Multiple sequence alignment - TraesCS4B01G017200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G017200 chr4B 100.000 3688 0 0 1 3688 12250657 12254344 0.000000e+00 6811.0
1 TraesCS4B01G017200 chr4B 87.879 66 5 3 495 558 560241635 560241699 1.420000e-09 75.0
2 TraesCS4B01G017200 chr4B 89.796 49 4 1 3543 3590 619330707 619330659 1.110000e-05 62.1
3 TraesCS4B01G017200 chr4A 86.867 1462 93 51 840 2250 596571995 596570582 0.000000e+00 1544.0
4 TraesCS4B01G017200 chr4A 81.061 396 58 9 257 640 596572878 596572488 2.150000e-77 300.0
5 TraesCS4B01G017200 chr4A 77.815 302 43 20 344 640 596572410 596572128 8.190000e-37 165.0
6 TraesCS4B01G017200 chr4A 95.000 40 2 0 2927 2966 596570071 596570032 3.070000e-06 63.9
7 TraesCS4B01G017200 chr4D 94.516 1003 46 4 963 1965 6969377 6970370 0.000000e+00 1539.0
8 TraesCS4B01G017200 chr4D 79.558 543 43 31 2538 3030 6970897 6971421 3.550000e-85 326.0
9 TraesCS4B01G017200 chr4D 82.919 322 45 10 1 315 6967360 6967678 7.800000e-72 281.0
10 TraesCS4B01G017200 chr4D 86.864 236 19 4 3225 3459 6971528 6971752 1.700000e-63 254.0
11 TraesCS4B01G017200 chr4D 90.598 117 10 1 3076 3192 6971429 6971544 1.770000e-33 154.0
12 TraesCS4B01G017200 chr4D 90.566 53 5 0 1927 1979 6970383 6970435 1.840000e-08 71.3
13 TraesCS4B01G017200 chr1B 84.772 591 44 18 1927 2515 616963509 616964055 5.380000e-153 551.0
14 TraesCS4B01G017200 chr1B 84.563 583 48 18 1932 2513 616956621 616956080 1.170000e-149 540.0
15 TraesCS4B01G017200 chr1B 85.312 320 30 8 1703 2021 616963234 616963537 7.690000e-82 315.0
16 TraesCS4B01G017200 chr1B 92.553 94 7 0 1703 1796 616958810 616958717 6.420000e-28 135.0
17 TraesCS4B01G017200 chr1B 89.423 104 11 0 3585 3688 429704489 429704592 8.310000e-27 132.0
18 TraesCS4B01G017200 chr3D 94.444 288 16 0 1425 1712 442751279 442750992 9.400000e-121 444.0
19 TraesCS4B01G017200 chr3D 90.000 50 5 0 1930 1979 442750920 442750871 8.550000e-07 65.8
20 TraesCS4B01G017200 chrUn 94.681 94 5 0 3595 3688 95417394 95417301 2.970000e-31 147.0
21 TraesCS4B01G017200 chr5B 93.814 97 6 0 3592 3688 78440918 78441014 2.970000e-31 147.0
22 TraesCS4B01G017200 chr5B 95.294 85 4 0 3604 3688 234173332 234173248 6.420000e-28 135.0
23 TraesCS4B01G017200 chr5B 91.667 96 7 1 1060 1154 15271308 15271403 8.310000e-27 132.0
24 TraesCS4B01G017200 chr5D 90.741 108 9 1 3582 3688 16589351 16589244 3.840000e-30 143.0
25 TraesCS4B01G017200 chr2D 94.565 92 5 0 3597 3688 324863272 324863363 3.840000e-30 143.0
26 TraesCS4B01G017200 chr2D 92.000 100 8 0 3588 3687 543457802 543457901 1.380000e-29 141.0
27 TraesCS4B01G017200 chr2D 92.553 94 7 0 3595 3688 428622529 428622436 6.420000e-28 135.0
28 TraesCS4B01G017200 chr1D 92.079 101 8 0 3588 3688 56232669 56232569 3.840000e-30 143.0
29 TraesCS4B01G017200 chr5A 91.667 96 7 1 1060 1154 14923184 14923089 8.310000e-27 132.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G017200 chr4B 12250657 12254344 3687 False 6811.000 6811 100.00000 1 3688 1 chr4B.!!$F1 3687
1 TraesCS4B01G017200 chr4A 596570032 596572878 2846 True 518.225 1544 85.18575 257 2966 4 chr4A.!!$R1 2709
2 TraesCS4B01G017200 chr4D 6967360 6971752 4392 False 437.550 1539 87.50350 1 3459 6 chr4D.!!$F1 3458
3 TraesCS4B01G017200 chr1B 616963234 616964055 821 False 433.000 551 85.04200 1703 2515 2 chr1B.!!$F2 812
4 TraesCS4B01G017200 chr1B 616956080 616958810 2730 True 337.500 540 88.55800 1703 2513 2 chr1B.!!$R1 810

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
31 32 0.102844 TGCCTTGCTGCTTTTGTCAC 59.897 50.0 0.00 0.0 0.00 3.67 F
650 1462 0.105408 AGGTAAATCGCGGGCGTAAT 59.895 50.0 13.21 0.0 40.74 1.89 F
652 1464 0.160182 GTAAATCGCGGGCGTAATCG 59.840 55.0 13.21 0.0 40.74 3.34 F
2305 5529 0.107214 TTAGAGCTTTCCATGGCGGG 60.107 55.0 6.96 0.0 34.36 6.13 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1728 2911 0.038166 TCCGGCCTCTCTGCAATTTT 59.962 50.0 0.00 0.0 0.00 1.82 R
2279 5503 0.249398 TGGAAAGCTCTAACCGCCTC 59.751 55.0 0.00 0.0 0.00 4.70 R
2446 5681 0.250038 ATCAGGGATCACGGAATGCG 60.250 55.0 0.75 0.0 0.00 4.73 R
3199 6555 0.033208 TGGATTCCAGCCCAATCACC 60.033 55.0 0.00 0.0 32.65 4.02 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 3.127533 CCCGCTACACTGCCTTGC 61.128 66.667 0.00 0.00 0.00 4.01
25 26 1.242076 CTACACTGCCTTGCTGCTTT 58.758 50.000 0.00 0.00 0.00 3.51
26 27 1.610522 CTACACTGCCTTGCTGCTTTT 59.389 47.619 0.00 0.00 0.00 2.27
29 30 0.386838 ACTGCCTTGCTGCTTTTGTC 59.613 50.000 0.00 0.00 0.00 3.18
31 32 0.102844 TGCCTTGCTGCTTTTGTCAC 59.897 50.000 0.00 0.00 0.00 3.67
32 33 0.386838 GCCTTGCTGCTTTTGTCACT 59.613 50.000 0.00 0.00 0.00 3.41
33 34 1.866880 GCCTTGCTGCTTTTGTCACTG 60.867 52.381 0.00 0.00 0.00 3.66
47 48 1.188219 TCACTGGAGCTCCTTTCGCT 61.188 55.000 32.28 6.46 41.15 4.93
95 96 3.038417 CGCCAGATCCGCCGATTC 61.038 66.667 0.00 0.00 0.00 2.52
96 97 2.108976 GCCAGATCCGCCGATTCA 59.891 61.111 0.00 0.00 0.00 2.57
109 110 0.941463 CGATTCATCGCCTTCCCGAG 60.941 60.000 0.00 0.00 43.84 4.63
163 164 3.296709 GATCTCACGTGGCACGGGT 62.297 63.158 37.67 22.30 46.74 5.28
173 174 2.591715 GCACGGGTGAGCAAGTGT 60.592 61.111 2.38 0.00 36.99 3.55
175 176 1.724582 GCACGGGTGAGCAAGTGTTT 61.725 55.000 2.38 0.00 36.99 2.83
179 180 1.393539 CGGGTGAGCAAGTGTTTATCG 59.606 52.381 0.00 0.00 0.00 2.92
194 195 1.496060 TATCGGCCACCAACATCTCT 58.504 50.000 2.24 0.00 0.00 3.10
200 201 1.830477 GCCACCAACATCTCTCTCTCT 59.170 52.381 0.00 0.00 0.00 3.10
204 205 3.509184 CACCAACATCTCTCTCTCTCACA 59.491 47.826 0.00 0.00 0.00 3.58
205 206 3.509575 ACCAACATCTCTCTCTCTCACAC 59.490 47.826 0.00 0.00 0.00 3.82
206 207 3.509184 CCAACATCTCTCTCTCTCACACA 59.491 47.826 0.00 0.00 0.00 3.72
207 208 4.484236 CAACATCTCTCTCTCTCACACAC 58.516 47.826 0.00 0.00 0.00 3.82
209 210 3.505680 ACATCTCTCTCTCTCACACACAC 59.494 47.826 0.00 0.00 0.00 3.82
212 213 2.884012 CTCTCTCTCTCACACACACACT 59.116 50.000 0.00 0.00 0.00 3.55
213 214 4.068599 CTCTCTCTCTCACACACACACTA 58.931 47.826 0.00 0.00 0.00 2.74
215 216 2.554462 TCTCTCTCACACACACACTAGC 59.446 50.000 0.00 0.00 0.00 3.42
217 218 2.693074 TCTCTCACACACACACTAGCAA 59.307 45.455 0.00 0.00 0.00 3.91
218 219 3.321968 TCTCTCACACACACACTAGCAAT 59.678 43.478 0.00 0.00 0.00 3.56
219 220 3.392882 TCTCACACACACACTAGCAATG 58.607 45.455 0.00 0.00 0.00 2.82
233 234 5.931146 CACTAGCAATGAGAGAAAAGTGAGT 59.069 40.000 0.00 0.00 36.13 3.41
237 238 4.993584 GCAATGAGAGAAAAGTGAGTGAGA 59.006 41.667 0.00 0.00 0.00 3.27
241 242 8.566260 CAATGAGAGAAAAGTGAGTGAGATTTT 58.434 33.333 0.00 0.00 0.00 1.82
242 243 7.721286 TGAGAGAAAAGTGAGTGAGATTTTC 57.279 36.000 0.00 0.00 40.36 2.29
243 244 6.708054 TGAGAGAAAAGTGAGTGAGATTTTCC 59.292 38.462 5.82 0.00 40.74 3.13
244 245 6.836242 AGAGAAAAGTGAGTGAGATTTTCCT 58.164 36.000 5.82 1.78 40.74 3.36
246 247 7.777440 AGAGAAAAGTGAGTGAGATTTTCCTTT 59.223 33.333 5.82 0.00 40.74 3.11
247 248 8.298729 AGAAAAGTGAGTGAGATTTTCCTTTT 57.701 30.769 5.82 0.00 40.74 2.27
248 249 8.753133 AGAAAAGTGAGTGAGATTTTCCTTTTT 58.247 29.630 5.82 0.00 40.74 1.94
250 251 7.645058 AAGTGAGTGAGATTTTCCTTTTTGA 57.355 32.000 0.00 0.00 0.00 2.69
251 252 7.645058 AGTGAGTGAGATTTTCCTTTTTGAA 57.355 32.000 0.00 0.00 0.00 2.69
252 253 8.242729 AGTGAGTGAGATTTTCCTTTTTGAAT 57.757 30.769 0.00 0.00 0.00 2.57
253 254 8.699130 AGTGAGTGAGATTTTCCTTTTTGAATT 58.301 29.630 0.00 0.00 0.00 2.17
254 255 8.758715 GTGAGTGAGATTTTCCTTTTTGAATTG 58.241 33.333 0.00 0.00 0.00 2.32
255 256 7.927629 TGAGTGAGATTTTCCTTTTTGAATTGG 59.072 33.333 0.00 0.00 0.00 3.16
267 273 7.041107 CCTTTTTGAATTGGAAAGTGAGTGAA 58.959 34.615 0.00 0.00 0.00 3.18
304 310 6.560687 AGGGATAAGGATAGAGGAAAAAGGAG 59.439 42.308 0.00 0.00 0.00 3.69
325 761 1.371558 GAGCTCGTTCCCTGTGGTT 59.628 57.895 0.00 0.00 0.00 3.67
409 846 3.318275 AGAGCATTTGATGGCAGCTAATG 59.682 43.478 27.48 27.48 35.36 1.90
436 873 8.506437 CATTTGCTCCGAATTGCTATAAATCTA 58.494 33.333 0.00 0.00 0.00 1.98
437 874 7.658179 TTGCTCCGAATTGCTATAAATCTAG 57.342 36.000 0.00 0.00 0.00 2.43
458 895 8.365399 TCTAGCGTCAGATTTATAACATTTGG 57.635 34.615 0.00 0.00 0.00 3.28
509 961 9.734984 AATTCTATCTCCGGTTTTCTTAAGAAA 57.265 29.630 23.65 23.65 41.77 2.52
511 963 7.673180 TCTATCTCCGGTTTTCTTAAGAAACA 58.327 34.615 26.47 16.26 43.01 2.83
518 970 9.292195 TCCGGTTTTCTTAAGAAACATCTTAAT 57.708 29.630 26.47 0.00 43.01 1.40
560 1372 8.674263 ACTTGCCAAATAAAATCATGTTTTCA 57.326 26.923 2.31 0.00 0.00 2.69
561 1373 8.558700 ACTTGCCAAATAAAATCATGTTTTCAC 58.441 29.630 2.31 0.00 0.00 3.18
566 1378 7.172875 CCAAATAAAATCATGTTTTCACTGGCA 59.827 33.333 2.31 0.00 0.00 4.92
569 1381 6.607735 AAAATCATGTTTTCACTGGCAAAG 57.392 33.333 2.31 0.00 0.00 2.77
589 1401 2.763448 AGCCAACAAGTGCTTACCAAAA 59.237 40.909 0.00 0.00 32.94 2.44
590 1402 3.387699 AGCCAACAAGTGCTTACCAAAAT 59.612 39.130 0.00 0.00 32.94 1.82
593 1405 5.405269 GCCAACAAGTGCTTACCAAAATAAG 59.595 40.000 0.00 0.00 35.59 1.73
641 1453 8.911247 AGAATTTATTTTGACAGGTAAATCGC 57.089 30.769 0.00 0.00 0.00 4.58
642 1454 7.696453 AGAATTTATTTTGACAGGTAAATCGCG 59.304 33.333 0.00 0.00 0.00 5.87
643 1455 3.757745 ATTTTGACAGGTAAATCGCGG 57.242 42.857 6.13 0.00 0.00 6.46
644 1456 1.444836 TTTGACAGGTAAATCGCGGG 58.555 50.000 6.13 0.00 0.00 6.13
645 1457 1.022451 TTGACAGGTAAATCGCGGGC 61.022 55.000 6.13 0.00 0.00 6.13
646 1458 2.510691 ACAGGTAAATCGCGGGCG 60.511 61.111 6.13 6.74 41.35 6.13
647 1459 2.510691 CAGGTAAATCGCGGGCGT 60.511 61.111 13.21 0.00 40.74 5.68
648 1460 1.227031 CAGGTAAATCGCGGGCGTA 60.227 57.895 13.21 0.40 40.74 4.42
649 1461 0.806884 CAGGTAAATCGCGGGCGTAA 60.807 55.000 13.21 0.00 40.74 3.18
650 1462 0.105408 AGGTAAATCGCGGGCGTAAT 59.895 50.000 13.21 0.00 40.74 1.89
651 1463 0.509929 GGTAAATCGCGGGCGTAATC 59.490 55.000 13.21 1.96 40.74 1.75
652 1464 0.160182 GTAAATCGCGGGCGTAATCG 59.840 55.000 13.21 0.00 40.74 3.34
653 1465 0.248990 TAAATCGCGGGCGTAATCGT 60.249 50.000 13.21 0.00 40.74 3.73
654 1466 1.758319 AAATCGCGGGCGTAATCGTG 61.758 55.000 13.21 0.00 40.74 4.35
655 1467 2.894240 AATCGCGGGCGTAATCGTGT 62.894 55.000 13.21 0.00 40.74 4.49
656 1468 3.908951 CGCGGGCGTAATCGTGTG 61.909 66.667 4.64 0.00 39.49 3.82
657 1469 2.507547 GCGGGCGTAATCGTGTGA 60.508 61.111 0.00 0.00 39.49 3.58
658 1470 2.514013 GCGGGCGTAATCGTGTGAG 61.514 63.158 0.00 0.00 39.49 3.51
659 1471 1.138036 CGGGCGTAATCGTGTGAGA 59.862 57.895 0.00 0.00 39.49 3.27
660 1472 0.248907 CGGGCGTAATCGTGTGAGAT 60.249 55.000 0.00 0.00 39.49 2.75
661 1473 1.002142 CGGGCGTAATCGTGTGAGATA 60.002 52.381 0.00 0.00 39.49 1.98
662 1474 2.542205 CGGGCGTAATCGTGTGAGATAA 60.542 50.000 0.00 0.00 39.49 1.75
663 1475 3.050619 GGGCGTAATCGTGTGAGATAAG 58.949 50.000 0.00 0.00 39.49 1.73
664 1476 3.243301 GGGCGTAATCGTGTGAGATAAGA 60.243 47.826 0.00 0.00 39.49 2.10
665 1477 4.357142 GGCGTAATCGTGTGAGATAAGAA 58.643 43.478 0.00 0.00 39.49 2.52
666 1478 4.206609 GGCGTAATCGTGTGAGATAAGAAC 59.793 45.833 0.00 0.00 39.49 3.01
667 1479 4.796830 GCGTAATCGTGTGAGATAAGAACA 59.203 41.667 0.00 0.00 39.49 3.18
668 1480 5.052304 GCGTAATCGTGTGAGATAAGAACAG 60.052 44.000 0.00 0.00 39.49 3.16
672 1484 3.258372 TCGTGTGAGATAAGAACAGCCTT 59.742 43.478 0.00 0.00 0.00 4.35
678 1490 2.832129 AGATAAGAACAGCCTTCGTCCA 59.168 45.455 0.00 0.00 0.00 4.02
683 1495 1.734465 GAACAGCCTTCGTCCAGAATG 59.266 52.381 0.00 0.00 38.34 2.67
694 1506 1.996191 GTCCAGAATGAACTGTCGCTC 59.004 52.381 0.00 0.00 39.69 5.03
712 1524 4.575236 TCGCTCAAACGAGTGTATCTAGAT 59.425 41.667 10.73 10.73 41.04 1.98
713 1525 4.672862 CGCTCAAACGAGTGTATCTAGATG 59.327 45.833 15.79 0.00 36.47 2.90
714 1526 5.504173 CGCTCAAACGAGTGTATCTAGATGA 60.504 44.000 15.79 0.53 36.47 2.92
715 1527 5.683743 GCTCAAACGAGTGTATCTAGATGAC 59.316 44.000 15.79 11.37 32.72 3.06
746 1565 2.684881 ACAGCATATGCCAAACAGCTAC 59.315 45.455 23.96 0.00 43.38 3.58
747 1566 2.947652 CAGCATATGCCAAACAGCTACT 59.052 45.455 23.96 0.00 43.38 2.57
749 1568 2.291741 GCATATGCCAAACAGCTACTCC 59.708 50.000 17.26 0.00 34.31 3.85
751 1570 2.887151 ATGCCAAACAGCTACTCCTT 57.113 45.000 0.00 0.00 0.00 3.36
752 1571 2.656947 TGCCAAACAGCTACTCCTTT 57.343 45.000 0.00 0.00 0.00 3.11
753 1572 2.944129 TGCCAAACAGCTACTCCTTTT 58.056 42.857 0.00 0.00 0.00 2.27
754 1573 2.884639 TGCCAAACAGCTACTCCTTTTC 59.115 45.455 0.00 0.00 0.00 2.29
756 1575 3.570125 GCCAAACAGCTACTCCTTTTCTT 59.430 43.478 0.00 0.00 0.00 2.52
758 1577 4.216472 CCAAACAGCTACTCCTTTTCTTCC 59.784 45.833 0.00 0.00 0.00 3.46
759 1578 3.320673 ACAGCTACTCCTTTTCTTCCG 57.679 47.619 0.00 0.00 0.00 4.30
762 1581 3.433615 CAGCTACTCCTTTTCTTCCGTTG 59.566 47.826 0.00 0.00 0.00 4.10
772 1605 2.861462 TCTTCCGTTGCAAAAACAGG 57.139 45.000 0.00 0.01 0.00 4.00
799 1632 2.840651 ACACCTCCCATTCTTAGACCAG 59.159 50.000 0.00 0.00 0.00 4.00
810 1643 4.008074 TCTTAGACCAGAAGCCAACAAG 57.992 45.455 0.00 0.00 0.00 3.16
811 1644 3.646162 TCTTAGACCAGAAGCCAACAAGA 59.354 43.478 0.00 0.00 0.00 3.02
832 1665 2.349297 ACGCACGGAAAACAAAACAA 57.651 40.000 0.00 0.00 0.00 2.83
840 1673 6.031938 GCACGGAAAACAAAACAAAAATGTTC 59.968 34.615 0.00 0.00 36.33 3.18
841 1674 6.521477 CACGGAAAACAAAACAAAAATGTTCC 59.479 34.615 0.00 0.00 36.33 3.62
864 1710 1.662686 CCTCCCACTTCCTCTTCCTT 58.337 55.000 0.00 0.00 0.00 3.36
865 1711 1.557371 CCTCCCACTTCCTCTTCCTTC 59.443 57.143 0.00 0.00 0.00 3.46
873 1721 4.471386 CACTTCCTCTTCCTTCCTATTCCA 59.529 45.833 0.00 0.00 0.00 3.53
911 1759 3.953775 ACCAACCCAGAGCACCCG 61.954 66.667 0.00 0.00 0.00 5.28
1536 2719 1.587054 GGAGCTGGATATCGACGGG 59.413 63.158 0.00 0.00 0.00 5.28
1571 2754 3.934962 GATCCGGGAGCTGGAGGC 61.935 72.222 4.74 0.00 42.74 4.70
1707 2890 4.194720 CCGAGGAAGAGGTCGCCG 62.195 72.222 0.00 0.00 34.78 6.46
1726 2909 1.694169 TGGAGGAAGCTGATCCCCC 60.694 63.158 9.07 4.13 40.59 5.40
1728 2911 1.762460 GAGGAAGCTGATCCCCCGA 60.762 63.158 0.53 0.00 40.59 5.14
1827 4919 0.687757 AGGTCAGCCTAGCGGATTCA 60.688 55.000 0.00 0.00 44.90 2.57
1910 5002 2.887360 CCAAGCGAATGCCAAGGG 59.113 61.111 0.00 0.00 44.31 3.95
1915 5007 2.998097 CGAATGCCAAGGGGGAGA 59.002 61.111 0.00 0.00 38.23 3.71
1979 5122 4.889856 CATCATGGGCGACGGCGA 62.890 66.667 18.90 12.42 41.24 5.54
1998 5195 4.270376 GGCGCCGGCATCAAATCC 62.270 66.667 28.98 10.98 42.47 3.01
2130 5342 0.327287 TAGGACGAGGAGGAGGAGGA 60.327 60.000 0.00 0.00 0.00 3.71
2131 5343 1.152839 GGACGAGGAGGAGGAGGAG 60.153 68.421 0.00 0.00 0.00 3.69
2280 5504 4.760220 GCTTGGGAGGGGAGGGGA 62.760 72.222 0.00 0.00 0.00 4.81
2281 5505 2.367512 CTTGGGAGGGGAGGGGAG 60.368 72.222 0.00 0.00 0.00 4.30
2282 5506 4.038804 TTGGGAGGGGAGGGGAGG 62.039 72.222 0.00 0.00 0.00 4.30
2303 5527 1.017387 GGTTAGAGCTTTCCATGGCG 58.983 55.000 6.96 0.00 0.00 5.69
2304 5528 1.017387 GTTAGAGCTTTCCATGGCGG 58.983 55.000 6.96 0.17 0.00 6.13
2305 5529 0.107214 TTAGAGCTTTCCATGGCGGG 60.107 55.000 6.96 0.00 34.36 6.13
2306 5530 2.608970 TAGAGCTTTCCATGGCGGGC 62.609 60.000 6.96 10.53 34.36 6.13
2341 5569 2.106511 CCCGATCCCAAGGTTGATGTAT 59.893 50.000 0.00 0.00 0.00 2.29
2385 5614 4.415881 TTAAACAGCAGGAGTGAGTGAA 57.584 40.909 0.00 0.00 0.00 3.18
2386 5615 2.246719 AACAGCAGGAGTGAGTGAAC 57.753 50.000 0.00 0.00 0.00 3.18
2393 5622 0.963962 GGAGTGAGTGAACGGTGGTA 59.036 55.000 0.00 0.00 0.00 3.25
2394 5623 1.336609 GGAGTGAGTGAACGGTGGTAC 60.337 57.143 0.00 0.00 0.00 3.34
2395 5624 1.612463 GAGTGAGTGAACGGTGGTACT 59.388 52.381 0.00 0.00 0.00 2.73
2405 5634 5.981915 GTGAACGGTGGTACTATAATCCTTC 59.018 44.000 0.00 0.00 0.00 3.46
2407 5636 4.812653 ACGGTGGTACTATAATCCTTCCT 58.187 43.478 0.00 0.00 0.00 3.36
2409 5638 6.376248 ACGGTGGTACTATAATCCTTCCTTA 58.624 40.000 0.00 0.00 0.00 2.69
2410 5639 6.266330 ACGGTGGTACTATAATCCTTCCTTAC 59.734 42.308 0.00 0.00 0.00 2.34
2411 5640 6.492772 CGGTGGTACTATAATCCTTCCTTACT 59.507 42.308 0.00 0.00 0.00 2.24
2412 5641 7.667219 CGGTGGTACTATAATCCTTCCTTACTA 59.333 40.741 0.00 0.00 0.00 1.82
2413 5642 8.801299 GGTGGTACTATAATCCTTCCTTACTAC 58.199 40.741 0.00 0.00 0.00 2.73
2446 5681 8.906693 GTTCTTAAGTTATTCAAAAGCTTGAGC 58.093 33.333 0.00 0.00 42.48 4.26
2472 5707 1.407936 CGTGATCCCTGATGGTCTCT 58.592 55.000 0.00 0.00 34.77 3.10
2476 5711 2.247358 GATCCCTGATGGTCTCTCCTC 58.753 57.143 0.00 0.00 37.07 3.71
2477 5712 0.263172 TCCCTGATGGTCTCTCCTCC 59.737 60.000 0.00 0.00 37.07 4.30
2478 5713 1.112315 CCCTGATGGTCTCTCCTCCG 61.112 65.000 0.00 0.00 37.07 4.63
2479 5714 1.112315 CCTGATGGTCTCTCCTCCGG 61.112 65.000 0.00 0.00 37.07 5.14
2480 5715 1.743321 CTGATGGTCTCTCCTCCGGC 61.743 65.000 0.00 0.00 37.07 6.13
2481 5716 1.758514 GATGGTCTCTCCTCCGGCA 60.759 63.158 0.00 0.00 37.07 5.69
2482 5717 2.022240 GATGGTCTCTCCTCCGGCAC 62.022 65.000 0.00 0.00 37.07 5.01
2483 5718 3.462678 GGTCTCTCCTCCGGCACC 61.463 72.222 0.00 0.00 0.00 5.01
2484 5719 3.462678 GTCTCTCCTCCGGCACCC 61.463 72.222 0.00 0.00 0.00 4.61
2485 5720 3.673597 TCTCTCCTCCGGCACCCT 61.674 66.667 0.00 0.00 0.00 4.34
2486 5721 2.279073 CTCTCCTCCGGCACCCTA 59.721 66.667 0.00 0.00 0.00 3.53
2487 5722 1.830408 CTCTCCTCCGGCACCCTAG 60.830 68.421 0.00 0.00 0.00 3.02
2491 5734 2.363795 CTCCGGCACCCTAGTGGA 60.364 66.667 0.00 0.00 44.69 4.02
2497 5740 1.743772 CGGCACCCTAGTGGAATTCAG 60.744 57.143 7.93 0.00 44.69 3.02
2515 5758 0.111061 AGCATCCAGTTCTTGTGCCA 59.889 50.000 0.00 0.00 36.50 4.92
2516 5759 1.180029 GCATCCAGTTCTTGTGCCAT 58.820 50.000 0.00 0.00 0.00 4.40
2519 5762 2.655090 TCCAGTTCTTGTGCCATTCA 57.345 45.000 0.00 0.00 0.00 2.57
2520 5763 2.229792 TCCAGTTCTTGTGCCATTCAC 58.770 47.619 0.00 0.00 45.82 3.18
2521 5764 1.270550 CCAGTTCTTGTGCCATTCACC 59.729 52.381 0.00 0.00 45.03 4.02
2523 5766 0.240945 GTTCTTGTGCCATTCACCCG 59.759 55.000 0.00 0.00 45.03 5.28
2533 5793 4.877619 TTCACCCGCCCGCACAAA 62.878 61.111 0.00 0.00 0.00 2.83
2586 5850 4.100084 TCTCCGCCATGGCCACAG 62.100 66.667 30.79 22.05 37.80 3.66
2683 5950 0.869730 TTGGGCGTTTTAGCGAGAAC 59.130 50.000 0.00 0.00 38.18 3.01
2690 5957 2.275767 CGTTTTAGCGAGAACGTAGAGC 59.724 50.000 13.30 0.00 42.52 4.09
2723 5996 0.394565 AGCTCCGTCCATATGGCTTC 59.605 55.000 17.58 8.81 34.44 3.86
2726 5999 0.828022 TCCGTCCATATGGCTTCGTT 59.172 50.000 17.58 0.00 34.44 3.85
2765 6042 2.427506 ACAGCTTTGGATTCTTCCGTC 58.572 47.619 0.00 0.00 45.89 4.79
2774 6051 0.391263 ATTCTTCCGTCGCTTGTCCC 60.391 55.000 0.00 0.00 0.00 4.46
2775 6052 1.469335 TTCTTCCGTCGCTTGTCCCT 61.469 55.000 0.00 0.00 0.00 4.20
2778 6055 2.030562 CCGTCGCTTGTCCCTTGT 59.969 61.111 0.00 0.00 0.00 3.16
2806 6083 1.359459 GGACCAGGCTACGAAAAGCG 61.359 60.000 0.00 0.00 43.74 4.68
2831 6131 2.508887 GCACGGAGAGCAGAGCAG 60.509 66.667 0.00 0.00 45.32 4.24
2832 6132 2.508887 CACGGAGAGCAGAGCAGC 60.509 66.667 0.00 0.00 0.00 5.25
2833 6133 2.993840 ACGGAGAGCAGAGCAGCA 60.994 61.111 0.00 0.00 36.85 4.41
2834 6134 2.202770 CGGAGAGCAGAGCAGCAG 60.203 66.667 0.00 0.00 36.85 4.24
2840 6140 4.816984 GCAGAGCAGCAGGGCCAT 62.817 66.667 6.18 0.00 0.00 4.40
2841 6141 2.829003 CAGAGCAGCAGGGCCATG 60.829 66.667 14.45 14.45 0.00 3.66
2842 6142 4.124943 AGAGCAGCAGGGCCATGG 62.125 66.667 20.75 7.63 0.00 3.66
2843 6143 4.437587 GAGCAGCAGGGCCATGGT 62.438 66.667 17.83 17.83 0.00 3.55
2844 6144 3.951769 GAGCAGCAGGGCCATGGTT 62.952 63.158 21.23 6.40 0.00 3.67
2845 6145 3.455469 GCAGCAGGGCCATGGTTC 61.455 66.667 21.23 12.12 0.00 3.62
2846 6146 2.757099 CAGCAGGGCCATGGTTCC 60.757 66.667 21.23 15.28 0.00 3.62
2847 6147 3.267233 AGCAGGGCCATGGTTCCA 61.267 61.111 17.83 0.00 0.00 3.53
2848 6148 2.283821 GCAGGGCCATGGTTCCAA 60.284 61.111 20.75 0.00 0.00 3.53
2849 6149 1.912763 GCAGGGCCATGGTTCCAAA 60.913 57.895 20.75 0.00 0.00 3.28
2850 6150 1.891722 GCAGGGCCATGGTTCCAAAG 61.892 60.000 20.75 14.85 0.00 2.77
2851 6151 1.610379 AGGGCCATGGTTCCAAAGC 60.610 57.895 22.52 7.61 0.00 3.51
2852 6152 2.573340 GGCCATGGTTCCAAAGCG 59.427 61.111 14.67 0.00 0.00 4.68
2853 6153 2.125952 GCCATGGTTCCAAAGCGC 60.126 61.111 14.67 0.00 0.00 5.92
2854 6154 2.179018 CCATGGTTCCAAAGCGCG 59.821 61.111 2.57 0.00 0.00 6.86
2855 6155 2.504681 CATGGTTCCAAAGCGCGC 60.505 61.111 26.66 26.66 0.00 6.86
2856 6156 4.101790 ATGGTTCCAAAGCGCGCG 62.102 61.111 28.44 28.44 0.00 6.86
2858 6158 4.445545 GGTTCCAAAGCGCGCGAG 62.446 66.667 37.18 19.06 0.00 5.03
2873 6173 2.202676 GAGCGAGCGAGGAGGTTG 60.203 66.667 0.00 0.00 34.89 3.77
2874 6174 3.708220 GAGCGAGCGAGGAGGTTGG 62.708 68.421 0.00 0.00 32.44 3.77
2877 6177 2.266055 GAGCGAGGAGGTTGGTGG 59.734 66.667 0.00 0.00 0.00 4.61
2888 6188 1.745489 GTTGGTGGATCACGAGGCC 60.745 63.158 0.00 0.00 34.83 5.19
2904 6230 2.438434 CCACCAACGGCATCCCTC 60.438 66.667 0.00 0.00 0.00 4.30
2907 6233 4.473520 CCAACGGCATCCCTCGCT 62.474 66.667 0.00 0.00 0.00 4.93
2909 6235 2.040544 CAACGGCATCCCTCGCTTT 61.041 57.895 0.00 0.00 0.00 3.51
2910 6236 1.303317 AACGGCATCCCTCGCTTTT 60.303 52.632 0.00 0.00 0.00 2.27
2934 6276 2.364448 GTCTCGGCCCCTTCTCCT 60.364 66.667 0.00 0.00 0.00 3.69
2967 6309 3.138798 CTCCGTCCGTCCGTCCAT 61.139 66.667 0.00 0.00 0.00 3.41
3002 6358 2.202570 CGAATCGTTCGCTCCGGT 60.203 61.111 0.00 0.00 46.97 5.28
3004 6360 1.153901 GAATCGTTCGCTCCGGTGA 60.154 57.895 7.92 0.00 0.00 4.02
3005 6361 1.411493 GAATCGTTCGCTCCGGTGAC 61.411 60.000 7.92 0.00 0.00 3.67
3012 6368 2.556287 GCTCCGGTGACAAAAGCG 59.444 61.111 7.92 0.00 40.62 4.68
3030 6386 1.373059 GAGGAGCGGATGGATTCCC 59.627 63.158 0.00 0.00 42.06 3.97
3033 6389 1.595382 GAGCGGATGGATTCCCGTG 60.595 63.158 0.00 0.00 46.84 4.94
3034 6390 2.028125 GAGCGGATGGATTCCCGTGA 62.028 60.000 0.00 0.00 46.84 4.35
3036 6392 1.230635 GCGGATGGATTCCCGTGATG 61.231 60.000 0.00 0.00 46.84 3.07
3037 6393 1.230635 CGGATGGATTCCCGTGATGC 61.231 60.000 0.00 0.00 42.06 3.91
3038 6394 1.230635 GGATGGATTCCCGTGATGCG 61.231 60.000 0.00 0.00 38.75 4.73
3039 6395 1.845809 GATGGATTCCCGTGATGCGC 61.846 60.000 0.00 0.00 39.71 6.09
3040 6396 2.203070 GGATTCCCGTGATGCGCT 60.203 61.111 9.73 0.00 39.71 5.92
3041 6397 2.247437 GGATTCCCGTGATGCGCTC 61.247 63.158 9.73 4.27 39.71 5.03
3042 6398 2.586079 ATTCCCGTGATGCGCTCG 60.586 61.111 9.73 8.36 39.71 5.03
3043 6399 2.954020 GATTCCCGTGATGCGCTCGA 62.954 60.000 9.73 0.00 39.71 4.04
3044 6400 2.369257 ATTCCCGTGATGCGCTCGAT 62.369 55.000 9.73 0.00 39.71 3.59
3045 6401 1.730451 TTCCCGTGATGCGCTCGATA 61.730 55.000 9.73 0.00 39.71 2.92
3046 6402 2.016704 CCCGTGATGCGCTCGATAC 61.017 63.158 9.73 0.00 39.71 2.24
3047 6403 2.357543 CCGTGATGCGCTCGATACG 61.358 63.158 9.73 12.11 39.71 3.06
3048 6404 1.368850 CGTGATGCGCTCGATACGA 60.369 57.895 9.73 0.00 35.64 3.43
3049 6405 0.726118 CGTGATGCGCTCGATACGAT 60.726 55.000 9.73 0.00 34.61 3.73
3050 6406 1.409412 GTGATGCGCTCGATACGATT 58.591 50.000 9.73 0.00 34.61 3.34
3051 6407 1.383744 GTGATGCGCTCGATACGATTC 59.616 52.381 9.73 7.61 34.61 2.52
3052 6408 0.985549 GATGCGCTCGATACGATTCC 59.014 55.000 9.73 0.00 34.61 3.01
3053 6409 0.598562 ATGCGCTCGATACGATTCCT 59.401 50.000 9.73 0.00 34.61 3.36
3054 6410 0.040336 TGCGCTCGATACGATTCCTC 60.040 55.000 9.73 0.00 34.61 3.71
3055 6411 0.238817 GCGCTCGATACGATTCCTCT 59.761 55.000 11.70 0.00 34.61 3.69
3056 6412 1.726571 GCGCTCGATACGATTCCTCTC 60.727 57.143 11.70 0.00 34.61 3.20
3057 6413 1.801771 CGCTCGATACGATTCCTCTCT 59.198 52.381 2.02 0.00 34.61 3.10
3058 6414 2.412195 CGCTCGATACGATTCCTCTCTG 60.412 54.545 2.02 0.00 34.61 3.35
3059 6415 2.095466 GCTCGATACGATTCCTCTCTGG 60.095 54.545 0.00 0.00 34.61 3.86
3060 6416 1.880675 TCGATACGATTCCTCTCTGGC 59.119 52.381 0.00 0.00 35.26 4.85
3061 6417 1.883275 CGATACGATTCCTCTCTGGCT 59.117 52.381 0.00 0.00 35.26 4.75
3062 6418 3.075148 CGATACGATTCCTCTCTGGCTA 58.925 50.000 0.00 0.00 35.26 3.93
3063 6419 3.502595 CGATACGATTCCTCTCTGGCTAA 59.497 47.826 0.00 0.00 35.26 3.09
3064 6420 4.023107 CGATACGATTCCTCTCTGGCTAAA 60.023 45.833 0.00 0.00 35.26 1.85
3065 6421 5.336055 CGATACGATTCCTCTCTGGCTAAAT 60.336 44.000 0.00 0.00 35.26 1.40
3066 6422 4.329462 ACGATTCCTCTCTGGCTAAATC 57.671 45.455 0.00 0.00 35.26 2.17
3067 6423 3.706594 ACGATTCCTCTCTGGCTAAATCA 59.293 43.478 0.00 0.00 30.32 2.57
3068 6424 4.162320 ACGATTCCTCTCTGGCTAAATCAA 59.838 41.667 0.00 0.00 30.32 2.57
3069 6425 5.163258 ACGATTCCTCTCTGGCTAAATCAAT 60.163 40.000 0.00 0.00 30.32 2.57
3070 6426 5.407995 CGATTCCTCTCTGGCTAAATCAATC 59.592 44.000 0.00 0.00 30.32 2.67
3071 6427 4.327982 TCCTCTCTGGCTAAATCAATCG 57.672 45.455 0.00 0.00 35.26 3.34
3072 6428 3.070159 TCCTCTCTGGCTAAATCAATCGG 59.930 47.826 0.00 0.00 35.26 4.18
3073 6429 3.181461 CCTCTCTGGCTAAATCAATCGGT 60.181 47.826 0.00 0.00 0.00 4.69
3074 6430 4.039245 CCTCTCTGGCTAAATCAATCGGTA 59.961 45.833 0.00 0.00 0.00 4.02
3105 6461 4.069232 CGGTCCAGCGGCTCTGAA 62.069 66.667 5.96 0.00 45.72 3.02
3112 6468 1.517257 AGCGGCTCTGAATCGTTCG 60.517 57.895 0.00 0.00 0.00 3.95
3118 6474 1.272781 CTCTGAATCGTTCGTGCTCC 58.727 55.000 0.00 0.00 0.00 4.70
3164 6520 1.408340 AGTGGCTGTCAGATGAGATCG 59.592 52.381 3.32 0.00 0.00 3.69
3190 6546 3.423154 GCCTTCTCCACGGCGTTG 61.423 66.667 11.19 7.48 36.45 4.10
3191 6547 2.030562 CCTTCTCCACGGCGTTGT 59.969 61.111 11.19 0.00 0.00 3.32
3192 6548 1.597027 CCTTCTCCACGGCGTTGTT 60.597 57.895 11.19 0.00 0.00 2.83
3193 6549 1.164041 CCTTCTCCACGGCGTTGTTT 61.164 55.000 11.19 0.00 0.00 2.83
3194 6550 1.504359 CTTCTCCACGGCGTTGTTTA 58.496 50.000 11.19 0.00 0.00 2.01
3195 6551 2.073816 CTTCTCCACGGCGTTGTTTAT 58.926 47.619 11.19 0.00 0.00 1.40
3196 6552 1.434555 TCTCCACGGCGTTGTTTATG 58.565 50.000 11.19 0.00 0.00 1.90
3197 6553 0.179200 CTCCACGGCGTTGTTTATGC 60.179 55.000 11.19 0.00 38.08 3.14
3202 6558 4.450955 GCGTTGTTTATGCCGGTG 57.549 55.556 1.90 0.00 32.34 4.94
3203 6559 1.870383 GCGTTGTTTATGCCGGTGA 59.130 52.632 1.90 0.00 32.34 4.02
3204 6560 0.450184 GCGTTGTTTATGCCGGTGAT 59.550 50.000 1.90 0.00 32.34 3.06
3205 6561 1.135517 GCGTTGTTTATGCCGGTGATT 60.136 47.619 1.90 0.00 32.34 2.57
3206 6562 2.514902 CGTTGTTTATGCCGGTGATTG 58.485 47.619 1.90 0.00 0.00 2.67
3207 6563 2.730715 CGTTGTTTATGCCGGTGATTGG 60.731 50.000 1.90 0.00 0.00 3.16
3208 6564 1.468985 TGTTTATGCCGGTGATTGGG 58.531 50.000 1.90 0.00 0.00 4.12
3213 6569 4.424711 GCCGGTGATTGGGCTGGA 62.425 66.667 1.90 0.00 45.93 3.86
3214 6570 2.354729 CCGGTGATTGGGCTGGAA 59.645 61.111 0.00 0.00 33.04 3.53
3215 6571 1.076777 CCGGTGATTGGGCTGGAAT 60.077 57.895 0.00 0.00 33.04 3.01
3216 6572 1.103398 CCGGTGATTGGGCTGGAATC 61.103 60.000 0.00 0.00 33.04 2.52
3217 6573 1.103398 CGGTGATTGGGCTGGAATCC 61.103 60.000 0.00 0.00 0.00 3.01
3218 6574 0.033208 GGTGATTGGGCTGGAATCCA 60.033 55.000 0.48 0.48 0.00 3.41
3226 6582 2.892425 CTGGAATCCAGCGTCCGC 60.892 66.667 17.25 2.94 45.13 5.54
3324 6680 0.383949 GCGAGGCTTGTTTTGTTGGA 59.616 50.000 3.19 0.00 0.00 3.53
3358 6714 0.918983 TCTGCGGGGGAATTGATTCT 59.081 50.000 3.94 0.00 37.00 2.40
3372 6728 6.432472 GGAATTGATTCTCTGGTCAAAGTCTT 59.568 38.462 3.94 0.00 37.82 3.01
3377 6733 0.110486 TCTGGTCAAAGTCTTGCCCC 59.890 55.000 0.00 0.00 28.90 5.80
3401 6757 0.312416 TTTGTGCCGGTTTGATTCCG 59.688 50.000 1.90 0.00 46.49 4.30
3420 6776 4.704833 CAGTCGGCACCTGGTGGG 62.705 72.222 27.02 4.30 41.89 4.61
3432 6788 3.318384 GGTGGGCCGGCCAAAAAT 61.318 61.111 44.46 0.00 37.98 1.82
3434 6790 1.375396 GTGGGCCGGCCAAAAATTC 60.375 57.895 44.46 26.57 37.98 2.17
3435 6791 2.125713 GGGCCGGCCAAAAATTCG 60.126 61.111 44.46 0.00 37.98 3.34
3439 6795 0.787787 GCCGGCCAAAAATTCGTTTC 59.212 50.000 18.11 0.00 0.00 2.78
3440 6796 1.604438 GCCGGCCAAAAATTCGTTTCT 60.604 47.619 18.11 0.00 0.00 2.52
3441 6797 2.351932 GCCGGCCAAAAATTCGTTTCTA 60.352 45.455 18.11 0.00 0.00 2.10
3442 6798 3.498082 CCGGCCAAAAATTCGTTTCTAG 58.502 45.455 2.24 0.00 0.00 2.43
3459 6815 4.794278 TCTAGTACAAACTCATCGCCAA 57.206 40.909 0.00 0.00 37.15 4.52
3460 6816 5.142061 TCTAGTACAAACTCATCGCCAAA 57.858 39.130 0.00 0.00 37.15 3.28
3461 6817 5.168569 TCTAGTACAAACTCATCGCCAAAG 58.831 41.667 0.00 0.00 37.15 2.77
3462 6818 3.074412 AGTACAAACTCATCGCCAAAGG 58.926 45.455 0.00 0.00 0.00 3.11
3463 6819 1.981256 ACAAACTCATCGCCAAAGGT 58.019 45.000 0.00 0.00 0.00 3.50
3464 6820 2.306847 ACAAACTCATCGCCAAAGGTT 58.693 42.857 0.00 0.00 0.00 3.50
3465 6821 2.034558 ACAAACTCATCGCCAAAGGTTG 59.965 45.455 0.00 0.00 42.20 3.77
3466 6822 0.598065 AACTCATCGCCAAAGGTTGC 59.402 50.000 0.00 0.00 0.00 4.17
3467 6823 0.250901 ACTCATCGCCAAAGGTTGCT 60.251 50.000 0.00 0.00 0.00 3.91
3468 6824 1.003118 ACTCATCGCCAAAGGTTGCTA 59.997 47.619 0.00 0.00 0.00 3.49
3469 6825 2.292267 CTCATCGCCAAAGGTTGCTAT 58.708 47.619 0.00 0.00 0.00 2.97
3470 6826 2.016318 TCATCGCCAAAGGTTGCTATG 58.984 47.619 0.00 0.00 33.38 2.23
3471 6827 1.745087 CATCGCCAAAGGTTGCTATGT 59.255 47.619 0.00 0.00 0.00 2.29
3472 6828 1.164411 TCGCCAAAGGTTGCTATGTG 58.836 50.000 0.00 0.00 0.00 3.21
3473 6829 0.881118 CGCCAAAGGTTGCTATGTGT 59.119 50.000 0.00 0.00 0.00 3.72
3474 6830 1.401409 CGCCAAAGGTTGCTATGTGTG 60.401 52.381 0.00 0.00 0.00 3.82
3475 6831 1.885887 GCCAAAGGTTGCTATGTGTGA 59.114 47.619 0.00 0.00 0.00 3.58
3476 6832 2.095059 GCCAAAGGTTGCTATGTGTGAG 60.095 50.000 0.00 0.00 0.00 3.51
3477 6833 3.149196 CCAAAGGTTGCTATGTGTGAGT 58.851 45.455 0.00 0.00 0.00 3.41
3478 6834 4.323417 CCAAAGGTTGCTATGTGTGAGTA 58.677 43.478 0.00 0.00 0.00 2.59
3479 6835 4.943705 CCAAAGGTTGCTATGTGTGAGTAT 59.056 41.667 0.00 0.00 0.00 2.12
3480 6836 6.112734 CCAAAGGTTGCTATGTGTGAGTATA 58.887 40.000 0.00 0.00 0.00 1.47
3481 6837 6.258727 CCAAAGGTTGCTATGTGTGAGTATAG 59.741 42.308 0.00 0.00 0.00 1.31
3482 6838 6.546428 AAGGTTGCTATGTGTGAGTATAGT 57.454 37.500 0.00 0.00 31.16 2.12
3483 6839 5.907207 AGGTTGCTATGTGTGAGTATAGTG 58.093 41.667 0.00 0.00 31.16 2.74
3484 6840 5.422331 AGGTTGCTATGTGTGAGTATAGTGT 59.578 40.000 0.00 0.00 31.16 3.55
3485 6841 5.749109 GGTTGCTATGTGTGAGTATAGTGTC 59.251 44.000 0.00 0.00 31.16 3.67
3486 6842 5.515797 TGCTATGTGTGAGTATAGTGTCC 57.484 43.478 0.00 0.00 31.16 4.02
3487 6843 4.953579 TGCTATGTGTGAGTATAGTGTCCA 59.046 41.667 0.00 0.00 31.16 4.02
3488 6844 5.067805 TGCTATGTGTGAGTATAGTGTCCAG 59.932 44.000 0.00 0.00 31.16 3.86
3489 6845 3.868757 TGTGTGAGTATAGTGTCCAGC 57.131 47.619 0.00 0.00 0.00 4.85
3490 6846 3.431415 TGTGTGAGTATAGTGTCCAGCT 58.569 45.455 0.00 0.00 0.00 4.24
3491 6847 3.444034 TGTGTGAGTATAGTGTCCAGCTC 59.556 47.826 0.00 0.00 0.00 4.09
3492 6848 3.697045 GTGTGAGTATAGTGTCCAGCTCT 59.303 47.826 0.00 0.00 0.00 4.09
3493 6849 3.948473 TGTGAGTATAGTGTCCAGCTCTC 59.052 47.826 0.00 0.00 0.00 3.20
3494 6850 4.204012 GTGAGTATAGTGTCCAGCTCTCT 58.796 47.826 0.00 0.00 0.00 3.10
3495 6851 4.642885 GTGAGTATAGTGTCCAGCTCTCTT 59.357 45.833 0.00 0.00 0.00 2.85
3496 6852 4.884744 TGAGTATAGTGTCCAGCTCTCTTC 59.115 45.833 0.00 0.00 0.00 2.87
3497 6853 4.211920 AGTATAGTGTCCAGCTCTCTTCC 58.788 47.826 0.00 0.00 0.00 3.46
3498 6854 2.909504 TAGTGTCCAGCTCTCTTCCT 57.090 50.000 0.00 0.00 0.00 3.36
3499 6855 1.555967 AGTGTCCAGCTCTCTTCCTC 58.444 55.000 0.00 0.00 0.00 3.71
3500 6856 1.077005 AGTGTCCAGCTCTCTTCCTCT 59.923 52.381 0.00 0.00 0.00 3.69
3501 6857 1.899142 GTGTCCAGCTCTCTTCCTCTT 59.101 52.381 0.00 0.00 0.00 2.85
3502 6858 2.094234 GTGTCCAGCTCTCTTCCTCTTC 60.094 54.545 0.00 0.00 0.00 2.87
3503 6859 1.480545 GTCCAGCTCTCTTCCTCTTCC 59.519 57.143 0.00 0.00 0.00 3.46
3504 6860 0.829990 CCAGCTCTCTTCCTCTTCCC 59.170 60.000 0.00 0.00 0.00 3.97
3505 6861 1.622173 CCAGCTCTCTTCCTCTTCCCT 60.622 57.143 0.00 0.00 0.00 4.20
3506 6862 2.187100 CAGCTCTCTTCCTCTTCCCTT 58.813 52.381 0.00 0.00 0.00 3.95
3507 6863 2.093553 CAGCTCTCTTCCTCTTCCCTTG 60.094 54.545 0.00 0.00 0.00 3.61
3508 6864 1.905894 GCTCTCTTCCTCTTCCCTTGT 59.094 52.381 0.00 0.00 0.00 3.16
3509 6865 2.304470 GCTCTCTTCCTCTTCCCTTGTT 59.696 50.000 0.00 0.00 0.00 2.83
3510 6866 3.618752 GCTCTCTTCCTCTTCCCTTGTTC 60.619 52.174 0.00 0.00 0.00 3.18
3511 6867 3.580458 CTCTCTTCCTCTTCCCTTGTTCA 59.420 47.826 0.00 0.00 0.00 3.18
3512 6868 3.580458 TCTCTTCCTCTTCCCTTGTTCAG 59.420 47.826 0.00 0.00 0.00 3.02
3513 6869 3.580458 CTCTTCCTCTTCCCTTGTTCAGA 59.420 47.826 0.00 0.00 0.00 3.27
3514 6870 3.325135 TCTTCCTCTTCCCTTGTTCAGAC 59.675 47.826 0.00 0.00 0.00 3.51
3515 6871 2.977808 TCCTCTTCCCTTGTTCAGACT 58.022 47.619 0.00 0.00 0.00 3.24
3516 6872 3.318313 TCCTCTTCCCTTGTTCAGACTT 58.682 45.455 0.00 0.00 0.00 3.01
3517 6873 3.716872 TCCTCTTCCCTTGTTCAGACTTT 59.283 43.478 0.00 0.00 0.00 2.66
3518 6874 4.166144 TCCTCTTCCCTTGTTCAGACTTTT 59.834 41.667 0.00 0.00 0.00 2.27
3519 6875 4.276926 CCTCTTCCCTTGTTCAGACTTTTG 59.723 45.833 0.00 0.00 0.00 2.44
3520 6876 5.110814 TCTTCCCTTGTTCAGACTTTTGA 57.889 39.130 0.00 0.00 0.00 2.69
3521 6877 5.505780 TCTTCCCTTGTTCAGACTTTTGAA 58.494 37.500 0.00 0.00 34.83 2.69
3522 6878 5.590259 TCTTCCCTTGTTCAGACTTTTGAAG 59.410 40.000 0.00 0.00 37.72 3.02
3523 6879 3.632145 TCCCTTGTTCAGACTTTTGAAGC 59.368 43.478 0.00 0.00 37.72 3.86
3524 6880 3.381272 CCCTTGTTCAGACTTTTGAAGCA 59.619 43.478 0.00 0.00 37.72 3.91
3525 6881 4.142182 CCCTTGTTCAGACTTTTGAAGCAA 60.142 41.667 0.00 0.00 37.72 3.91
3526 6882 4.800471 CCTTGTTCAGACTTTTGAAGCAAC 59.200 41.667 0.00 0.00 37.72 4.17
3527 6883 5.393461 CCTTGTTCAGACTTTTGAAGCAACT 60.393 40.000 0.00 0.00 37.72 3.16
3528 6884 6.183360 CCTTGTTCAGACTTTTGAAGCAACTA 60.183 38.462 0.00 0.00 37.72 2.24
3529 6885 6.751514 TGTTCAGACTTTTGAAGCAACTAA 57.248 33.333 0.00 0.00 37.72 2.24
3530 6886 6.551736 TGTTCAGACTTTTGAAGCAACTAAC 58.448 36.000 0.00 0.00 37.72 2.34
3531 6887 6.374333 TGTTCAGACTTTTGAAGCAACTAACT 59.626 34.615 0.00 0.00 37.72 2.24
3532 6888 7.094377 TGTTCAGACTTTTGAAGCAACTAACTT 60.094 33.333 0.00 0.00 37.72 2.66
3533 6889 8.395633 GTTCAGACTTTTGAAGCAACTAACTTA 58.604 33.333 0.00 0.00 37.72 2.24
3534 6890 8.500753 TCAGACTTTTGAAGCAACTAACTTAA 57.499 30.769 0.00 0.00 0.00 1.85
3535 6891 8.612619 TCAGACTTTTGAAGCAACTAACTTAAG 58.387 33.333 0.00 0.00 0.00 1.85
3536 6892 8.398665 CAGACTTTTGAAGCAACTAACTTAAGT 58.601 33.333 1.12 1.12 30.11 2.24
3537 6893 9.609346 AGACTTTTGAAGCAACTAACTTAAGTA 57.391 29.630 8.92 0.00 28.48 2.24
3544 6900 9.314321 TGAAGCAACTAACTTAAGTATATGAGC 57.686 33.333 8.92 9.28 0.00 4.26
3545 6901 9.535878 GAAGCAACTAACTTAAGTATATGAGCT 57.464 33.333 8.92 11.31 0.00 4.09
3552 6908 9.849166 CTAACTTAAGTATATGAGCTAAGAGGC 57.151 37.037 8.92 0.00 0.00 4.70
3553 6909 8.485578 AACTTAAGTATATGAGCTAAGAGGCT 57.514 34.615 8.92 0.00 46.11 4.58
3554 6910 8.485578 ACTTAAGTATATGAGCTAAGAGGCTT 57.514 34.615 6.26 0.00 43.20 4.35
3555 6911 8.929487 ACTTAAGTATATGAGCTAAGAGGCTTT 58.071 33.333 6.26 0.00 43.20 3.51
3556 6912 9.418045 CTTAAGTATATGAGCTAAGAGGCTTTC 57.582 37.037 0.00 0.00 43.20 2.62
3557 6913 6.985653 AGTATATGAGCTAAGAGGCTTTCA 57.014 37.500 0.00 0.00 43.20 2.69
3558 6914 6.991938 AGTATATGAGCTAAGAGGCTTTCAG 58.008 40.000 0.00 0.00 43.20 3.02
3559 6915 5.885449 ATATGAGCTAAGAGGCTTTCAGT 57.115 39.130 0.00 0.00 43.20 3.41
3560 6916 4.566426 ATGAGCTAAGAGGCTTTCAGTT 57.434 40.909 0.00 0.00 43.20 3.16
3561 6917 3.931578 TGAGCTAAGAGGCTTTCAGTTC 58.068 45.455 0.00 0.00 43.20 3.01
3562 6918 3.324846 TGAGCTAAGAGGCTTTCAGTTCA 59.675 43.478 0.00 0.00 43.20 3.18
3563 6919 4.202357 TGAGCTAAGAGGCTTTCAGTTCAA 60.202 41.667 0.00 0.00 43.20 2.69
3564 6920 4.322567 AGCTAAGAGGCTTTCAGTTCAAG 58.677 43.478 0.00 0.00 39.86 3.02
3565 6921 4.040952 AGCTAAGAGGCTTTCAGTTCAAGA 59.959 41.667 0.00 0.00 39.86 3.02
3566 6922 4.153296 GCTAAGAGGCTTTCAGTTCAAGAC 59.847 45.833 0.00 0.00 0.00 3.01
3567 6923 3.133141 AGAGGCTTTCAGTTCAAGACC 57.867 47.619 0.00 0.00 28.09 3.85
3568 6924 2.155279 GAGGCTTTCAGTTCAAGACCC 58.845 52.381 0.00 0.00 28.09 4.46
3569 6925 1.777272 AGGCTTTCAGTTCAAGACCCT 59.223 47.619 0.00 0.00 28.09 4.34
3570 6926 1.882623 GGCTTTCAGTTCAAGACCCTG 59.117 52.381 0.00 0.00 0.00 4.45
3571 6927 1.268079 GCTTTCAGTTCAAGACCCTGC 59.732 52.381 0.00 0.00 0.00 4.85
3572 6928 1.882623 CTTTCAGTTCAAGACCCTGCC 59.117 52.381 0.00 0.00 0.00 4.85
3573 6929 0.843309 TTCAGTTCAAGACCCTGCCA 59.157 50.000 0.00 0.00 0.00 4.92
3574 6930 0.843309 TCAGTTCAAGACCCTGCCAA 59.157 50.000 0.00 0.00 0.00 4.52
3575 6931 1.425066 TCAGTTCAAGACCCTGCCAAT 59.575 47.619 0.00 0.00 0.00 3.16
3576 6932 1.542915 CAGTTCAAGACCCTGCCAATG 59.457 52.381 0.00 0.00 0.00 2.82
3577 6933 1.145738 AGTTCAAGACCCTGCCAATGT 59.854 47.619 0.00 0.00 0.00 2.71
3578 6934 2.375174 AGTTCAAGACCCTGCCAATGTA 59.625 45.455 0.00 0.00 0.00 2.29
3579 6935 2.749621 GTTCAAGACCCTGCCAATGTAG 59.250 50.000 0.00 0.00 0.00 2.74
3580 6936 1.985159 TCAAGACCCTGCCAATGTAGT 59.015 47.619 0.00 0.00 0.00 2.73
3581 6937 3.178046 TCAAGACCCTGCCAATGTAGTA 58.822 45.455 0.00 0.00 0.00 1.82
3582 6938 3.780294 TCAAGACCCTGCCAATGTAGTAT 59.220 43.478 0.00 0.00 0.00 2.12
3583 6939 4.227300 TCAAGACCCTGCCAATGTAGTATT 59.773 41.667 0.00 0.00 0.00 1.89
3584 6940 5.427157 TCAAGACCCTGCCAATGTAGTATTA 59.573 40.000 0.00 0.00 0.00 0.98
3585 6941 5.968676 AGACCCTGCCAATGTAGTATTAA 57.031 39.130 0.00 0.00 0.00 1.40
3586 6942 6.321821 AGACCCTGCCAATGTAGTATTAAA 57.678 37.500 0.00 0.00 0.00 1.52
3587 6943 6.727394 AGACCCTGCCAATGTAGTATTAAAA 58.273 36.000 0.00 0.00 0.00 1.52
3588 6944 7.179269 AGACCCTGCCAATGTAGTATTAAAAA 58.821 34.615 0.00 0.00 0.00 1.94
3605 6961 2.262572 AAAACGAAGCCGATGATTGC 57.737 45.000 0.00 0.00 39.50 3.56
3606 6962 0.451783 AAACGAAGCCGATGATTGCC 59.548 50.000 0.00 0.00 39.50 4.52
3607 6963 0.676466 AACGAAGCCGATGATTGCCA 60.676 50.000 0.00 0.00 39.50 4.92
3608 6964 1.353103 CGAAGCCGATGATTGCCAC 59.647 57.895 0.00 0.00 38.22 5.01
3609 6965 1.368345 CGAAGCCGATGATTGCCACA 61.368 55.000 0.00 0.00 38.22 4.17
3610 6966 0.099436 GAAGCCGATGATTGCCACAC 59.901 55.000 0.00 0.00 0.00 3.82
3611 6967 1.647545 AAGCCGATGATTGCCACACG 61.648 55.000 0.00 0.00 0.00 4.49
3612 6968 2.398554 GCCGATGATTGCCACACGT 61.399 57.895 0.00 0.00 0.00 4.49
3613 6969 1.425031 CCGATGATTGCCACACGTG 59.575 57.895 15.48 15.48 0.00 4.49
3614 6970 1.298157 CCGATGATTGCCACACGTGT 61.298 55.000 17.22 17.22 0.00 4.49
3615 6971 0.179217 CGATGATTGCCACACGTGTG 60.179 55.000 36.13 36.13 45.23 3.82
3624 6980 3.514777 CACACGTGTGGCATCTAGT 57.485 52.632 35.65 1.12 42.10 2.57
3625 6981 1.070821 CACACGTGTGGCATCTAGTG 58.929 55.000 35.65 10.67 42.10 2.74
3626 6982 0.037326 ACACGTGTGGCATCTAGTGG 60.037 55.000 22.71 0.00 34.28 4.00
3627 6983 0.740868 CACGTGTGGCATCTAGTGGG 60.741 60.000 7.58 0.00 0.00 4.61
3628 6984 1.153369 CGTGTGGCATCTAGTGGGG 60.153 63.158 0.00 0.00 0.00 4.96
3629 6985 1.899437 CGTGTGGCATCTAGTGGGGT 61.899 60.000 0.00 0.00 0.00 4.95
3630 6986 0.328258 GTGTGGCATCTAGTGGGGTT 59.672 55.000 0.00 0.00 0.00 4.11
3631 6987 0.327924 TGTGGCATCTAGTGGGGTTG 59.672 55.000 0.00 0.00 0.00 3.77
3632 6988 0.328258 GTGGCATCTAGTGGGGTTGT 59.672 55.000 0.00 0.00 0.00 3.32
3633 6989 0.327924 TGGCATCTAGTGGGGTTGTG 59.672 55.000 0.00 0.00 0.00 3.33
3634 6990 1.032114 GGCATCTAGTGGGGTTGTGC 61.032 60.000 0.00 0.00 0.00 4.57
3635 6991 1.032114 GCATCTAGTGGGGTTGTGCC 61.032 60.000 0.00 0.00 0.00 5.01
3636 6992 0.744414 CATCTAGTGGGGTTGTGCCG 60.744 60.000 0.00 0.00 38.44 5.69
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
7 8 1.337703 CAAAAGCAGCAAGGCAGTGTA 59.662 47.619 0.00 0.00 35.83 2.90
12 13 0.102844 GTGACAAAAGCAGCAAGGCA 59.897 50.000 0.00 0.00 35.83 4.75
19 20 1.534595 GAGCTCCAGTGACAAAAGCAG 59.465 52.381 0.87 0.00 35.42 4.24
25 26 1.270305 CGAAAGGAGCTCCAGTGACAA 60.270 52.381 33.90 0.00 38.89 3.18
26 27 0.318441 CGAAAGGAGCTCCAGTGACA 59.682 55.000 33.90 0.00 38.89 3.58
29 30 1.018226 CAGCGAAAGGAGCTCCAGTG 61.018 60.000 33.90 20.51 44.06 3.66
31 32 1.018226 CACAGCGAAAGGAGCTCCAG 61.018 60.000 33.90 21.56 44.06 3.86
32 33 1.004560 CACAGCGAAAGGAGCTCCA 60.005 57.895 33.90 0.00 44.06 3.86
33 34 2.394563 GCACAGCGAAAGGAGCTCC 61.395 63.158 26.22 26.22 44.06 4.70
95 96 2.279784 GAGCTCGGGAAGGCGATG 60.280 66.667 0.00 0.00 0.00 3.84
96 97 3.541713 GGAGCTCGGGAAGGCGAT 61.542 66.667 7.83 0.00 0.00 4.58
125 126 1.276421 CCTAGCCGGGATCAATGTAGG 59.724 57.143 2.18 0.00 0.00 3.18
163 164 1.271108 TGGCCGATAAACACTTGCTCA 60.271 47.619 0.00 0.00 0.00 4.26
173 174 2.238646 AGAGATGTTGGTGGCCGATAAA 59.761 45.455 0.00 0.00 0.00 1.40
175 176 1.412710 GAGAGATGTTGGTGGCCGATA 59.587 52.381 0.00 0.00 0.00 2.92
179 180 0.908198 AGAGAGAGATGTTGGTGGCC 59.092 55.000 0.00 0.00 0.00 5.36
194 195 2.554462 GCTAGTGTGTGTGTGAGAGAGA 59.446 50.000 0.00 0.00 0.00 3.10
200 201 3.069443 TCTCATTGCTAGTGTGTGTGTGA 59.931 43.478 0.00 0.00 0.00 3.58
204 205 4.607293 TTCTCTCATTGCTAGTGTGTGT 57.393 40.909 0.00 0.00 0.00 3.72
205 206 5.468072 ACTTTTCTCTCATTGCTAGTGTGTG 59.532 40.000 0.00 0.00 0.00 3.82
206 207 5.468072 CACTTTTCTCTCATTGCTAGTGTGT 59.532 40.000 0.00 0.00 0.00 3.72
207 208 5.698089 TCACTTTTCTCTCATTGCTAGTGTG 59.302 40.000 0.00 0.00 34.78 3.82
209 210 5.931146 ACTCACTTTTCTCTCATTGCTAGTG 59.069 40.000 0.00 0.00 34.55 2.74
212 213 6.015095 TCTCACTCACTTTTCTCTCATTGCTA 60.015 38.462 0.00 0.00 0.00 3.49
213 214 4.965814 TCACTCACTTTTCTCTCATTGCT 58.034 39.130 0.00 0.00 0.00 3.91
215 216 7.670009 AATCTCACTCACTTTTCTCTCATTG 57.330 36.000 0.00 0.00 0.00 2.82
217 218 7.390162 GGAAAATCTCACTCACTTTTCTCTCAT 59.610 37.037 0.00 0.00 37.61 2.90
218 219 6.708054 GGAAAATCTCACTCACTTTTCTCTCA 59.292 38.462 0.00 0.00 37.61 3.27
219 220 6.934083 AGGAAAATCTCACTCACTTTTCTCTC 59.066 38.462 0.00 0.00 37.61 3.20
233 234 9.328845 CTTTCCAATTCAAAAAGGAAAATCTCA 57.671 29.630 6.89 0.00 46.19 3.27
237 238 9.112725 CTCACTTTCCAATTCAAAAAGGAAAAT 57.887 29.630 6.89 0.00 46.19 1.82
241 242 6.379703 TCACTCACTTTCCAATTCAAAAAGGA 59.620 34.615 8.02 0.00 34.94 3.36
242 243 6.572519 TCACTCACTTTCCAATTCAAAAAGG 58.427 36.000 8.02 0.00 34.94 3.11
243 244 8.652810 ATTCACTCACTTTCCAATTCAAAAAG 57.347 30.769 0.00 0.00 36.35 2.27
244 245 9.447157 AAATTCACTCACTTTCCAATTCAAAAA 57.553 25.926 0.00 0.00 0.00 1.94
246 247 8.256605 TCAAATTCACTCACTTTCCAATTCAAA 58.743 29.630 0.00 0.00 0.00 2.69
247 248 7.780064 TCAAATTCACTCACTTTCCAATTCAA 58.220 30.769 0.00 0.00 0.00 2.69
248 249 7.285172 TCTCAAATTCACTCACTTTCCAATTCA 59.715 33.333 0.00 0.00 0.00 2.57
250 251 7.286316 ACTCTCAAATTCACTCACTTTCCAATT 59.714 33.333 0.00 0.00 0.00 2.32
251 252 6.774656 ACTCTCAAATTCACTCACTTTCCAAT 59.225 34.615 0.00 0.00 0.00 3.16
252 253 6.038603 CACTCTCAAATTCACTCACTTTCCAA 59.961 38.462 0.00 0.00 0.00 3.53
253 254 5.528690 CACTCTCAAATTCACTCACTTTCCA 59.471 40.000 0.00 0.00 0.00 3.53
254 255 5.760253 TCACTCTCAAATTCACTCACTTTCC 59.240 40.000 0.00 0.00 0.00 3.13
255 256 6.851222 TCACTCTCAAATTCACTCACTTTC 57.149 37.500 0.00 0.00 0.00 2.62
267 273 6.838401 ATCCTTATCCCTTCACTCTCAAAT 57.162 37.500 0.00 0.00 0.00 2.32
340 776 3.056821 GTGCCCCCTCATAAAAGAAACAC 60.057 47.826 0.00 0.00 0.00 3.32
341 777 3.161866 GTGCCCCCTCATAAAAGAAACA 58.838 45.455 0.00 0.00 0.00 2.83
409 846 2.849880 TAGCAATTCGGAGCAAATGC 57.150 45.000 0.00 0.00 42.49 3.56
436 873 5.885912 ACCCAAATGTTATAAATCTGACGCT 59.114 36.000 0.00 0.00 0.00 5.07
437 874 6.131544 ACCCAAATGTTATAAATCTGACGC 57.868 37.500 0.00 0.00 0.00 5.19
487 930 7.900782 TGTTTCTTAAGAAAACCGGAGATAG 57.099 36.000 27.81 0.00 44.58 2.08
518 970 7.531857 TGGCAAGTCAATAAAAATAGGACAA 57.468 32.000 0.00 0.00 0.00 3.18
569 1381 2.880963 TTTGGTAAGCACTTGTTGGC 57.119 45.000 0.00 0.00 0.00 4.52
589 1401 9.959721 AGGGATTTATTTGATATACACGCTTAT 57.040 29.630 0.00 0.00 0.00 1.73
593 1405 8.997621 TCTAGGGATTTATTTGATATACACGC 57.002 34.615 0.00 0.00 0.00 5.34
626 1438 1.022451 GCCCGCGATTTACCTGTCAA 61.022 55.000 8.23 0.00 0.00 3.18
627 1439 1.448893 GCCCGCGATTTACCTGTCA 60.449 57.895 8.23 0.00 0.00 3.58
640 1452 2.507547 TCACACGATTACGCCCGC 60.508 61.111 0.00 0.00 43.96 6.13
641 1453 0.248907 ATCTCACACGATTACGCCCG 60.249 55.000 0.00 0.00 43.96 6.13
642 1454 2.787601 TATCTCACACGATTACGCCC 57.212 50.000 0.00 0.00 43.96 6.13
643 1455 3.961182 TCTTATCTCACACGATTACGCC 58.039 45.455 0.00 0.00 43.96 5.68
644 1456 4.796830 TGTTCTTATCTCACACGATTACGC 59.203 41.667 0.00 0.00 43.96 4.42
645 1457 5.052304 GCTGTTCTTATCTCACACGATTACG 60.052 44.000 0.00 0.00 45.75 3.18
646 1458 5.232414 GGCTGTTCTTATCTCACACGATTAC 59.768 44.000 0.00 0.00 0.00 1.89
647 1459 5.127194 AGGCTGTTCTTATCTCACACGATTA 59.873 40.000 0.00 0.00 0.00 1.75
648 1460 4.081420 AGGCTGTTCTTATCTCACACGATT 60.081 41.667 0.00 0.00 0.00 3.34
649 1461 3.449018 AGGCTGTTCTTATCTCACACGAT 59.551 43.478 0.00 0.00 0.00 3.73
650 1462 2.826128 AGGCTGTTCTTATCTCACACGA 59.174 45.455 0.00 0.00 0.00 4.35
651 1463 3.238108 AGGCTGTTCTTATCTCACACG 57.762 47.619 0.00 0.00 0.00 4.49
652 1464 3.614616 CGAAGGCTGTTCTTATCTCACAC 59.385 47.826 0.00 0.00 0.00 3.82
653 1465 3.258372 ACGAAGGCTGTTCTTATCTCACA 59.742 43.478 0.00 0.00 0.00 3.58
654 1466 3.851098 ACGAAGGCTGTTCTTATCTCAC 58.149 45.455 0.00 0.00 0.00 3.51
655 1467 3.119101 GGACGAAGGCTGTTCTTATCTCA 60.119 47.826 0.00 0.00 0.00 3.27
656 1468 3.119101 TGGACGAAGGCTGTTCTTATCTC 60.119 47.826 0.00 0.00 0.00 2.75
657 1469 2.832129 TGGACGAAGGCTGTTCTTATCT 59.168 45.455 0.00 0.00 0.00 1.98
658 1470 3.119101 TCTGGACGAAGGCTGTTCTTATC 60.119 47.826 0.00 0.00 0.00 1.75
659 1471 2.832129 TCTGGACGAAGGCTGTTCTTAT 59.168 45.455 0.00 0.00 0.00 1.73
660 1472 2.244695 TCTGGACGAAGGCTGTTCTTA 58.755 47.619 0.00 0.00 0.00 2.10
661 1473 1.048601 TCTGGACGAAGGCTGTTCTT 58.951 50.000 0.00 0.00 0.00 2.52
662 1474 1.048601 TTCTGGACGAAGGCTGTTCT 58.951 50.000 0.00 0.00 0.00 3.01
663 1475 1.734465 CATTCTGGACGAAGGCTGTTC 59.266 52.381 0.00 0.00 34.56 3.18
664 1476 1.347707 TCATTCTGGACGAAGGCTGTT 59.652 47.619 0.00 0.00 33.60 3.16
665 1477 0.976641 TCATTCTGGACGAAGGCTGT 59.023 50.000 0.00 0.00 33.60 4.40
666 1478 1.734465 GTTCATTCTGGACGAAGGCTG 59.266 52.381 0.00 0.00 33.60 4.85
667 1479 1.625818 AGTTCATTCTGGACGAAGGCT 59.374 47.619 0.00 0.00 33.60 4.58
668 1480 1.734465 CAGTTCATTCTGGACGAAGGC 59.266 52.381 0.00 0.00 33.60 4.35
672 1484 1.668919 GCGACAGTTCATTCTGGACGA 60.669 52.381 14.87 0.00 39.49 4.20
678 1490 2.476619 CGTTTGAGCGACAGTTCATTCT 59.523 45.455 0.00 0.00 37.44 2.40
683 1495 1.190323 CACTCGTTTGAGCGACAGTTC 59.810 52.381 0.00 0.00 46.69 3.01
694 1506 5.163550 TGGGTCATCTAGATACACTCGTTTG 60.164 44.000 4.54 0.00 0.00 2.93
746 1565 3.708563 TTTGCAACGGAAGAAAAGGAG 57.291 42.857 0.00 0.00 0.00 3.69
747 1566 4.177783 GTTTTTGCAACGGAAGAAAAGGA 58.822 39.130 0.00 0.00 0.00 3.36
749 1568 4.032786 CCTGTTTTTGCAACGGAAGAAAAG 59.967 41.667 0.00 0.00 0.00 2.27
751 1570 3.056465 ACCTGTTTTTGCAACGGAAGAAA 60.056 39.130 0.00 0.00 0.00 2.52
752 1571 2.494073 ACCTGTTTTTGCAACGGAAGAA 59.506 40.909 0.00 0.00 0.00 2.52
753 1572 2.096248 ACCTGTTTTTGCAACGGAAGA 58.904 42.857 0.00 0.00 0.00 2.87
754 1573 2.577449 ACCTGTTTTTGCAACGGAAG 57.423 45.000 0.00 0.00 0.00 3.46
756 1575 3.192844 TGTTTACCTGTTTTTGCAACGGA 59.807 39.130 0.00 0.00 0.00 4.69
758 1577 3.921021 TGTGTTTACCTGTTTTTGCAACG 59.079 39.130 0.00 0.00 0.00 4.10
759 1578 4.092237 GGTGTGTTTACCTGTTTTTGCAAC 59.908 41.667 0.00 0.00 37.74 4.17
772 1605 5.642491 GTCTAAGAATGGGAGGTGTGTTTAC 59.358 44.000 0.00 0.00 0.00 2.01
799 1632 1.477105 GTGCGTTTCTTGTTGGCTTC 58.523 50.000 0.00 0.00 0.00 3.86
810 1643 2.662156 TGTTTTGTTTTCCGTGCGTTTC 59.338 40.909 0.00 0.00 0.00 2.78
811 1644 2.673833 TGTTTTGTTTTCCGTGCGTTT 58.326 38.095 0.00 0.00 0.00 3.60
832 1665 1.077169 GTGGGAGGGAGGGAACATTTT 59.923 52.381 0.00 0.00 0.00 1.82
840 1673 1.690985 GAGGAAGTGGGAGGGAGGG 60.691 68.421 0.00 0.00 0.00 4.30
841 1674 0.252927 AAGAGGAAGTGGGAGGGAGG 60.253 60.000 0.00 0.00 0.00 4.30
892 1740 2.829384 GGGTGCTCTGGGTTGGTGA 61.829 63.158 0.00 0.00 0.00 4.02
893 1741 2.282462 GGGTGCTCTGGGTTGGTG 60.282 66.667 0.00 0.00 0.00 4.17
894 1742 3.953775 CGGGTGCTCTGGGTTGGT 61.954 66.667 0.00 0.00 0.00 3.67
896 1744 3.612247 CTCCGGGTGCTCTGGGTTG 62.612 68.421 0.00 0.00 42.31 3.77
897 1745 3.322466 CTCCGGGTGCTCTGGGTT 61.322 66.667 0.00 0.00 42.31 4.11
906 1754 3.783362 TTTGGTGGTGCTCCGGGTG 62.783 63.158 0.00 0.00 36.30 4.61
911 1759 3.670377 GGCGTTTGGTGGTGCTCC 61.670 66.667 0.00 0.00 0.00 4.70
1516 2696 1.516365 CCGTCGATATCCAGCTCCGT 61.516 60.000 0.00 0.00 0.00 4.69
1618 2801 3.706373 GAGGGTGGAGGCGCTGAA 61.706 66.667 7.64 0.00 0.00 3.02
1677 2860 4.082523 CTCGGCTTCGGCTCCCAA 62.083 66.667 0.00 0.00 41.44 4.12
1707 2890 1.529309 GGGGATCAGCTTCCTCCAC 59.471 63.158 4.45 0.00 35.97 4.02
1726 2909 0.097674 CGGCCTCTCTGCAATTTTCG 59.902 55.000 0.00 0.00 0.00 3.46
1728 2911 0.038166 TCCGGCCTCTCTGCAATTTT 59.962 50.000 0.00 0.00 0.00 1.82
1750 2933 3.056328 GCCCGAGTCCTTGGCAAC 61.056 66.667 0.00 0.00 44.70 4.17
1754 2937 3.787001 GGGAGCCCGAGTCCTTGG 61.787 72.222 0.00 0.00 34.16 3.61
1845 4937 3.344137 ATCCGTCGCCCTGGCAATT 62.344 57.895 9.17 0.00 42.06 2.32
1923 5015 3.838271 GAGTCCCGCGATCTGGCA 61.838 66.667 8.23 0.00 0.00 4.92
1924 5016 3.157217 ATGAGTCCCGCGATCTGGC 62.157 63.158 8.23 0.00 0.00 4.85
1925 5017 1.006805 GATGAGTCCCGCGATCTGG 60.007 63.158 8.23 0.00 0.00 3.86
1927 5019 2.556459 CCGATGAGTCCCGCGATCT 61.556 63.158 8.23 1.91 0.00 2.75
1949 5092 1.153086 ATGATGCCAAGGCGGAGAC 60.153 57.895 6.60 0.00 45.51 3.36
1981 5124 4.270376 GGATTTGATGCCGGCGCC 62.270 66.667 23.90 19.07 0.00 6.53
1982 5125 4.612536 CGGATTTGATGCCGGCGC 62.613 66.667 23.90 17.28 43.67 6.53
1988 5185 3.562505 GATGAATCAGCGGATTTGATGC 58.437 45.455 13.46 0.00 43.69 3.91
1998 5195 2.974698 GGGCCCGATGAATCAGCG 60.975 66.667 14.44 14.44 43.13 5.18
2106 5306 2.439701 CCTCCTCGTCCTACGCCA 60.440 66.667 0.00 0.00 42.21 5.69
2111 5320 0.327287 TCCTCCTCCTCCTCGTCCTA 60.327 60.000 0.00 0.00 0.00 2.94
2112 5321 1.619975 TCCTCCTCCTCCTCGTCCT 60.620 63.158 0.00 0.00 0.00 3.85
2113 5322 1.152839 CTCCTCCTCCTCCTCGTCC 60.153 68.421 0.00 0.00 0.00 4.79
2114 5323 1.152839 CCTCCTCCTCCTCCTCGTC 60.153 68.421 0.00 0.00 0.00 4.20
2115 5324 2.695970 CCCTCCTCCTCCTCCTCGT 61.696 68.421 0.00 0.00 0.00 4.18
2116 5325 2.197324 CCCTCCTCCTCCTCCTCG 59.803 72.222 0.00 0.00 0.00 4.63
2144 5356 2.734723 CGACCACGGTCACAGCTG 60.735 66.667 13.48 13.48 44.77 4.24
2278 5502 0.462225 GGAAAGCTCTAACCGCCTCC 60.462 60.000 0.00 0.00 0.00 4.30
2279 5503 0.249398 TGGAAAGCTCTAACCGCCTC 59.751 55.000 0.00 0.00 0.00 4.70
2280 5504 0.912486 ATGGAAAGCTCTAACCGCCT 59.088 50.000 0.00 0.00 0.00 5.52
2281 5505 1.017387 CATGGAAAGCTCTAACCGCC 58.983 55.000 0.00 0.00 0.00 6.13
2282 5506 1.017387 CCATGGAAAGCTCTAACCGC 58.983 55.000 5.56 0.00 0.00 5.68
2341 5569 5.222079 TGGCACTCACTCACTAATTTACA 57.778 39.130 0.00 0.00 0.00 2.41
2385 5614 4.812653 AGGAAGGATTATAGTACCACCGT 58.187 43.478 0.00 0.00 0.00 4.83
2386 5615 5.803237 AAGGAAGGATTATAGTACCACCG 57.197 43.478 0.00 0.00 0.00 4.94
2434 5669 1.343506 GGAATGCGCTCAAGCTTTTG 58.656 50.000 9.73 0.00 39.32 2.44
2446 5681 0.250038 ATCAGGGATCACGGAATGCG 60.250 55.000 0.75 0.00 0.00 4.73
2454 5689 1.691434 GGAGAGACCATCAGGGATCAC 59.309 57.143 0.00 0.00 41.15 3.06
2476 5711 0.463833 GAATTCCACTAGGGTGCCGG 60.464 60.000 0.00 0.00 41.75 6.13
2477 5712 0.251916 TGAATTCCACTAGGGTGCCG 59.748 55.000 2.27 0.00 41.75 5.69
2478 5713 2.019156 GCTGAATTCCACTAGGGTGCC 61.019 57.143 2.27 0.00 41.75 5.01
2479 5714 1.340017 TGCTGAATTCCACTAGGGTGC 60.340 52.381 2.27 0.00 41.75 5.01
2480 5715 2.787473 TGCTGAATTCCACTAGGGTG 57.213 50.000 2.27 0.00 42.65 4.61
2481 5716 2.173569 GGATGCTGAATTCCACTAGGGT 59.826 50.000 2.27 0.00 38.11 4.34
2482 5717 2.173356 TGGATGCTGAATTCCACTAGGG 59.827 50.000 2.27 0.00 37.10 3.53
2483 5718 3.118112 ACTGGATGCTGAATTCCACTAGG 60.118 47.826 2.27 0.00 37.10 3.02
2484 5719 4.148128 ACTGGATGCTGAATTCCACTAG 57.852 45.455 2.27 0.00 37.10 2.57
2485 5720 4.225942 AGAACTGGATGCTGAATTCCACTA 59.774 41.667 2.27 0.00 37.10 2.74
2486 5721 3.009916 AGAACTGGATGCTGAATTCCACT 59.990 43.478 2.27 0.00 37.10 4.00
2487 5722 3.350833 AGAACTGGATGCTGAATTCCAC 58.649 45.455 2.27 0.00 37.10 4.02
2491 5734 3.057033 GCACAAGAACTGGATGCTGAATT 60.057 43.478 0.00 0.00 33.44 2.17
2497 5740 2.644887 TGGCACAAGAACTGGATGC 58.355 52.632 0.00 0.00 31.92 3.91
2515 5758 4.652131 TTGTGCGGGCGGGTGAAT 62.652 61.111 0.00 0.00 0.00 2.57
2516 5759 4.877619 TTTGTGCGGGCGGGTGAA 62.878 61.111 0.00 0.00 0.00 3.18
2523 5766 2.796245 GAATGGACGTTTGTGCGGGC 62.796 60.000 0.00 0.00 39.68 6.13
2583 5847 0.399949 TCTCTGTCCCAACACCCTGT 60.400 55.000 0.00 0.00 0.00 4.00
2586 5850 0.836400 TCCTCTCTGTCCCAACACCC 60.836 60.000 0.00 0.00 0.00 4.61
2683 5950 1.734359 GCGCTTTGTCTCGCTCTACG 61.734 60.000 0.00 0.00 46.92 3.51
2690 5957 3.248029 AGCTTGCGCTTTGTCTCG 58.752 55.556 9.73 0.00 46.47 4.04
2710 5979 2.808543 GGATCAACGAAGCCATATGGAC 59.191 50.000 26.47 16.05 37.39 4.02
2738 6011 5.923114 GGAAGAATCCAAAGCTGTTTTCTTC 59.077 40.000 17.76 17.76 45.79 2.87
2740 6013 4.022849 CGGAAGAATCCAAAGCTGTTTTCT 60.023 41.667 0.00 0.00 46.97 2.52
2765 6042 2.030562 ACGGACAAGGGACAAGCG 59.969 61.111 0.00 0.00 0.00 4.68
2825 6125 4.124943 CCATGGCCCTGCTGCTCT 62.125 66.667 0.00 0.00 0.00 4.09
2826 6126 3.951769 AACCATGGCCCTGCTGCTC 62.952 63.158 13.04 0.00 0.00 4.26
2827 6127 3.951769 GAACCATGGCCCTGCTGCT 62.952 63.158 13.04 0.00 0.00 4.24
2828 6128 3.455469 GAACCATGGCCCTGCTGC 61.455 66.667 13.04 0.00 0.00 5.25
2829 6129 2.757099 GGAACCATGGCCCTGCTG 60.757 66.667 13.04 0.00 0.00 4.41
2830 6130 2.384933 TTTGGAACCATGGCCCTGCT 62.385 55.000 20.62 0.00 0.00 4.24
2831 6131 1.891722 CTTTGGAACCATGGCCCTGC 61.892 60.000 20.62 8.99 0.00 4.85
2832 6132 1.891722 GCTTTGGAACCATGGCCCTG 61.892 60.000 20.62 0.00 0.00 4.45
2833 6133 1.610379 GCTTTGGAACCATGGCCCT 60.610 57.895 20.62 3.53 0.00 5.19
2834 6134 2.981302 GCTTTGGAACCATGGCCC 59.019 61.111 13.04 14.27 0.00 5.80
2841 6141 4.445545 CTCGCGCGCTTTGGAACC 62.446 66.667 30.48 0.00 0.00 3.62
2855 6155 3.816524 AACCTCCTCGCTCGCTCG 61.817 66.667 0.00 0.00 0.00 5.03
2856 6156 2.202676 CAACCTCCTCGCTCGCTC 60.203 66.667 0.00 0.00 0.00 5.03
2857 6157 3.764466 CCAACCTCCTCGCTCGCT 61.764 66.667 0.00 0.00 0.00 4.93
2858 6158 4.070552 ACCAACCTCCTCGCTCGC 62.071 66.667 0.00 0.00 0.00 5.03
2859 6159 2.125912 CACCAACCTCCTCGCTCG 60.126 66.667 0.00 0.00 0.00 5.03
2860 6160 1.617947 ATCCACCAACCTCCTCGCTC 61.618 60.000 0.00 0.00 0.00 5.03
2861 6161 1.613630 ATCCACCAACCTCCTCGCT 60.614 57.895 0.00 0.00 0.00 4.93
2862 6162 1.153349 GATCCACCAACCTCCTCGC 60.153 63.158 0.00 0.00 0.00 5.03
2863 6163 0.108138 GTGATCCACCAACCTCCTCG 60.108 60.000 0.00 0.00 0.00 4.63
2864 6164 0.108138 CGTGATCCACCAACCTCCTC 60.108 60.000 0.00 0.00 0.00 3.71
2865 6165 0.544357 TCGTGATCCACCAACCTCCT 60.544 55.000 0.00 0.00 0.00 3.69
2866 6166 0.108138 CTCGTGATCCACCAACCTCC 60.108 60.000 0.00 0.00 0.00 4.30
2867 6167 0.108138 CCTCGTGATCCACCAACCTC 60.108 60.000 0.00 0.00 0.00 3.85
2868 6168 1.983224 CCTCGTGATCCACCAACCT 59.017 57.895 0.00 0.00 0.00 3.50
2869 6169 1.745489 GCCTCGTGATCCACCAACC 60.745 63.158 0.00 0.00 0.00 3.77
2873 6173 2.125106 GTGGCCTCGTGATCCACC 60.125 66.667 3.32 0.00 43.27 4.61
2877 6177 2.100631 CGTTGGTGGCCTCGTGATC 61.101 63.158 3.32 0.00 0.00 2.92
2888 6188 2.819595 CGAGGGATGCCGTTGGTG 60.820 66.667 0.00 0.00 0.00 4.17
2907 6233 3.039588 GCCGAGACGTGGCGAAAA 61.040 61.111 8.09 0.00 43.70 2.29
2993 6349 1.959226 GCTTTTGTCACCGGAGCGA 60.959 57.895 9.46 0.00 0.00 4.93
2996 6352 1.291877 CCTCGCTTTTGTCACCGGAG 61.292 60.000 9.46 0.00 0.00 4.63
3002 6358 1.667830 CCGCTCCTCGCTTTTGTCA 60.668 57.895 0.00 0.00 36.73 3.58
3004 6360 1.021390 CATCCGCTCCTCGCTTTTGT 61.021 55.000 0.00 0.00 36.73 2.83
3005 6361 1.709147 CCATCCGCTCCTCGCTTTTG 61.709 60.000 0.00 0.00 36.73 2.44
3030 6386 0.726118 ATCGTATCGAGCGCATCACG 60.726 55.000 11.47 11.79 39.91 4.35
3031 6387 1.383744 GAATCGTATCGAGCGCATCAC 59.616 52.381 11.47 0.00 39.91 3.06
3033 6389 0.985549 GGAATCGTATCGAGCGCATC 59.014 55.000 11.47 3.18 39.91 3.91
3034 6390 0.598562 AGGAATCGTATCGAGCGCAT 59.401 50.000 11.47 0.00 39.91 4.73
3036 6392 0.238817 AGAGGAATCGTATCGAGCGC 59.761 55.000 0.00 0.00 39.91 5.92
3037 6393 1.801771 AGAGAGGAATCGTATCGAGCG 59.198 52.381 5.91 5.91 39.91 5.03
3038 6394 2.095466 CCAGAGAGGAATCGTATCGAGC 60.095 54.545 0.00 0.00 38.53 5.03
3039 6395 2.095466 GCCAGAGAGGAATCGTATCGAG 60.095 54.545 0.00 0.00 38.53 4.04
3040 6396 1.880675 GCCAGAGAGGAATCGTATCGA 59.119 52.381 0.00 0.00 41.22 3.59
3041 6397 1.883275 AGCCAGAGAGGAATCGTATCG 59.117 52.381 0.00 0.00 41.22 2.92
3042 6398 5.455056 TTTAGCCAGAGAGGAATCGTATC 57.545 43.478 0.00 0.00 41.22 2.24
3043 6399 5.540337 TGATTTAGCCAGAGAGGAATCGTAT 59.460 40.000 0.00 0.00 41.22 3.06
3044 6400 4.893524 TGATTTAGCCAGAGAGGAATCGTA 59.106 41.667 0.00 0.00 41.22 3.43
3045 6401 3.706594 TGATTTAGCCAGAGAGGAATCGT 59.293 43.478 0.00 0.00 41.22 3.73
3046 6402 4.327982 TGATTTAGCCAGAGAGGAATCG 57.672 45.455 0.00 0.00 41.22 3.34
3047 6403 5.407995 CGATTGATTTAGCCAGAGAGGAATC 59.592 44.000 0.00 0.00 41.22 2.52
3048 6404 5.303971 CGATTGATTTAGCCAGAGAGGAAT 58.696 41.667 0.00 0.00 41.22 3.01
3049 6405 4.443457 CCGATTGATTTAGCCAGAGAGGAA 60.443 45.833 0.00 0.00 41.22 3.36
3050 6406 3.070159 CCGATTGATTTAGCCAGAGAGGA 59.930 47.826 0.00 0.00 41.22 3.71
3051 6407 3.181461 ACCGATTGATTTAGCCAGAGAGG 60.181 47.826 0.00 0.00 41.84 3.69
3052 6408 4.065321 ACCGATTGATTTAGCCAGAGAG 57.935 45.455 0.00 0.00 0.00 3.20
3053 6409 4.501571 GCTACCGATTGATTTAGCCAGAGA 60.502 45.833 0.00 0.00 32.38 3.10
3054 6410 3.743396 GCTACCGATTGATTTAGCCAGAG 59.257 47.826 0.00 0.00 32.38 3.35
3055 6411 3.388024 AGCTACCGATTGATTTAGCCAGA 59.612 43.478 0.00 0.00 38.16 3.86
3056 6412 3.733337 AGCTACCGATTGATTTAGCCAG 58.267 45.455 0.00 0.00 38.16 4.85
3057 6413 3.838244 AGCTACCGATTGATTTAGCCA 57.162 42.857 0.00 0.00 38.16 4.75
3058 6414 3.498777 GGAAGCTACCGATTGATTTAGCC 59.501 47.826 0.00 0.00 38.16 3.93
3059 6415 4.127171 TGGAAGCTACCGATTGATTTAGC 58.873 43.478 0.00 0.00 37.76 3.09
3060 6416 6.867662 AATGGAAGCTACCGATTGATTTAG 57.132 37.500 0.00 0.00 0.00 1.85
3061 6417 6.039270 CCAAATGGAAGCTACCGATTGATTTA 59.961 38.462 0.00 0.00 37.39 1.40
3062 6418 5.163519 CCAAATGGAAGCTACCGATTGATTT 60.164 40.000 0.00 0.00 37.39 2.17
3063 6419 4.339247 CCAAATGGAAGCTACCGATTGATT 59.661 41.667 0.00 0.00 37.39 2.57
3064 6420 3.885297 CCAAATGGAAGCTACCGATTGAT 59.115 43.478 0.00 0.00 37.39 2.57
3065 6421 3.054728 TCCAAATGGAAGCTACCGATTGA 60.055 43.478 0.00 0.00 42.18 2.57
3066 6422 3.278574 TCCAAATGGAAGCTACCGATTG 58.721 45.455 0.00 0.00 42.18 2.67
3067 6423 3.644966 TCCAAATGGAAGCTACCGATT 57.355 42.857 0.00 0.00 42.18 3.34
3072 6428 5.746040 TGGACCGTCCAAATGGAAGCTAC 62.746 52.174 18.34 0.00 45.00 3.58
3073 6429 3.682976 TGGACCGTCCAAATGGAAGCTA 61.683 50.000 18.34 0.00 45.00 3.32
3074 6430 3.004880 TGGACCGTCCAAATGGAAGCT 62.005 52.381 18.34 0.00 45.00 3.74
3097 6453 0.737715 AGCACGAACGATTCAGAGCC 60.738 55.000 0.14 0.00 0.00 4.70
3102 6458 1.445410 CGGGAGCACGAACGATTCA 60.445 57.895 0.14 0.00 35.47 2.57
3105 6461 4.814294 GCCGGGAGCACGAACGAT 62.814 66.667 2.18 0.00 42.97 3.73
3135 6491 1.139853 CTGACAGCCACTTCCCCTATC 59.860 57.143 0.00 0.00 0.00 2.08
3175 6531 1.504359 TAAACAACGCCGTGGAGAAG 58.496 50.000 0.00 0.00 0.00 2.85
3177 6533 1.434555 CATAAACAACGCCGTGGAGA 58.565 50.000 0.00 0.00 0.00 3.71
3178 6534 0.179200 GCATAAACAACGCCGTGGAG 60.179 55.000 0.00 0.00 0.00 3.86
3179 6535 1.579084 GGCATAAACAACGCCGTGGA 61.579 55.000 0.00 0.00 35.79 4.02
3180 6536 1.154112 GGCATAAACAACGCCGTGG 60.154 57.895 0.00 0.00 35.79 4.94
3181 6537 4.450955 GGCATAAACAACGCCGTG 57.549 55.556 0.00 0.00 35.79 4.94
3184 6540 1.154112 CACCGGCATAAACAACGCC 60.154 57.895 0.00 0.00 42.64 5.68
3185 6541 0.450184 ATCACCGGCATAAACAACGC 59.550 50.000 0.00 0.00 0.00 4.84
3186 6542 2.514902 CAATCACCGGCATAAACAACG 58.485 47.619 0.00 0.00 0.00 4.10
3187 6543 2.416701 CCCAATCACCGGCATAAACAAC 60.417 50.000 0.00 0.00 0.00 3.32
3188 6544 1.821753 CCCAATCACCGGCATAAACAA 59.178 47.619 0.00 0.00 0.00 2.83
3189 6545 1.468985 CCCAATCACCGGCATAAACA 58.531 50.000 0.00 0.00 0.00 2.83
3190 6546 0.102300 GCCCAATCACCGGCATAAAC 59.898 55.000 0.00 0.00 45.01 2.01
3191 6547 2.499214 GCCCAATCACCGGCATAAA 58.501 52.632 0.00 0.00 45.01 1.40
3192 6548 4.251246 GCCCAATCACCGGCATAA 57.749 55.556 0.00 0.00 45.01 1.90
3196 6552 3.936772 TTCCAGCCCAATCACCGGC 62.937 63.158 0.00 0.00 46.09 6.13
3197 6553 1.076777 ATTCCAGCCCAATCACCGG 60.077 57.895 0.00 0.00 0.00 5.28
3198 6554 1.103398 GGATTCCAGCCCAATCACCG 61.103 60.000 0.00 0.00 32.65 4.94
3199 6555 0.033208 TGGATTCCAGCCCAATCACC 60.033 55.000 0.00 0.00 32.65 4.02
3200 6556 1.396653 CTGGATTCCAGCCCAATCAC 58.603 55.000 19.49 0.00 45.13 3.06
3201 6557 3.909587 CTGGATTCCAGCCCAATCA 57.090 52.632 19.49 0.00 45.13 2.57
3210 6566 4.467084 GGCGGACGCTGGATTCCA 62.467 66.667 16.72 5.05 41.60 3.53
3284 6640 3.186613 GCCACTTACTGCTTGACTTACAC 59.813 47.826 0.00 0.00 0.00 2.90
3343 6699 1.212935 ACCAGAGAATCAATTCCCCCG 59.787 52.381 0.00 0.00 37.82 5.73
3345 6701 3.652057 TGACCAGAGAATCAATTCCCC 57.348 47.619 0.00 0.00 37.82 4.81
3384 6740 3.661911 CGGAATCAAACCGGCACA 58.338 55.556 0.00 0.00 45.65 4.57
3415 6771 2.796483 GAATTTTTGGCCGGCCCACC 62.796 60.000 41.75 18.68 45.34 4.61
3416 6772 1.375396 GAATTTTTGGCCGGCCCAC 60.375 57.895 41.75 19.09 45.34 4.61
3418 6774 2.125713 CGAATTTTTGGCCGGCCC 60.126 61.111 41.75 24.44 34.56 5.80
3420 6776 0.787787 GAAACGAATTTTTGGCCGGC 59.212 50.000 21.18 21.18 0.00 6.13
3432 6788 5.344128 GCGATGAGTTTGTACTAGAAACGAA 59.656 40.000 0.00 0.00 38.18 3.85
3434 6790 4.031426 GGCGATGAGTTTGTACTAGAAACG 59.969 45.833 0.00 0.00 38.18 3.60
3435 6791 4.927425 TGGCGATGAGTTTGTACTAGAAAC 59.073 41.667 0.00 1.38 33.84 2.78
3439 6795 4.330074 CCTTTGGCGATGAGTTTGTACTAG 59.670 45.833 0.00 0.00 33.84 2.57
3440 6796 4.250464 CCTTTGGCGATGAGTTTGTACTA 58.750 43.478 0.00 0.00 33.84 1.82
3441 6797 3.074412 CCTTTGGCGATGAGTTTGTACT 58.926 45.455 0.00 0.00 37.31 2.73
3442 6798 2.812011 ACCTTTGGCGATGAGTTTGTAC 59.188 45.455 0.00 0.00 0.00 2.90
3459 6815 6.070767 ACACTATACTCACACATAGCAACCTT 60.071 38.462 0.00 0.00 0.00 3.50
3460 6816 5.422331 ACACTATACTCACACATAGCAACCT 59.578 40.000 0.00 0.00 0.00 3.50
3461 6817 5.661458 ACACTATACTCACACATAGCAACC 58.339 41.667 0.00 0.00 0.00 3.77
3462 6818 5.749109 GGACACTATACTCACACATAGCAAC 59.251 44.000 0.00 0.00 0.00 4.17
3463 6819 5.420739 TGGACACTATACTCACACATAGCAA 59.579 40.000 0.00 0.00 0.00 3.91
3464 6820 4.953579 TGGACACTATACTCACACATAGCA 59.046 41.667 0.00 0.00 0.00 3.49
3465 6821 5.515797 TGGACACTATACTCACACATAGC 57.484 43.478 0.00 0.00 0.00 2.97
3466 6822 5.300539 AGCTGGACACTATACTCACACATAG 59.699 44.000 0.00 0.00 0.00 2.23
3467 6823 5.201243 AGCTGGACACTATACTCACACATA 58.799 41.667 0.00 0.00 0.00 2.29
3468 6824 4.026744 AGCTGGACACTATACTCACACAT 58.973 43.478 0.00 0.00 0.00 3.21
3469 6825 3.431415 AGCTGGACACTATACTCACACA 58.569 45.455 0.00 0.00 0.00 3.72
3470 6826 3.697045 AGAGCTGGACACTATACTCACAC 59.303 47.826 0.00 0.00 0.00 3.82
3471 6827 3.948473 GAGAGCTGGACACTATACTCACA 59.052 47.826 0.00 0.00 0.00 3.58
3472 6828 4.204012 AGAGAGCTGGACACTATACTCAC 58.796 47.826 0.00 0.00 0.00 3.51
3473 6829 4.511786 AGAGAGCTGGACACTATACTCA 57.488 45.455 0.00 0.00 0.00 3.41
3474 6830 4.277423 GGAAGAGAGCTGGACACTATACTC 59.723 50.000 0.00 0.00 0.00 2.59
3475 6831 4.079443 AGGAAGAGAGCTGGACACTATACT 60.079 45.833 0.00 0.00 0.00 2.12
3476 6832 4.211920 AGGAAGAGAGCTGGACACTATAC 58.788 47.826 0.00 0.00 0.00 1.47
3477 6833 4.167113 AGAGGAAGAGAGCTGGACACTATA 59.833 45.833 0.00 0.00 0.00 1.31
3478 6834 3.052944 AGAGGAAGAGAGCTGGACACTAT 60.053 47.826 0.00 0.00 0.00 2.12
3479 6835 2.310349 AGAGGAAGAGAGCTGGACACTA 59.690 50.000 0.00 0.00 0.00 2.74
3480 6836 1.077005 AGAGGAAGAGAGCTGGACACT 59.923 52.381 0.00 0.00 0.00 3.55
3481 6837 1.555967 AGAGGAAGAGAGCTGGACAC 58.444 55.000 0.00 0.00 0.00 3.67
3482 6838 2.175202 GAAGAGGAAGAGAGCTGGACA 58.825 52.381 0.00 0.00 0.00 4.02
3483 6839 1.480545 GGAAGAGGAAGAGAGCTGGAC 59.519 57.143 0.00 0.00 0.00 4.02
3484 6840 1.621072 GGGAAGAGGAAGAGAGCTGGA 60.621 57.143 0.00 0.00 0.00 3.86
3485 6841 0.829990 GGGAAGAGGAAGAGAGCTGG 59.170 60.000 0.00 0.00 0.00 4.85
3486 6842 1.864669 AGGGAAGAGGAAGAGAGCTG 58.135 55.000 0.00 0.00 0.00 4.24
3487 6843 2.187100 CAAGGGAAGAGGAAGAGAGCT 58.813 52.381 0.00 0.00 0.00 4.09
3488 6844 1.905894 ACAAGGGAAGAGGAAGAGAGC 59.094 52.381 0.00 0.00 0.00 4.09
3489 6845 3.580458 TGAACAAGGGAAGAGGAAGAGAG 59.420 47.826 0.00 0.00 0.00 3.20
3490 6846 3.580458 CTGAACAAGGGAAGAGGAAGAGA 59.420 47.826 0.00 0.00 0.00 3.10
3491 6847 3.580458 TCTGAACAAGGGAAGAGGAAGAG 59.420 47.826 0.00 0.00 0.00 2.85
3492 6848 3.325135 GTCTGAACAAGGGAAGAGGAAGA 59.675 47.826 0.00 0.00 0.00 2.87
3493 6849 3.326297 AGTCTGAACAAGGGAAGAGGAAG 59.674 47.826 0.00 0.00 0.00 3.46
3494 6850 3.318313 AGTCTGAACAAGGGAAGAGGAA 58.682 45.455 0.00 0.00 0.00 3.36
3495 6851 2.977808 AGTCTGAACAAGGGAAGAGGA 58.022 47.619 0.00 0.00 0.00 3.71
3496 6852 3.778954 AAGTCTGAACAAGGGAAGAGG 57.221 47.619 0.00 0.00 0.00 3.69
3497 6853 5.126067 TCAAAAGTCTGAACAAGGGAAGAG 58.874 41.667 0.00 0.00 0.00 2.85
3498 6854 5.110814 TCAAAAGTCTGAACAAGGGAAGA 57.889 39.130 0.00 0.00 0.00 2.87
3499 6855 5.734503 GCTTCAAAAGTCTGAACAAGGGAAG 60.735 44.000 0.00 0.00 32.00 3.46
3500 6856 4.097892 GCTTCAAAAGTCTGAACAAGGGAA 59.902 41.667 0.00 0.00 32.00 3.97
3501 6857 3.632145 GCTTCAAAAGTCTGAACAAGGGA 59.368 43.478 0.00 0.00 32.00 4.20
3502 6858 3.381272 TGCTTCAAAAGTCTGAACAAGGG 59.619 43.478 0.00 0.00 32.00 3.95
3503 6859 4.637483 TGCTTCAAAAGTCTGAACAAGG 57.363 40.909 0.00 0.00 32.00 3.61
3504 6860 5.644644 AGTTGCTTCAAAAGTCTGAACAAG 58.355 37.500 0.00 0.00 32.28 3.16
3505 6861 5.643379 AGTTGCTTCAAAAGTCTGAACAA 57.357 34.783 0.00 0.00 32.00 2.83
3506 6862 6.374333 AGTTAGTTGCTTCAAAAGTCTGAACA 59.626 34.615 0.00 0.00 32.00 3.18
3507 6863 6.786207 AGTTAGTTGCTTCAAAAGTCTGAAC 58.214 36.000 0.00 0.00 32.00 3.18
3508 6864 7.391148 AAGTTAGTTGCTTCAAAAGTCTGAA 57.609 32.000 0.00 0.00 34.22 3.02
3509 6865 8.500753 TTAAGTTAGTTGCTTCAAAAGTCTGA 57.499 30.769 0.00 0.00 0.00 3.27
3510 6866 8.398665 ACTTAAGTTAGTTGCTTCAAAAGTCTG 58.601 33.333 1.12 0.00 0.00 3.51
3511 6867 8.507524 ACTTAAGTTAGTTGCTTCAAAAGTCT 57.492 30.769 1.12 0.00 0.00 3.24
3518 6874 9.314321 GCTCATATACTTAAGTTAGTTGCTTCA 57.686 33.333 14.49 0.00 0.00 3.02
3519 6875 9.535878 AGCTCATATACTTAAGTTAGTTGCTTC 57.464 33.333 14.49 0.00 0.00 3.86
3526 6882 9.849166 GCCTCTTAGCTCATATACTTAAGTTAG 57.151 37.037 14.49 5.51 0.00 2.34
3527 6883 9.589461 AGCCTCTTAGCTCATATACTTAAGTTA 57.411 33.333 14.49 6.70 39.48 2.24
3528 6884 8.485578 AGCCTCTTAGCTCATATACTTAAGTT 57.514 34.615 14.49 4.61 39.48 2.66
3529 6885 8.485578 AAGCCTCTTAGCTCATATACTTAAGT 57.514 34.615 13.68 13.68 44.11 2.24
3530 6886 9.418045 GAAAGCCTCTTAGCTCATATACTTAAG 57.582 37.037 0.00 0.00 44.11 1.85
3531 6887 8.924303 TGAAAGCCTCTTAGCTCATATACTTAA 58.076 33.333 0.00 0.00 44.11 1.85
3532 6888 8.478775 TGAAAGCCTCTTAGCTCATATACTTA 57.521 34.615 0.00 0.00 44.11 2.24
3533 6889 7.070571 ACTGAAAGCCTCTTAGCTCATATACTT 59.929 37.037 0.00 0.00 44.11 2.24
3534 6890 6.553100 ACTGAAAGCCTCTTAGCTCATATACT 59.447 38.462 0.00 0.00 44.11 2.12
3535 6891 6.754193 ACTGAAAGCCTCTTAGCTCATATAC 58.246 40.000 0.00 0.00 44.11 1.47
3536 6892 6.985653 ACTGAAAGCCTCTTAGCTCATATA 57.014 37.500 0.00 0.00 44.11 0.86
3537 6893 5.885449 ACTGAAAGCCTCTTAGCTCATAT 57.115 39.130 0.00 0.00 44.11 1.78
3538 6894 5.187772 TGAACTGAAAGCCTCTTAGCTCATA 59.812 40.000 0.00 0.00 44.11 2.15
3539 6895 4.019860 TGAACTGAAAGCCTCTTAGCTCAT 60.020 41.667 0.00 0.00 44.11 2.90
3540 6896 3.324846 TGAACTGAAAGCCTCTTAGCTCA 59.675 43.478 0.00 0.00 44.11 4.26
3541 6897 3.931578 TGAACTGAAAGCCTCTTAGCTC 58.068 45.455 0.00 0.00 44.11 4.09
3543 6899 4.153296 GTCTTGAACTGAAAGCCTCTTAGC 59.847 45.833 0.00 0.00 37.60 3.09
3544 6900 4.693095 GGTCTTGAACTGAAAGCCTCTTAG 59.307 45.833 0.00 0.00 37.60 2.18
3545 6901 4.505039 GGGTCTTGAACTGAAAGCCTCTTA 60.505 45.833 0.00 0.00 37.60 2.10
3546 6902 3.481453 GGTCTTGAACTGAAAGCCTCTT 58.519 45.455 0.00 0.00 37.60 2.85
3547 6903 2.224646 GGGTCTTGAACTGAAAGCCTCT 60.225 50.000 0.00 0.00 37.60 3.69
3548 6904 2.155279 GGGTCTTGAACTGAAAGCCTC 58.845 52.381 0.00 0.00 37.60 4.70
3549 6905 1.777272 AGGGTCTTGAACTGAAAGCCT 59.223 47.619 0.00 0.00 37.60 4.58
3550 6906 1.882623 CAGGGTCTTGAACTGAAAGCC 59.117 52.381 0.00 0.00 37.60 4.35
3551 6907 1.268079 GCAGGGTCTTGAACTGAAAGC 59.732 52.381 0.00 0.00 37.60 3.51
3552 6908 1.882623 GGCAGGGTCTTGAACTGAAAG 59.117 52.381 0.00 0.00 42.29 2.62
3553 6909 1.214175 TGGCAGGGTCTTGAACTGAAA 59.786 47.619 0.00 0.00 34.21 2.69
3554 6910 0.843309 TGGCAGGGTCTTGAACTGAA 59.157 50.000 0.00 0.00 34.21 3.02
3555 6911 0.843309 TTGGCAGGGTCTTGAACTGA 59.157 50.000 0.00 0.00 34.21 3.41
3556 6912 1.542915 CATTGGCAGGGTCTTGAACTG 59.457 52.381 0.00 0.00 35.40 3.16
3557 6913 1.145738 ACATTGGCAGGGTCTTGAACT 59.854 47.619 0.00 0.00 0.00 3.01
3558 6914 1.620822 ACATTGGCAGGGTCTTGAAC 58.379 50.000 0.00 0.00 0.00 3.18
3559 6915 2.375174 ACTACATTGGCAGGGTCTTGAA 59.625 45.455 0.00 0.00 0.00 2.69
3560 6916 1.985159 ACTACATTGGCAGGGTCTTGA 59.015 47.619 0.00 0.00 0.00 3.02
3561 6917 2.496899 ACTACATTGGCAGGGTCTTG 57.503 50.000 0.00 0.00 0.00 3.02
3562 6918 4.862641 AATACTACATTGGCAGGGTCTT 57.137 40.909 0.00 0.00 0.00 3.01
3563 6919 5.968676 TTAATACTACATTGGCAGGGTCT 57.031 39.130 0.00 0.00 0.00 3.85
3564 6920 7.399245 TTTTTAATACTACATTGGCAGGGTC 57.601 36.000 0.00 0.00 0.00 4.46
3585 6941 2.595386 GCAATCATCGGCTTCGTTTTT 58.405 42.857 0.00 0.00 35.06 1.94
3586 6942 1.135402 GGCAATCATCGGCTTCGTTTT 60.135 47.619 0.00 0.00 35.06 2.43
3587 6943 0.451783 GGCAATCATCGGCTTCGTTT 59.548 50.000 0.00 0.00 35.06 3.60
3588 6944 0.676466 TGGCAATCATCGGCTTCGTT 60.676 50.000 0.00 0.00 35.06 3.85
3589 6945 1.078497 TGGCAATCATCGGCTTCGT 60.078 52.632 0.00 0.00 35.06 3.85
3590 6946 1.353103 GTGGCAATCATCGGCTTCG 59.647 57.895 0.00 0.00 0.00 3.79
3591 6947 0.099436 GTGTGGCAATCATCGGCTTC 59.901 55.000 0.00 0.00 0.00 3.86
3592 6948 1.647545 CGTGTGGCAATCATCGGCTT 61.648 55.000 0.00 0.00 0.00 4.35
3593 6949 2.108514 CGTGTGGCAATCATCGGCT 61.109 57.895 0.00 0.00 0.00 5.52
3594 6950 2.398554 ACGTGTGGCAATCATCGGC 61.399 57.895 0.00 0.00 32.82 5.54
3595 6951 1.298157 ACACGTGTGGCAATCATCGG 61.298 55.000 22.71 0.00 32.82 4.18
3596 6952 0.179217 CACACGTGTGGCAATCATCG 60.179 55.000 35.65 10.61 42.10 3.84
3597 6953 3.681705 CACACGTGTGGCAATCATC 57.318 52.632 35.65 0.00 42.10 2.92
3606 6962 1.070821 CACTAGATGCCACACGTGTG 58.929 55.000 36.13 36.13 45.23 3.82
3607 6963 0.037326 CCACTAGATGCCACACGTGT 60.037 55.000 17.22 17.22 0.00 4.49
3608 6964 0.740868 CCCACTAGATGCCACACGTG 60.741 60.000 15.48 15.48 0.00 4.49
3609 6965 1.596934 CCCACTAGATGCCACACGT 59.403 57.895 0.00 0.00 0.00 4.49
3610 6966 1.153369 CCCCACTAGATGCCACACG 60.153 63.158 0.00 0.00 0.00 4.49
3611 6967 0.328258 AACCCCACTAGATGCCACAC 59.672 55.000 0.00 0.00 0.00 3.82
3612 6968 0.327924 CAACCCCACTAGATGCCACA 59.672 55.000 0.00 0.00 0.00 4.17
3613 6969 0.328258 ACAACCCCACTAGATGCCAC 59.672 55.000 0.00 0.00 0.00 5.01
3614 6970 0.327924 CACAACCCCACTAGATGCCA 59.672 55.000 0.00 0.00 0.00 4.92
3615 6971 1.032114 GCACAACCCCACTAGATGCC 61.032 60.000 0.00 0.00 0.00 4.40
3616 6972 1.032114 GGCACAACCCCACTAGATGC 61.032 60.000 0.00 0.00 0.00 3.91
3617 6973 0.744414 CGGCACAACCCCACTAGATG 60.744 60.000 0.00 0.00 33.26 2.90
3618 6974 1.602237 CGGCACAACCCCACTAGAT 59.398 57.895 0.00 0.00 33.26 1.98
3619 6975 3.065306 CGGCACAACCCCACTAGA 58.935 61.111 0.00 0.00 33.26 2.43
3620 6976 2.746277 GCGGCACAACCCCACTAG 60.746 66.667 0.00 0.00 33.26 2.57
3621 6977 3.561241 TGCGGCACAACCCCACTA 61.561 61.111 0.00 0.00 33.26 2.74
3643 6999 3.036084 CGTCTCCGTGCCACACAC 61.036 66.667 0.00 0.00 46.45 3.82
3644 7000 3.220658 TCGTCTCCGTGCCACACA 61.221 61.111 0.00 0.00 33.40 3.72
3645 7001 2.733593 GTCGTCTCCGTGCCACAC 60.734 66.667 0.00 0.00 35.01 3.82
3646 7002 3.986006 GGTCGTCTCCGTGCCACA 61.986 66.667 0.00 0.00 35.01 4.17
3647 7003 4.736896 GGGTCGTCTCCGTGCCAC 62.737 72.222 0.00 0.00 33.92 5.01


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.