTACTCCCCCAGT 57.709 41.667 0.00 0.00 39.41 4.00
3672 10863 6.781014 TCAAGTAATATGTACTACTCCCCCAG 59.219 42.308 0.00 0.00 0.00 4.45
3673 10864 6.685541 TCAAGTAATATGTACTACTCCCCCA 58.314 40.000 0.00 0.00 0.00 4.96
3674 10865 6.295180 GCTCAAGTAATATGTACTACTCCCCC 60.295 46.154 0.00 0.00 0.00 5.40
3675 10866 6.494146 AGCTCAAGTAATATGTACTACTCCCC 59.506 42.308 0.00 0.00 0.00 4.81
3676 10867 7.230913 TCAGCTCAAGTAATATGTACTACTCCC 59.769 40.741 0.00 0.00 0.00 4.30
3677 10868 8.167605 TCAGCTCAAGTAATATGTACTACTCC 57.832 38.462 0.00 0.00 0.00 3.85
3704 10895 8.861086 TCTCTAACAAGTGTCTAGAAATGTCTT 58.139 33.333 0.00 0.00 35.12 3.01
3715 10906 5.477291 TCTTCGGAATCTCTAACAAGTGTCT 59.523 40.000 0.00 0.00 0.00 3.41
3729 10920 4.097286 AGCTCTCACTACTTCTTCGGAATC 59.903 45.833 0.00 0.00 33.06 2.52
3730 10921 4.020543 AGCTCTCACTACTTCTTCGGAAT 58.979 43.478 0.00 0.00 33.06 3.01
3736 10927 5.708877 AACGTTAGCTCTCACTACTTCTT 57.291 39.130 0.00 0.00 0.00 2.52
3754 10945 4.461781 AGCCGTATATATGCCTAGAAACGT 59.538 41.667 0.00 0.00 0.00 3.99
3756 10947 7.668525 AAAAGCCGTATATATGCCTAGAAAC 57.331 36.000 0.00 0.00 0.00 2.78
3762 10953 9.899661 TGAAATATAAAAGCCGTATATATGCCT 57.100 29.630 0.00 0.00 0.00 4.75
3770 10961 9.048446 ACGTAACATGAAATATAAAAGCCGTAT 57.952 29.630 0.00 0.00 0.00 3.06
3771 10962 8.422973 ACGTAACATGAAATATAAAAGCCGTA 57.577 30.769 0.00 0.00 0.00 4.02
3773 10964 9.872757 ATTACGTAACATGAAATATAAAAGCCG 57.127 29.630 10.81 0.00 0.00 5.52
3782 10973 9.529325 CTTCAGAGGATTACGTAACATGAAATA 57.471 33.333 10.81 0.00 0.00 1.40
3803 10994 3.454082 AGCCAAGAGATAAGGTCCTTCAG 59.546 47.826 7.61 0.00 0.00 3.02
3817 11009 4.527509 TCAGTAACTCAAGAGCCAAGAG 57.472 45.455 0.00 0.00 35.56 2.85
3823 11017 7.640852 TCGAGTATATTCAGTAACTCAAGAGC 58.359 38.462 0.00 0.00 38.60 4.09
3847 11041 2.468831 CTATCAAGTTGCTCTCGGCTC 58.531 52.381 0.00 0.00 42.39 4.70
3848 11042 1.137872 CCTATCAAGTTGCTCTCGGCT 59.862 52.381 0.00 0.00 42.39 5.52
3859 11053 3.136626 GGTGCACTTATCCCCTATCAAGT 59.863 47.826 17.98 0.00 0.00 3.16
3876 11070 2.335011 CGACGAGACAGTGGTGCA 59.665 61.111 0.00 0.00 0.00 4.57
3883 11077 1.083489 AGAAGAGAGCGACGAGACAG 58.917 55.000 0.00 0.00 0.00 3.51
3884 11078 1.197949 CAAGAAGAGAGCGACGAGACA 59.802 52.381 0.00 0.00 0.00 3.41
3895 11089 2.951642 CCCACAAAGCAACAAGAAGAGA 59.048 45.455 0.00 0.00 0.00 3.10


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.