Multiple sequence alignment - TraesCS4B01G026100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G026100 chr4B 100.000 4533 0 0 1 4533 19734496 19739028 0.000000e+00 8371.0
1 TraesCS4B01G026100 chr4B 83.956 1365 197 16 2164 3517 518098133 518099486 0.000000e+00 1288.0
2 TraesCS4B01G026100 chr4B 78.786 1334 244 29 2164 3479 69378927 69380239 0.000000e+00 859.0
3 TraesCS4B01G026100 chr4B 85.421 535 78 0 1606 2140 518097476 518098010 1.420000e-154 556.0
4 TraesCS4B01G026100 chr4B 83.406 458 72 2 1599 2053 69378042 69378498 5.420000e-114 422.0
5 TraesCS4B01G026100 chr4B 83.284 341 45 9 1070 1401 518095347 518095684 2.050000e-78 303.0
6 TraesCS4B01G026100 chr4B 83.451 284 37 8 1121 1399 69375934 69376212 5.820000e-64 255.0
7 TraesCS4B01G026100 chr4B 85.227 88 10 3 4406 4493 531758381 531758465 2.250000e-13 87.9
8 TraesCS4B01G026100 chr4B 79.439 107 8 6 521 617 19730039 19730141 3.790000e-06 63.9
9 TraesCS4B01G026100 chr4B 94.872 39 2 0 1559 1597 612210224 612210262 1.360000e-05 62.1
10 TraesCS4B01G026100 chr4D 94.741 2814 110 19 1600 4391 10250294 10253091 0.000000e+00 4342.0
11 TraesCS4B01G026100 chr4D 84.126 1367 191 20 2164 3517 420942842 420944195 0.000000e+00 1299.0
12 TraesCS4B01G026100 chr4D 89.014 801 58 24 621 1402 10249056 10249845 0.000000e+00 965.0
13 TraesCS4B01G026100 chr4D 79.464 1344 241 27 2164 3491 47535720 47534396 0.000000e+00 920.0
14 TraesCS4B01G026100 chr4D 84.014 563 89 1 1600 2161 420942181 420942743 1.430000e-149 540.0
15 TraesCS4B01G026100 chr4D 83.983 462 69 3 1595 2053 47536528 47536069 5.380000e-119 438.0
16 TraesCS4B01G026100 chr4D 86.170 282 37 2 1121 1401 420940097 420940377 2.050000e-78 303.0
17 TraesCS4B01G026100 chr4D 84.716 229 19 6 521 738 10248645 10248868 9.880000e-52 215.0
18 TraesCS4B01G026100 chr4D 82.902 193 12 10 83 259 10249077 10249264 2.180000e-33 154.0
19 TraesCS4B01G026100 chr4A 95.586 2356 81 12 1606 3952 593356828 593354487 0.000000e+00 3753.0
20 TraesCS4B01G026100 chr4A 84.218 1356 192 16 2173 3517 43233063 43231719 0.000000e+00 1299.0
21 TraesCS4B01G026100 chr4A 89.277 802 31 28 648 1401 593357899 593357105 0.000000e+00 953.0
22 TraesCS4B01G026100 chr4A 78.842 1347 251 28 2160 3491 550482520 550481193 0.000000e+00 878.0
23 TraesCS4B01G026100 chr4A 85.252 556 82 0 1606 2161 43233725 43233170 1.410000e-159 573.0
24 TraesCS4B01G026100 chr4A 84.375 448 67 2 1609 2053 550483256 550482809 1.940000e-118 436.0
25 TraesCS4B01G026100 chr4A 81.658 398 58 13 1013 1401 43235822 43235431 2.630000e-82 316.0
26 TraesCS4B01G026100 chr4A 87.912 91 9 2 4416 4506 641591133 641591045 6.200000e-19 106.0
27 TraesCS4B01G026100 chr4A 85.366 82 12 0 325 406 744415536 744415617 8.080000e-13 86.1
28 TraesCS4B01G026100 chr6D 78.085 543 96 22 2929 3461 389370151 389370680 5.660000e-84 322.0
29 TraesCS4B01G026100 chr6D 73.874 777 182 17 2160 2927 389369302 389370066 1.600000e-74 291.0
30 TraesCS4B01G026100 chr6D 78.704 324 55 11 1082 1401 389367204 389367517 2.140000e-48 204.0
31 TraesCS4B01G026100 chr6D 91.176 68 4 2 4416 4483 222533963 222534028 1.740000e-14 91.6
32 TraesCS4B01G026100 chr6B 73.161 775 191 14 2160 2927 582400060 582400824 3.480000e-66 263.0
33 TraesCS4B01G026100 chr6B 78.655 342 56 14 1062 1399 582397830 582398158 1.280000e-50 211.0
34 TraesCS4B01G026100 chr6B 94.872 39 2 0 1559 1597 192931462 192931424 1.360000e-05 62.1
35 TraesCS4B01G026100 chr6B 100.000 31 0 0 1567 1597 212971189 212971159 1.760000e-04 58.4
36 TraesCS4B01G026100 chr3B 87.437 199 17 4 2393 2584 104157461 104157658 5.900000e-54 222.0
37 TraesCS4B01G026100 chr6A 82.727 220 28 7 1082 1299 535896378 535896589 2.150000e-43 187.0
38 TraesCS4B01G026100 chr1D 86.735 98 10 2 4435 4530 320384637 320384541 6.200000e-19 106.0
39 TraesCS4B01G026100 chr2D 89.744 78 6 2 4416 4493 363310685 363310760 1.040000e-16 99.0
40 TraesCS4B01G026100 chr7B 86.364 88 9 3 4406 4493 319204311 319204395 4.830000e-15 93.5
41 TraesCS4B01G026100 chr7B 100.000 35 0 0 1560 1594 57265218 57265184 1.050000e-06 65.8
42 TraesCS4B01G026100 chr3D 87.500 80 6 4 4406 4485 409383908 409383833 6.250000e-14 89.8
43 TraesCS4B01G026100 chr3D 95.000 40 2 0 1559 1598 28519072 28519033 3.790000e-06 63.9
44 TraesCS4B01G026100 chr2A 85.227 88 10 3 4406 4493 285991325 285991409 2.250000e-13 87.9
45 TraesCS4B01G026100 chr1A 91.803 61 5 0 4433 4493 427318046 427318106 8.080000e-13 86.1
46 TraesCS4B01G026100 chr5B 93.182 44 3 0 1554 1597 561686851 561686894 1.050000e-06 65.8
47 TraesCS4B01G026100 chr7D 92.857 42 3 0 1559 1600 507241729 507241688 1.360000e-05 62.1
48 TraesCS4B01G026100 chr7D 100.000 31 0 0 1560 1590 100984921 100984891 1.760000e-04 58.4
49 TraesCS4B01G026100 chr7A 100.000 28 0 0 1560 1587 103107589 103107562 8.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G026100 chr4B 19734496 19739028 4532 False 8371.000000 8371 100.000000 1 4533 1 chr4B.!!$F2 4532
1 TraesCS4B01G026100 chr4B 518095347 518099486 4139 False 715.666667 1288 84.220333 1070 3517 3 chr4B.!!$F6 2447
2 TraesCS4B01G026100 chr4B 69375934 69380239 4305 False 512.000000 859 81.881000 1121 3479 3 chr4B.!!$F5 2358
3 TraesCS4B01G026100 chr4D 10248645 10253091 4446 False 1419.000000 4342 87.843250 83 4391 4 chr4D.!!$F1 4308
4 TraesCS4B01G026100 chr4D 420940097 420944195 4098 False 714.000000 1299 84.770000 1121 3517 3 chr4D.!!$F2 2396
5 TraesCS4B01G026100 chr4D 47534396 47536528 2132 True 679.000000 920 81.723500 1595 3491 2 chr4D.!!$R1 1896
6 TraesCS4B01G026100 chr4A 593354487 593357899 3412 True 2353.000000 3753 92.431500 648 3952 2 chr4A.!!$R4 3304
7 TraesCS4B01G026100 chr4A 43231719 43235822 4103 True 729.333333 1299 83.709333 1013 3517 3 chr4A.!!$R2 2504
8 TraesCS4B01G026100 chr4A 550481193 550483256 2063 True 657.000000 878 81.608500 1609 3491 2 chr4A.!!$R3 1882
9 TraesCS4B01G026100 chr6D 389367204 389370680 3476 False 272.333333 322 76.887667 1082 3461 3 chr6D.!!$F2 2379
10 TraesCS4B01G026100 chr6B 582397830 582400824 2994 False 237.000000 263 75.908000 1062 2927 2 chr6B.!!$F1 1865

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
177 178 0.249699 TTGCTGCATACGTATCCCCG 60.250 55.000 4.74 0.0 0.00 5.73 F
1263 1646 0.032403 CGTACAAGTGGTGGTCGGAA 59.968 55.000 0.00 0.0 0.00 4.30 F
1552 4686 1.266175 CGTGTATCGGGAGCGTCTATT 59.734 52.381 0.00 0.0 35.71 1.73 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1531 4665 0.179076 TAGACGCTCCCGATACACGA 60.179 55.0 0.0 0.0 45.77 4.35 R
2494 6771 0.809385 CGAAGTAGTTGCCGAGGAGA 59.191 55.0 0.0 0.0 0.00 3.71 R
3549 7927 0.320946 CCCCGCCGAAAACAGACTAA 60.321 55.0 0.0 0.0 0.00 2.24 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 3.713288 CGTCACTTGTCACAACCTAAGA 58.287 45.455 0.00 0.00 0.00 2.10
22 23 4.116961 CGTCACTTGTCACAACCTAAGAA 58.883 43.478 0.00 0.00 0.00 2.52
23 24 4.209288 CGTCACTTGTCACAACCTAAGAAG 59.791 45.833 0.00 0.00 0.00 2.85
24 25 5.357257 GTCACTTGTCACAACCTAAGAAGA 58.643 41.667 0.00 0.00 0.00 2.87
25 26 5.992217 GTCACTTGTCACAACCTAAGAAGAT 59.008 40.000 0.00 0.00 0.00 2.40
26 27 6.483640 GTCACTTGTCACAACCTAAGAAGATT 59.516 38.462 0.00 0.00 0.00 2.40
27 28 7.656137 GTCACTTGTCACAACCTAAGAAGATTA 59.344 37.037 0.00 0.00 0.00 1.75
28 29 7.872993 TCACTTGTCACAACCTAAGAAGATTAG 59.127 37.037 0.00 0.00 0.00 1.73
29 30 7.872993 CACTTGTCACAACCTAAGAAGATTAGA 59.127 37.037 0.00 0.00 0.00 2.10
30 31 8.091449 ACTTGTCACAACCTAAGAAGATTAGAG 58.909 37.037 0.00 0.00 0.00 2.43
31 32 7.540474 TGTCACAACCTAAGAAGATTAGAGT 57.460 36.000 0.00 0.00 0.00 3.24
32 33 7.378966 TGTCACAACCTAAGAAGATTAGAGTG 58.621 38.462 0.00 0.00 0.00 3.51
33 34 7.232737 TGTCACAACCTAAGAAGATTAGAGTGA 59.767 37.037 10.59 10.59 31.93 3.41
34 35 8.254508 GTCACAACCTAAGAAGATTAGAGTGAT 58.745 37.037 14.51 0.00 34.30 3.06
35 36 8.470805 TCACAACCTAAGAAGATTAGAGTGATC 58.529 37.037 10.59 0.00 30.75 2.92
36 37 8.474025 CACAACCTAAGAAGATTAGAGTGATCT 58.526 37.037 0.00 0.00 35.43 2.75
37 38 9.041354 ACAACCTAAGAAGATTAGAGTGATCTT 57.959 33.333 0.00 0.00 44.32 2.40
38 39 9.883142 CAACCTAAGAAGATTAGAGTGATCTTT 57.117 33.333 0.00 0.00 42.34 2.52
68 69 7.611213 AAGTACTCCTCAATTGGTAATTTCG 57.389 36.000 5.42 0.00 0.00 3.46
69 70 6.942976 AGTACTCCTCAATTGGTAATTTCGA 58.057 36.000 5.42 0.00 0.00 3.71
70 71 7.565680 AGTACTCCTCAATTGGTAATTTCGAT 58.434 34.615 5.42 0.00 0.00 3.59
71 72 6.927294 ACTCCTCAATTGGTAATTTCGATC 57.073 37.500 5.42 0.00 0.00 3.69
72 73 6.414732 ACTCCTCAATTGGTAATTTCGATCA 58.585 36.000 5.42 0.00 0.00 2.92
73 74 6.316390 ACTCCTCAATTGGTAATTTCGATCAC 59.684 38.462 5.42 0.00 0.00 3.06
74 75 5.588648 TCCTCAATTGGTAATTTCGATCACC 59.411 40.000 5.42 0.00 0.00 4.02
75 76 5.356751 CCTCAATTGGTAATTTCGATCACCA 59.643 40.000 5.42 4.39 39.27 4.17
81 82 5.406649 TGGTAATTTCGATCACCAATTTGC 58.593 37.500 5.70 0.00 38.10 3.68
82 83 5.047731 TGGTAATTTCGATCACCAATTTGCA 60.048 36.000 5.70 0.00 38.10 4.08
83 84 6.042143 GGTAATTTCGATCACCAATTTGCAT 58.958 36.000 0.00 0.00 0.00 3.96
84 85 7.148000 TGGTAATTTCGATCACCAATTTGCATA 60.148 33.333 5.70 0.00 38.10 3.14
85 86 7.867403 GGTAATTTCGATCACCAATTTGCATAT 59.133 33.333 0.00 0.00 0.00 1.78
86 87 9.891828 GTAATTTCGATCACCAATTTGCATATA 57.108 29.630 0.00 0.00 0.00 0.86
88 89 9.985730 AATTTCGATCACCAATTTGCATATATT 57.014 25.926 0.00 0.00 0.00 1.28
89 90 9.985730 ATTTCGATCACCAATTTGCATATATTT 57.014 25.926 0.00 0.00 0.00 1.40
90 91 8.800231 TTCGATCACCAATTTGCATATATTTG 57.200 30.769 0.00 0.00 0.00 2.32
91 92 7.369607 TCGATCACCAATTTGCATATATTTGG 58.630 34.615 10.37 10.37 42.02 3.28
92 93 6.587226 CGATCACCAATTTGCATATATTTGGG 59.413 38.462 14.71 6.65 40.89 4.12
93 94 7.523544 CGATCACCAATTTGCATATATTTGGGA 60.524 37.037 14.71 10.39 40.89 4.37
94 95 7.053316 TCACCAATTTGCATATATTTGGGAG 57.947 36.000 14.71 8.75 40.89 4.30
95 96 6.838090 TCACCAATTTGCATATATTTGGGAGA 59.162 34.615 14.71 10.35 40.89 3.71
96 97 7.344093 TCACCAATTTGCATATATTTGGGAGAA 59.656 33.333 14.71 0.00 40.89 2.87
97 98 8.152246 CACCAATTTGCATATATTTGGGAGAAT 58.848 33.333 14.71 0.00 40.89 2.40
98 99 8.716779 ACCAATTTGCATATATTTGGGAGAATT 58.283 29.630 14.71 0.00 40.89 2.17
99 100 9.563748 CCAATTTGCATATATTTGGGAGAATTT 57.436 29.630 5.52 0.00 34.51 1.82
114 115 8.821686 TGGGAGAATTTTAATGACATACATGT 57.178 30.769 2.69 2.69 45.16 3.21
115 116 9.913310 TGGGAGAATTTTAATGACATACATGTA 57.087 29.630 8.27 8.27 41.95 2.29
129 130 9.855021 TGACATACATGTATATAGTTGGATTCG 57.145 33.333 17.86 4.07 41.95 3.34
130 131 8.703604 ACATACATGTATATAGTTGGATTCGC 57.296 34.615 17.86 0.00 39.68 4.70
131 132 8.311109 ACATACATGTATATAGTTGGATTCGCA 58.689 33.333 17.86 0.00 39.68 5.10
132 133 9.317936 CATACATGTATATAGTTGGATTCGCAT 57.682 33.333 17.86 0.00 0.00 4.73
133 134 9.890629 ATACATGTATATAGTTGGATTCGCATT 57.109 29.630 16.85 0.00 0.00 3.56
135 136 9.719355 ACATGTATATAGTTGGATTCGCATTAA 57.281 29.630 0.00 0.00 0.00 1.40
138 139 9.639601 TGTATATAGTTGGATTCGCATTAAGAG 57.360 33.333 0.00 0.00 0.00 2.85
139 140 9.088512 GTATATAGTTGGATTCGCATTAAGAGG 57.911 37.037 0.00 0.00 0.00 3.69
140 141 4.487714 AGTTGGATTCGCATTAAGAGGA 57.512 40.909 0.00 0.00 0.00 3.71
141 142 4.843728 AGTTGGATTCGCATTAAGAGGAA 58.156 39.130 0.00 0.00 0.00 3.36
142 143 5.440610 AGTTGGATTCGCATTAAGAGGAAT 58.559 37.500 0.00 0.00 32.15 3.01
143 144 5.297776 AGTTGGATTCGCATTAAGAGGAATG 59.702 40.000 3.29 0.00 39.41 2.67
144 145 5.034852 TGGATTCGCATTAAGAGGAATGA 57.965 39.130 0.40 0.00 38.83 2.57
145 146 5.436175 TGGATTCGCATTAAGAGGAATGAA 58.564 37.500 0.40 0.00 38.83 2.57
146 147 5.885352 TGGATTCGCATTAAGAGGAATGAAA 59.115 36.000 0.40 0.00 38.83 2.69
147 148 6.547141 TGGATTCGCATTAAGAGGAATGAAAT 59.453 34.615 0.40 0.09 38.83 2.17
148 149 7.080724 GGATTCGCATTAAGAGGAATGAAATC 58.919 38.462 0.40 7.77 38.83 2.17
149 150 6.377327 TTCGCATTAAGAGGAATGAAATCC 57.623 37.500 0.40 0.00 38.83 3.01
162 163 7.631717 GGAATGAAATCCTACTACTTTTGCT 57.368 36.000 0.00 0.00 36.50 3.91
163 164 7.475840 GGAATGAAATCCTACTACTTTTGCTG 58.524 38.462 0.00 0.00 36.50 4.41
164 165 5.880054 TGAAATCCTACTACTTTTGCTGC 57.120 39.130 0.00 0.00 0.00 5.25
165 166 5.312895 TGAAATCCTACTACTTTTGCTGCA 58.687 37.500 0.00 0.00 0.00 4.41
166 167 5.945784 TGAAATCCTACTACTTTTGCTGCAT 59.054 36.000 1.84 0.00 0.00 3.96
167 168 7.109501 TGAAATCCTACTACTTTTGCTGCATA 58.890 34.615 1.84 0.00 0.00 3.14
168 169 6.927294 AATCCTACTACTTTTGCTGCATAC 57.073 37.500 1.84 0.00 0.00 2.39
169 170 4.430007 TCCTACTACTTTTGCTGCATACG 58.570 43.478 1.84 0.00 0.00 3.06
170 171 4.081862 TCCTACTACTTTTGCTGCATACGT 60.082 41.667 1.84 5.26 0.00 3.57
171 172 5.125900 TCCTACTACTTTTGCTGCATACGTA 59.874 40.000 1.84 6.22 0.00 3.57
172 173 5.983720 CCTACTACTTTTGCTGCATACGTAT 59.016 40.000 1.84 1.14 0.00 3.06
173 174 5.968387 ACTACTTTTGCTGCATACGTATC 57.032 39.130 4.74 1.78 0.00 2.24
174 175 4.809426 ACTACTTTTGCTGCATACGTATCC 59.191 41.667 4.74 0.00 0.00 2.59
175 176 2.943033 ACTTTTGCTGCATACGTATCCC 59.057 45.455 4.74 0.40 0.00 3.85
176 177 1.961793 TTTGCTGCATACGTATCCCC 58.038 50.000 4.74 0.00 0.00 4.81
177 178 0.249699 TTGCTGCATACGTATCCCCG 60.250 55.000 4.74 0.00 0.00 5.73
178 179 2.027625 GCTGCATACGTATCCCCGC 61.028 63.158 4.74 6.88 0.00 6.13
179 180 1.374252 CTGCATACGTATCCCCGCC 60.374 63.158 4.74 0.00 0.00 6.13
180 181 2.431942 GCATACGTATCCCCGCCG 60.432 66.667 4.74 0.00 0.00 6.46
181 182 3.045142 CATACGTATCCCCGCCGT 58.955 61.111 4.74 0.00 38.53 5.68
182 183 1.372499 CATACGTATCCCCGCCGTG 60.372 63.158 4.74 0.00 36.12 4.94
183 184 1.829533 ATACGTATCCCCGCCGTGT 60.830 57.895 1.14 0.00 36.12 4.49
184 185 0.537143 ATACGTATCCCCGCCGTGTA 60.537 55.000 1.14 0.00 36.12 2.90
185 186 1.165907 TACGTATCCCCGCCGTGTAG 61.166 60.000 0.00 0.00 36.12 2.74
186 187 2.732658 GTATCCCCGCCGTGTAGG 59.267 66.667 0.00 0.00 44.97 3.18
187 188 1.829533 GTATCCCCGCCGTGTAGGA 60.830 63.158 0.00 0.00 45.00 2.94
188 189 1.154454 TATCCCCGCCGTGTAGGAT 59.846 57.895 6.14 6.14 45.00 3.24
189 190 0.405198 TATCCCCGCCGTGTAGGATA 59.595 55.000 4.57 4.57 45.00 2.59
190 191 0.252103 ATCCCCGCCGTGTAGGATAT 60.252 55.000 0.00 0.00 45.00 1.63
191 192 0.405198 TCCCCGCCGTGTAGGATATA 59.595 55.000 0.00 0.00 45.00 0.86
192 193 1.006281 TCCCCGCCGTGTAGGATATAT 59.994 52.381 0.00 0.00 45.00 0.86
193 194 2.241941 TCCCCGCCGTGTAGGATATATA 59.758 50.000 0.00 0.00 45.00 0.86
194 195 2.360165 CCCCGCCGTGTAGGATATATAC 59.640 54.545 0.00 0.00 45.00 1.47
195 196 3.285484 CCCGCCGTGTAGGATATATACT 58.715 50.000 2.25 2.25 45.00 2.12
196 197 3.314635 CCCGCCGTGTAGGATATATACTC 59.685 52.174 0.00 0.00 45.00 2.59
197 198 3.943381 CCGCCGTGTAGGATATATACTCA 59.057 47.826 0.00 0.00 45.00 3.41
198 199 4.579340 CCGCCGTGTAGGATATATACTCAT 59.421 45.833 0.00 0.00 45.00 2.90
199 200 5.505819 CCGCCGTGTAGGATATATACTCATG 60.506 48.000 0.00 5.39 45.00 3.07
200 201 5.066117 CGCCGTGTAGGATATATACTCATGT 59.934 44.000 0.00 0.00 45.00 3.21
201 202 6.259387 CGCCGTGTAGGATATATACTCATGTA 59.741 42.308 0.00 0.00 45.00 2.29
202 203 7.041303 CGCCGTGTAGGATATATACTCATGTAT 60.041 40.741 0.00 0.00 45.00 2.29
203 204 9.281371 GCCGTGTAGGATATATACTCATGTATA 57.719 37.037 0.00 0.00 45.00 1.47
234 235 9.799106 AATAATCTCCAATTAATGTCCAGTAGG 57.201 33.333 0.00 0.00 0.00 3.18
235 236 7.451731 AATCTCCAATTAATGTCCAGTAGGA 57.548 36.000 0.00 0.00 43.21 2.94
247 248 4.002906 TCCAGTAGGAACACACACAATC 57.997 45.455 0.00 0.00 42.23 2.67
248 249 3.074412 CCAGTAGGAACACACACAATCC 58.926 50.000 0.00 0.00 36.89 3.01
249 250 3.244561 CCAGTAGGAACACACACAATCCT 60.245 47.826 0.00 0.00 44.34 3.24
250 251 4.020573 CCAGTAGGAACACACACAATCCTA 60.021 45.833 0.00 0.00 42.24 2.94
251 252 5.338381 CCAGTAGGAACACACACAATCCTAT 60.338 44.000 3.90 0.00 44.16 2.57
252 253 5.812642 CAGTAGGAACACACACAATCCTATC 59.187 44.000 3.90 0.00 44.16 2.08
253 254 4.908601 AGGAACACACACAATCCTATCA 57.091 40.909 0.00 0.00 40.47 2.15
254 255 5.441718 AGGAACACACACAATCCTATCAT 57.558 39.130 0.00 0.00 40.47 2.45
255 256 5.819991 AGGAACACACACAATCCTATCATT 58.180 37.500 0.00 0.00 40.47 2.57
256 257 6.248433 AGGAACACACACAATCCTATCATTT 58.752 36.000 0.00 0.00 40.47 2.32
257 258 6.721208 AGGAACACACACAATCCTATCATTTT 59.279 34.615 0.00 0.00 40.47 1.82
258 259 7.888021 AGGAACACACACAATCCTATCATTTTA 59.112 33.333 0.00 0.00 40.47 1.52
259 260 8.519526 GGAACACACACAATCCTATCATTTTAA 58.480 33.333 0.00 0.00 0.00 1.52
260 261 9.559958 GAACACACACAATCCTATCATTTTAAG 57.440 33.333 0.00 0.00 0.00 1.85
261 262 8.055279 ACACACACAATCCTATCATTTTAAGG 57.945 34.615 0.00 0.00 0.00 2.69
262 263 7.888021 ACACACACAATCCTATCATTTTAAGGA 59.112 33.333 0.00 0.00 43.38 3.36
263 264 8.739039 CACACACAATCCTATCATTTTAAGGAA 58.261 33.333 0.00 0.00 42.53 3.36
264 265 9.308000 ACACACAATCCTATCATTTTAAGGAAA 57.692 29.630 0.00 0.00 42.53 3.13
298 299 8.289939 CACTTCTTAGTGGTAGTTATCCTACA 57.710 38.462 0.00 0.00 46.52 2.74
299 300 8.915036 CACTTCTTAGTGGTAGTTATCCTACAT 58.085 37.037 0.00 0.00 46.52 2.29
300 301 8.915036 ACTTCTTAGTGGTAGTTATCCTACATG 58.085 37.037 0.00 0.00 46.68 3.21
301 302 8.834004 TTCTTAGTGGTAGTTATCCTACATGT 57.166 34.615 2.69 2.69 46.68 3.21
302 303 8.461249 TCTTAGTGGTAGTTATCCTACATGTC 57.539 38.462 0.00 0.00 46.68 3.06
303 304 8.280084 TCTTAGTGGTAGTTATCCTACATGTCT 58.720 37.037 0.00 0.00 46.68 3.41
304 305 8.834004 TTAGTGGTAGTTATCCTACATGTCTT 57.166 34.615 0.00 0.00 46.68 3.01
305 306 7.113658 AGTGGTAGTTATCCTACATGTCTTG 57.886 40.000 0.00 0.00 46.68 3.02
306 307 6.668283 AGTGGTAGTTATCCTACATGTCTTGT 59.332 38.462 0.00 0.00 46.68 3.16
307 308 7.837689 AGTGGTAGTTATCCTACATGTCTTGTA 59.162 37.037 0.00 0.00 46.68 2.41
308 309 8.639761 GTGGTAGTTATCCTACATGTCTTGTAT 58.360 37.037 0.00 0.00 46.68 2.29
309 310 9.871175 TGGTAGTTATCCTACATGTCTTGTATA 57.129 33.333 0.00 0.00 46.68 1.47
318 319 9.588096 TCCTACATGTCTTGTATACTATCATGT 57.412 33.333 24.92 24.92 43.88 3.21
319 320 9.631452 CCTACATGTCTTGTATACTATCATGTG 57.369 37.037 27.10 21.17 42.37 3.21
320 321 9.631452 CTACATGTCTTGTATACTATCATGTGG 57.369 37.037 27.10 23.96 42.37 4.17
321 322 8.023021 ACATGTCTTGTATACTATCATGTGGT 57.977 34.615 23.06 10.17 41.39 4.16
322 323 9.143155 ACATGTCTTGTATACTATCATGTGGTA 57.857 33.333 23.06 0.00 41.39 3.25
323 324 9.411801 CATGTCTTGTATACTATCATGTGGTAC 57.588 37.037 16.42 0.00 0.00 3.34
324 325 8.762481 TGTCTTGTATACTATCATGTGGTACT 57.238 34.615 4.17 0.00 0.00 2.73
325 326 9.856162 TGTCTTGTATACTATCATGTGGTACTA 57.144 33.333 4.17 0.00 0.00 1.82
393 394 8.853077 AAGATGATTCAAAGTGAGTTACATGA 57.147 30.769 0.00 0.00 0.00 3.07
394 395 8.853077 AGATGATTCAAAGTGAGTTACATGAA 57.147 30.769 0.00 8.17 39.83 2.57
395 396 9.288576 AGATGATTCAAAGTGAGTTACATGAAA 57.711 29.630 0.00 0.00 39.34 2.69
396 397 9.897744 GATGATTCAAAGTGAGTTACATGAAAA 57.102 29.630 0.00 0.00 39.34 2.29
402 403 8.816144 TCAAAGTGAGTTACATGAAAATTTTGC 58.184 29.630 8.47 1.07 0.00 3.68
403 404 8.602328 CAAAGTGAGTTACATGAAAATTTTGCA 58.398 29.630 8.47 6.82 0.00 4.08
404 405 8.715191 AAGTGAGTTACATGAAAATTTTGCAA 57.285 26.923 8.47 0.00 0.00 4.08
405 406 8.356533 AGTGAGTTACATGAAAATTTTGCAAG 57.643 30.769 8.47 6.18 0.00 4.01
406 407 8.196771 AGTGAGTTACATGAAAATTTTGCAAGA 58.803 29.630 8.47 0.00 0.00 3.02
407 408 8.981647 GTGAGTTACATGAAAATTTTGCAAGAT 58.018 29.630 8.47 0.00 0.00 2.40
422 423 9.982651 ATTTTGCAAGATAGATACTACATACGT 57.017 29.630 0.00 0.00 0.00 3.57
423 424 9.459640 TTTTGCAAGATAGATACTACATACGTC 57.540 33.333 0.00 0.00 0.00 4.34
424 425 7.739498 TGCAAGATAGATACTACATACGTCA 57.261 36.000 0.00 0.00 0.00 4.35
425 426 8.336801 TGCAAGATAGATACTACATACGTCAT 57.663 34.615 0.00 0.00 0.00 3.06
426 427 9.444600 TGCAAGATAGATACTACATACGTCATA 57.555 33.333 0.00 0.00 0.00 2.15
427 428 9.705471 GCAAGATAGATACTACATACGTCATAC 57.295 37.037 0.00 0.00 0.00 2.39
434 435 9.947669 AGATACTACATACGTCATACAAAACTC 57.052 33.333 0.00 0.00 0.00 3.01
435 436 9.726232 GATACTACATACGTCATACAAAACTCA 57.274 33.333 0.00 0.00 0.00 3.41
437 438 8.462143 ACTACATACGTCATACAAAACTCAAG 57.538 34.615 0.00 0.00 0.00 3.02
438 439 8.086522 ACTACATACGTCATACAAAACTCAAGT 58.913 33.333 0.00 0.00 0.00 3.16
439 440 7.117241 ACATACGTCATACAAAACTCAAGTG 57.883 36.000 0.00 0.00 0.00 3.16
440 441 6.147164 ACATACGTCATACAAAACTCAAGTGG 59.853 38.462 0.00 0.00 0.00 4.00
441 442 4.448210 ACGTCATACAAAACTCAAGTGGT 58.552 39.130 0.00 0.00 0.00 4.16
442 443 4.272504 ACGTCATACAAAACTCAAGTGGTG 59.727 41.667 0.00 0.00 0.00 4.17
443 444 4.509970 CGTCATACAAAACTCAAGTGGTGA 59.490 41.667 1.53 0.00 34.17 4.02
444 445 5.179368 CGTCATACAAAACTCAAGTGGTGAT 59.821 40.000 1.53 0.00 35.07 3.06
445 446 6.367695 CGTCATACAAAACTCAAGTGGTGATA 59.632 38.462 1.53 0.00 35.07 2.15
446 447 7.095397 CGTCATACAAAACTCAAGTGGTGATAA 60.095 37.037 1.53 0.00 35.07 1.75
447 448 8.015658 GTCATACAAAACTCAAGTGGTGATAAC 58.984 37.037 1.53 0.00 35.07 1.89
448 449 7.936847 TCATACAAAACTCAAGTGGTGATAACT 59.063 33.333 1.53 0.00 35.07 2.24
449 450 9.214957 CATACAAAACTCAAGTGGTGATAACTA 57.785 33.333 1.53 0.00 35.07 2.24
450 451 9.959721 ATACAAAACTCAAGTGGTGATAACTAT 57.040 29.630 1.53 0.00 35.07 2.12
451 452 8.324163 ACAAAACTCAAGTGGTGATAACTATC 57.676 34.615 1.53 0.00 35.07 2.08
452 453 7.936847 ACAAAACTCAAGTGGTGATAACTATCA 59.063 33.333 0.00 0.00 40.19 2.15
475 476 8.871629 TCACTGGTGGTATATAAAATTTGTGT 57.128 30.769 0.00 0.00 0.00 3.72
476 477 8.735315 TCACTGGTGGTATATAAAATTTGTGTG 58.265 33.333 0.00 0.00 0.00 3.82
477 478 8.519526 CACTGGTGGTATATAAAATTTGTGTGT 58.480 33.333 0.00 0.00 0.00 3.72
478 479 8.519526 ACTGGTGGTATATAAAATTTGTGTGTG 58.480 33.333 0.00 0.00 0.00 3.82
479 480 8.410673 TGGTGGTATATAAAATTTGTGTGTGT 57.589 30.769 0.00 0.00 0.00 3.72
480 481 8.516234 TGGTGGTATATAAAATTTGTGTGTGTC 58.484 33.333 0.00 0.00 0.00 3.67
481 482 8.736244 GGTGGTATATAAAATTTGTGTGTGTCT 58.264 33.333 0.00 0.00 0.00 3.41
482 483 9.769093 GTGGTATATAAAATTTGTGTGTGTCTC 57.231 33.333 0.00 0.00 0.00 3.36
483 484 9.733556 TGGTATATAAAATTTGTGTGTGTCTCT 57.266 29.630 0.00 0.00 0.00 3.10
552 559 7.067494 ACAAATCTAGATGGGTTGCAAATAGAC 59.933 37.037 5.86 0.00 0.00 2.59
556 563 3.763897 AGATGGGTTGCAAATAGACCAAC 59.236 43.478 0.00 4.30 38.42 3.77
563 570 5.394005 GGTTGCAAATAGACCAACATATGCA 60.394 40.000 0.00 0.00 40.32 3.96
575 582 7.015584 AGACCAACATATGCACATAGATCTACA 59.984 37.037 4.10 0.00 0.00 2.74
584 595 6.883744 TGCACATAGATCTACAATGTGGTAA 58.116 36.000 26.99 8.41 46.75 2.85
586 597 7.279981 TGCACATAGATCTACAATGTGGTAAAC 59.720 37.037 26.99 16.21 46.75 2.01
590 601 4.630069 AGATCTACAATGTGGTAAACGTGC 59.370 41.667 0.00 0.00 0.00 5.34
595 606 2.667199 GTGGTAAACGTGCGGCCT 60.667 61.111 0.00 0.00 0.00 5.19
596 607 1.374505 GTGGTAAACGTGCGGCCTA 60.375 57.895 0.00 0.00 0.00 3.93
597 608 1.079681 TGGTAAACGTGCGGCCTAG 60.080 57.895 0.00 0.00 0.00 3.02
598 609 1.079612 GGTAAACGTGCGGCCTAGT 60.080 57.895 0.00 0.00 0.00 2.57
599 610 0.671472 GGTAAACGTGCGGCCTAGTT 60.671 55.000 0.00 0.00 0.00 2.24
629 640 1.269012 CACATTTGGGCCCAGTTCAT 58.731 50.000 26.87 13.10 0.00 2.57
631 642 3.033184 CACATTTGGGCCCAGTTCATAT 58.967 45.455 26.87 9.91 0.00 1.78
632 643 4.214310 CACATTTGGGCCCAGTTCATATA 58.786 43.478 26.87 4.06 0.00 0.86
634 645 4.214310 CATTTGGGCCCAGTTCATATACA 58.786 43.478 26.87 2.24 0.00 2.29
667 678 7.429636 AAAATGGCAGAATATTAATGCATGC 57.570 32.000 20.73 11.82 41.78 4.06
668 679 5.731957 ATGGCAGAATATTAATGCATGCA 57.268 34.783 25.04 25.04 41.78 3.96
669 680 4.873817 TGGCAGAATATTAATGCATGCAC 58.126 39.130 25.37 7.61 41.78 4.57
670 681 4.341520 TGGCAGAATATTAATGCATGCACA 59.658 37.500 25.37 11.50 41.78 4.57
671 682 5.011227 TGGCAGAATATTAATGCATGCACAT 59.989 36.000 25.37 17.60 41.78 3.21
747 1077 2.564771 TCCCCGCGTAGGATATATACG 58.435 52.381 10.82 13.15 46.71 3.06
759 1089 9.038803 CGTAGGATATATACGCACTACTATTGA 57.961 37.037 6.95 0.00 39.50 2.57
937 1299 0.967380 GGAACTGCCTTGTCCCATGG 60.967 60.000 4.14 4.14 0.00 3.66
955 1317 4.325119 CATGGATTCTCACATCCCATCTC 58.675 47.826 0.00 0.00 42.14 2.75
1263 1646 0.032403 CGTACAAGTGGTGGTCGGAA 59.968 55.000 0.00 0.00 0.00 4.30
1272 1655 3.329889 TGGTCGGAAGGGCTGCAT 61.330 61.111 0.50 0.00 0.00 3.96
1388 1771 4.664188 GACGAGAAGATCTGGTACTTCAC 58.336 47.826 0.00 0.00 43.13 3.18
1428 1832 6.312672 TGTGTACATTTCATGTTCGTATCTGG 59.687 38.462 0.00 0.00 41.63 3.86
1435 2161 4.258543 TCATGTTCGTATCTGGGGTTTTC 58.741 43.478 0.00 0.00 0.00 2.29
1440 2166 5.188163 TGTTCGTATCTGGGGTTTTCATCTA 59.812 40.000 0.00 0.00 0.00 1.98
1444 2170 7.343357 TCGTATCTGGGGTTTTCATCTAATTT 58.657 34.615 0.00 0.00 0.00 1.82
1445 2171 7.832187 TCGTATCTGGGGTTTTCATCTAATTTT 59.168 33.333 0.00 0.00 0.00 1.82
1446 2172 7.915397 CGTATCTGGGGTTTTCATCTAATTTTG 59.085 37.037 0.00 0.00 0.00 2.44
1449 2175 7.666623 TCTGGGGTTTTCATCTAATTTTGAAC 58.333 34.615 0.00 0.00 31.87 3.18
1495 2584 8.752005 ATATAGAATTAATGCAACAGTGTGGT 57.248 30.769 0.00 0.00 0.00 4.16
1524 2613 2.036958 TTGGCTATCAACCACCGATG 57.963 50.000 0.00 0.00 36.76 3.84
1531 4665 4.373116 AACCACCGATGCGACGCT 62.373 61.111 22.08 6.44 0.00 5.07
1542 4676 2.352001 CGACGCTCGTGTATCGGG 60.352 66.667 0.00 0.00 43.80 5.14
1546 4680 2.353607 GCTCGTGTATCGGGAGCG 60.354 66.667 0.00 0.00 43.64 5.03
1552 4686 1.266175 CGTGTATCGGGAGCGTCTATT 59.734 52.381 0.00 0.00 35.71 1.73
1553 4687 2.287427 CGTGTATCGGGAGCGTCTATTT 60.287 50.000 0.00 0.00 35.71 1.40
1556 4690 4.916249 GTGTATCGGGAGCGTCTATTTTAG 59.084 45.833 0.00 0.00 0.00 1.85
1562 4696 4.809426 CGGGAGCGTCTATTTTAGTCAAAT 59.191 41.667 0.00 0.00 38.69 2.32
1565 4699 7.170998 CGGGAGCGTCTATTTTAGTCAAATTAT 59.829 37.037 0.00 0.00 36.43 1.28
2228 6505 3.089874 TCCGGCAGGGGAAGATGG 61.090 66.667 2.05 0.00 38.33 3.51
3520 7895 1.226407 CGAGATCAGCTTCGACGCA 60.226 57.895 16.85 0.00 0.00 5.24
3521 7896 1.467556 CGAGATCAGCTTCGACGCAC 61.468 60.000 16.85 4.71 0.00 5.34
3522 7897 1.467556 GAGATCAGCTTCGACGCACG 61.468 60.000 16.85 6.83 44.09 5.34
3523 7898 3.131661 GATCAGCTTCGACGCACGC 62.132 63.158 16.85 0.00 42.26 5.34
3535 7910 1.463444 GACGCACGCCTGAATTAACTT 59.537 47.619 0.00 0.00 0.00 2.66
3536 7911 1.463444 ACGCACGCCTGAATTAACTTC 59.537 47.619 0.00 0.00 0.00 3.01
3608 7988 3.578272 GGTTGTTGCGGCGACACA 61.578 61.111 22.22 9.59 0.00 3.72
3609 7989 2.405594 GTTGTTGCGGCGACACAA 59.594 55.556 22.22 15.70 0.00 3.33
3610 7990 1.008995 GTTGTTGCGGCGACACAAT 60.009 52.632 22.22 0.00 34.43 2.71
3611 7991 0.593773 GTTGTTGCGGCGACACAATT 60.594 50.000 22.22 0.00 34.43 2.32
3622 8002 3.374678 GGCGACACAATTAATTAACCGGA 59.625 43.478 9.46 0.00 0.00 5.14
3630 8010 3.447918 TTAATTAACCGGAGCCTCGAG 57.552 47.619 9.46 5.13 0.00 4.04
3680 8060 4.766404 ATGTTTGCCAGTTTAGTGTAGC 57.234 40.909 0.00 0.00 0.00 3.58
3681 8061 3.815809 TGTTTGCCAGTTTAGTGTAGCT 58.184 40.909 0.00 0.00 0.00 3.32
3682 8062 4.963373 TGTTTGCCAGTTTAGTGTAGCTA 58.037 39.130 0.00 0.00 0.00 3.32
3762 8144 7.708322 TCAATGAGATTCTTATTTCTGTCTCCG 59.292 37.037 1.15 0.00 33.04 4.63
3770 8152 7.406031 TCTTATTTCTGTCTCCGTAATCTGT 57.594 36.000 0.00 0.00 0.00 3.41
3820 8213 4.499183 CAAGGGGCGCATGTTTAATAAAA 58.501 39.130 10.83 0.00 0.00 1.52
3961 8355 5.240623 CGACTCAAGAGCTCCTATGAATAGT 59.759 44.000 10.93 7.37 0.00 2.12
3977 8371 6.673154 TGAATAGTGTGAAGATGCTTGATG 57.327 37.500 0.00 0.00 0.00 3.07
3982 8376 4.823442 AGTGTGAAGATGCTTGATGTTGAA 59.177 37.500 0.00 0.00 0.00 2.69
3992 8386 3.056322 GCTTGATGTTGAAAAGGATGCCT 60.056 43.478 0.00 0.00 33.87 4.75
3999 8393 1.379044 AAAAGGATGCCTGCCTCCG 60.379 57.895 7.65 0.00 36.14 4.63
4023 8422 2.924302 TCACTGTCCTACCTCTTCCCTA 59.076 50.000 0.00 0.00 0.00 3.53
4083 8483 4.884961 AGATATAGTTAGCCGGATGGGAT 58.115 43.478 5.05 0.00 38.47 3.85
4122 8522 4.053295 TGACAAGTTTGTTACGAGTAGGC 58.947 43.478 0.00 0.00 42.43 3.93
4147 8547 2.624636 GCGCCCAAGCTAAAGTACTAA 58.375 47.619 0.00 0.00 36.60 2.24
4149 8549 3.437741 GCGCCCAAGCTAAAGTACTAAAA 59.562 43.478 0.00 0.00 36.60 1.52
4150 8550 4.095932 GCGCCCAAGCTAAAGTACTAAAAT 59.904 41.667 0.00 0.00 36.60 1.82
4164 8564 8.779354 AAGTACTAAAATGTTCTCCAAGCTAG 57.221 34.615 0.00 0.00 0.00 3.42
4167 8567 3.439857 AAATGTTCTCCAAGCTAGGCA 57.560 42.857 0.00 0.00 0.00 4.75
4169 8569 2.949177 TGTTCTCCAAGCTAGGCAAA 57.051 45.000 0.00 0.00 0.00 3.68
4213 8613 0.818296 ACGGCGCAAGAATCTCTACT 59.182 50.000 10.83 0.00 43.02 2.57
4240 8640 3.431673 TTTGGATTCCAATTTTGCCCC 57.568 42.857 18.62 0.00 43.55 5.80
4246 8646 3.652057 TTCCAATTTTGCCCCAAACAA 57.348 38.095 0.00 0.00 32.79 2.83
4249 8649 3.137176 TCCAATTTTGCCCCAAACAATCA 59.863 39.130 0.00 0.00 32.79 2.57
4256 8656 3.439154 TGCCCCAAACAATCATGTACAT 58.561 40.909 1.41 1.41 39.40 2.29
4266 8666 7.994425 AACAATCATGTACATAACTCCACAA 57.006 32.000 8.32 0.00 39.40 3.33
4311 8712 1.000274 AGAATGTGGTTGGCGCTTTTC 60.000 47.619 7.64 0.00 0.00 2.29
4329 8730 0.901827 TCGGAGCTCCACATAAAGCA 59.098 50.000 31.67 1.23 41.06 3.91
4336 8737 2.554032 GCTCCACATAAAGCACAACACT 59.446 45.455 0.00 0.00 38.42 3.55
4352 8753 1.423541 ACACTTGTTGCCCAGACCATA 59.576 47.619 0.00 0.00 0.00 2.74
4353 8754 2.041620 ACACTTGTTGCCCAGACCATAT 59.958 45.455 0.00 0.00 0.00 1.78
4354 8755 3.265737 ACACTTGTTGCCCAGACCATATA 59.734 43.478 0.00 0.00 0.00 0.86
4355 8756 4.263727 ACACTTGTTGCCCAGACCATATAA 60.264 41.667 0.00 0.00 0.00 0.98
4356 8757 4.096382 CACTTGTTGCCCAGACCATATAAC 59.904 45.833 0.00 0.00 0.00 1.89
4357 8758 4.263727 ACTTGTTGCCCAGACCATATAACA 60.264 41.667 0.00 0.00 0.00 2.41
4391 8792 1.735376 TAGCGAAGGCCAGACGATCC 61.735 60.000 17.66 3.22 41.24 3.36
4392 8793 2.892640 CGAAGGCCAGACGATCCA 59.107 61.111 5.01 0.00 0.00 3.41
4393 8794 1.443407 CGAAGGCCAGACGATCCAT 59.557 57.895 5.01 0.00 0.00 3.41
4394 8795 0.179073 CGAAGGCCAGACGATCCATT 60.179 55.000 5.01 0.00 0.00 3.16
4395 8796 1.743772 CGAAGGCCAGACGATCCATTT 60.744 52.381 5.01 0.00 0.00 2.32
4396 8797 1.672881 GAAGGCCAGACGATCCATTTG 59.327 52.381 5.01 0.00 0.00 2.32
4397 8798 0.749454 AGGCCAGACGATCCATTTGC 60.749 55.000 5.01 0.00 0.00 3.68
4398 8799 1.353103 GCCAGACGATCCATTTGCG 59.647 57.895 0.00 0.00 0.00 4.85
4399 8800 1.353103 CCAGACGATCCATTTGCGC 59.647 57.895 0.00 0.00 0.00 6.09
4400 8801 1.091771 CCAGACGATCCATTTGCGCT 61.092 55.000 9.73 0.00 0.00 5.92
4401 8802 0.729116 CAGACGATCCATTTGCGCTT 59.271 50.000 9.73 0.00 0.00 4.68
4402 8803 1.933181 CAGACGATCCATTTGCGCTTA 59.067 47.619 9.73 0.00 0.00 3.09
4403 8804 1.933853 AGACGATCCATTTGCGCTTAC 59.066 47.619 9.73 0.00 0.00 2.34
4404 8805 1.003866 GACGATCCATTTGCGCTTACC 60.004 52.381 9.73 0.00 0.00 2.85
4405 8806 1.013596 CGATCCATTTGCGCTTACCA 58.986 50.000 9.73 0.00 0.00 3.25
4406 8807 1.400142 CGATCCATTTGCGCTTACCAA 59.600 47.619 9.73 0.00 0.00 3.67
4407 8808 2.159448 CGATCCATTTGCGCTTACCAAA 60.159 45.455 9.73 0.00 36.70 3.28
4408 8809 3.489059 CGATCCATTTGCGCTTACCAAAT 60.489 43.478 9.73 2.49 42.02 2.32
4416 8817 5.826601 TTGCGCTTACCAAATGAATATGA 57.173 34.783 9.73 0.00 0.00 2.15
4417 8818 5.826601 TGCGCTTACCAAATGAATATGAA 57.173 34.783 9.73 0.00 0.00 2.57
4418 8819 6.201226 TGCGCTTACCAAATGAATATGAAA 57.799 33.333 9.73 0.00 0.00 2.69
4419 8820 6.264832 TGCGCTTACCAAATGAATATGAAAG 58.735 36.000 9.73 0.00 0.00 2.62
4420 8821 6.127758 TGCGCTTACCAAATGAATATGAAAGT 60.128 34.615 9.73 0.00 0.00 2.66
4421 8822 6.197096 GCGCTTACCAAATGAATATGAAAGTG 59.803 38.462 0.00 0.00 0.00 3.16
4422 8823 7.471721 CGCTTACCAAATGAATATGAAAGTGA 58.528 34.615 0.00 0.00 0.00 3.41
4423 8824 8.131100 CGCTTACCAAATGAATATGAAAGTGAT 58.869 33.333 0.00 0.00 0.00 3.06
4436 8837 9.801873 AATATGAAAGTGATAAATCCCAAAACG 57.198 29.630 0.00 0.00 0.00 3.60
4437 8838 6.642707 TGAAAGTGATAAATCCCAAAACGT 57.357 33.333 0.00 0.00 0.00 3.99
4438 8839 7.045126 TGAAAGTGATAAATCCCAAAACGTT 57.955 32.000 0.00 0.00 0.00 3.99
4439 8840 7.142680 TGAAAGTGATAAATCCCAAAACGTTC 58.857 34.615 0.00 0.00 0.00 3.95
4440 8841 5.291293 AGTGATAAATCCCAAAACGTTCG 57.709 39.130 0.00 0.00 0.00 3.95
4441 8842 4.155280 AGTGATAAATCCCAAAACGTTCGG 59.845 41.667 0.00 5.41 0.00 4.30
4442 8843 4.154556 GTGATAAATCCCAAAACGTTCGGA 59.845 41.667 16.26 14.33 0.00 4.55
4443 8844 4.760715 TGATAAATCCCAAAACGTTCGGAA 59.239 37.500 16.26 0.00 0.00 4.30
4444 8845 5.416326 TGATAAATCCCAAAACGTTCGGAAT 59.584 36.000 16.26 6.12 0.00 3.01
4445 8846 4.594123 AAATCCCAAAACGTTCGGAATT 57.406 36.364 16.26 11.06 0.00 2.17
4446 8847 4.594123 AATCCCAAAACGTTCGGAATTT 57.406 36.364 16.26 5.49 0.00 1.82
4447 8848 5.708877 AATCCCAAAACGTTCGGAATTTA 57.291 34.783 16.26 0.00 0.00 1.40
4448 8849 4.752661 TCCCAAAACGTTCGGAATTTAG 57.247 40.909 16.26 1.40 0.00 1.85
4449 8850 3.502979 TCCCAAAACGTTCGGAATTTAGG 59.497 43.478 16.26 2.81 0.00 2.69
4450 8851 3.239254 CCAAAACGTTCGGAATTTAGGC 58.761 45.455 10.47 0.00 0.00 3.93
4451 8852 3.304794 CCAAAACGTTCGGAATTTAGGCA 60.305 43.478 10.47 0.00 0.00 4.75
4452 8853 4.481463 CAAAACGTTCGGAATTTAGGCAT 58.519 39.130 0.00 0.00 0.00 4.40
4453 8854 3.757745 AACGTTCGGAATTTAGGCATG 57.242 42.857 0.00 0.00 0.00 4.06
4454 8855 2.014128 ACGTTCGGAATTTAGGCATGG 58.986 47.619 0.00 0.00 0.00 3.66
4455 8856 1.268539 CGTTCGGAATTTAGGCATGGC 60.269 52.381 12.14 12.14 0.00 4.40
4456 8857 1.748493 GTTCGGAATTTAGGCATGGCA 59.252 47.619 22.64 4.62 0.00 4.92
4457 8858 2.136298 TCGGAATTTAGGCATGGCAA 57.864 45.000 22.64 8.33 0.00 4.52
4458 8859 2.665165 TCGGAATTTAGGCATGGCAAT 58.335 42.857 22.64 10.44 0.00 3.56
4459 8860 2.622942 TCGGAATTTAGGCATGGCAATC 59.377 45.455 22.64 10.98 0.00 2.67
4460 8861 2.288395 CGGAATTTAGGCATGGCAATCC 60.288 50.000 22.64 17.72 0.00 3.01
4461 8862 2.288395 GGAATTTAGGCATGGCAATCCG 60.288 50.000 22.64 0.00 34.14 4.18
4462 8863 2.363306 ATTTAGGCATGGCAATCCGA 57.637 45.000 22.64 1.26 34.14 4.55
4463 8864 2.136298 TTTAGGCATGGCAATCCGAA 57.864 45.000 22.64 0.00 34.14 4.30
4464 8865 2.363306 TTAGGCATGGCAATCCGAAT 57.637 45.000 22.64 0.00 34.14 3.34
4465 8866 1.608055 TAGGCATGGCAATCCGAATG 58.392 50.000 22.64 0.00 34.14 2.67
4466 8867 0.396139 AGGCATGGCAATCCGAATGT 60.396 50.000 22.64 0.00 34.14 2.71
4467 8868 0.461135 GGCATGGCAATCCGAATGTT 59.539 50.000 15.47 0.00 34.14 2.71
4468 8869 1.134729 GGCATGGCAATCCGAATGTTT 60.135 47.619 15.47 0.00 34.14 2.83
4469 8870 2.620242 GCATGGCAATCCGAATGTTTT 58.380 42.857 0.00 0.00 34.14 2.43
4470 8871 3.002102 GCATGGCAATCCGAATGTTTTT 58.998 40.909 0.00 0.00 34.14 1.94
4471 8872 3.062504 GCATGGCAATCCGAATGTTTTTC 59.937 43.478 0.00 0.00 34.14 2.29
4472 8873 4.244066 CATGGCAATCCGAATGTTTTTCA 58.756 39.130 0.00 0.00 34.14 2.69
4473 8874 4.533919 TGGCAATCCGAATGTTTTTCAT 57.466 36.364 0.00 0.00 34.88 2.57
4474 8875 4.244066 TGGCAATCCGAATGTTTTTCATG 58.756 39.130 0.00 0.00 34.11 3.07
4475 8876 3.618150 GGCAATCCGAATGTTTTTCATGG 59.382 43.478 0.00 0.00 36.81 3.66
4476 8877 3.062504 GCAATCCGAATGTTTTTCATGGC 59.937 43.478 0.00 0.00 36.81 4.40
4477 8878 4.244066 CAATCCGAATGTTTTTCATGGCA 58.756 39.130 0.00 0.00 36.81 4.92
4478 8879 4.533919 ATCCGAATGTTTTTCATGGCAA 57.466 36.364 0.00 0.00 36.81 4.52
4479 8880 3.648009 TCCGAATGTTTTTCATGGCAAC 58.352 40.909 0.00 0.00 36.81 4.17
4480 8881 3.320541 TCCGAATGTTTTTCATGGCAACT 59.679 39.130 0.00 0.00 36.81 3.16
4481 8882 4.057432 CCGAATGTTTTTCATGGCAACTT 58.943 39.130 0.00 0.00 36.81 2.66
4482 8883 4.511082 CCGAATGTTTTTCATGGCAACTTT 59.489 37.500 0.00 0.00 36.81 2.66
4483 8884 5.007528 CCGAATGTTTTTCATGGCAACTTTT 59.992 36.000 0.00 0.00 36.81 2.27
4484 8885 5.902981 CGAATGTTTTTCATGGCAACTTTTG 59.097 36.000 0.00 0.00 36.81 2.44
4485 8886 6.456718 CGAATGTTTTTCATGGCAACTTTTGT 60.457 34.615 0.00 0.00 36.81 2.83
4486 8887 6.756299 ATGTTTTTCATGGCAACTTTTGTT 57.244 29.167 0.00 0.00 38.07 2.83
4487 8888 6.175712 TGTTTTTCATGGCAACTTTTGTTC 57.824 33.333 0.00 0.00 41.35 3.18
4488 8889 5.702670 TGTTTTTCATGGCAACTTTTGTTCA 59.297 32.000 0.00 0.00 41.35 3.18
4489 8890 5.793026 TTTTCATGGCAACTTTTGTTCAC 57.207 34.783 0.00 0.00 41.35 3.18
4490 8891 3.077229 TCATGGCAACTTTTGTTCACG 57.923 42.857 0.00 0.00 41.35 4.35
4491 8892 1.522258 CATGGCAACTTTTGTTCACGC 59.478 47.619 0.00 0.00 41.35 5.34
4492 8893 0.524392 TGGCAACTTTTGTTCACGCG 60.524 50.000 3.53 3.53 41.35 6.01
4493 8894 0.248296 GGCAACTTTTGTTCACGCGA 60.248 50.000 15.93 0.00 41.35 5.87
4494 8895 1.112459 GCAACTTTTGTTCACGCGAG 58.888 50.000 15.93 4.59 41.35 5.03
4495 8896 1.741993 CAACTTTTGTTCACGCGAGG 58.258 50.000 15.93 4.29 41.35 4.63
4496 8897 1.063469 CAACTTTTGTTCACGCGAGGT 59.937 47.619 15.93 0.00 41.35 3.85
4497 8898 1.375551 ACTTTTGTTCACGCGAGGTT 58.624 45.000 15.93 0.00 0.00 3.50
4498 8899 1.063469 ACTTTTGTTCACGCGAGGTTG 59.937 47.619 15.93 0.00 0.00 3.77
4499 8900 1.329292 CTTTTGTTCACGCGAGGTTGA 59.671 47.619 15.93 2.15 0.00 3.18
4500 8901 0.653636 TTTGTTCACGCGAGGTTGAC 59.346 50.000 15.93 3.24 0.00 3.18
4501 8902 0.460459 TTGTTCACGCGAGGTTGACA 60.460 50.000 15.93 6.00 0.00 3.58
4502 8903 0.460459 TGTTCACGCGAGGTTGACAA 60.460 50.000 15.93 0.00 0.00 3.18
4503 8904 0.653636 GTTCACGCGAGGTTGACAAA 59.346 50.000 15.93 0.00 0.00 2.83
4504 8905 0.653636 TTCACGCGAGGTTGACAAAC 59.346 50.000 15.93 0.00 35.40 2.93
4505 8906 0.460459 TCACGCGAGGTTGACAAACA 60.460 50.000 15.93 0.00 38.10 2.83
4506 8907 0.315869 CACGCGAGGTTGACAAACAC 60.316 55.000 15.93 0.00 38.10 3.32
4507 8908 1.083657 CGCGAGGTTGACAAACACG 60.084 57.895 17.29 17.29 38.10 4.49
4508 8909 1.484227 CGCGAGGTTGACAAACACGA 61.484 55.000 24.32 0.00 38.76 4.35
4509 8910 0.042448 GCGAGGTTGACAAACACGAC 60.042 55.000 24.32 12.91 38.76 4.34
4510 8911 1.282817 CGAGGTTGACAAACACGACA 58.717 50.000 16.75 0.00 38.76 4.35
4511 8912 1.661617 CGAGGTTGACAAACACGACAA 59.338 47.619 16.75 0.00 38.76 3.18
4512 8913 2.286833 CGAGGTTGACAAACACGACAAT 59.713 45.455 16.75 0.00 38.76 2.71
4513 8914 3.242608 CGAGGTTGACAAACACGACAATT 60.243 43.478 16.75 0.00 38.76 2.32
4514 8915 4.668289 GAGGTTGACAAACACGACAATTT 58.332 39.130 5.91 0.00 38.10 1.82
4515 8916 5.066968 AGGTTGACAAACACGACAATTTT 57.933 34.783 5.91 0.00 38.10 1.82
4516 8917 5.474825 AGGTTGACAAACACGACAATTTTT 58.525 33.333 5.91 0.00 38.10 1.94
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.713288 TCTTAGGTTGTGACAAGTGACG 58.287 45.455 0.00 0.00 0.00 4.35
2 3 5.607939 TCTTCTTAGGTTGTGACAAGTGA 57.392 39.130 0.00 0.00 0.00 3.41
5 6 8.091449 ACTCTAATCTTCTTAGGTTGTGACAAG 58.909 37.037 0.00 0.00 0.00 3.16
6 7 7.872993 CACTCTAATCTTCTTAGGTTGTGACAA 59.127 37.037 0.00 0.00 0.00 3.18
7 8 7.232737 TCACTCTAATCTTCTTAGGTTGTGACA 59.767 37.037 0.00 0.00 30.62 3.58
8 9 7.603651 TCACTCTAATCTTCTTAGGTTGTGAC 58.396 38.462 0.00 0.00 30.62 3.67
9 10 7.776618 TCACTCTAATCTTCTTAGGTTGTGA 57.223 36.000 0.00 0.00 31.75 3.58
10 11 8.474025 AGATCACTCTAATCTTCTTAGGTTGTG 58.526 37.037 0.00 0.00 29.01 3.33
11 12 8.602472 AGATCACTCTAATCTTCTTAGGTTGT 57.398 34.615 0.00 0.00 29.01 3.32
12 13 9.883142 AAAGATCACTCTAATCTTCTTAGGTTG 57.117 33.333 0.00 0.00 41.47 3.77
42 43 8.512138 CGAAATTACCAATTGAGGAGTACTTTT 58.488 33.333 7.12 3.83 0.00 2.27
43 44 7.881232 TCGAAATTACCAATTGAGGAGTACTTT 59.119 33.333 7.12 7.22 0.00 2.66
44 45 7.391620 TCGAAATTACCAATTGAGGAGTACTT 58.608 34.615 7.12 0.00 0.00 2.24
45 46 6.942976 TCGAAATTACCAATTGAGGAGTACT 58.057 36.000 7.12 0.00 0.00 2.73
46 47 7.494625 TGATCGAAATTACCAATTGAGGAGTAC 59.505 37.037 7.12 0.00 0.00 2.73
47 48 7.494625 GTGATCGAAATTACCAATTGAGGAGTA 59.505 37.037 7.12 0.00 0.00 2.59
48 49 6.316390 GTGATCGAAATTACCAATTGAGGAGT 59.684 38.462 7.12 0.00 0.00 3.85
49 50 6.238484 GGTGATCGAAATTACCAATTGAGGAG 60.238 42.308 7.12 0.00 40.45 3.69
50 51 5.588648 GGTGATCGAAATTACCAATTGAGGA 59.411 40.000 7.12 0.00 40.45 3.71
51 52 5.356751 TGGTGATCGAAATTACCAATTGAGG 59.643 40.000 7.12 0.00 45.68 3.86
52 53 6.435430 TGGTGATCGAAATTACCAATTGAG 57.565 37.500 7.12 0.00 45.68 3.02
58 59 5.047731 TGCAAATTGGTGATCGAAATTACCA 60.048 36.000 8.72 8.72 46.65 3.25
59 60 5.406649 TGCAAATTGGTGATCGAAATTACC 58.593 37.500 0.00 0.00 40.99 2.85
60 61 8.801715 ATATGCAAATTGGTGATCGAAATTAC 57.198 30.769 0.00 0.00 0.00 1.89
62 63 9.985730 AATATATGCAAATTGGTGATCGAAATT 57.014 25.926 0.00 0.00 0.00 1.82
63 64 9.985730 AAATATATGCAAATTGGTGATCGAAAT 57.014 25.926 0.00 0.00 0.00 2.17
64 65 9.247126 CAAATATATGCAAATTGGTGATCGAAA 57.753 29.630 0.00 0.00 0.00 3.46
65 66 7.866898 CCAAATATATGCAAATTGGTGATCGAA 59.133 33.333 0.00 0.00 36.60 3.71
66 67 7.369607 CCAAATATATGCAAATTGGTGATCGA 58.630 34.615 0.00 0.00 36.60 3.59
67 68 6.587226 CCCAAATATATGCAAATTGGTGATCG 59.413 38.462 10.74 0.00 39.07 3.69
68 69 7.669427 TCCCAAATATATGCAAATTGGTGATC 58.331 34.615 10.74 0.00 39.07 2.92
69 70 7.510001 TCTCCCAAATATATGCAAATTGGTGAT 59.490 33.333 10.74 0.00 39.07 3.06
70 71 6.838090 TCTCCCAAATATATGCAAATTGGTGA 59.162 34.615 10.74 6.98 39.07 4.02
71 72 7.053316 TCTCCCAAATATATGCAAATTGGTG 57.947 36.000 10.74 5.33 39.07 4.17
72 73 7.673641 TTCTCCCAAATATATGCAAATTGGT 57.326 32.000 10.74 0.00 39.07 3.67
73 74 9.563748 AAATTCTCCCAAATATATGCAAATTGG 57.436 29.630 6.25 6.25 40.14 3.16
88 89 9.253832 ACATGTATGTCATTAAAATTCTCCCAA 57.746 29.630 0.00 0.00 35.87 4.12
89 90 8.821686 ACATGTATGTCATTAAAATTCTCCCA 57.178 30.769 0.00 0.00 35.87 4.37
103 104 9.855021 CGAATCCAACTATATACATGTATGTCA 57.145 33.333 25.48 8.76 41.97 3.58
104 105 8.808529 GCGAATCCAACTATATACATGTATGTC 58.191 37.037 25.48 5.58 41.97 3.06
105 106 8.311109 TGCGAATCCAACTATATACATGTATGT 58.689 33.333 25.48 21.55 44.48 2.29
106 107 8.702163 TGCGAATCCAACTATATACATGTATG 57.298 34.615 25.48 13.17 0.00 2.39
107 108 9.890629 AATGCGAATCCAACTATATACATGTAT 57.109 29.630 21.57 21.57 0.00 2.29
109 110 9.719355 TTAATGCGAATCCAACTATATACATGT 57.281 29.630 2.69 2.69 0.00 3.21
112 113 9.639601 CTCTTAATGCGAATCCAACTATATACA 57.360 33.333 0.00 0.00 0.00 2.29
113 114 9.088512 CCTCTTAATGCGAATCCAACTATATAC 57.911 37.037 0.00 0.00 0.00 1.47
114 115 9.031537 TCCTCTTAATGCGAATCCAACTATATA 57.968 33.333 0.00 0.00 0.00 0.86
115 116 7.907389 TCCTCTTAATGCGAATCCAACTATAT 58.093 34.615 0.00 0.00 0.00 0.86
116 117 7.297936 TCCTCTTAATGCGAATCCAACTATA 57.702 36.000 0.00 0.00 0.00 1.31
117 118 6.174720 TCCTCTTAATGCGAATCCAACTAT 57.825 37.500 0.00 0.00 0.00 2.12
118 119 5.607939 TCCTCTTAATGCGAATCCAACTA 57.392 39.130 0.00 0.00 0.00 2.24
119 120 4.487714 TCCTCTTAATGCGAATCCAACT 57.512 40.909 0.00 0.00 0.00 3.16
120 121 5.296780 TCATTCCTCTTAATGCGAATCCAAC 59.703 40.000 0.00 0.00 36.89 3.77
121 122 5.436175 TCATTCCTCTTAATGCGAATCCAA 58.564 37.500 0.00 0.00 36.89 3.53
122 123 5.034852 TCATTCCTCTTAATGCGAATCCA 57.965 39.130 0.00 0.00 36.89 3.41
123 124 6.377327 TTTCATTCCTCTTAATGCGAATCC 57.623 37.500 0.00 0.00 36.89 3.01
124 125 7.040823 AGGATTTCATTCCTCTTAATGCGAATC 60.041 37.037 0.00 0.00 42.71 2.52
125 126 6.774656 AGGATTTCATTCCTCTTAATGCGAAT 59.225 34.615 0.00 0.00 42.71 3.34
126 127 6.122277 AGGATTTCATTCCTCTTAATGCGAA 58.878 36.000 0.00 0.00 42.71 4.70
127 128 5.684704 AGGATTTCATTCCTCTTAATGCGA 58.315 37.500 0.00 0.00 42.71 5.10
128 129 6.708054 AGTAGGATTTCATTCCTCTTAATGCG 59.292 38.462 0.00 0.00 42.71 4.73
129 130 8.994170 GTAGTAGGATTTCATTCCTCTTAATGC 58.006 37.037 0.00 0.00 42.71 3.56
134 135 9.454859 CAAAAGTAGTAGGATTTCATTCCTCTT 57.545 33.333 0.00 0.00 42.71 2.85
135 136 7.554476 GCAAAAGTAGTAGGATTTCATTCCTCT 59.446 37.037 0.00 0.00 42.71 3.69
136 137 7.554476 AGCAAAAGTAGTAGGATTTCATTCCTC 59.446 37.037 0.00 0.00 42.71 3.71
138 139 7.475840 CAGCAAAAGTAGTAGGATTTCATTCC 58.524 38.462 0.00 0.00 35.90 3.01
139 140 6.969473 GCAGCAAAAGTAGTAGGATTTCATTC 59.031 38.462 0.00 0.00 0.00 2.67
140 141 6.434028 TGCAGCAAAAGTAGTAGGATTTCATT 59.566 34.615 0.00 0.00 0.00 2.57
141 142 5.945784 TGCAGCAAAAGTAGTAGGATTTCAT 59.054 36.000 0.00 0.00 0.00 2.57
142 143 5.312895 TGCAGCAAAAGTAGTAGGATTTCA 58.687 37.500 0.00 0.00 0.00 2.69
143 144 5.880054 TGCAGCAAAAGTAGTAGGATTTC 57.120 39.130 0.00 0.00 0.00 2.17
144 145 6.037172 CGTATGCAGCAAAAGTAGTAGGATTT 59.963 38.462 0.00 0.00 0.00 2.17
145 146 5.523916 CGTATGCAGCAAAAGTAGTAGGATT 59.476 40.000 0.00 0.00 0.00 3.01
146 147 5.050490 CGTATGCAGCAAAAGTAGTAGGAT 58.950 41.667 0.00 0.00 0.00 3.24
147 148 4.081862 ACGTATGCAGCAAAAGTAGTAGGA 60.082 41.667 0.00 0.00 0.00 2.94
148 149 4.181578 ACGTATGCAGCAAAAGTAGTAGG 58.818 43.478 0.00 0.00 0.00 3.18
149 150 6.144080 GGATACGTATGCAGCAAAAGTAGTAG 59.856 42.308 20.73 0.00 0.00 2.57
150 151 5.981315 GGATACGTATGCAGCAAAAGTAGTA 59.019 40.000 20.73 0.00 0.00 1.82
151 152 4.809426 GGATACGTATGCAGCAAAAGTAGT 59.191 41.667 20.73 0.00 0.00 2.73
152 153 4.211374 GGGATACGTATGCAGCAAAAGTAG 59.789 45.833 25.66 0.00 37.60 2.57
153 154 4.124238 GGGATACGTATGCAGCAAAAGTA 58.876 43.478 25.66 4.40 37.60 2.24
154 155 2.943033 GGGATACGTATGCAGCAAAAGT 59.057 45.455 25.66 1.97 37.60 2.66
155 156 2.290641 GGGGATACGTATGCAGCAAAAG 59.709 50.000 25.66 0.00 37.60 2.27
156 157 2.294074 GGGGATACGTATGCAGCAAAA 58.706 47.619 25.66 0.00 37.60 2.44
157 158 1.808512 CGGGGATACGTATGCAGCAAA 60.809 52.381 25.66 0.00 37.60 3.68
158 159 0.249699 CGGGGATACGTATGCAGCAA 60.250 55.000 25.66 0.00 37.60 3.91
159 160 1.365999 CGGGGATACGTATGCAGCA 59.634 57.895 25.66 0.00 37.60 4.41
160 161 2.027625 GCGGGGATACGTATGCAGC 61.028 63.158 25.66 24.17 35.98 5.25
161 162 1.374252 GGCGGGGATACGTATGCAG 60.374 63.158 25.66 19.57 35.98 4.41
162 163 2.738480 GGCGGGGATACGTATGCA 59.262 61.111 25.66 0.00 35.98 3.96
163 164 2.431942 CGGCGGGGATACGTATGC 60.432 66.667 17.89 17.89 35.98 3.14
164 165 1.372499 CACGGCGGGGATACGTATG 60.372 63.158 13.97 0.00 39.02 2.39
165 166 0.537143 TACACGGCGGGGATACGTAT 60.537 55.000 16.11 8.05 39.02 3.06
166 167 1.153066 TACACGGCGGGGATACGTA 60.153 57.895 16.11 0.00 39.02 3.57
167 168 2.440065 TACACGGCGGGGATACGT 60.440 61.111 16.11 0.00 42.17 3.57
168 169 2.333938 CTACACGGCGGGGATACG 59.666 66.667 16.11 0.00 37.60 3.06
169 170 1.183676 ATCCTACACGGCGGGGATAC 61.184 60.000 16.11 0.00 36.88 2.24
170 171 0.405198 TATCCTACACGGCGGGGATA 59.595 55.000 16.11 19.06 39.11 2.59
171 172 0.252103 ATATCCTACACGGCGGGGAT 60.252 55.000 16.11 20.03 40.99 3.85
172 173 0.405198 TATATCCTACACGGCGGGGA 59.595 55.000 16.11 14.44 0.00 4.81
173 174 1.481871 ATATATCCTACACGGCGGGG 58.518 55.000 16.11 6.70 0.00 5.73
174 175 3.285484 AGTATATATCCTACACGGCGGG 58.715 50.000 8.04 8.04 0.00 6.13
175 176 3.943381 TGAGTATATATCCTACACGGCGG 59.057 47.826 13.24 2.35 0.00 6.13
176 177 5.066117 ACATGAGTATATATCCTACACGGCG 59.934 44.000 4.80 4.80 0.00 6.46
177 178 6.452494 ACATGAGTATATATCCTACACGGC 57.548 41.667 0.00 0.00 0.00 5.68
208 209 9.799106 CCTACTGGACATTAATTGGAGATTATT 57.201 33.333 0.00 0.00 34.57 1.40
209 210 9.170890 TCCTACTGGACATTAATTGGAGATTAT 57.829 33.333 0.00 0.00 37.46 1.28
210 211 8.561536 TCCTACTGGACATTAATTGGAGATTA 57.438 34.615 0.00 0.00 37.46 1.75
211 212 7.451731 TCCTACTGGACATTAATTGGAGATT 57.548 36.000 0.00 0.00 37.46 2.40
212 213 7.092444 TGTTCCTACTGGACATTAATTGGAGAT 60.092 37.037 0.00 0.00 43.06 2.75
213 214 6.214615 TGTTCCTACTGGACATTAATTGGAGA 59.785 38.462 0.00 0.00 43.06 3.71
214 215 6.316390 GTGTTCCTACTGGACATTAATTGGAG 59.684 42.308 0.00 0.00 43.06 3.86
215 216 6.177610 GTGTTCCTACTGGACATTAATTGGA 58.822 40.000 0.00 0.00 43.06 3.53
216 217 5.943416 TGTGTTCCTACTGGACATTAATTGG 59.057 40.000 0.00 0.00 43.06 3.16
217 218 6.429692 TGTGTGTTCCTACTGGACATTAATTG 59.570 38.462 0.00 0.00 43.06 2.32
218 219 6.430000 GTGTGTGTTCCTACTGGACATTAATT 59.570 38.462 0.00 0.00 43.06 1.40
219 220 5.938125 GTGTGTGTTCCTACTGGACATTAAT 59.062 40.000 0.00 0.00 43.06 1.40
220 221 5.163290 TGTGTGTGTTCCTACTGGACATTAA 60.163 40.000 0.00 0.00 43.06 1.40
221 222 4.345547 TGTGTGTGTTCCTACTGGACATTA 59.654 41.667 0.00 0.00 43.06 1.90
222 223 3.135712 TGTGTGTGTTCCTACTGGACATT 59.864 43.478 0.00 0.00 43.06 2.71
223 224 2.703536 TGTGTGTGTTCCTACTGGACAT 59.296 45.455 0.00 0.00 43.06 3.06
224 225 2.112190 TGTGTGTGTTCCTACTGGACA 58.888 47.619 0.00 0.00 43.06 4.02
225 226 2.902705 TGTGTGTGTTCCTACTGGAC 57.097 50.000 0.00 0.00 43.06 4.02
226 227 3.244422 GGATTGTGTGTGTTCCTACTGGA 60.244 47.826 0.00 0.00 41.36 3.86
227 228 3.074412 GGATTGTGTGTGTTCCTACTGG 58.926 50.000 0.00 0.00 0.00 4.00
228 229 4.008074 AGGATTGTGTGTGTTCCTACTG 57.992 45.455 0.00 0.00 36.83 2.74
229 230 5.483937 TGATAGGATTGTGTGTGTTCCTACT 59.516 40.000 0.00 0.00 42.16 2.57
230 231 5.730550 TGATAGGATTGTGTGTGTTCCTAC 58.269 41.667 0.00 0.00 42.16 3.18
231 232 6.560003 ATGATAGGATTGTGTGTGTTCCTA 57.440 37.500 0.37 0.37 43.19 2.94
232 233 4.908601 TGATAGGATTGTGTGTGTTCCT 57.091 40.909 0.00 0.00 41.43 3.36
233 234 6.515272 AAATGATAGGATTGTGTGTGTTCC 57.485 37.500 0.00 0.00 0.00 3.62
234 235 9.559958 CTTAAAATGATAGGATTGTGTGTGTTC 57.440 33.333 0.00 0.00 0.00 3.18
235 236 8.522830 CCTTAAAATGATAGGATTGTGTGTGTT 58.477 33.333 0.00 0.00 0.00 3.32
236 237 7.888021 TCCTTAAAATGATAGGATTGTGTGTGT 59.112 33.333 0.00 0.00 33.23 3.72
237 238 8.279970 TCCTTAAAATGATAGGATTGTGTGTG 57.720 34.615 0.00 0.00 33.23 3.82
238 239 8.877864 TTCCTTAAAATGATAGGATTGTGTGT 57.122 30.769 0.00 0.00 37.87 3.72
296 297 8.023021 ACCACATGATAGTATACAAGACATGT 57.977 34.615 20.97 20.97 44.51 3.21
297 298 9.411801 GTACCACATGATAGTATACAAGACATG 57.588 37.037 20.14 20.14 39.27 3.21
298 299 9.368416 AGTACCACATGATAGTATACAAGACAT 57.632 33.333 5.50 2.83 0.00 3.06
299 300 8.762481 AGTACCACATGATAGTATACAAGACA 57.238 34.615 5.50 0.53 0.00 3.41
367 368 9.942850 TCATGTAACTCACTTTGAATCATCTTA 57.057 29.630 0.00 0.00 0.00 2.10
368 369 8.853077 TCATGTAACTCACTTTGAATCATCTT 57.147 30.769 0.00 0.00 0.00 2.40
369 370 8.853077 TTCATGTAACTCACTTTGAATCATCT 57.147 30.769 0.00 0.00 30.18 2.90
370 371 9.897744 TTTTCATGTAACTCACTTTGAATCATC 57.102 29.630 0.00 0.00 33.16 2.92
376 377 8.816144 GCAAAATTTTCATGTAACTCACTTTGA 58.184 29.630 0.00 0.00 0.00 2.69
377 378 8.602328 TGCAAAATTTTCATGTAACTCACTTTG 58.398 29.630 0.00 0.00 0.00 2.77
378 379 8.715191 TGCAAAATTTTCATGTAACTCACTTT 57.285 26.923 0.00 0.00 0.00 2.66
379 380 8.715191 TTGCAAAATTTTCATGTAACTCACTT 57.285 26.923 0.00 0.00 0.00 3.16
380 381 8.196771 TCTTGCAAAATTTTCATGTAACTCACT 58.803 29.630 0.00 0.00 0.00 3.41
381 382 8.351495 TCTTGCAAAATTTTCATGTAACTCAC 57.649 30.769 0.00 0.00 0.00 3.51
396 397 9.982651 ACGTATGTAGTATCTATCTTGCAAAAT 57.017 29.630 0.00 0.00 0.00 1.82
397 398 9.459640 GACGTATGTAGTATCTATCTTGCAAAA 57.540 33.333 0.00 0.00 0.00 2.44
398 399 8.626526 TGACGTATGTAGTATCTATCTTGCAAA 58.373 33.333 0.00 0.00 0.00 3.68
399 400 8.161699 TGACGTATGTAGTATCTATCTTGCAA 57.838 34.615 0.00 0.00 0.00 4.08
400 401 7.739498 TGACGTATGTAGTATCTATCTTGCA 57.261 36.000 0.00 0.00 0.00 4.08
401 402 9.705471 GTATGACGTATGTAGTATCTATCTTGC 57.295 37.037 0.00 0.00 0.00 4.01
408 409 9.947669 GAGTTTTGTATGACGTATGTAGTATCT 57.052 33.333 0.00 0.00 0.00 1.98
409 410 9.726232 TGAGTTTTGTATGACGTATGTAGTATC 57.274 33.333 0.00 0.00 0.00 2.24
411 412 9.563898 CTTGAGTTTTGTATGACGTATGTAGTA 57.436 33.333 0.00 0.00 0.00 1.82
412 413 8.086522 ACTTGAGTTTTGTATGACGTATGTAGT 58.913 33.333 0.00 0.00 0.00 2.73
413 414 8.373256 CACTTGAGTTTTGTATGACGTATGTAG 58.627 37.037 0.00 0.00 0.00 2.74
414 415 7.329962 CCACTTGAGTTTTGTATGACGTATGTA 59.670 37.037 0.00 0.00 0.00 2.29
415 416 6.147164 CCACTTGAGTTTTGTATGACGTATGT 59.853 38.462 0.00 0.00 0.00 2.29
416 417 6.147164 ACCACTTGAGTTTTGTATGACGTATG 59.853 38.462 0.00 0.00 0.00 2.39
417 418 6.147164 CACCACTTGAGTTTTGTATGACGTAT 59.853 38.462 0.00 0.00 0.00 3.06
418 419 5.464057 CACCACTTGAGTTTTGTATGACGTA 59.536 40.000 0.00 0.00 0.00 3.57
419 420 4.272504 CACCACTTGAGTTTTGTATGACGT 59.727 41.667 0.00 0.00 0.00 4.34
420 421 4.509970 TCACCACTTGAGTTTTGTATGACG 59.490 41.667 0.00 0.00 0.00 4.35
421 422 6.560253 ATCACCACTTGAGTTTTGTATGAC 57.440 37.500 0.00 0.00 37.77 3.06
422 423 7.936847 AGTTATCACCACTTGAGTTTTGTATGA 59.063 33.333 0.00 0.00 37.77 2.15
423 424 8.099364 AGTTATCACCACTTGAGTTTTGTATG 57.901 34.615 0.00 0.00 37.77 2.39
424 425 9.959721 ATAGTTATCACCACTTGAGTTTTGTAT 57.040 29.630 0.00 0.00 37.77 2.29
425 426 9.431887 GATAGTTATCACCACTTGAGTTTTGTA 57.568 33.333 0.00 0.00 37.77 2.41
426 427 7.936847 TGATAGTTATCACCACTTGAGTTTTGT 59.063 33.333 0.00 0.00 37.76 2.83
427 428 8.322906 TGATAGTTATCACCACTTGAGTTTTG 57.677 34.615 0.00 0.00 37.76 2.44
449 450 9.474313 ACACAAATTTTATATACCACCAGTGAT 57.526 29.630 0.00 0.00 0.00 3.06
450 451 8.735315 CACACAAATTTTATATACCACCAGTGA 58.265 33.333 0.00 0.00 0.00 3.41
451 452 8.519526 ACACACAAATTTTATATACCACCAGTG 58.480 33.333 0.00 0.00 0.00 3.66
452 453 8.519526 CACACACAAATTTTATATACCACCAGT 58.480 33.333 0.00 0.00 0.00 4.00
453 454 8.519526 ACACACACAAATTTTATATACCACCAG 58.480 33.333 0.00 0.00 0.00 4.00
454 455 8.410673 ACACACACAAATTTTATATACCACCA 57.589 30.769 0.00 0.00 0.00 4.17
455 456 8.736244 AGACACACACAAATTTTATATACCACC 58.264 33.333 0.00 0.00 0.00 4.61
456 457 9.769093 GAGACACACACAAATTTTATATACCAC 57.231 33.333 0.00 0.00 0.00 4.16
457 458 9.733556 AGAGACACACACAAATTTTATATACCA 57.266 29.630 0.00 0.00 0.00 3.25
518 519 8.317679 GCAACCCATCTAGATTTGTCTATATCT 58.682 37.037 14.27 0.00 35.41 1.98
519 520 8.097038 TGCAACCCATCTAGATTTGTCTATATC 58.903 37.037 14.27 1.14 0.00 1.63
520 521 7.977818 TGCAACCCATCTAGATTTGTCTATAT 58.022 34.615 14.27 0.00 0.00 0.86
521 522 7.373617 TGCAACCCATCTAGATTTGTCTATA 57.626 36.000 14.27 0.00 0.00 1.31
522 523 6.252599 TGCAACCCATCTAGATTTGTCTAT 57.747 37.500 14.27 0.00 0.00 1.98
523 524 5.692115 TGCAACCCATCTAGATTTGTCTA 57.308 39.130 14.27 3.01 0.00 2.59
524 525 4.574674 TGCAACCCATCTAGATTTGTCT 57.425 40.909 14.27 0.00 0.00 3.41
552 559 7.967890 TTGTAGATCTATGTGCATATGTTGG 57.032 36.000 5.57 0.00 0.00 3.77
563 570 7.491372 CACGTTTACCACATTGTAGATCTATGT 59.509 37.037 5.57 4.74 41.59 2.29
575 582 1.577421 GCCGCACGTTTACCACATT 59.423 52.632 0.00 0.00 0.00 2.71
580 591 0.671472 AACTAGGCCGCACGTTTACC 60.671 55.000 0.00 0.00 0.00 2.85
584 595 0.319405 AACTAACTAGGCCGCACGTT 59.681 50.000 0.00 2.06 0.00 3.99
586 597 0.997196 GAAACTAACTAGGCCGCACG 59.003 55.000 0.00 0.00 0.00 5.34
590 601 2.007608 GGCAAGAAACTAACTAGGCCG 58.992 52.381 0.00 0.00 31.77 6.13
595 606 5.242838 CCCAAATGTGGCAAGAAACTAACTA 59.757 40.000 0.00 0.00 44.46 2.24
596 607 4.039124 CCCAAATGTGGCAAGAAACTAACT 59.961 41.667 0.00 0.00 44.46 2.24
597 608 4.306600 CCCAAATGTGGCAAGAAACTAAC 58.693 43.478 0.00 0.00 44.46 2.34
598 609 4.599047 CCCAAATGTGGCAAGAAACTAA 57.401 40.909 0.00 0.00 44.46 2.24
663 674 9.223099 TGAGAATCCAACTATATAATGTGCATG 57.777 33.333 0.00 0.00 0.00 4.06
664 675 9.970553 ATGAGAATCCAACTATATAATGTGCAT 57.029 29.630 0.00 0.00 0.00 3.96
665 676 9.797642 AATGAGAATCCAACTATATAATGTGCA 57.202 29.630 0.00 0.00 0.00 4.57
710 730 4.142600 GCGGGGATATGCAGATTTGAATAC 60.143 45.833 0.00 0.00 27.33 1.89
927 1289 3.371917 GGATGTGAGAATCCATGGGACAA 60.372 47.826 13.02 0.00 44.85 3.18
929 1291 2.487986 GGGATGTGAGAATCCATGGGAC 60.488 54.545 13.02 3.76 46.94 4.46
932 1294 3.074094 AGATGGGATGTGAGAATCCATGG 59.926 47.826 4.97 4.97 46.94 3.66
934 1296 3.330110 GGAGATGGGATGTGAGAATCCAT 59.670 47.826 5.63 0.00 46.94 3.41
937 1299 3.903090 AGAGGAGATGGGATGTGAGAATC 59.097 47.826 0.00 0.00 0.00 2.52
955 1317 1.008329 GGACGACGTACAGAGAGAGG 58.992 60.000 5.03 0.00 0.00 3.69
1263 1646 4.437587 GACAGCCCATGCAGCCCT 62.438 66.667 0.00 0.00 41.13 5.19
1388 1771 1.745115 CACACACATACCTGGCCGG 60.745 63.158 3.88 3.88 39.35 6.13
1475 2560 9.801873 ATTATAACCACACTGTTGCATTAATTC 57.198 29.630 0.00 0.00 0.00 2.17
1480 2565 8.900983 AAAAATTATAACCACACTGTTGCATT 57.099 26.923 0.00 0.00 0.00 3.56
1512 2601 2.431771 CGTCGCATCGGTGGTTGA 60.432 61.111 0.00 0.00 0.00 3.18
1513 2602 4.147322 GCGTCGCATCGGTGGTTG 62.147 66.667 13.44 0.00 0.00 3.77
1515 2604 4.796231 GAGCGTCGCATCGGTGGT 62.796 66.667 21.09 0.00 41.54 4.16
1519 2608 2.983761 ATACACGAGCGTCGCATCGG 62.984 60.000 29.12 22.78 45.12 4.18
1520 2609 1.589154 GATACACGAGCGTCGCATCG 61.589 60.000 26.34 26.34 45.12 3.84
1521 2610 1.589154 CGATACACGAGCGTCGCATC 61.589 60.000 21.09 11.13 45.12 3.91
1524 2613 3.017314 CCGATACACGAGCGTCGC 61.017 66.667 9.80 9.80 45.12 5.19
1531 4665 0.179076 TAGACGCTCCCGATACACGA 60.179 55.000 0.00 0.00 45.77 4.35
1570 4704 9.750125 CACAATAGCTATATGTAAGTTGACTGA 57.250 33.333 6.68 0.00 0.00 3.41
1571 4705 9.750125 TCACAATAGCTATATGTAAGTTGACTG 57.250 33.333 6.68 0.00 0.00 3.51
1573 4707 9.529325 TGTCACAATAGCTATATGTAAGTTGAC 57.471 33.333 6.68 14.57 0.00 3.18
1577 4711 7.604164 GCCATGTCACAATAGCTATATGTAAGT 59.396 37.037 6.68 0.00 0.00 2.24
1580 4714 7.003402 TGCCATGTCACAATAGCTATATGTA 57.997 36.000 6.68 3.93 0.00 2.29
1585 4719 4.722220 ACATGCCATGTCACAATAGCTAT 58.278 39.130 4.03 0.00 39.92 2.97
1588 4722 3.251729 CCTACATGCCATGTCACAATAGC 59.748 47.826 14.74 0.00 43.67 2.97
1591 4725 2.026641 GCCTACATGCCATGTCACAAT 58.973 47.619 14.74 0.00 43.67 2.71
1593 4727 0.744057 CGCCTACATGCCATGTCACA 60.744 55.000 14.74 0.00 43.67 3.58
1873 5079 0.788391 CCCTCGCGTTGAAGTTGTAC 59.212 55.000 5.77 0.00 0.00 2.90
2494 6771 0.809385 CGAAGTAGTTGCCGAGGAGA 59.191 55.000 0.00 0.00 0.00 3.71
3520 7895 3.434940 AAGGGAAGTTAATTCAGGCGT 57.565 42.857 0.00 0.00 39.91 5.68
3521 7896 4.514401 ACTAAGGGAAGTTAATTCAGGCG 58.486 43.478 0.00 0.00 39.91 5.52
3522 7897 8.521170 AATAACTAAGGGAAGTTAATTCAGGC 57.479 34.615 0.99 0.00 43.30 4.85
3549 7927 0.320946 CCCCGCCGAAAACAGACTAA 60.321 55.000 0.00 0.00 0.00 2.24
3551 7929 2.032071 CCCCGCCGAAAACAGACT 59.968 61.111 0.00 0.00 0.00 3.24
3552 7930 2.453379 TACCCCCGCCGAAAACAGAC 62.453 60.000 0.00 0.00 0.00 3.51
3553 7931 1.766625 TTACCCCCGCCGAAAACAGA 61.767 55.000 0.00 0.00 0.00 3.41
3554 7932 0.890090 TTTACCCCCGCCGAAAACAG 60.890 55.000 0.00 0.00 0.00 3.16
3556 7934 0.241749 CTTTTACCCCCGCCGAAAAC 59.758 55.000 0.00 0.00 0.00 2.43
3559 7937 0.393267 CATCTTTTACCCCCGCCGAA 60.393 55.000 0.00 0.00 0.00 4.30
3560 7938 1.222387 CATCTTTTACCCCCGCCGA 59.778 57.895 0.00 0.00 0.00 5.54
3561 7939 0.393267 TTCATCTTTTACCCCCGCCG 60.393 55.000 0.00 0.00 0.00 6.46
3608 7988 4.377897 CTCGAGGCTCCGGTTAATTAATT 58.622 43.478 9.32 5.89 0.00 1.40
3609 7989 3.244112 CCTCGAGGCTCCGGTTAATTAAT 60.244 47.826 20.67 0.00 0.00 1.40
3610 7990 2.101917 CCTCGAGGCTCCGGTTAATTAA 59.898 50.000 20.67 0.00 0.00 1.40
3611 7991 1.684983 CCTCGAGGCTCCGGTTAATTA 59.315 52.381 20.67 0.00 0.00 1.40
3622 8002 1.490574 ACAATTAGCTCCTCGAGGCT 58.509 50.000 27.39 22.24 41.92 4.58
3630 8010 2.819608 TGTTGCTGGAACAATTAGCTCC 59.180 45.455 12.50 0.00 41.80 4.70
3797 8183 0.175531 ATTAAACATGCGCCCCTTGC 59.824 50.000 4.18 0.00 0.00 4.01
3820 8213 3.840124 GCTACCTTAGCCTATGTTGGT 57.160 47.619 0.00 0.00 45.95 3.67
3893 8287 3.694566 TCTTAGCGCTCATGTTAGAGTCA 59.305 43.478 16.34 0.00 37.94 3.41
3904 8298 3.243771 GGCCTTAGTTATCTTAGCGCTCA 60.244 47.826 16.34 0.30 0.00 4.26
3961 8355 5.771153 TTTCAACATCAAGCATCTTCACA 57.229 34.783 0.00 0.00 0.00 3.58
3977 8371 1.203287 GAGGCAGGCATCCTTTTCAAC 59.797 52.381 0.00 0.00 33.24 3.18
3982 8376 2.273449 CGGAGGCAGGCATCCTTT 59.727 61.111 21.04 0.00 43.95 3.11
3999 8393 1.478916 GAAGAGGTAGGACAGTGAGGC 59.521 57.143 0.00 0.00 0.00 4.70
4073 8473 0.185901 AACCATTCCATCCCATCCGG 59.814 55.000 0.00 0.00 0.00 5.14
4074 8474 1.609208 GAACCATTCCATCCCATCCG 58.391 55.000 0.00 0.00 0.00 4.18
4102 8502 3.181463 TGGCCTACTCGTAACAAACTTGT 60.181 43.478 3.32 0.00 44.72 3.16
4103 8503 3.395639 TGGCCTACTCGTAACAAACTTG 58.604 45.455 3.32 0.00 0.00 3.16
4122 8522 0.947244 CTTTAGCTTGGGCGCTATGG 59.053 55.000 7.64 0.00 41.71 2.74
4147 8547 3.439857 TGCCTAGCTTGGAGAACATTT 57.560 42.857 19.07 0.00 0.00 2.32
4149 8549 3.245052 ACTTTGCCTAGCTTGGAGAACAT 60.245 43.478 19.07 0.00 0.00 2.71
4150 8550 2.106511 ACTTTGCCTAGCTTGGAGAACA 59.893 45.455 19.07 3.22 0.00 3.18
4182 8582 1.371635 GCGCCGTTCAACAATGCTT 60.372 52.632 0.00 0.00 0.00 3.91
4186 8586 0.665835 TTCTTGCGCCGTTCAACAAT 59.334 45.000 4.18 0.00 0.00 2.71
4189 8589 0.517316 AGATTCTTGCGCCGTTCAAC 59.483 50.000 4.18 0.00 0.00 3.18
4194 8594 0.818296 AGTAGAGATTCTTGCGCCGT 59.182 50.000 4.18 0.00 0.00 5.68
4195 8595 2.776312 TAGTAGAGATTCTTGCGCCG 57.224 50.000 4.18 0.00 0.00 6.46
4240 8640 7.815641 TGTGGAGTTATGTACATGATTGTTTG 58.184 34.615 18.81 0.00 37.28 2.93
4246 8646 9.466497 AAATTCTTGTGGAGTTATGTACATGAT 57.534 29.630 18.81 3.86 30.57 2.45
4249 8649 8.028938 GCAAAATTCTTGTGGAGTTATGTACAT 58.971 33.333 13.93 13.93 0.00 2.29
4256 8656 6.707440 TCTTGCAAAATTCTTGTGGAGTTA 57.293 33.333 0.00 0.00 0.00 2.24
4282 8682 3.243839 GCCAACCACATTCTGTTCAATGT 60.244 43.478 0.00 0.00 46.00 2.71
4298 8699 2.561373 CTCCGAAAAGCGCCAACC 59.439 61.111 2.29 0.00 39.11 3.77
4311 8712 1.009829 GTGCTTTATGTGGAGCTCCG 58.990 55.000 27.43 12.44 39.60 4.63
4336 8737 4.308526 TGTTATATGGTCTGGGCAACAA 57.691 40.909 0.00 0.00 39.74 2.83
4341 8742 6.463995 TCAAAAATGTTATATGGTCTGGGC 57.536 37.500 0.00 0.00 0.00 5.36
4353 8754 9.834628 CTTCGCTATTAACCTTCAAAAATGTTA 57.165 29.630 0.00 0.00 0.00 2.41
4354 8755 7.812669 CCTTCGCTATTAACCTTCAAAAATGTT 59.187 33.333 0.00 0.00 0.00 2.71
4355 8756 7.312899 CCTTCGCTATTAACCTTCAAAAATGT 58.687 34.615 0.00 0.00 0.00 2.71
4356 8757 6.253512 GCCTTCGCTATTAACCTTCAAAAATG 59.746 38.462 0.00 0.00 0.00 2.32
4357 8758 6.330278 GCCTTCGCTATTAACCTTCAAAAAT 58.670 36.000 0.00 0.00 0.00 1.82
4391 8792 6.696583 TCATATTCATTTGGTAAGCGCAAATG 59.303 34.615 18.87 18.87 40.50 2.32
4392 8793 6.804677 TCATATTCATTTGGTAAGCGCAAAT 58.195 32.000 11.47 3.12 0.00 2.32
4393 8794 6.201226 TCATATTCATTTGGTAAGCGCAAA 57.799 33.333 11.47 0.18 0.00 3.68
4394 8795 5.826601 TCATATTCATTTGGTAAGCGCAA 57.173 34.783 11.47 0.00 0.00 4.85
4395 8796 5.826601 TTCATATTCATTTGGTAAGCGCA 57.173 34.783 11.47 0.00 0.00 6.09
4396 8797 6.197096 CACTTTCATATTCATTTGGTAAGCGC 59.803 38.462 0.00 0.00 0.00 5.92
4397 8798 7.471721 TCACTTTCATATTCATTTGGTAAGCG 58.528 34.615 0.00 0.00 0.00 4.68
4410 8811 9.801873 CGTTTTGGGATTTATCACTTTCATATT 57.198 29.630 0.00 0.00 0.00 1.28
4411 8812 8.966868 ACGTTTTGGGATTTATCACTTTCATAT 58.033 29.630 0.00 0.00 0.00 1.78
4412 8813 8.343168 ACGTTTTGGGATTTATCACTTTCATA 57.657 30.769 0.00 0.00 0.00 2.15
4413 8814 7.227049 ACGTTTTGGGATTTATCACTTTCAT 57.773 32.000 0.00 0.00 0.00 2.57
4414 8815 6.642707 ACGTTTTGGGATTTATCACTTTCA 57.357 33.333 0.00 0.00 0.00 2.69
4415 8816 6.304683 CGAACGTTTTGGGATTTATCACTTTC 59.695 38.462 0.46 0.00 0.00 2.62
4416 8817 6.146898 CGAACGTTTTGGGATTTATCACTTT 58.853 36.000 0.46 0.00 0.00 2.66
4417 8818 5.335348 CCGAACGTTTTGGGATTTATCACTT 60.335 40.000 0.46 0.00 32.31 3.16
4418 8819 4.155280 CCGAACGTTTTGGGATTTATCACT 59.845 41.667 0.46 0.00 32.31 3.41
4419 8820 4.154556 TCCGAACGTTTTGGGATTTATCAC 59.845 41.667 17.37 0.00 34.84 3.06
4420 8821 4.325119 TCCGAACGTTTTGGGATTTATCA 58.675 39.130 17.37 0.00 34.84 2.15
4421 8822 4.950434 TCCGAACGTTTTGGGATTTATC 57.050 40.909 17.37 0.00 34.84 1.75
4422 8823 5.907866 ATTCCGAACGTTTTGGGATTTAT 57.092 34.783 17.37 7.08 39.20 1.40
4423 8824 5.708877 AATTCCGAACGTTTTGGGATTTA 57.291 34.783 17.07 5.61 39.02 1.40
4424 8825 4.594123 AATTCCGAACGTTTTGGGATTT 57.406 36.364 17.07 15.21 39.02 2.17
4425 8826 4.594123 AAATTCCGAACGTTTTGGGATT 57.406 36.364 17.07 17.07 43.15 3.01
4426 8827 4.157105 CCTAAATTCCGAACGTTTTGGGAT 59.843 41.667 17.37 12.96 39.20 3.85
4427 8828 3.502979 CCTAAATTCCGAACGTTTTGGGA 59.497 43.478 17.37 14.36 37.81 4.37
4428 8829 3.828786 CCTAAATTCCGAACGTTTTGGG 58.171 45.455 17.37 12.55 34.75 4.12
4429 8830 3.239254 GCCTAAATTCCGAACGTTTTGG 58.761 45.455 12.86 12.86 35.37 3.28
4430 8831 3.891324 TGCCTAAATTCCGAACGTTTTG 58.109 40.909 0.46 0.00 0.00 2.44
4431 8832 4.481463 CATGCCTAAATTCCGAACGTTTT 58.519 39.130 0.46 0.00 0.00 2.43
4432 8833 3.119637 CCATGCCTAAATTCCGAACGTTT 60.120 43.478 0.46 0.00 0.00 3.60
4433 8834 2.422127 CCATGCCTAAATTCCGAACGTT 59.578 45.455 0.00 0.00 0.00 3.99
4434 8835 2.014128 CCATGCCTAAATTCCGAACGT 58.986 47.619 0.00 0.00 0.00 3.99
4435 8836 1.268539 GCCATGCCTAAATTCCGAACG 60.269 52.381 0.00 0.00 0.00 3.95
4436 8837 1.748493 TGCCATGCCTAAATTCCGAAC 59.252 47.619 0.00 0.00 0.00 3.95
4437 8838 2.136298 TGCCATGCCTAAATTCCGAA 57.864 45.000 0.00 0.00 0.00 4.30
4438 8839 2.136298 TTGCCATGCCTAAATTCCGA 57.864 45.000 0.00 0.00 0.00 4.55
4439 8840 2.288395 GGATTGCCATGCCTAAATTCCG 60.288 50.000 0.00 0.00 0.00 4.30
4440 8841 2.288395 CGGATTGCCATGCCTAAATTCC 60.288 50.000 0.00 0.00 0.00 3.01
4441 8842 2.622942 TCGGATTGCCATGCCTAAATTC 59.377 45.455 0.00 0.00 0.00 2.17
4442 8843 2.665165 TCGGATTGCCATGCCTAAATT 58.335 42.857 0.00 0.00 0.00 1.82
4443 8844 2.363306 TCGGATTGCCATGCCTAAAT 57.637 45.000 0.00 0.00 0.00 1.40
4444 8845 2.136298 TTCGGATTGCCATGCCTAAA 57.864 45.000 0.00 0.00 0.00 1.85
4445 8846 1.955778 CATTCGGATTGCCATGCCTAA 59.044 47.619 0.00 0.00 0.00 2.69
4446 8847 1.133823 ACATTCGGATTGCCATGCCTA 60.134 47.619 0.04 0.00 0.00 3.93
4447 8848 0.396139 ACATTCGGATTGCCATGCCT 60.396 50.000 0.04 0.00 0.00 4.75
4448 8849 0.461135 AACATTCGGATTGCCATGCC 59.539 50.000 0.04 0.00 0.00 4.40
4449 8850 2.298411 AAACATTCGGATTGCCATGC 57.702 45.000 0.04 0.00 0.00 4.06
4450 8851 4.244066 TGAAAAACATTCGGATTGCCATG 58.756 39.130 0.04 0.00 0.00 3.66
4451 8852 4.533919 TGAAAAACATTCGGATTGCCAT 57.466 36.364 0.04 0.00 0.00 4.40
4452 8853 4.244066 CATGAAAAACATTCGGATTGCCA 58.756 39.130 0.04 0.00 37.07 4.92
4453 8854 3.618150 CCATGAAAAACATTCGGATTGCC 59.382 43.478 0.00 0.00 37.07 4.52
4454 8855 3.062504 GCCATGAAAAACATTCGGATTGC 59.937 43.478 0.00 0.00 37.07 3.56
4455 8856 4.244066 TGCCATGAAAAACATTCGGATTG 58.756 39.130 0.00 0.00 37.07 2.67
4456 8857 4.533919 TGCCATGAAAAACATTCGGATT 57.466 36.364 0.00 0.00 37.07 3.01
4457 8858 4.021192 AGTTGCCATGAAAAACATTCGGAT 60.021 37.500 0.00 0.00 37.07 4.18
4458 8859 3.320541 AGTTGCCATGAAAAACATTCGGA 59.679 39.130 0.00 0.00 37.07 4.55
4459 8860 3.652274 AGTTGCCATGAAAAACATTCGG 58.348 40.909 0.00 0.00 37.07 4.30
4460 8861 5.655893 AAAGTTGCCATGAAAAACATTCG 57.344 34.783 0.00 0.00 37.07 3.34
4461 8862 6.784176 ACAAAAGTTGCCATGAAAAACATTC 58.216 32.000 0.00 0.00 37.07 2.67
4462 8863 6.756299 ACAAAAGTTGCCATGAAAAACATT 57.244 29.167 0.00 0.00 37.07 2.71
4463 8864 6.373774 TGAACAAAAGTTGCCATGAAAAACAT 59.626 30.769 0.00 0.00 40.17 2.71
4464 8865 5.702670 TGAACAAAAGTTGCCATGAAAAACA 59.297 32.000 0.00 0.00 0.00 2.83
4465 8866 6.020984 GTGAACAAAAGTTGCCATGAAAAAC 58.979 36.000 0.00 0.00 0.00 2.43
4466 8867 5.163913 CGTGAACAAAAGTTGCCATGAAAAA 60.164 36.000 0.00 0.00 0.00 1.94
4467 8868 4.328440 CGTGAACAAAAGTTGCCATGAAAA 59.672 37.500 0.00 0.00 0.00 2.29
4468 8869 3.862267 CGTGAACAAAAGTTGCCATGAAA 59.138 39.130 0.00 0.00 0.00 2.69
4469 8870 3.443037 CGTGAACAAAAGTTGCCATGAA 58.557 40.909 0.00 0.00 0.00 2.57
4470 8871 2.797792 GCGTGAACAAAAGTTGCCATGA 60.798 45.455 0.00 0.00 0.00 3.07
4471 8872 1.522258 GCGTGAACAAAAGTTGCCATG 59.478 47.619 0.00 0.00 0.00 3.66
4472 8873 1.851658 GCGTGAACAAAAGTTGCCAT 58.148 45.000 0.00 0.00 0.00 4.40
4473 8874 0.524392 CGCGTGAACAAAAGTTGCCA 60.524 50.000 0.00 0.00 0.00 4.92
4474 8875 0.248296 TCGCGTGAACAAAAGTTGCC 60.248 50.000 5.77 0.00 0.00 4.52
4475 8876 1.112459 CTCGCGTGAACAAAAGTTGC 58.888 50.000 5.77 0.00 0.00 4.17
4476 8877 1.063469 ACCTCGCGTGAACAAAAGTTG 59.937 47.619 10.21 0.00 0.00 3.16
4477 8878 1.375551 ACCTCGCGTGAACAAAAGTT 58.624 45.000 10.21 0.00 0.00 2.66
4478 8879 1.063469 CAACCTCGCGTGAACAAAAGT 59.937 47.619 10.21 0.00 0.00 2.66
4479 8880 1.329292 TCAACCTCGCGTGAACAAAAG 59.671 47.619 10.21 0.00 0.00 2.27
4480 8881 1.062880 GTCAACCTCGCGTGAACAAAA 59.937 47.619 10.21 0.00 0.00 2.44
4481 8882 0.653636 GTCAACCTCGCGTGAACAAA 59.346 50.000 10.21 0.00 0.00 2.83
4482 8883 0.460459 TGTCAACCTCGCGTGAACAA 60.460 50.000 10.21 0.00 0.00 2.83
4483 8884 0.460459 TTGTCAACCTCGCGTGAACA 60.460 50.000 10.21 5.76 0.00 3.18
4484 8885 0.653636 TTTGTCAACCTCGCGTGAAC 59.346 50.000 10.21 3.26 0.00 3.18
4485 8886 0.653636 GTTTGTCAACCTCGCGTGAA 59.346 50.000 10.21 0.00 0.00 3.18
4486 8887 0.460459 TGTTTGTCAACCTCGCGTGA 60.460 50.000 10.21 0.68 31.02 4.35
4487 8888 0.315869 GTGTTTGTCAACCTCGCGTG 60.316 55.000 5.77 2.75 31.02 5.34
4488 8889 1.758319 CGTGTTTGTCAACCTCGCGT 61.758 55.000 5.77 0.00 31.02 6.01
4489 8890 1.083657 CGTGTTTGTCAACCTCGCG 60.084 57.895 0.00 0.00 31.02 5.87
4490 8891 0.042448 GTCGTGTTTGTCAACCTCGC 60.042 55.000 0.30 0.00 32.70 5.03
4491 8892 1.282817 TGTCGTGTTTGTCAACCTCG 58.717 50.000 0.00 0.00 33.42 4.63
4492 8893 3.963383 ATTGTCGTGTTTGTCAACCTC 57.037 42.857 0.00 0.00 31.02 3.85
4493 8894 4.712122 AAATTGTCGTGTTTGTCAACCT 57.288 36.364 0.00 0.00 31.02 3.50
4494 8895 5.771602 AAAAATTGTCGTGTTTGTCAACC 57.228 34.783 0.00 0.00 31.02 3.77


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.