Multiple sequence alignment - TraesCS4B01G023100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G023100 chr4B 100.000 2426 0 0 1 2426 16878902 16876477 0.000000e+00 4481.0
1 TraesCS4B01G023100 chr4A 88.226 1325 84 40 745 2050 594392366 594393637 0.000000e+00 1517.0
2 TraesCS4B01G023100 chr4A 92.593 135 4 3 233 367 594391473 594391601 3.180000e-44 189.0
3 TraesCS4B01G023100 chr4A 83.333 150 15 8 95 239 594391284 594391428 1.960000e-26 130.0
4 TraesCS4B01G023100 chr4D 87.133 1158 77 40 375 1499 8940678 8939560 0.000000e+00 1247.0
5 TraesCS4B01G023100 chr4D 94.074 135 5 1 233 367 8940882 8940751 4.090000e-48 202.0
6 TraesCS4B01G023100 chr4D 89.506 162 13 2 78 239 8941084 8940927 4.090000e-48 202.0
7 TraesCS4B01G023100 chr4D 81.176 170 12 13 1584 1742 8939455 8939295 4.240000e-23 119.0
8 TraesCS4B01G023100 chr5A 83.898 118 17 2 1130 1246 7472362 7472478 7.090000e-21 111.0
9 TraesCS4B01G023100 chr5B 84.615 104 14 2 1144 1246 9289637 9289739 4.270000e-18 102.0
10 TraesCS4B01G023100 chr6B 94.444 54 2 1 2373 2425 131894171 131894224 5.560000e-12 82.4
11 TraesCS4B01G023100 chr5D 74.026 154 34 5 2049 2198 383349314 383349163 9.370000e-05 58.4
12 TraesCS4B01G023100 chr3B 96.875 32 0 1 655 685 682119514 682119483 4.000000e-03 52.8
13 TraesCS4B01G023100 chr2B 96.875 32 0 1 655 685 677806480 677806511 4.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G023100 chr4B 16876477 16878902 2425 True 4481.0 4481 100.000000 1 2426 1 chr4B.!!$R1 2425
1 TraesCS4B01G023100 chr4A 594391284 594393637 2353 False 612.0 1517 88.050667 95 2050 3 chr4A.!!$F1 1955
2 TraesCS4B01G023100 chr4D 8939295 8941084 1789 True 442.5 1247 87.972250 78 1742 4 chr4D.!!$R1 1664

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
327 378 0.029989 ACCCCATCCCTTCTCCTACC 60.03 60.0 0.0 0.0 0.0 3.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1752 2291 0.029567 CATCGGAGGAGCGAGTGTAC 59.97 60.0 0.0 0.0 0.0 2.9 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 2.456073 TAGGAGAACCTAGGACAGCC 57.544 55.000 17.98 11.31 45.83 4.85
23 24 0.325765 AGGAGAACCTAGGACAGCCC 60.326 60.000 17.98 9.60 45.83 5.19
24 25 0.617820 GGAGAACCTAGGACAGCCCA 60.618 60.000 17.98 0.00 37.41 5.36
25 26 0.537653 GAGAACCTAGGACAGCCCAC 59.462 60.000 17.98 0.00 37.41 4.61
26 27 1.218316 GAACCTAGGACAGCCCACG 59.782 63.158 17.98 0.00 37.41 4.94
27 28 2.854187 GAACCTAGGACAGCCCACGC 62.854 65.000 17.98 0.00 37.41 5.34
28 29 3.390521 CCTAGGACAGCCCACGCA 61.391 66.667 1.05 0.00 37.52 5.24
29 30 2.125512 CTAGGACAGCCCACGCAC 60.126 66.667 0.00 0.00 37.52 5.34
30 31 3.989698 CTAGGACAGCCCACGCACG 62.990 68.421 0.00 0.00 37.52 5.34
49 50 3.257933 GCACGAGGCAAGGTTCAG 58.742 61.111 0.00 0.00 43.97 3.02
50 51 2.328099 GCACGAGGCAAGGTTCAGG 61.328 63.158 0.00 0.00 43.97 3.86
51 52 1.071471 CACGAGGCAAGGTTCAGGT 59.929 57.895 0.00 0.00 0.00 4.00
52 53 0.535102 CACGAGGCAAGGTTCAGGTT 60.535 55.000 0.00 0.00 0.00 3.50
53 54 0.535102 ACGAGGCAAGGTTCAGGTTG 60.535 55.000 0.00 0.00 0.00 3.77
54 55 0.250295 CGAGGCAAGGTTCAGGTTGA 60.250 55.000 0.00 0.00 0.00 3.18
55 56 1.611673 CGAGGCAAGGTTCAGGTTGAT 60.612 52.381 0.00 0.00 0.00 2.57
56 57 2.087646 GAGGCAAGGTTCAGGTTGATC 58.912 52.381 0.00 0.00 0.00 2.92
57 58 1.707427 AGGCAAGGTTCAGGTTGATCT 59.293 47.619 0.00 0.00 0.00 2.75
58 59 2.087646 GGCAAGGTTCAGGTTGATCTC 58.912 52.381 0.00 0.00 0.00 2.75
59 60 2.290577 GGCAAGGTTCAGGTTGATCTCT 60.291 50.000 0.00 0.00 0.00 3.10
60 61 3.006247 GCAAGGTTCAGGTTGATCTCTC 58.994 50.000 0.00 0.00 0.00 3.20
61 62 3.307339 GCAAGGTTCAGGTTGATCTCTCT 60.307 47.826 0.00 0.00 0.00 3.10
62 63 4.805609 GCAAGGTTCAGGTTGATCTCTCTT 60.806 45.833 0.00 0.00 0.00 2.85
63 64 4.550076 AGGTTCAGGTTGATCTCTCTTG 57.450 45.455 0.00 0.00 0.00 3.02
64 65 3.006247 GGTTCAGGTTGATCTCTCTTGC 58.994 50.000 0.00 0.00 0.00 4.01
65 66 3.307339 GGTTCAGGTTGATCTCTCTTGCT 60.307 47.826 0.00 0.00 0.00 3.91
66 67 3.606595 TCAGGTTGATCTCTCTTGCTG 57.393 47.619 0.00 0.00 0.00 4.41
67 68 2.902486 TCAGGTTGATCTCTCTTGCTGT 59.098 45.455 0.00 0.00 0.00 4.40
68 69 3.001414 CAGGTTGATCTCTCTTGCTGTG 58.999 50.000 0.00 0.00 0.00 3.66
69 70 2.636893 AGGTTGATCTCTCTTGCTGTGT 59.363 45.455 0.00 0.00 0.00 3.72
70 71 2.740981 GGTTGATCTCTCTTGCTGTGTG 59.259 50.000 0.00 0.00 0.00 3.82
71 72 3.397482 GTTGATCTCTCTTGCTGTGTGT 58.603 45.455 0.00 0.00 0.00 3.72
72 73 3.758755 TGATCTCTCTTGCTGTGTGTT 57.241 42.857 0.00 0.00 0.00 3.32
73 74 4.077300 TGATCTCTCTTGCTGTGTGTTT 57.923 40.909 0.00 0.00 0.00 2.83
74 75 4.454678 TGATCTCTCTTGCTGTGTGTTTT 58.545 39.130 0.00 0.00 0.00 2.43
75 76 4.883585 TGATCTCTCTTGCTGTGTGTTTTT 59.116 37.500 0.00 0.00 0.00 1.94
109 110 1.813513 CATCCCTGCAGTTTCTCGTT 58.186 50.000 13.81 0.00 0.00 3.85
110 111 1.466167 CATCCCTGCAGTTTCTCGTTG 59.534 52.381 13.81 0.00 0.00 4.10
129 130 4.124238 GTTGCGTGCCCATTAGACTATTA 58.876 43.478 0.00 0.00 0.00 0.98
130 131 3.990092 TGCGTGCCCATTAGACTATTAG 58.010 45.455 0.00 0.00 0.00 1.73
131 132 3.386726 TGCGTGCCCATTAGACTATTAGT 59.613 43.478 0.00 0.00 0.00 2.24
156 157 5.519927 AGTCCAATTCAAAACTTTTTGCTCG 59.480 36.000 9.21 0.00 45.35 5.03
162 163 5.298197 TCAAAACTTTTTGCTCGTACACA 57.702 34.783 9.21 0.00 45.35 3.72
178 180 0.812811 CACATCGATGCTGACCCCTG 60.813 60.000 25.11 9.47 0.00 4.45
184 186 1.303309 GATGCTGACCCCTGAATTCG 58.697 55.000 0.04 0.00 0.00 3.34
205 208 5.806818 TCGGGGAAAATACACATGAAACTA 58.193 37.500 0.00 0.00 0.00 2.24
208 211 7.066525 TCGGGGAAAATACACATGAAACTATTC 59.933 37.037 0.00 0.00 36.04 1.75
295 346 4.497340 CCACACCCGTGACATTATTTATGC 60.497 45.833 0.96 0.00 46.80 3.14
327 378 0.029989 ACCCCATCCCTTCTCCTACC 60.030 60.000 0.00 0.00 0.00 3.18
393 510 7.644551 CGTTTTGCAGTACTGGTAATGTTTTAA 59.355 33.333 23.95 0.00 34.05 1.52
511 636 1.025041 TCCACTCGACGGAGATCATG 58.975 55.000 0.00 0.00 43.27 3.07
541 668 6.542005 ACAATGTGATATTACAAAGGATCGCA 59.458 34.615 4.23 0.00 41.57 5.10
542 669 6.791887 ATGTGATATTACAAAGGATCGCAG 57.208 37.500 4.23 0.00 40.90 5.18
548 675 1.377725 CAAAGGATCGCAGGCCAGT 60.378 57.895 5.01 0.00 0.00 4.00
558 688 1.153208 CAGGCCAGTGATGAGAGGC 60.153 63.158 5.01 0.00 46.28 4.70
571 851 0.755686 GAGAGGCCGAGACCATTGAT 59.244 55.000 0.00 0.00 0.00 2.57
580 860 4.631131 CCGAGACCATTGATTATACTGCA 58.369 43.478 0.00 0.00 0.00 4.41
607 914 1.630148 CTCCCGCAGAGTTAACTTCG 58.370 55.000 10.02 13.04 37.87 3.79
614 921 3.725010 CGCAGAGTTAACTTCGAAATGGC 60.725 47.826 10.02 4.52 0.00 4.40
620 927 1.327303 AACTTCGAAATGGCCAAGCA 58.673 45.000 10.96 0.00 0.00 3.91
637 944 1.802960 AGCATTGACAAGTGCGAAGAG 59.197 47.619 13.39 0.00 45.69 2.85
644 951 4.883083 TGACAAGTGCGAAGAGAATACTT 58.117 39.130 0.00 0.00 32.23 2.24
683 990 1.476652 GGGACGGAGGGAGTACTAGAC 60.477 61.905 0.00 0.00 0.00 2.59
711 1018 7.214467 ACCGAGAGAAAATTATTTTGCTCAA 57.786 32.000 16.79 0.00 46.30 3.02
712 1019 7.657336 ACCGAGAGAAAATTATTTTGCTCAAA 58.343 30.769 16.79 0.00 46.30 2.69
729 1036 4.737352 GCTCAAAGTGTCCAATTTCTTGCA 60.737 41.667 0.00 0.00 0.00 4.08
734 1041 2.036346 GTGTCCAATTTCTTGCAGCCTT 59.964 45.455 0.00 0.00 0.00 4.35
739 1046 3.006110 CCAATTTCTTGCAGCCTTTGAGA 59.994 43.478 0.00 0.00 0.00 3.27
777 1246 6.260936 AGCACATTACCTGTAGCAATTATCAC 59.739 38.462 0.00 0.00 35.91 3.06
780 1249 7.495606 CACATTACCTGTAGCAATTATCACAGA 59.504 37.037 11.92 0.00 40.67 3.41
816 1285 8.268738 GTGCTTGCTTTTTACAAAGTTTATCAG 58.731 33.333 3.45 0.00 41.51 2.90
829 1298 2.230130 TTATCAGGGGCAAAACAGGG 57.770 50.000 0.00 0.00 0.00 4.45
890 1360 2.539476 CATTGGCGCCAATTAAGAACC 58.461 47.619 44.25 8.47 43.32 3.62
891 1361 1.917872 TTGGCGCCAATTAAGAACCT 58.082 45.000 37.30 0.00 0.00 3.50
892 1362 1.917872 TGGCGCCAATTAAGAACCTT 58.082 45.000 30.74 0.00 0.00 3.50
893 1363 1.816224 TGGCGCCAATTAAGAACCTTC 59.184 47.619 30.74 0.00 0.00 3.46
974 1446 1.289160 TCCCTTCCCCTTCATCACAG 58.711 55.000 0.00 0.00 0.00 3.66
1012 1490 1.946156 CTCATCATGGCGACGACGG 60.946 63.158 9.67 0.00 40.15 4.79
1036 1514 2.431771 CGTCAACCACCATCGCGA 60.432 61.111 13.09 13.09 0.00 5.87
1116 1594 2.130395 CCACCGTCATCATCTTCATCG 58.870 52.381 0.00 0.00 0.00 3.84
1323 1801 3.429141 GACGTCGACGAGGGCAGA 61.429 66.667 41.52 0.00 43.02 4.26
1347 1825 1.986757 GAGCAGGAGGAGGTGCAGA 60.987 63.158 0.00 0.00 42.47 4.26
1428 1906 3.859386 GCCACGGTGATCAAATTTGAATC 59.141 43.478 23.91 19.70 41.13 2.52
1446 1927 1.018910 TCATCGATCGACCAACGCTA 58.981 50.000 22.06 0.00 42.26 4.26
1499 1980 6.147864 TGATTCTTAAGCTTTGTTGCAAGT 57.852 33.333 3.20 0.00 34.99 3.16
1500 1981 6.572519 TGATTCTTAAGCTTTGTTGCAAGTT 58.427 32.000 3.20 0.00 34.99 2.66
1502 1983 4.597079 TCTTAAGCTTTGTTGCAAGTTCG 58.403 39.130 3.20 0.00 34.99 3.95
1503 1984 2.939460 AAGCTTTGTTGCAAGTTCGT 57.061 40.000 0.00 0.00 34.99 3.85
1504 1985 2.193306 AGCTTTGTTGCAAGTTCGTG 57.807 45.000 0.00 0.00 34.99 4.35
1505 1986 1.199624 GCTTTGTTGCAAGTTCGTGG 58.800 50.000 0.00 0.00 0.00 4.94
1506 1987 1.199624 CTTTGTTGCAAGTTCGTGGC 58.800 50.000 0.00 0.00 0.00 5.01
1507 1988 0.814457 TTTGTTGCAAGTTCGTGGCT 59.186 45.000 0.00 0.00 0.00 4.75
1508 1989 1.669604 TTGTTGCAAGTTCGTGGCTA 58.330 45.000 0.00 0.00 0.00 3.93
1509 1990 1.225855 TGTTGCAAGTTCGTGGCTAG 58.774 50.000 0.00 0.00 0.00 3.42
1510 1991 1.226746 GTTGCAAGTTCGTGGCTAGT 58.773 50.000 0.00 0.00 0.00 2.57
1511 1992 1.602377 GTTGCAAGTTCGTGGCTAGTT 59.398 47.619 0.00 0.00 0.00 2.24
1512 1993 1.961793 TGCAAGTTCGTGGCTAGTTT 58.038 45.000 0.00 0.00 0.00 2.66
1513 1994 2.294074 TGCAAGTTCGTGGCTAGTTTT 58.706 42.857 0.00 0.00 0.00 2.43
1514 1995 2.032799 TGCAAGTTCGTGGCTAGTTTTG 59.967 45.455 0.00 0.00 0.00 2.44
1515 1996 2.289547 GCAAGTTCGTGGCTAGTTTTGA 59.710 45.455 0.00 0.00 0.00 2.69
1516 1997 3.848554 GCAAGTTCGTGGCTAGTTTTGAC 60.849 47.826 0.00 0.00 0.00 3.18
1517 1998 2.490991 AGTTCGTGGCTAGTTTTGACC 58.509 47.619 0.00 0.00 0.00 4.02
1518 1999 2.158871 AGTTCGTGGCTAGTTTTGACCA 60.159 45.455 0.00 0.00 0.00 4.02
1519 2000 2.812011 GTTCGTGGCTAGTTTTGACCAT 59.188 45.455 0.00 0.00 34.04 3.55
1520 2001 3.965379 TCGTGGCTAGTTTTGACCATA 57.035 42.857 0.00 0.00 34.04 2.74
1521 2002 3.592059 TCGTGGCTAGTTTTGACCATAC 58.408 45.455 0.00 0.00 34.04 2.39
1522 2003 3.007074 TCGTGGCTAGTTTTGACCATACA 59.993 43.478 0.00 0.00 34.04 2.29
1523 2004 3.749088 CGTGGCTAGTTTTGACCATACAA 59.251 43.478 0.00 0.00 34.04 2.41
1524 2005 4.142902 CGTGGCTAGTTTTGACCATACAAG 60.143 45.833 0.00 0.00 34.04 3.16
1525 2006 4.760204 GTGGCTAGTTTTGACCATACAAGT 59.240 41.667 0.00 0.00 34.04 3.16
1526 2007 4.759693 TGGCTAGTTTTGACCATACAAGTG 59.240 41.667 0.00 0.00 0.00 3.16
1527 2008 4.379499 GGCTAGTTTTGACCATACAAGTGC 60.379 45.833 0.00 0.00 0.00 4.40
1528 2009 4.379499 GCTAGTTTTGACCATACAAGTGCC 60.379 45.833 0.00 0.00 0.00 5.01
1529 2010 2.890945 AGTTTTGACCATACAAGTGCCC 59.109 45.455 0.00 0.00 0.00 5.36
1530 2011 1.529226 TTTGACCATACAAGTGCCCG 58.471 50.000 0.00 0.00 0.00 6.13
1531 2012 0.958382 TTGACCATACAAGTGCCCGC 60.958 55.000 0.00 0.00 0.00 6.13
1532 2013 2.045340 ACCATACAAGTGCCCGCC 60.045 61.111 0.00 0.00 0.00 6.13
1548 2029 3.795488 GCCCGCCTAAGTTTGATTAATGC 60.795 47.826 0.00 0.00 0.00 3.56
1594 2121 9.986157 ATTATATAGGCTGTGAAATTCCATCAT 57.014 29.630 0.00 0.00 0.00 2.45
1600 2127 5.126061 GGCTGTGAAATTCCATCATAGTGTT 59.874 40.000 4.83 0.00 38.05 3.32
1608 2137 7.959658 AATTCCATCATAGTGTTCCAAATGA 57.040 32.000 0.00 0.00 33.20 2.57
1613 2142 8.439172 TCCATCATAGTGTTCCAAATGATATGA 58.561 33.333 0.00 0.00 37.04 2.15
1621 2150 9.028284 AGTGTTCCAAATGATATGATTTCAACT 57.972 29.630 14.73 6.21 0.00 3.16
1622 2151 9.079833 GTGTTCCAAATGATATGATTTCAACTG 57.920 33.333 14.73 0.78 0.00 3.16
1623 2152 8.805175 TGTTCCAAATGATATGATTTCAACTGT 58.195 29.630 14.73 0.00 0.00 3.55
1654 2187 8.786898 CAAAAGAAGTGGAGAAGATGTGAAATA 58.213 33.333 0.00 0.00 0.00 1.40
1707 2246 6.106003 TGTTTAAGCTAGCATCGATTCTGAA 58.894 36.000 18.83 0.00 0.00 3.02
1708 2247 6.763135 TGTTTAAGCTAGCATCGATTCTGAAT 59.237 34.615 18.83 1.81 0.00 2.57
1709 2248 7.280876 TGTTTAAGCTAGCATCGATTCTGAATT 59.719 33.333 18.83 0.00 0.00 2.17
1710 2249 7.792374 TTAAGCTAGCATCGATTCTGAATTT 57.208 32.000 18.83 0.00 0.00 1.82
1711 2250 5.921004 AGCTAGCATCGATTCTGAATTTC 57.079 39.130 18.83 0.00 0.00 2.17
1712 2251 5.609423 AGCTAGCATCGATTCTGAATTTCT 58.391 37.500 18.83 1.33 0.00 2.52
1713 2252 5.466058 AGCTAGCATCGATTCTGAATTTCTG 59.534 40.000 18.83 3.98 0.00 3.02
1714 2253 5.464722 GCTAGCATCGATTCTGAATTTCTGA 59.535 40.000 10.63 2.19 0.00 3.27
1752 2291 6.492007 ACTCTGCTTGATGTTTATTGACAG 57.508 37.500 0.00 0.00 32.19 3.51
1754 2293 7.161404 ACTCTGCTTGATGTTTATTGACAGTA 58.839 34.615 0.00 0.00 32.19 2.74
1776 2315 2.587194 CGCTCCTCCGATGCCTTG 60.587 66.667 0.00 0.00 0.00 3.61
1848 2388 2.289444 TGGTACTGGTGCTTAGTGCTTC 60.289 50.000 0.00 0.00 43.37 3.86
1851 2391 1.352352 ACTGGTGCTTAGTGCTTCCAT 59.648 47.619 0.00 0.00 41.96 3.41
1853 2393 2.821969 CTGGTGCTTAGTGCTTCCATTT 59.178 45.455 0.00 0.00 41.96 2.32
1869 2409 7.286087 TGCTTCCATTTAAATAGTGCTGATGAT 59.714 33.333 0.00 0.00 0.00 2.45
1925 2465 0.238289 CGGCGTTGTCTTGCTGAATT 59.762 50.000 0.00 0.00 39.91 2.17
1945 2485 0.391793 GCTGGAGTTCAGGTACAGCC 60.392 60.000 0.00 0.00 46.47 4.85
1954 2494 1.186200 CAGGTACAGCCACTCAGCTA 58.814 55.000 0.00 0.00 42.61 3.32
1955 2495 1.759445 CAGGTACAGCCACTCAGCTAT 59.241 52.381 0.00 0.00 42.61 2.97
1981 2521 1.531602 GCTTTGGCCTGGGTTCAGT 60.532 57.895 3.32 0.00 39.31 3.41
1982 2522 1.527433 GCTTTGGCCTGGGTTCAGTC 61.527 60.000 3.32 0.00 39.31 3.51
1983 2523 1.228124 TTTGGCCTGGGTTCAGTCG 60.228 57.895 3.32 0.00 39.31 4.18
1984 2524 2.690653 TTTGGCCTGGGTTCAGTCGG 62.691 60.000 3.32 0.00 39.31 4.79
1985 2525 3.319198 GGCCTGGGTTCAGTCGGA 61.319 66.667 0.00 0.00 39.31 4.55
1986 2526 2.747686 GCCTGGGTTCAGTCGGAA 59.252 61.111 0.00 0.00 39.31 4.30
1987 2527 1.376037 GCCTGGGTTCAGTCGGAAG 60.376 63.158 0.00 0.00 39.31 3.46
1988 2528 2.058675 CCTGGGTTCAGTCGGAAGT 58.941 57.895 0.00 0.00 39.31 3.01
1989 2529 0.396811 CCTGGGTTCAGTCGGAAGTT 59.603 55.000 0.00 0.00 39.31 2.66
2014 2555 2.476821 CACTCCGTTAAACAGACCGTT 58.523 47.619 0.00 0.00 40.50 4.44
2051 2592 4.553330 GGTTTCTACCACCTGATCTCAA 57.447 45.455 0.00 0.00 44.36 3.02
2052 2593 4.906618 GGTTTCTACCACCTGATCTCAAA 58.093 43.478 0.00 0.00 44.36 2.69
2053 2594 5.313712 GGTTTCTACCACCTGATCTCAAAA 58.686 41.667 0.00 0.00 44.36 2.44
2054 2595 5.412904 GGTTTCTACCACCTGATCTCAAAAG 59.587 44.000 0.00 0.00 44.36 2.27
2055 2596 4.207891 TCTACCACCTGATCTCAAAAGC 57.792 45.455 0.00 0.00 0.00 3.51
2056 2597 3.840666 TCTACCACCTGATCTCAAAAGCT 59.159 43.478 0.00 0.00 0.00 3.74
2057 2598 3.515602 ACCACCTGATCTCAAAAGCTT 57.484 42.857 0.00 0.00 0.00 3.74
2058 2599 3.837355 ACCACCTGATCTCAAAAGCTTT 58.163 40.909 5.69 5.69 0.00 3.51
2059 2600 3.823304 ACCACCTGATCTCAAAAGCTTTC 59.177 43.478 13.10 0.00 0.00 2.62
2060 2601 3.822735 CCACCTGATCTCAAAAGCTTTCA 59.177 43.478 13.10 4.06 0.00 2.69
2061 2602 4.461781 CCACCTGATCTCAAAAGCTTTCAT 59.538 41.667 13.10 2.49 0.00 2.57
2062 2603 5.392811 CCACCTGATCTCAAAAGCTTTCATC 60.393 44.000 13.10 11.75 0.00 2.92
2063 2604 5.182570 CACCTGATCTCAAAAGCTTTCATCA 59.817 40.000 13.10 15.21 0.00 3.07
2064 2605 5.950549 ACCTGATCTCAAAAGCTTTCATCAT 59.049 36.000 13.10 2.86 0.00 2.45
2065 2606 6.127703 ACCTGATCTCAAAAGCTTTCATCATG 60.128 38.462 13.10 15.05 0.00 3.07
2066 2607 6.127703 CCTGATCTCAAAAGCTTTCATCATGT 60.128 38.462 13.10 0.00 0.00 3.21
2067 2608 6.849502 TGATCTCAAAAGCTTTCATCATGTC 58.150 36.000 13.10 6.16 0.00 3.06
2068 2609 5.633830 TCTCAAAAGCTTTCATCATGTCC 57.366 39.130 13.10 0.00 0.00 4.02
2069 2610 5.072055 TCTCAAAAGCTTTCATCATGTCCA 58.928 37.500 13.10 0.00 0.00 4.02
2070 2611 5.535783 TCTCAAAAGCTTTCATCATGTCCAA 59.464 36.000 13.10 0.00 0.00 3.53
2071 2612 5.531634 TCAAAAGCTTTCATCATGTCCAAC 58.468 37.500 13.10 0.00 0.00 3.77
2072 2613 5.302568 TCAAAAGCTTTCATCATGTCCAACT 59.697 36.000 13.10 0.00 0.00 3.16
2073 2614 5.796424 AAAGCTTTCATCATGTCCAACTT 57.204 34.783 5.69 0.00 0.00 2.66
2074 2615 5.382618 AAGCTTTCATCATGTCCAACTTC 57.617 39.130 0.00 0.00 0.00 3.01
2075 2616 4.401022 AGCTTTCATCATGTCCAACTTCA 58.599 39.130 0.00 0.00 0.00 3.02
2076 2617 4.828939 AGCTTTCATCATGTCCAACTTCAA 59.171 37.500 0.00 0.00 0.00 2.69
2077 2618 5.048224 AGCTTTCATCATGTCCAACTTCAAG 60.048 40.000 0.00 0.00 0.00 3.02
2078 2619 5.706916 CTTTCATCATGTCCAACTTCAAGG 58.293 41.667 0.00 0.00 0.00 3.61
2079 2620 3.084039 TCATCATGTCCAACTTCAAGGC 58.916 45.455 0.00 0.00 0.00 4.35
2080 2621 2.655090 TCATGTCCAACTTCAAGGCA 57.345 45.000 0.00 0.00 0.00 4.75
2081 2622 2.229792 TCATGTCCAACTTCAAGGCAC 58.770 47.619 0.00 0.00 0.00 5.01
2082 2623 1.955778 CATGTCCAACTTCAAGGCACA 59.044 47.619 0.00 0.00 0.00 4.57
2083 2624 2.363306 TGTCCAACTTCAAGGCACAT 57.637 45.000 0.00 0.00 0.00 3.21
2084 2625 3.500448 TGTCCAACTTCAAGGCACATA 57.500 42.857 0.00 0.00 0.00 2.29
2085 2626 3.826524 TGTCCAACTTCAAGGCACATAA 58.173 40.909 0.00 0.00 0.00 1.90
2086 2627 3.820467 TGTCCAACTTCAAGGCACATAAG 59.180 43.478 0.00 0.00 0.00 1.73
2087 2628 2.819608 TCCAACTTCAAGGCACATAAGC 59.180 45.455 0.00 0.00 0.00 3.09
2088 2629 2.821969 CCAACTTCAAGGCACATAAGCT 59.178 45.455 0.00 0.00 34.17 3.74
2089 2630 4.009675 CCAACTTCAAGGCACATAAGCTA 58.990 43.478 0.00 0.00 34.17 3.32
2090 2631 4.641989 CCAACTTCAAGGCACATAAGCTAT 59.358 41.667 0.00 0.00 34.17 2.97
2091 2632 5.126061 CCAACTTCAAGGCACATAAGCTATT 59.874 40.000 0.00 0.00 34.17 1.73
2092 2633 6.350445 CCAACTTCAAGGCACATAAGCTATTT 60.350 38.462 0.00 0.00 34.17 1.40
2093 2634 6.199937 ACTTCAAGGCACATAAGCTATTTG 57.800 37.500 0.00 0.00 34.17 2.32
2094 2635 5.945784 ACTTCAAGGCACATAAGCTATTTGA 59.054 36.000 0.00 0.00 32.19 2.69
2095 2636 6.604795 ACTTCAAGGCACATAAGCTATTTGAT 59.395 34.615 0.00 0.00 33.23 2.57
2096 2637 7.123247 ACTTCAAGGCACATAAGCTATTTGATT 59.877 33.333 0.00 0.00 33.23 2.57
2097 2638 7.408756 TCAAGGCACATAAGCTATTTGATTT 57.591 32.000 0.00 0.00 30.55 2.17
2098 2639 8.518430 TCAAGGCACATAAGCTATTTGATTTA 57.482 30.769 0.00 0.00 30.55 1.40
2099 2640 8.623903 TCAAGGCACATAAGCTATTTGATTTAG 58.376 33.333 0.00 0.00 30.55 1.85
2100 2641 6.974965 AGGCACATAAGCTATTTGATTTAGC 58.025 36.000 0.00 0.00 41.93 3.09
2101 2642 6.015940 AGGCACATAAGCTATTTGATTTAGCC 60.016 38.462 0.00 0.00 42.46 3.93
2102 2643 6.015940 GGCACATAAGCTATTTGATTTAGCCT 60.016 38.462 0.00 0.00 42.46 4.58
2103 2644 7.428826 GCACATAAGCTATTTGATTTAGCCTT 58.571 34.615 0.00 0.00 42.46 4.35
2104 2645 7.380602 GCACATAAGCTATTTGATTTAGCCTTG 59.619 37.037 0.00 0.00 42.46 3.61
2105 2646 7.380602 CACATAAGCTATTTGATTTAGCCTTGC 59.619 37.037 0.00 0.00 42.46 4.01
2106 2647 7.286316 ACATAAGCTATTTGATTTAGCCTTGCT 59.714 33.333 0.00 0.00 42.46 3.91
2107 2648 5.764487 AGCTATTTGATTTAGCCTTGCTC 57.236 39.130 0.00 0.00 42.46 4.26
2108 2649 4.582240 AGCTATTTGATTTAGCCTTGCTCC 59.418 41.667 0.00 0.00 42.46 4.70
2109 2650 4.261783 GCTATTTGATTTAGCCTTGCTCCC 60.262 45.833 0.00 0.00 40.44 4.30
2110 2651 1.750193 TTGATTTAGCCTTGCTCCCG 58.250 50.000 0.00 0.00 40.44 5.14
2111 2652 0.618458 TGATTTAGCCTTGCTCCCGT 59.382 50.000 0.00 0.00 40.44 5.28
2112 2653 1.004277 TGATTTAGCCTTGCTCCCGTT 59.996 47.619 0.00 0.00 40.44 4.44
2113 2654 1.671328 GATTTAGCCTTGCTCCCGTTC 59.329 52.381 0.00 0.00 40.44 3.95
2114 2655 0.398696 TTTAGCCTTGCTCCCGTTCA 59.601 50.000 0.00 0.00 40.44 3.18
2115 2656 0.618458 TTAGCCTTGCTCCCGTTCAT 59.382 50.000 0.00 0.00 40.44 2.57
2116 2657 1.491668 TAGCCTTGCTCCCGTTCATA 58.508 50.000 0.00 0.00 40.44 2.15
2117 2658 0.618458 AGCCTTGCTCCCGTTCATAA 59.382 50.000 0.00 0.00 30.62 1.90
2118 2659 1.004277 AGCCTTGCTCCCGTTCATAAA 59.996 47.619 0.00 0.00 30.62 1.40
2119 2660 1.816224 GCCTTGCTCCCGTTCATAAAA 59.184 47.619 0.00 0.00 0.00 1.52
2120 2661 2.427095 GCCTTGCTCCCGTTCATAAAAT 59.573 45.455 0.00 0.00 0.00 1.82
2121 2662 3.734902 GCCTTGCTCCCGTTCATAAAATG 60.735 47.826 0.00 0.00 0.00 2.32
2122 2663 3.438360 CTTGCTCCCGTTCATAAAATGC 58.562 45.455 0.00 0.00 0.00 3.56
2123 2664 2.441410 TGCTCCCGTTCATAAAATGCA 58.559 42.857 0.00 0.00 0.00 3.96
2124 2665 2.822561 TGCTCCCGTTCATAAAATGCAA 59.177 40.909 0.00 0.00 0.00 4.08
2125 2666 3.256879 TGCTCCCGTTCATAAAATGCAAA 59.743 39.130 0.00 0.00 0.00 3.68
2126 2667 3.612423 GCTCCCGTTCATAAAATGCAAAC 59.388 43.478 0.00 0.00 0.00 2.93
2127 2668 4.804108 CTCCCGTTCATAAAATGCAAACA 58.196 39.130 0.00 0.00 0.00 2.83
2128 2669 5.201713 TCCCGTTCATAAAATGCAAACAA 57.798 34.783 0.00 0.00 0.00 2.83
2129 2670 5.788450 TCCCGTTCATAAAATGCAAACAAT 58.212 33.333 0.00 0.00 0.00 2.71
2130 2671 5.866633 TCCCGTTCATAAAATGCAAACAATC 59.133 36.000 0.00 0.00 0.00 2.67
2131 2672 5.636965 CCCGTTCATAAAATGCAAACAATCA 59.363 36.000 0.00 0.00 0.00 2.57
2132 2673 6.313411 CCCGTTCATAAAATGCAAACAATCAT 59.687 34.615 0.00 0.00 0.00 2.45
2133 2674 7.490725 CCCGTTCATAAAATGCAAACAATCATA 59.509 33.333 0.00 0.00 0.00 2.15
2134 2675 8.533965 CCGTTCATAAAATGCAAACAATCATAG 58.466 33.333 0.00 0.00 0.00 2.23
2135 2676 8.533965 CGTTCATAAAATGCAAACAATCATAGG 58.466 33.333 0.00 0.00 0.00 2.57
2136 2677 8.330302 GTTCATAAAATGCAAACAATCATAGGC 58.670 33.333 0.00 0.00 0.00 3.93
2137 2678 7.554211 TCATAAAATGCAAACAATCATAGGCA 58.446 30.769 0.00 0.00 35.54 4.75
2138 2679 7.492020 TCATAAAATGCAAACAATCATAGGCAC 59.508 33.333 0.00 0.00 33.67 5.01
2139 2680 4.804868 AATGCAAACAATCATAGGCACA 57.195 36.364 0.00 0.00 33.67 4.57
2140 2681 5.347620 AATGCAAACAATCATAGGCACAT 57.652 34.783 0.00 0.00 33.67 3.21
2141 2682 6.468333 AATGCAAACAATCATAGGCACATA 57.532 33.333 0.00 0.00 33.67 2.29
2142 2683 5.911378 TGCAAACAATCATAGGCACATAA 57.089 34.783 0.00 0.00 0.00 1.90
2143 2684 6.468333 TGCAAACAATCATAGGCACATAAT 57.532 33.333 0.00 0.00 0.00 1.28
2144 2685 6.274579 TGCAAACAATCATAGGCACATAATG 58.725 36.000 0.00 0.00 0.00 1.90
2145 2686 6.127394 TGCAAACAATCATAGGCACATAATGT 60.127 34.615 0.00 0.00 0.00 2.71
2146 2687 6.757947 GCAAACAATCATAGGCACATAATGTT 59.242 34.615 0.00 0.00 0.00 2.71
2147 2688 7.920151 GCAAACAATCATAGGCACATAATGTTA 59.080 33.333 0.00 0.00 0.00 2.41
2148 2689 9.970395 CAAACAATCATAGGCACATAATGTTAT 57.030 29.630 0.00 0.00 0.00 1.89
2150 2691 9.578576 AACAATCATAGGCACATAATGTTATCT 57.421 29.630 0.00 0.00 0.00 1.98
2151 2692 9.006839 ACAATCATAGGCACATAATGTTATCTG 57.993 33.333 0.00 0.00 0.00 2.90
2152 2693 9.006839 CAATCATAGGCACATAATGTTATCTGT 57.993 33.333 0.00 0.00 0.00 3.41
2153 2694 7.967890 TCATAGGCACATAATGTTATCTGTG 57.032 36.000 0.00 0.00 0.00 3.66
2154 2695 7.734942 TCATAGGCACATAATGTTATCTGTGA 58.265 34.615 5.76 3.86 0.00 3.58
2155 2696 8.377799 TCATAGGCACATAATGTTATCTGTGAT 58.622 33.333 5.76 0.00 0.00 3.06
2156 2697 8.663025 CATAGGCACATAATGTTATCTGTGATC 58.337 37.037 5.76 0.00 0.00 2.92
2157 2698 6.594744 AGGCACATAATGTTATCTGTGATCA 58.405 36.000 5.76 0.00 0.00 2.92
2158 2699 7.056006 AGGCACATAATGTTATCTGTGATCAA 58.944 34.615 0.00 0.00 0.00 2.57
2159 2700 7.012704 AGGCACATAATGTTATCTGTGATCAAC 59.987 37.037 0.00 0.00 0.00 3.18
2160 2701 7.134815 GCACATAATGTTATCTGTGATCAACC 58.865 38.462 0.00 0.00 0.00 3.77
2161 2702 7.012704 GCACATAATGTTATCTGTGATCAACCT 59.987 37.037 0.00 0.00 0.00 3.50
2162 2703 8.340443 CACATAATGTTATCTGTGATCAACCTG 58.660 37.037 0.00 0.00 0.00 4.00
2163 2704 5.824904 AATGTTATCTGTGATCAACCTGC 57.175 39.130 0.00 0.00 0.00 4.85
2164 2705 3.609853 TGTTATCTGTGATCAACCTGCC 58.390 45.455 0.00 0.00 0.00 4.85
2165 2706 2.945668 GTTATCTGTGATCAACCTGCCC 59.054 50.000 0.00 0.00 0.00 5.36
2166 2707 0.994247 ATCTGTGATCAACCTGCCCA 59.006 50.000 0.00 0.00 0.00 5.36
2167 2708 0.325933 TCTGTGATCAACCTGCCCAG 59.674 55.000 0.00 0.00 0.00 4.45
2168 2709 0.325933 CTGTGATCAACCTGCCCAGA 59.674 55.000 0.00 0.00 0.00 3.86
2169 2710 0.770499 TGTGATCAACCTGCCCAGAA 59.230 50.000 0.00 0.00 0.00 3.02
2170 2711 1.168714 GTGATCAACCTGCCCAGAAC 58.831 55.000 0.00 0.00 0.00 3.01
2171 2712 0.770499 TGATCAACCTGCCCAGAACA 59.230 50.000 0.00 0.00 0.00 3.18
2172 2713 1.144708 TGATCAACCTGCCCAGAACAA 59.855 47.619 0.00 0.00 0.00 2.83
2173 2714 2.238521 GATCAACCTGCCCAGAACAAA 58.761 47.619 0.00 0.00 0.00 2.83
2174 2715 1.398692 TCAACCTGCCCAGAACAAAC 58.601 50.000 0.00 0.00 0.00 2.93
2175 2716 1.110442 CAACCTGCCCAGAACAAACA 58.890 50.000 0.00 0.00 0.00 2.83
2176 2717 1.111277 AACCTGCCCAGAACAAACAC 58.889 50.000 0.00 0.00 0.00 3.32
2177 2718 0.258774 ACCTGCCCAGAACAAACACT 59.741 50.000 0.00 0.00 0.00 3.55
2178 2719 0.670162 CCTGCCCAGAACAAACACTG 59.330 55.000 0.00 0.00 0.00 3.66
2179 2720 1.679139 CTGCCCAGAACAAACACTGA 58.321 50.000 0.00 0.00 36.38 3.41
2180 2721 1.334869 CTGCCCAGAACAAACACTGAC 59.665 52.381 0.00 0.00 36.38 3.51
2181 2722 1.064758 TGCCCAGAACAAACACTGACT 60.065 47.619 0.00 0.00 36.38 3.41
2182 2723 1.334869 GCCCAGAACAAACACTGACTG 59.665 52.381 0.00 0.00 36.38 3.51
2183 2724 2.643551 CCCAGAACAAACACTGACTGT 58.356 47.619 0.00 0.00 36.38 3.55
2184 2725 3.016736 CCCAGAACAAACACTGACTGTT 58.983 45.455 0.00 1.63 45.68 3.16
2185 2726 3.065371 CCCAGAACAAACACTGACTGTTC 59.935 47.826 14.86 14.86 42.70 3.18
2186 2727 3.065371 CCAGAACAAACACTGACTGTTCC 59.935 47.826 17.24 6.76 46.58 3.62
2187 2728 3.941483 CAGAACAAACACTGACTGTTCCT 59.059 43.478 17.24 8.15 46.58 3.36
2188 2729 4.034510 CAGAACAAACACTGACTGTTCCTC 59.965 45.833 17.24 2.85 46.58 3.71
2189 2730 3.627395 ACAAACACTGACTGTTCCTCA 57.373 42.857 0.00 0.00 42.70 3.86
2190 2731 3.535561 ACAAACACTGACTGTTCCTCAG 58.464 45.455 0.00 0.00 42.70 3.35
2191 2732 3.197766 ACAAACACTGACTGTTCCTCAGA 59.802 43.478 2.47 0.00 42.70 3.27
2192 2733 4.141620 ACAAACACTGACTGTTCCTCAGAT 60.142 41.667 2.47 0.00 42.70 2.90
2193 2734 5.070446 ACAAACACTGACTGTTCCTCAGATA 59.930 40.000 2.47 0.00 42.70 1.98
2194 2735 6.169094 CAAACACTGACTGTTCCTCAGATAT 58.831 40.000 2.47 0.00 42.70 1.63
2195 2736 5.336150 ACACTGACTGTTCCTCAGATATG 57.664 43.478 2.47 0.00 46.27 1.78
2196 2737 5.019470 ACACTGACTGTTCCTCAGATATGA 58.981 41.667 2.47 0.00 46.27 2.15
2197 2738 5.660417 ACACTGACTGTTCCTCAGATATGAT 59.340 40.000 2.47 0.00 46.27 2.45
2198 2739 5.984323 CACTGACTGTTCCTCAGATATGATG 59.016 44.000 2.47 0.00 46.27 3.07
2199 2740 5.660417 ACTGACTGTTCCTCAGATATGATGT 59.340 40.000 2.47 0.00 46.27 3.06
2200 2741 5.910614 TGACTGTTCCTCAGATATGATGTG 58.089 41.667 1.79 0.00 46.27 3.21
2201 2742 5.423290 TGACTGTTCCTCAGATATGATGTGT 59.577 40.000 1.79 0.00 46.27 3.72
2202 2743 5.668471 ACTGTTCCTCAGATATGATGTGTG 58.332 41.667 1.79 0.00 46.27 3.82
2203 2744 5.027293 TGTTCCTCAGATATGATGTGTGG 57.973 43.478 0.00 0.00 38.22 4.17
2204 2745 4.471025 TGTTCCTCAGATATGATGTGTGGT 59.529 41.667 0.00 0.00 38.10 4.16
2205 2746 5.660864 TGTTCCTCAGATATGATGTGTGGTA 59.339 40.000 0.00 0.00 38.10 3.25
2206 2747 6.183360 TGTTCCTCAGATATGATGTGTGGTAG 60.183 42.308 0.00 0.00 38.10 3.18
2207 2748 4.835056 TCCTCAGATATGATGTGTGGTAGG 59.165 45.833 0.00 0.00 38.10 3.18
2208 2749 4.835056 CCTCAGATATGATGTGTGGTAGGA 59.165 45.833 0.00 0.00 33.85 2.94
2209 2750 5.483231 CCTCAGATATGATGTGTGGTAGGAT 59.517 44.000 0.00 0.00 33.85 3.24
2210 2751 6.350629 TCAGATATGATGTGTGGTAGGATG 57.649 41.667 0.00 0.00 0.00 3.51
2211 2752 6.077322 TCAGATATGATGTGTGGTAGGATGA 58.923 40.000 0.00 0.00 0.00 2.92
2212 2753 6.727697 TCAGATATGATGTGTGGTAGGATGAT 59.272 38.462 0.00 0.00 0.00 2.45
2213 2754 7.236225 TCAGATATGATGTGTGGTAGGATGATT 59.764 37.037 0.00 0.00 0.00 2.57
2214 2755 7.881751 CAGATATGATGTGTGGTAGGATGATTT 59.118 37.037 0.00 0.00 0.00 2.17
2215 2756 8.443176 AGATATGATGTGTGGTAGGATGATTTT 58.557 33.333 0.00 0.00 0.00 1.82
2216 2757 6.704289 ATGATGTGTGGTAGGATGATTTTG 57.296 37.500 0.00 0.00 0.00 2.44
2217 2758 5.814481 TGATGTGTGGTAGGATGATTTTGA 58.186 37.500 0.00 0.00 0.00 2.69
2218 2759 5.882000 TGATGTGTGGTAGGATGATTTTGAG 59.118 40.000 0.00 0.00 0.00 3.02
2219 2760 4.009675 TGTGTGGTAGGATGATTTTGAGC 58.990 43.478 0.00 0.00 0.00 4.26
2220 2761 3.378427 GTGTGGTAGGATGATTTTGAGCC 59.622 47.826 0.00 0.00 0.00 4.70
2221 2762 3.266772 TGTGGTAGGATGATTTTGAGCCT 59.733 43.478 0.00 0.00 0.00 4.58
2222 2763 3.629398 GTGGTAGGATGATTTTGAGCCTG 59.371 47.826 0.00 0.00 0.00 4.85
2223 2764 3.266772 TGGTAGGATGATTTTGAGCCTGT 59.733 43.478 0.00 0.00 0.00 4.00
2224 2765 4.263905 TGGTAGGATGATTTTGAGCCTGTT 60.264 41.667 0.00 0.00 0.00 3.16
2225 2766 4.706962 GGTAGGATGATTTTGAGCCTGTTT 59.293 41.667 0.00 0.00 0.00 2.83
2226 2767 4.796038 AGGATGATTTTGAGCCTGTTTG 57.204 40.909 0.00 0.00 0.00 2.93
2227 2768 3.056322 AGGATGATTTTGAGCCTGTTTGC 60.056 43.478 0.00 0.00 0.00 3.68
2228 2769 3.306225 GGATGATTTTGAGCCTGTTTGCA 60.306 43.478 0.00 0.00 0.00 4.08
2229 2770 3.815856 TGATTTTGAGCCTGTTTGCAA 57.184 38.095 0.00 0.00 0.00 4.08
2230 2771 3.456280 TGATTTTGAGCCTGTTTGCAAC 58.544 40.909 0.00 0.00 0.00 4.17
2231 2772 3.118847 TGATTTTGAGCCTGTTTGCAACA 60.119 39.130 0.00 0.00 39.52 3.33
2232 2773 3.325293 TTTTGAGCCTGTTTGCAACAA 57.675 38.095 0.00 0.00 41.61 2.83
2233 2774 2.292103 TTGAGCCTGTTTGCAACAAC 57.708 45.000 0.00 0.00 41.61 3.32
2234 2775 1.473258 TGAGCCTGTTTGCAACAACT 58.527 45.000 0.00 1.64 41.61 3.16
2235 2776 1.824230 TGAGCCTGTTTGCAACAACTT 59.176 42.857 0.00 0.00 41.61 2.66
2236 2777 2.159254 TGAGCCTGTTTGCAACAACTTC 60.159 45.455 0.00 0.00 41.61 3.01
2237 2778 1.824230 AGCCTGTTTGCAACAACTTCA 59.176 42.857 0.00 0.00 41.61 3.02
2238 2779 2.159198 AGCCTGTTTGCAACAACTTCAG 60.159 45.455 0.00 1.69 41.61 3.02
2239 2780 2.159254 GCCTGTTTGCAACAACTTCAGA 60.159 45.455 0.00 0.00 41.61 3.27
2240 2781 3.675775 GCCTGTTTGCAACAACTTCAGAA 60.676 43.478 0.00 0.00 41.61 3.02
2241 2782 4.107622 CCTGTTTGCAACAACTTCAGAAG 58.892 43.478 8.77 8.77 41.61 2.85
2242 2783 3.510719 TGTTTGCAACAACTTCAGAAGC 58.489 40.909 10.33 0.00 38.72 3.86
2243 2784 3.056962 TGTTTGCAACAACTTCAGAAGCA 60.057 39.130 10.33 0.00 38.72 3.91
2244 2785 3.865011 TTGCAACAACTTCAGAAGCAA 57.135 38.095 10.33 5.67 38.07 3.91
2245 2786 4.389890 TTGCAACAACTTCAGAAGCAAT 57.610 36.364 10.33 0.00 35.81 3.56
2246 2787 4.389890 TGCAACAACTTCAGAAGCAATT 57.610 36.364 10.33 0.00 0.00 2.32
2247 2788 4.757594 TGCAACAACTTCAGAAGCAATTT 58.242 34.783 10.33 0.00 0.00 1.82
2248 2789 4.567558 TGCAACAACTTCAGAAGCAATTTG 59.432 37.500 10.33 9.47 0.00 2.32
2249 2790 4.805192 GCAACAACTTCAGAAGCAATTTGA 59.195 37.500 10.33 0.00 0.00 2.69
2250 2791 5.291614 GCAACAACTTCAGAAGCAATTTGAA 59.708 36.000 10.33 0.00 0.00 2.69
2251 2792 6.183360 GCAACAACTTCAGAAGCAATTTGAAA 60.183 34.615 10.33 0.00 31.11 2.69
2252 2793 7.623925 GCAACAACTTCAGAAGCAATTTGAAAA 60.624 33.333 10.33 0.00 31.11 2.29
2253 2794 7.903995 ACAACTTCAGAAGCAATTTGAAAAA 57.096 28.000 10.33 0.00 31.11 1.94
2300 2841 8.767478 ATCACATGATTTGGAAAAAGTTCATC 57.233 30.769 0.00 0.00 35.25 2.92
2301 2842 6.862608 TCACATGATTTGGAAAAAGTTCATCG 59.137 34.615 0.00 0.00 35.25 3.84
2302 2843 6.862608 CACATGATTTGGAAAAAGTTCATCGA 59.137 34.615 0.00 0.00 35.25 3.59
2303 2844 7.543172 CACATGATTTGGAAAAAGTTCATCGAT 59.457 33.333 0.00 0.00 35.25 3.59
2304 2845 8.090214 ACATGATTTGGAAAAAGTTCATCGATT 58.910 29.630 0.00 0.00 35.25 3.34
2305 2846 8.928733 CATGATTTGGAAAAAGTTCATCGATTT 58.071 29.630 0.00 0.00 35.25 2.17
2306 2847 8.885494 TGATTTGGAAAAAGTTCATCGATTTT 57.115 26.923 0.00 0.00 35.25 1.82
2307 2848 8.763356 TGATTTGGAAAAAGTTCATCGATTTTG 58.237 29.630 0.00 0.00 35.25 2.44
2308 2849 8.885494 ATTTGGAAAAAGTTCATCGATTTTGA 57.115 26.923 0.00 0.00 35.25 2.69
2309 2850 8.709386 TTTGGAAAAAGTTCATCGATTTTGAA 57.291 26.923 0.00 0.00 35.25 2.69
2310 2851 8.709386 TTGGAAAAAGTTCATCGATTTTGAAA 57.291 26.923 0.00 0.00 35.03 2.69
2311 2852 8.709386 TGGAAAAAGTTCATCGATTTTGAAAA 57.291 26.923 0.00 0.00 35.03 2.29
2312 2853 9.155975 TGGAAAAAGTTCATCGATTTTGAAAAA 57.844 25.926 0.00 0.00 35.03 1.94
2402 2943 9.706691 TCTAGTTGACTAGTTTTAATCTTGGTG 57.293 33.333 15.67 0.00 44.74 4.17
2403 2944 9.706691 CTAGTTGACTAGTTTTAATCTTGGTGA 57.293 33.333 9.51 0.00 40.72 4.02
2405 2946 9.003658 AGTTGACTAGTTTTAATCTTGGTGATG 57.996 33.333 0.00 0.00 35.21 3.07
2406 2947 8.999431 GTTGACTAGTTTTAATCTTGGTGATGA 58.001 33.333 0.00 0.00 35.21 2.92
2407 2948 8.547967 TGACTAGTTTTAATCTTGGTGATGAC 57.452 34.615 0.00 0.00 35.21 3.06
2408 2949 7.606456 TGACTAGTTTTAATCTTGGTGATGACC 59.394 37.037 0.00 0.00 43.48 4.02
2409 2950 7.690256 ACTAGTTTTAATCTTGGTGATGACCT 58.310 34.615 2.11 0.00 43.58 3.85
2410 2951 6.824305 AGTTTTAATCTTGGTGATGACCTG 57.176 37.500 2.11 0.00 43.58 4.00
2411 2952 5.183904 AGTTTTAATCTTGGTGATGACCTGC 59.816 40.000 2.11 0.00 43.58 4.85
2412 2953 4.574674 TTAATCTTGGTGATGACCTGCT 57.425 40.909 2.11 0.00 43.58 4.24
2413 2954 2.414994 ATCTTGGTGATGACCTGCTG 57.585 50.000 2.11 0.00 43.58 4.41
2414 2955 0.325933 TCTTGGTGATGACCTGCTGG 59.674 55.000 8.29 8.29 43.58 4.85
2415 2956 0.679002 CTTGGTGATGACCTGCTGGG 60.679 60.000 14.82 4.64 43.58 4.45
2416 2957 2.141011 TTGGTGATGACCTGCTGGGG 62.141 60.000 14.82 1.98 43.58 4.96
2417 2958 2.439156 GTGATGACCTGCTGGGGC 60.439 66.667 14.82 4.83 45.52 5.80
2418 2959 2.611800 TGATGACCTGCTGGGGCT 60.612 61.111 14.82 0.00 45.52 5.19
2419 2960 2.233566 TGATGACCTGCTGGGGCTT 61.234 57.895 14.82 2.42 45.52 4.35
2420 2961 1.751927 GATGACCTGCTGGGGCTTG 60.752 63.158 14.82 0.00 45.52 4.01
2421 2962 2.490270 GATGACCTGCTGGGGCTTGT 62.490 60.000 14.82 0.00 45.52 3.16
2422 2963 2.085343 ATGACCTGCTGGGGCTTGTT 62.085 55.000 14.82 0.00 45.52 2.83
2423 2964 1.531602 GACCTGCTGGGGCTTGTTT 60.532 57.895 14.82 0.00 40.87 2.83
2424 2965 1.075301 ACCTGCTGGGGCTTGTTTT 60.075 52.632 14.82 0.00 40.03 2.43
2425 2966 1.115326 ACCTGCTGGGGCTTGTTTTC 61.115 55.000 14.82 0.00 40.03 2.29
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.518303 GGCTGTCCTAGGTTCTCCTAAAA 59.482 47.826 9.08 0.00 44.63 1.52
1 2 3.105283 GGCTGTCCTAGGTTCTCCTAAA 58.895 50.000 9.08 0.00 44.63 1.85
3 4 1.063114 GGGCTGTCCTAGGTTCTCCTA 60.063 57.143 9.08 0.00 44.58 2.94
5 6 0.617820 TGGGCTGTCCTAGGTTCTCC 60.618 60.000 9.08 6.51 36.20 3.71
6 7 0.537653 GTGGGCTGTCCTAGGTTCTC 59.462 60.000 9.08 0.00 36.20 2.87
7 8 1.258445 CGTGGGCTGTCCTAGGTTCT 61.258 60.000 9.08 0.00 36.20 3.01
8 9 1.218316 CGTGGGCTGTCCTAGGTTC 59.782 63.158 9.08 4.27 36.20 3.62
9 10 2.955881 GCGTGGGCTGTCCTAGGTT 61.956 63.158 9.08 0.00 36.20 3.50
10 11 3.391382 GCGTGGGCTGTCCTAGGT 61.391 66.667 9.08 0.00 36.20 3.08
11 12 3.390521 TGCGTGGGCTGTCCTAGG 61.391 66.667 0.82 0.82 40.82 3.02
13 14 4.063967 CGTGCGTGGGCTGTCCTA 62.064 66.667 0.00 0.00 40.82 2.94
32 33 2.328099 CCTGAACCTTGCCTCGTGC 61.328 63.158 0.00 0.00 41.77 5.34
33 34 0.535102 AACCTGAACCTTGCCTCGTG 60.535 55.000 0.00 0.00 0.00 4.35
34 35 0.535102 CAACCTGAACCTTGCCTCGT 60.535 55.000 0.00 0.00 0.00 4.18
35 36 0.250295 TCAACCTGAACCTTGCCTCG 60.250 55.000 0.00 0.00 0.00 4.63
36 37 2.087646 GATCAACCTGAACCTTGCCTC 58.912 52.381 0.00 0.00 0.00 4.70
37 38 1.707427 AGATCAACCTGAACCTTGCCT 59.293 47.619 0.00 0.00 0.00 4.75
38 39 2.087646 GAGATCAACCTGAACCTTGCC 58.912 52.381 0.00 0.00 0.00 4.52
39 40 3.006247 GAGAGATCAACCTGAACCTTGC 58.994 50.000 0.00 0.00 0.00 4.01
40 41 4.550076 AGAGAGATCAACCTGAACCTTG 57.450 45.455 0.00 0.00 0.00 3.61
41 42 4.805609 GCAAGAGAGATCAACCTGAACCTT 60.806 45.833 0.00 0.00 0.00 3.50
42 43 3.307339 GCAAGAGAGATCAACCTGAACCT 60.307 47.826 0.00 0.00 0.00 3.50
43 44 3.006247 GCAAGAGAGATCAACCTGAACC 58.994 50.000 0.00 0.00 0.00 3.62
44 45 3.683822 CAGCAAGAGAGATCAACCTGAAC 59.316 47.826 0.00 0.00 0.00 3.18
45 46 3.326006 ACAGCAAGAGAGATCAACCTGAA 59.674 43.478 0.00 0.00 0.00 3.02
46 47 2.902486 ACAGCAAGAGAGATCAACCTGA 59.098 45.455 0.00 0.00 0.00 3.86
47 48 3.001414 CACAGCAAGAGAGATCAACCTG 58.999 50.000 0.00 0.00 0.00 4.00
48 49 2.636893 ACACAGCAAGAGAGATCAACCT 59.363 45.455 0.00 0.00 0.00 3.50
49 50 2.740981 CACACAGCAAGAGAGATCAACC 59.259 50.000 0.00 0.00 0.00 3.77
50 51 3.397482 ACACACAGCAAGAGAGATCAAC 58.603 45.455 0.00 0.00 0.00 3.18
51 52 3.758755 ACACACAGCAAGAGAGATCAA 57.241 42.857 0.00 0.00 0.00 2.57
52 53 3.758755 AACACACAGCAAGAGAGATCA 57.241 42.857 0.00 0.00 0.00 2.92
53 54 5.429957 AAAAACACACAGCAAGAGAGATC 57.570 39.130 0.00 0.00 0.00 2.75
74 75 1.606668 GGATGCACGACACAGGAAAAA 59.393 47.619 0.00 0.00 0.00 1.94
75 76 1.234821 GGATGCACGACACAGGAAAA 58.765 50.000 0.00 0.00 0.00 2.29
76 77 0.605319 GGGATGCACGACACAGGAAA 60.605 55.000 0.00 0.00 0.00 3.13
86 87 0.957395 AGAAACTGCAGGGATGCACG 60.957 55.000 19.93 0.00 40.23 5.34
104 105 0.739462 TCTAATGGGCACGCAACGAG 60.739 55.000 0.00 0.00 0.00 4.18
109 110 3.386726 ACTAATAGTCTAATGGGCACGCA 59.613 43.478 0.00 0.00 0.00 5.24
110 111 3.991367 ACTAATAGTCTAATGGGCACGC 58.009 45.455 0.00 0.00 0.00 5.34
142 143 4.967575 CGATGTGTACGAGCAAAAAGTTTT 59.032 37.500 0.00 0.00 0.00 2.43
149 150 1.658596 GCATCGATGTGTACGAGCAAA 59.341 47.619 25.47 0.00 42.81 3.68
151 152 0.455815 AGCATCGATGTGTACGAGCA 59.544 50.000 25.47 0.00 42.81 4.26
156 157 1.571919 GGGTCAGCATCGATGTGTAC 58.428 55.000 25.47 18.95 0.00 2.90
162 163 1.135094 ATTCAGGGGTCAGCATCGAT 58.865 50.000 0.00 0.00 0.00 3.59
178 180 5.828299 TCATGTGTATTTTCCCCGAATTC 57.172 39.130 0.00 0.00 0.00 2.17
184 186 7.342026 AGGAATAGTTTCATGTGTATTTTCCCC 59.658 37.037 11.08 0.00 33.23 4.81
205 208 0.971386 CTTTGCCAGTTGCCAGGAAT 59.029 50.000 0.00 0.00 40.16 3.01
208 211 0.245539 CATCTTTGCCAGTTGCCAGG 59.754 55.000 0.00 0.00 40.16 4.45
239 242 1.391485 GTGAGTAGCAGCACATGAACG 59.609 52.381 0.00 0.00 35.19 3.95
241 244 2.354103 GGAGTGAGTAGCAGCACATGAA 60.354 50.000 0.00 0.00 37.48 2.57
242 245 1.205655 GGAGTGAGTAGCAGCACATGA 59.794 52.381 0.00 0.00 37.48 3.07
243 246 1.649664 GGAGTGAGTAGCAGCACATG 58.350 55.000 0.00 0.00 37.48 3.21
244 247 0.174389 CGGAGTGAGTAGCAGCACAT 59.826 55.000 0.00 0.00 37.48 3.21
246 249 1.153745 CCGGAGTGAGTAGCAGCAC 60.154 63.158 0.00 0.00 35.30 4.40
247 250 3.006756 GCCGGAGTGAGTAGCAGCA 62.007 63.158 5.05 0.00 0.00 4.41
248 251 2.202810 GCCGGAGTGAGTAGCAGC 60.203 66.667 5.05 0.00 0.00 5.25
295 346 0.391597 ATGGGGTCGCATTAGGTACG 59.608 55.000 0.00 0.00 0.00 3.67
327 378 1.610522 CCTTTGCTGTCTCCCTTTGTG 59.389 52.381 0.00 0.00 0.00 3.33
367 418 4.742438 ACATTACCAGTACTGCAAAACG 57.258 40.909 17.86 10.76 0.00 3.60
368 419 8.859517 TTAAAACATTACCAGTACTGCAAAAC 57.140 30.769 17.86 0.00 0.00 2.43
369 420 8.904834 TCTTAAAACATTACCAGTACTGCAAAA 58.095 29.630 17.86 10.74 0.00 2.44
370 421 8.453238 TCTTAAAACATTACCAGTACTGCAAA 57.547 30.769 17.86 13.15 0.00 3.68
371 422 8.453238 TTCTTAAAACATTACCAGTACTGCAA 57.547 30.769 17.86 13.18 0.00 4.08
372 423 7.717875 ACTTCTTAAAACATTACCAGTACTGCA 59.282 33.333 17.86 4.31 0.00 4.41
373 424 8.095937 ACTTCTTAAAACATTACCAGTACTGC 57.904 34.615 17.86 0.00 0.00 4.40
393 510 8.161699 TCTTTAACTCGCCATTTTTAACTTCT 57.838 30.769 0.00 0.00 0.00 2.85
452 577 2.271800 CACACTACCGCAAAGGATCTC 58.728 52.381 0.00 0.00 45.00 2.75
460 585 0.682292 TGTCATCCACACTACCGCAA 59.318 50.000 0.00 0.00 0.00 4.85
511 636 7.761409 TCCTTTGTAATATCACATTGTTCAGC 58.239 34.615 0.00 0.00 0.00 4.26
541 668 3.318191 GCCTCTCATCACTGGCCT 58.682 61.111 3.32 0.00 39.49 5.19
548 675 0.397675 ATGGTCTCGGCCTCTCATCA 60.398 55.000 0.00 0.00 0.00 3.07
558 688 4.449068 GTGCAGTATAATCAATGGTCTCGG 59.551 45.833 0.00 0.00 0.00 4.63
571 851 1.487482 GAGCGCATCGTGCAGTATAA 58.513 50.000 11.47 0.00 45.36 0.98
590 870 2.074547 TTCGAAGTTAACTCTGCGGG 57.925 50.000 8.95 0.00 37.13 6.13
592 872 3.725010 GCCATTTCGAAGTTAACTCTGCG 60.725 47.826 8.95 12.95 37.78 5.18
607 914 2.747396 TGTCAATGCTTGGCCATTTC 57.253 45.000 6.09 0.00 33.35 2.17
614 921 0.592637 TCGCACTTGTCAATGCTTGG 59.407 50.000 14.13 4.10 39.79 3.61
620 927 5.482908 AGTATTCTCTTCGCACTTGTCAAT 58.517 37.500 0.00 0.00 0.00 2.57
632 939 4.641094 TGAGACGGAGGAAGTATTCTCTTC 59.359 45.833 0.00 0.00 46.56 2.87
637 944 6.986904 AATTTTGAGACGGAGGAAGTATTC 57.013 37.500 0.00 0.00 46.67 1.75
644 951 3.153919 CCCAAAATTTTGAGACGGAGGA 58.846 45.455 28.44 0.00 40.55 3.71
683 990 5.960105 GCAAAATAATTTTCTCTCGGTCGAG 59.040 40.000 13.56 13.56 43.21 4.04
711 1018 2.036346 GGCTGCAAGAAATTGGACACTT 59.964 45.455 0.50 0.00 34.07 3.16
712 1019 1.615392 GGCTGCAAGAAATTGGACACT 59.385 47.619 0.50 0.00 34.07 3.55
777 1246 0.165295 CAAGCACGCATCACTGTCTG 59.835 55.000 0.00 0.00 0.00 3.51
780 1249 1.168407 AAGCAAGCACGCATCACTGT 61.168 50.000 0.00 0.00 0.00 3.55
816 1285 1.931635 TTGTATCCCTGTTTTGCCCC 58.068 50.000 0.00 0.00 0.00 5.80
829 1298 5.002464 ACTCCAATGCTGCATTTTGTATC 57.998 39.130 24.28 0.00 31.05 2.24
941 1411 1.842381 AAGGGAAGGAACAGAGGCCG 61.842 60.000 0.00 0.00 0.00 6.13
974 1446 0.660005 CTGAGCTAGCAGTCGATCGC 60.660 60.000 18.83 5.80 0.00 4.58
1012 1490 3.712881 GGTGGTTGACGTGAGCGC 61.713 66.667 0.00 0.00 42.83 5.92
1098 1576 2.223829 GGACGATGAAGATGATGACGGT 60.224 50.000 0.00 0.00 0.00 4.83
1323 1801 2.695597 CTCCTCCTGCTCCTCCCT 59.304 66.667 0.00 0.00 0.00 4.20
1347 1825 2.304831 GCCCTTCCTGCTTCCTCCT 61.305 63.158 0.00 0.00 0.00 3.69
1398 1876 0.729116 GATCACCGTGGCAACTCATG 59.271 55.000 0.00 0.00 37.61 3.07
1399 1877 0.324614 TGATCACCGTGGCAACTCAT 59.675 50.000 0.00 0.00 37.61 2.90
1402 1880 1.909700 ATTTGATCACCGTGGCAACT 58.090 45.000 0.00 0.00 37.61 3.16
1428 1906 1.835121 TTAGCGTTGGTCGATCGATG 58.165 50.000 22.50 10.09 42.86 3.84
1499 1980 2.623878 TGGTCAAAACTAGCCACGAA 57.376 45.000 0.00 0.00 0.00 3.85
1500 1981 2.851263 ATGGTCAAAACTAGCCACGA 57.149 45.000 0.00 0.00 33.42 4.35
1502 1983 4.760204 ACTTGTATGGTCAAAACTAGCCAC 59.240 41.667 0.00 0.00 33.42 5.01
1503 1984 4.759693 CACTTGTATGGTCAAAACTAGCCA 59.240 41.667 0.00 0.00 35.28 4.75
1504 1985 4.379499 GCACTTGTATGGTCAAAACTAGCC 60.379 45.833 0.00 0.00 0.00 3.93
1505 1986 4.379499 GGCACTTGTATGGTCAAAACTAGC 60.379 45.833 0.00 0.00 0.00 3.42
1506 1987 4.156008 GGGCACTTGTATGGTCAAAACTAG 59.844 45.833 0.00 0.00 0.00 2.57
1507 1988 4.076394 GGGCACTTGTATGGTCAAAACTA 58.924 43.478 0.00 0.00 0.00 2.24
1508 1989 2.890945 GGGCACTTGTATGGTCAAAACT 59.109 45.455 0.00 0.00 0.00 2.66
1509 1990 2.351350 CGGGCACTTGTATGGTCAAAAC 60.351 50.000 0.00 0.00 0.00 2.43
1510 1991 1.883275 CGGGCACTTGTATGGTCAAAA 59.117 47.619 0.00 0.00 0.00 2.44
1511 1992 1.529226 CGGGCACTTGTATGGTCAAA 58.471 50.000 0.00 0.00 0.00 2.69
1512 1993 0.958382 GCGGGCACTTGTATGGTCAA 60.958 55.000 0.00 0.00 0.00 3.18
1513 1994 1.376683 GCGGGCACTTGTATGGTCA 60.377 57.895 0.00 0.00 0.00 4.02
1514 1995 2.112815 GGCGGGCACTTGTATGGTC 61.113 63.158 0.00 0.00 0.00 4.02
1515 1996 1.268992 TAGGCGGGCACTTGTATGGT 61.269 55.000 3.78 0.00 0.00 3.55
1516 1997 0.107410 TTAGGCGGGCACTTGTATGG 60.107 55.000 3.78 0.00 0.00 2.74
1517 1998 1.299541 CTTAGGCGGGCACTTGTATG 58.700 55.000 3.78 0.00 0.00 2.39
1518 1999 0.909623 ACTTAGGCGGGCACTTGTAT 59.090 50.000 3.78 0.00 0.00 2.29
1519 2000 0.688487 AACTTAGGCGGGCACTTGTA 59.312 50.000 3.78 0.00 0.00 2.41
1520 2001 0.179001 AAACTTAGGCGGGCACTTGT 60.179 50.000 3.78 0.00 0.00 3.16
1521 2002 0.240945 CAAACTTAGGCGGGCACTTG 59.759 55.000 3.78 0.00 0.00 3.16
1522 2003 0.109723 TCAAACTTAGGCGGGCACTT 59.890 50.000 3.78 0.00 0.00 3.16
1523 2004 0.328258 ATCAAACTTAGGCGGGCACT 59.672 50.000 3.78 0.00 0.00 4.40
1524 2005 1.173913 AATCAAACTTAGGCGGGCAC 58.826 50.000 3.78 0.00 0.00 5.01
1525 2006 2.791347 TAATCAAACTTAGGCGGGCA 57.209 45.000 3.78 0.00 0.00 5.36
1526 2007 3.795488 GCATTAATCAAACTTAGGCGGGC 60.795 47.826 0.00 0.00 0.00 6.13
1527 2008 3.632145 AGCATTAATCAAACTTAGGCGGG 59.368 43.478 0.00 0.00 0.00 6.13
1528 2009 4.096382 ACAGCATTAATCAAACTTAGGCGG 59.904 41.667 0.00 0.00 0.00 6.13
1529 2010 5.235305 ACAGCATTAATCAAACTTAGGCG 57.765 39.130 0.00 0.00 0.00 5.52
1530 2011 7.013274 TCCATACAGCATTAATCAAACTTAGGC 59.987 37.037 0.00 0.00 0.00 3.93
1531 2012 8.450578 TCCATACAGCATTAATCAAACTTAGG 57.549 34.615 0.00 0.00 0.00 2.69
1532 2013 9.113838 ACTCCATACAGCATTAATCAAACTTAG 57.886 33.333 0.00 0.00 0.00 2.18
1574 2096 6.057533 CACTATGATGGAATTTCACAGCCTA 58.942 40.000 0.00 0.00 0.00 3.93
1575 2097 4.885907 CACTATGATGGAATTTCACAGCCT 59.114 41.667 0.00 0.00 0.00 4.58
1576 2098 4.641989 ACACTATGATGGAATTTCACAGCC 59.358 41.667 0.00 0.00 0.00 4.85
1577 2099 5.824904 ACACTATGATGGAATTTCACAGC 57.175 39.130 0.00 0.00 0.00 4.40
1578 2100 6.375174 TGGAACACTATGATGGAATTTCACAG 59.625 38.462 0.00 0.00 0.00 3.66
1581 2103 7.773489 TTTGGAACACTATGATGGAATTTCA 57.227 32.000 0.00 0.00 39.29 2.69
1582 2104 8.469200 TCATTTGGAACACTATGATGGAATTTC 58.531 33.333 0.00 0.00 39.29 2.17
1613 2142 9.150348 CCACTTCTTTTGTTTTACAGTTGAAAT 57.850 29.630 0.00 0.00 0.00 2.17
1616 2145 7.392113 TCTCCACTTCTTTTGTTTTACAGTTGA 59.608 33.333 0.00 0.00 0.00 3.18
1617 2146 7.535139 TCTCCACTTCTTTTGTTTTACAGTTG 58.465 34.615 0.00 0.00 0.00 3.16
1619 2148 7.610305 TCTTCTCCACTTCTTTTGTTTTACAGT 59.390 33.333 0.00 0.00 0.00 3.55
1621 2150 7.931578 TCTTCTCCACTTCTTTTGTTTTACA 57.068 32.000 0.00 0.00 0.00 2.41
1622 2151 8.406297 ACATCTTCTCCACTTCTTTTGTTTTAC 58.594 33.333 0.00 0.00 0.00 2.01
1623 2152 8.405531 CACATCTTCTCCACTTCTTTTGTTTTA 58.594 33.333 0.00 0.00 0.00 1.52
1654 2187 6.018343 CACAACTTTTTCCGGCACAAAAATAT 60.018 34.615 11.43 2.94 33.37 1.28
1656 2189 4.094146 CACAACTTTTTCCGGCACAAAAAT 59.906 37.500 11.43 0.00 33.37 1.82
1657 2190 3.433615 CACAACTTTTTCCGGCACAAAAA 59.566 39.130 10.75 10.75 32.93 1.94
1661 2194 1.464734 TCACAACTTTTTCCGGCACA 58.535 45.000 0.00 0.00 0.00 4.57
1662 2195 2.793278 ATCACAACTTTTTCCGGCAC 57.207 45.000 0.00 0.00 0.00 5.01
1707 2246 3.361281 TGCAAGGAGAGCATCAGAAAT 57.639 42.857 0.00 0.00 37.02 2.17
1708 2247 2.865119 TGCAAGGAGAGCATCAGAAA 57.135 45.000 0.00 0.00 37.02 2.52
1745 2284 2.164624 GAGGAGCGAGTGTACTGTCAAT 59.835 50.000 0.00 0.00 0.00 2.57
1750 2289 1.025113 TCGGAGGAGCGAGTGTACTG 61.025 60.000 0.00 0.00 0.00 2.74
1752 2291 0.029567 CATCGGAGGAGCGAGTGTAC 59.970 60.000 0.00 0.00 0.00 2.90
1754 2293 3.069980 GCATCGGAGGAGCGAGTGT 62.070 63.158 0.00 0.00 0.00 3.55
1776 2315 9.159364 ACGTATTTTACTCCATTTTCTAACTCC 57.841 33.333 0.00 0.00 0.00 3.85
1800 2340 4.124851 ACTGGCCACTTAATCTTCTACG 57.875 45.455 0.00 0.00 0.00 3.51
1810 2350 5.128171 CAGTACCACTAATACTGGCCACTTA 59.872 44.000 0.00 0.00 43.88 2.24
1869 2409 5.824429 GCATGCTGCAAGTAGATTTGAATA 58.176 37.500 11.37 0.00 44.26 1.75
1925 2465 0.321671 GCTGTACCTGAACTCCAGCA 59.678 55.000 5.16 0.00 45.94 4.41
1945 2485 1.675483 AGCAGAGTCGATAGCTGAGTG 59.325 52.381 13.97 0.00 35.72 3.51
1954 2494 0.392193 CAGGCCAAAGCAGAGTCGAT 60.392 55.000 5.01 0.00 42.56 3.59
1955 2495 1.004560 CAGGCCAAAGCAGAGTCGA 60.005 57.895 5.01 0.00 42.56 4.20
1981 2521 1.005394 GGAGTGCCGAAACTTCCGA 60.005 57.895 0.00 0.00 0.00 4.55
1982 2522 3.562635 GGAGTGCCGAAACTTCCG 58.437 61.111 0.00 0.00 0.00 4.30
2014 2555 6.710744 GGTAGAAACCATTGAAGAAAGACAGA 59.289 38.462 0.00 0.00 45.98 3.41
2050 2591 5.796424 AGTTGGACATGATGAAAGCTTTT 57.204 34.783 14.05 0.00 0.00 2.27
2051 2592 5.302568 TGAAGTTGGACATGATGAAAGCTTT 59.697 36.000 12.53 12.53 0.00 3.51
2052 2593 4.828939 TGAAGTTGGACATGATGAAAGCTT 59.171 37.500 0.00 0.00 0.00 3.74
2053 2594 4.401022 TGAAGTTGGACATGATGAAAGCT 58.599 39.130 0.00 0.00 0.00 3.74
2054 2595 4.771590 TGAAGTTGGACATGATGAAAGC 57.228 40.909 0.00 0.00 0.00 3.51
2055 2596 5.706916 CCTTGAAGTTGGACATGATGAAAG 58.293 41.667 0.00 0.00 0.00 2.62
2056 2597 4.022068 GCCTTGAAGTTGGACATGATGAAA 60.022 41.667 0.00 0.00 0.00 2.69
2057 2598 3.507233 GCCTTGAAGTTGGACATGATGAA 59.493 43.478 0.00 0.00 0.00 2.57
2058 2599 3.084039 GCCTTGAAGTTGGACATGATGA 58.916 45.455 0.00 0.00 0.00 2.92
2059 2600 2.821378 TGCCTTGAAGTTGGACATGATG 59.179 45.455 0.00 0.00 0.00 3.07
2060 2601 2.821969 GTGCCTTGAAGTTGGACATGAT 59.178 45.455 0.00 0.00 0.00 2.45
2061 2602 2.229792 GTGCCTTGAAGTTGGACATGA 58.770 47.619 0.00 0.00 0.00 3.07
2062 2603 1.955778 TGTGCCTTGAAGTTGGACATG 59.044 47.619 0.00 0.00 0.00 3.21
2063 2604 2.363306 TGTGCCTTGAAGTTGGACAT 57.637 45.000 0.00 0.00 0.00 3.06
2064 2605 2.363306 ATGTGCCTTGAAGTTGGACA 57.637 45.000 0.00 0.00 0.00 4.02
2065 2606 3.366374 GCTTATGTGCCTTGAAGTTGGAC 60.366 47.826 0.00 0.00 0.00 4.02
2066 2607 2.819608 GCTTATGTGCCTTGAAGTTGGA 59.180 45.455 0.00 0.00 0.00 3.53
2067 2608 2.821969 AGCTTATGTGCCTTGAAGTTGG 59.178 45.455 0.00 0.00 0.00 3.77
2068 2609 5.824904 ATAGCTTATGTGCCTTGAAGTTG 57.175 39.130 0.00 0.00 0.00 3.16
2069 2610 6.434028 TCAAATAGCTTATGTGCCTTGAAGTT 59.566 34.615 0.00 0.00 0.00 2.66
2070 2611 5.945784 TCAAATAGCTTATGTGCCTTGAAGT 59.054 36.000 0.00 0.00 0.00 3.01
2071 2612 6.441093 TCAAATAGCTTATGTGCCTTGAAG 57.559 37.500 0.00 0.00 0.00 3.02
2072 2613 7.408756 AATCAAATAGCTTATGTGCCTTGAA 57.591 32.000 0.00 0.00 33.45 2.69
2073 2614 7.408756 AAATCAAATAGCTTATGTGCCTTGA 57.591 32.000 0.00 0.00 33.89 3.02
2074 2615 7.380602 GCTAAATCAAATAGCTTATGTGCCTTG 59.619 37.037 0.00 0.00 41.98 3.61
2075 2616 7.428826 GCTAAATCAAATAGCTTATGTGCCTT 58.571 34.615 0.00 0.00 41.98 4.35
2076 2617 6.015940 GGCTAAATCAAATAGCTTATGTGCCT 60.016 38.462 0.00 0.00 44.13 4.75
2077 2618 6.015940 AGGCTAAATCAAATAGCTTATGTGCC 60.016 38.462 0.00 0.00 44.13 5.01
2078 2619 6.974965 AGGCTAAATCAAATAGCTTATGTGC 58.025 36.000 0.00 0.00 44.13 4.57
2079 2620 7.380602 GCAAGGCTAAATCAAATAGCTTATGTG 59.619 37.037 0.00 0.00 44.13 3.21
2080 2621 7.286316 AGCAAGGCTAAATCAAATAGCTTATGT 59.714 33.333 0.00 0.00 44.13 2.29
2081 2622 7.655490 AGCAAGGCTAAATCAAATAGCTTATG 58.345 34.615 0.00 0.00 44.13 1.90
2082 2623 7.040132 GGAGCAAGGCTAAATCAAATAGCTTAT 60.040 37.037 0.00 0.00 44.13 1.73
2083 2624 6.263168 GGAGCAAGGCTAAATCAAATAGCTTA 59.737 38.462 0.00 0.00 44.13 3.09
2084 2625 5.068329 GGAGCAAGGCTAAATCAAATAGCTT 59.932 40.000 0.00 0.00 44.13 3.74
2085 2626 4.582240 GGAGCAAGGCTAAATCAAATAGCT 59.418 41.667 5.62 0.00 44.13 3.32
2086 2627 4.261783 GGGAGCAAGGCTAAATCAAATAGC 60.262 45.833 0.00 0.00 43.99 2.97
2087 2628 4.023707 CGGGAGCAAGGCTAAATCAAATAG 60.024 45.833 0.00 0.00 39.88 1.73
2088 2629 3.882888 CGGGAGCAAGGCTAAATCAAATA 59.117 43.478 0.00 0.00 39.88 1.40
2089 2630 2.689983 CGGGAGCAAGGCTAAATCAAAT 59.310 45.455 0.00 0.00 39.88 2.32
2090 2631 2.091541 CGGGAGCAAGGCTAAATCAAA 58.908 47.619 0.00 0.00 39.88 2.69
2091 2632 1.004277 ACGGGAGCAAGGCTAAATCAA 59.996 47.619 0.00 0.00 39.88 2.57
2092 2633 0.618458 ACGGGAGCAAGGCTAAATCA 59.382 50.000 0.00 0.00 39.88 2.57
2093 2634 1.671328 GAACGGGAGCAAGGCTAAATC 59.329 52.381 0.00 0.00 39.88 2.17
2094 2635 1.004277 TGAACGGGAGCAAGGCTAAAT 59.996 47.619 0.00 0.00 39.88 1.40
2095 2636 0.398696 TGAACGGGAGCAAGGCTAAA 59.601 50.000 0.00 0.00 39.88 1.85
2096 2637 0.618458 ATGAACGGGAGCAAGGCTAA 59.382 50.000 0.00 0.00 39.88 3.09
2097 2638 1.491668 TATGAACGGGAGCAAGGCTA 58.508 50.000 0.00 0.00 39.88 3.93
2098 2639 0.618458 TTATGAACGGGAGCAAGGCT 59.382 50.000 0.00 0.00 43.88 4.58
2099 2640 1.459450 TTTATGAACGGGAGCAAGGC 58.541 50.000 0.00 0.00 0.00 4.35
2100 2641 3.734902 GCATTTTATGAACGGGAGCAAGG 60.735 47.826 0.00 0.00 0.00 3.61
2101 2642 3.119531 TGCATTTTATGAACGGGAGCAAG 60.120 43.478 0.00 0.00 0.00 4.01
2102 2643 2.822561 TGCATTTTATGAACGGGAGCAA 59.177 40.909 0.00 0.00 0.00 3.91
2103 2644 2.441410 TGCATTTTATGAACGGGAGCA 58.559 42.857 0.00 0.00 0.00 4.26
2104 2645 3.502191 TTGCATTTTATGAACGGGAGC 57.498 42.857 0.00 0.00 0.00 4.70
2105 2646 4.804108 TGTTTGCATTTTATGAACGGGAG 58.196 39.130 0.00 0.00 0.00 4.30
2106 2647 4.855715 TGTTTGCATTTTATGAACGGGA 57.144 36.364 0.00 0.00 0.00 5.14
2107 2648 5.636965 TGATTGTTTGCATTTTATGAACGGG 59.363 36.000 0.00 0.00 0.00 5.28
2108 2649 6.702972 TGATTGTTTGCATTTTATGAACGG 57.297 33.333 0.00 0.00 0.00 4.44
2109 2650 8.533965 CCTATGATTGTTTGCATTTTATGAACG 58.466 33.333 0.00 0.00 0.00 3.95
2110 2651 8.330302 GCCTATGATTGTTTGCATTTTATGAAC 58.670 33.333 0.00 0.00 0.00 3.18
2111 2652 8.039538 TGCCTATGATTGTTTGCATTTTATGAA 58.960 29.630 0.00 0.00 0.00 2.57
2112 2653 7.492020 GTGCCTATGATTGTTTGCATTTTATGA 59.508 33.333 0.00 0.00 0.00 2.15
2113 2654 7.278203 TGTGCCTATGATTGTTTGCATTTTATG 59.722 33.333 0.00 0.00 0.00 1.90
2114 2655 7.329499 TGTGCCTATGATTGTTTGCATTTTAT 58.671 30.769 0.00 0.00 0.00 1.40
2115 2656 6.695429 TGTGCCTATGATTGTTTGCATTTTA 58.305 32.000 0.00 0.00 0.00 1.52
2116 2657 5.549347 TGTGCCTATGATTGTTTGCATTTT 58.451 33.333 0.00 0.00 0.00 1.82
2117 2658 5.149973 TGTGCCTATGATTGTTTGCATTT 57.850 34.783 0.00 0.00 0.00 2.32
2118 2659 4.804868 TGTGCCTATGATTGTTTGCATT 57.195 36.364 0.00 0.00 0.00 3.56
2119 2660 6.468333 TTATGTGCCTATGATTGTTTGCAT 57.532 33.333 0.00 0.00 0.00 3.96
2120 2661 5.911378 TTATGTGCCTATGATTGTTTGCA 57.089 34.783 0.00 0.00 0.00 4.08
2121 2662 6.275335 ACATTATGTGCCTATGATTGTTTGC 58.725 36.000 0.00 0.00 0.00 3.68
2122 2663 9.970395 ATAACATTATGTGCCTATGATTGTTTG 57.030 29.630 0.00 0.00 0.00 2.93
2124 2665 9.578576 AGATAACATTATGTGCCTATGATTGTT 57.421 29.630 0.00 0.00 0.00 2.83
2125 2666 9.006839 CAGATAACATTATGTGCCTATGATTGT 57.993 33.333 0.00 0.00 29.38 2.71
2126 2667 9.006839 ACAGATAACATTATGTGCCTATGATTG 57.993 33.333 0.00 0.00 37.79 2.67
2127 2668 9.006839 CACAGATAACATTATGTGCCTATGATT 57.993 33.333 0.00 0.00 37.79 2.57
2128 2669 8.377799 TCACAGATAACATTATGTGCCTATGAT 58.622 33.333 0.00 0.00 42.15 2.45
2129 2670 7.734942 TCACAGATAACATTATGTGCCTATGA 58.265 34.615 0.00 0.00 42.15 2.15
2130 2671 7.967890 TCACAGATAACATTATGTGCCTATG 57.032 36.000 0.00 0.00 42.15 2.23
2131 2672 8.377799 TGATCACAGATAACATTATGTGCCTAT 58.622 33.333 0.00 0.00 42.15 2.57
2132 2673 7.734942 TGATCACAGATAACATTATGTGCCTA 58.265 34.615 0.00 0.00 42.15 3.93
2133 2674 6.594744 TGATCACAGATAACATTATGTGCCT 58.405 36.000 0.00 0.00 42.15 4.75
2134 2675 6.866010 TGATCACAGATAACATTATGTGCC 57.134 37.500 0.00 0.00 42.15 5.01
2135 2676 7.012704 AGGTTGATCACAGATAACATTATGTGC 59.987 37.037 0.00 0.00 42.15 4.57
2136 2677 8.340443 CAGGTTGATCACAGATAACATTATGTG 58.660 37.037 0.00 7.12 43.44 3.21
2137 2678 7.012704 GCAGGTTGATCACAGATAACATTATGT 59.987 37.037 0.00 0.00 0.00 2.29
2138 2679 7.358066 GCAGGTTGATCACAGATAACATTATG 58.642 38.462 0.00 0.00 0.00 1.90
2139 2680 6.488006 GGCAGGTTGATCACAGATAACATTAT 59.512 38.462 0.00 0.00 0.00 1.28
2140 2681 5.822519 GGCAGGTTGATCACAGATAACATTA 59.177 40.000 0.00 0.00 0.00 1.90
2141 2682 4.641989 GGCAGGTTGATCACAGATAACATT 59.358 41.667 0.00 0.00 0.00 2.71
2142 2683 4.202441 GGCAGGTTGATCACAGATAACAT 58.798 43.478 0.00 0.00 0.00 2.71
2143 2684 3.609853 GGCAGGTTGATCACAGATAACA 58.390 45.455 0.00 0.00 0.00 2.41
2144 2685 2.945668 GGGCAGGTTGATCACAGATAAC 59.054 50.000 0.00 0.00 0.00 1.89
2145 2686 2.575735 TGGGCAGGTTGATCACAGATAA 59.424 45.455 0.00 0.00 0.00 1.75
2146 2687 2.171237 CTGGGCAGGTTGATCACAGATA 59.829 50.000 0.00 0.00 0.00 1.98
2147 2688 0.994247 TGGGCAGGTTGATCACAGAT 59.006 50.000 0.00 0.00 0.00 2.90
2148 2689 0.325933 CTGGGCAGGTTGATCACAGA 59.674 55.000 0.00 0.00 0.00 3.41
2149 2690 0.325933 TCTGGGCAGGTTGATCACAG 59.674 55.000 0.00 0.00 0.00 3.66
2150 2691 0.770499 TTCTGGGCAGGTTGATCACA 59.230 50.000 0.00 0.00 0.00 3.58
2151 2692 1.168714 GTTCTGGGCAGGTTGATCAC 58.831 55.000 0.00 0.00 0.00 3.06
2152 2693 0.770499 TGTTCTGGGCAGGTTGATCA 59.230 50.000 0.00 0.00 0.00 2.92
2153 2694 1.909700 TTGTTCTGGGCAGGTTGATC 58.090 50.000 0.00 0.00 0.00 2.92
2154 2695 1.963515 GTTTGTTCTGGGCAGGTTGAT 59.036 47.619 0.00 0.00 0.00 2.57
2155 2696 1.341482 TGTTTGTTCTGGGCAGGTTGA 60.341 47.619 0.00 0.00 0.00 3.18
2156 2697 1.110442 TGTTTGTTCTGGGCAGGTTG 58.890 50.000 0.00 0.00 0.00 3.77
2157 2698 1.111277 GTGTTTGTTCTGGGCAGGTT 58.889 50.000 0.00 0.00 0.00 3.50
2158 2699 0.258774 AGTGTTTGTTCTGGGCAGGT 59.741 50.000 0.00 0.00 0.00 4.00
2159 2700 0.670162 CAGTGTTTGTTCTGGGCAGG 59.330 55.000 0.00 0.00 0.00 4.85
2160 2701 1.334869 GTCAGTGTTTGTTCTGGGCAG 59.665 52.381 0.00 0.00 33.13 4.85
2161 2702 1.064758 AGTCAGTGTTTGTTCTGGGCA 60.065 47.619 0.00 0.00 33.13 5.36
2162 2703 1.334869 CAGTCAGTGTTTGTTCTGGGC 59.665 52.381 0.00 0.00 33.13 5.36
2163 2704 2.643551 ACAGTCAGTGTTTGTTCTGGG 58.356 47.619 0.00 0.00 34.94 4.45
2171 2712 7.310921 ATCATATCTGAGGAACAGTCAGTGTTT 60.311 37.037 0.00 0.00 41.37 2.83
2172 2713 6.155910 ATCATATCTGAGGAACAGTCAGTGTT 59.844 38.462 0.00 0.00 42.87 3.32
2173 2714 5.019470 TCATATCTGAGGAACAGTCAGTGT 58.981 41.667 0.00 0.00 45.86 3.55
2174 2715 5.588958 TCATATCTGAGGAACAGTCAGTG 57.411 43.478 0.00 0.00 45.86 3.66
2175 2716 5.660417 ACATCATATCTGAGGAACAGTCAGT 59.340 40.000 0.00 0.00 45.86 3.41
2176 2717 5.984323 CACATCATATCTGAGGAACAGTCAG 59.016 44.000 0.00 0.00 45.86 3.51
2177 2718 5.423290 ACACATCATATCTGAGGAACAGTCA 59.577 40.000 0.00 0.00 45.86 3.41
2178 2719 5.752472 CACACATCATATCTGAGGAACAGTC 59.248 44.000 0.00 0.00 45.86 3.51
2179 2720 5.396101 CCACACATCATATCTGAGGAACAGT 60.396 44.000 0.00 0.00 45.86 3.55
2180 2721 5.055144 CCACACATCATATCTGAGGAACAG 58.945 45.833 0.00 0.00 46.97 3.16
2181 2722 4.471025 ACCACACATCATATCTGAGGAACA 59.529 41.667 0.00 0.00 36.68 3.18
2182 2723 5.028549 ACCACACATCATATCTGAGGAAC 57.971 43.478 0.00 0.00 36.68 3.62
2183 2724 5.305386 CCTACCACACATCATATCTGAGGAA 59.695 44.000 0.00 0.00 36.68 3.36
2184 2725 4.835056 CCTACCACACATCATATCTGAGGA 59.165 45.833 0.00 0.00 36.68 3.71
2185 2726 4.835056 TCCTACCACACATCATATCTGAGG 59.165 45.833 0.00 0.00 39.09 3.86
2186 2727 6.210185 TCATCCTACCACACATCATATCTGAG 59.790 42.308 0.00 0.00 34.12 3.35
2187 2728 6.077322 TCATCCTACCACACATCATATCTGA 58.923 40.000 0.00 0.00 35.41 3.27
2188 2729 6.350629 TCATCCTACCACACATCATATCTG 57.649 41.667 0.00 0.00 0.00 2.90
2189 2730 7.565190 AATCATCCTACCACACATCATATCT 57.435 36.000 0.00 0.00 0.00 1.98
2190 2731 8.509690 CAAAATCATCCTACCACACATCATATC 58.490 37.037 0.00 0.00 0.00 1.63
2191 2732 8.219868 TCAAAATCATCCTACCACACATCATAT 58.780 33.333 0.00 0.00 0.00 1.78
2192 2733 7.572814 TCAAAATCATCCTACCACACATCATA 58.427 34.615 0.00 0.00 0.00 2.15
2193 2734 6.425735 TCAAAATCATCCTACCACACATCAT 58.574 36.000 0.00 0.00 0.00 2.45
2194 2735 5.814481 TCAAAATCATCCTACCACACATCA 58.186 37.500 0.00 0.00 0.00 3.07
2195 2736 5.220931 GCTCAAAATCATCCTACCACACATC 60.221 44.000 0.00 0.00 0.00 3.06
2196 2737 4.641989 GCTCAAAATCATCCTACCACACAT 59.358 41.667 0.00 0.00 0.00 3.21
2197 2738 4.009675 GCTCAAAATCATCCTACCACACA 58.990 43.478 0.00 0.00 0.00 3.72
2198 2739 3.378427 GGCTCAAAATCATCCTACCACAC 59.622 47.826 0.00 0.00 0.00 3.82
2199 2740 3.266772 AGGCTCAAAATCATCCTACCACA 59.733 43.478 0.00 0.00 0.00 4.17
2200 2741 3.629398 CAGGCTCAAAATCATCCTACCAC 59.371 47.826 0.00 0.00 0.00 4.16
2201 2742 3.266772 ACAGGCTCAAAATCATCCTACCA 59.733 43.478 0.00 0.00 0.00 3.25
2202 2743 3.891049 ACAGGCTCAAAATCATCCTACC 58.109 45.455 0.00 0.00 0.00 3.18
2203 2744 5.644644 CAAACAGGCTCAAAATCATCCTAC 58.355 41.667 0.00 0.00 0.00 3.18
2204 2745 4.158394 GCAAACAGGCTCAAAATCATCCTA 59.842 41.667 0.00 0.00 0.00 2.94
2205 2746 3.056322 GCAAACAGGCTCAAAATCATCCT 60.056 43.478 0.00 0.00 0.00 3.24
2206 2747 3.256558 GCAAACAGGCTCAAAATCATCC 58.743 45.455 0.00 0.00 0.00 3.51
2207 2748 3.916761 TGCAAACAGGCTCAAAATCATC 58.083 40.909 0.00 0.00 34.04 2.92
2208 2749 4.339872 TTGCAAACAGGCTCAAAATCAT 57.660 36.364 0.00 0.00 34.04 2.45
2209 2750 3.815856 TTGCAAACAGGCTCAAAATCA 57.184 38.095 0.00 0.00 34.04 2.57
2223 2764 3.865011 TGCTTCTGAAGTTGTTGCAAA 57.135 38.095 17.97 0.00 0.00 3.68
2224 2765 3.865011 TTGCTTCTGAAGTTGTTGCAA 57.135 38.095 17.97 12.62 36.74 4.08
2225 2766 4.389890 AATTGCTTCTGAAGTTGTTGCA 57.610 36.364 17.97 7.38 0.00 4.08
2226 2767 4.805192 TCAAATTGCTTCTGAAGTTGTTGC 59.195 37.500 17.97 4.86 31.85 4.17
2227 2768 6.890663 TTCAAATTGCTTCTGAAGTTGTTG 57.109 33.333 17.97 15.54 31.85 3.33
2228 2769 7.903995 TTTTCAAATTGCTTCTGAAGTTGTT 57.096 28.000 17.97 8.04 31.85 2.83
2229 2770 7.903995 TTTTTCAAATTGCTTCTGAAGTTGT 57.096 28.000 17.97 2.58 31.85 3.32
2274 2815 9.859427 GATGAACTTTTTCCAAATCATGTGATA 57.141 29.630 0.00 0.00 33.73 2.15
2275 2816 7.543172 CGATGAACTTTTTCCAAATCATGTGAT 59.457 33.333 0.00 0.00 36.07 3.06
2276 2817 6.862608 CGATGAACTTTTTCCAAATCATGTGA 59.137 34.615 0.00 0.00 26.62 3.58
2277 2818 6.862608 TCGATGAACTTTTTCCAAATCATGTG 59.137 34.615 0.00 0.00 26.62 3.21
2278 2819 6.980593 TCGATGAACTTTTTCCAAATCATGT 58.019 32.000 0.00 0.00 26.62 3.21
2279 2820 8.470040 AATCGATGAACTTTTTCCAAATCATG 57.530 30.769 0.00 0.00 26.62 3.07
2280 2821 9.492973 AAAATCGATGAACTTTTTCCAAATCAT 57.507 25.926 0.00 0.00 28.34 2.45
2281 2822 8.763356 CAAAATCGATGAACTTTTTCCAAATCA 58.237 29.630 0.00 0.00 0.00 2.57
2282 2823 8.977505 TCAAAATCGATGAACTTTTTCCAAATC 58.022 29.630 0.00 0.00 0.00 2.17
2283 2824 8.885494 TCAAAATCGATGAACTTTTTCCAAAT 57.115 26.923 0.00 0.00 0.00 2.32
2284 2825 8.709386 TTCAAAATCGATGAACTTTTTCCAAA 57.291 26.923 0.00 0.00 32.10 3.28
2285 2826 8.709386 TTTCAAAATCGATGAACTTTTTCCAA 57.291 26.923 0.00 0.00 36.57 3.53
2286 2827 8.709386 TTTTCAAAATCGATGAACTTTTTCCA 57.291 26.923 0.00 0.00 36.57 3.53
2376 2917 9.706691 CACCAAGATTAAAACTAGTCAACTAGA 57.293 33.333 21.08 1.80 46.80 2.43
2379 2920 9.003658 CATCACCAAGATTAAAACTAGTCAACT 57.996 33.333 0.00 0.00 33.72 3.16
2380 2921 8.999431 TCATCACCAAGATTAAAACTAGTCAAC 58.001 33.333 0.00 0.00 33.72 3.18
2381 2922 8.999431 GTCATCACCAAGATTAAAACTAGTCAA 58.001 33.333 0.00 0.00 33.72 3.18
2382 2923 7.606456 GGTCATCACCAAGATTAAAACTAGTCA 59.394 37.037 0.00 0.00 43.17 3.41
2383 2924 7.824779 AGGTCATCACCAAGATTAAAACTAGTC 59.175 37.037 0.00 0.00 46.68 2.59
2384 2925 7.607991 CAGGTCATCACCAAGATTAAAACTAGT 59.392 37.037 0.00 0.00 46.68 2.57
2385 2926 7.414540 GCAGGTCATCACCAAGATTAAAACTAG 60.415 40.741 0.00 0.00 46.68 2.57
2386 2927 6.374333 GCAGGTCATCACCAAGATTAAAACTA 59.626 38.462 0.00 0.00 46.68 2.24
2387 2928 5.183904 GCAGGTCATCACCAAGATTAAAACT 59.816 40.000 0.00 0.00 46.68 2.66
2388 2929 5.183904 AGCAGGTCATCACCAAGATTAAAAC 59.816 40.000 0.00 0.00 46.68 2.43
2389 2930 5.183713 CAGCAGGTCATCACCAAGATTAAAA 59.816 40.000 0.00 0.00 46.68 1.52
2390 2931 4.701651 CAGCAGGTCATCACCAAGATTAAA 59.298 41.667 0.00 0.00 46.68 1.52
2391 2932 4.264253 CAGCAGGTCATCACCAAGATTAA 58.736 43.478 0.00 0.00 46.68 1.40
2392 2933 3.370846 CCAGCAGGTCATCACCAAGATTA 60.371 47.826 0.00 0.00 46.68 1.75
2393 2934 2.619849 CCAGCAGGTCATCACCAAGATT 60.620 50.000 0.00 0.00 46.68 2.40
2394 2935 1.064906 CCAGCAGGTCATCACCAAGAT 60.065 52.381 0.00 0.00 46.68 2.40
2395 2936 0.325933 CCAGCAGGTCATCACCAAGA 59.674 55.000 0.00 0.00 46.68 3.02
2396 2937 0.679002 CCCAGCAGGTCATCACCAAG 60.679 60.000 0.00 0.00 46.68 3.61
2397 2938 1.379916 CCCAGCAGGTCATCACCAA 59.620 57.895 0.00 0.00 46.68 3.67
2398 2939 2.605607 CCCCAGCAGGTCATCACCA 61.606 63.158 0.00 0.00 46.68 4.17
2399 2940 2.273449 CCCCAGCAGGTCATCACC 59.727 66.667 0.00 0.00 44.19 4.02
2400 2941 2.439156 GCCCCAGCAGGTCATCAC 60.439 66.667 0.00 0.00 39.53 3.06
2401 2942 2.233566 AAGCCCCAGCAGGTCATCA 61.234 57.895 0.00 0.00 43.56 3.07
2402 2943 1.751927 CAAGCCCCAGCAGGTCATC 60.752 63.158 0.00 0.00 43.56 2.92
2403 2944 2.085343 AACAAGCCCCAGCAGGTCAT 62.085 55.000 0.00 0.00 43.56 3.06
2404 2945 2.296945 AAACAAGCCCCAGCAGGTCA 62.297 55.000 0.00 0.00 43.56 4.02
2405 2946 1.115326 AAAACAAGCCCCAGCAGGTC 61.115 55.000 0.00 0.00 43.56 3.85
2406 2947 1.075301 AAAACAAGCCCCAGCAGGT 60.075 52.632 0.00 0.00 43.56 4.00
2407 2948 1.667722 GAAAACAAGCCCCAGCAGG 59.332 57.895 0.00 0.00 43.56 4.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.