Multiple sequence alignment - TraesCS4B01G015400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G015400 chr4B 100.000 2992 0 0 1 2992 11608428 11611419 0.000000e+00 5526
1 TraesCS4B01G015400 chr4B 82.482 274 43 5 599 870 97889993 97889723 4.990000e-58 235
2 TraesCS4B01G015400 chr4B 81.685 273 46 4 599 869 97792617 97792347 1.080000e-54 224
3 TraesCS4B01G015400 chr1D 94.774 1129 55 3 1377 2501 327013892 327015020 0.000000e+00 1755
4 TraesCS4B01G015400 chr1D 95.925 589 21 3 1 588 327012034 327012620 0.000000e+00 952
5 TraesCS4B01G015400 chr5B 84.406 1802 237 29 737 2508 345811169 345812956 0.000000e+00 1731
6 TraesCS4B01G015400 chr5B 94.490 1089 41 4 1377 2460 524503114 524504188 0.000000e+00 1661
7 TraesCS4B01G015400 chr5B 86.010 1544 183 19 980 2498 474614614 474613079 0.000000e+00 1624
8 TraesCS4B01G015400 chr5B 92.901 648 43 3 742 1388 524502376 524503021 0.000000e+00 939
9 TraesCS4B01G015400 chr5B 96.867 383 12 0 2610 2992 485562362 485561980 2.510000e-180 641
10 TraesCS4B01G015400 chr5B 96.623 385 12 1 2609 2992 556811060 556810676 3.250000e-179 638
11 TraesCS4B01G015400 chr1A 94.013 1119 57 4 1387 2501 382100920 382102032 0.000000e+00 1687
12 TraesCS4B01G015400 chr1A 89.937 795 72 2 594 1388 382100103 382100889 0.000000e+00 1018
13 TraesCS4B01G015400 chr1A 95.593 590 23 3 1 589 382098952 382099539 0.000000e+00 942
14 TraesCS4B01G015400 chr1A 95.254 590 25 3 1 589 462342448 462343035 0.000000e+00 931
15 TraesCS4B01G015400 chr1A 90.673 654 56 5 737 1388 462343845 462344495 0.000000e+00 865
16 TraesCS4B01G015400 chr1A 92.687 588 38 5 2 588 2284480 2283897 0.000000e+00 843
17 TraesCS4B01G015400 chr2A 85.237 1558 186 25 599 2125 173514812 173513268 0.000000e+00 1563
18 TraesCS4B01G015400 chr2A 84.299 656 78 11 1867 2499 572845734 572846387 4.240000e-173 617
19 TraesCS4B01G015400 chr6A 84.427 1554 200 29 599 2125 511525802 511527340 0.000000e+00 1491
20 TraesCS4B01G015400 chr7B 90.720 1056 94 4 1377 2429 88977552 88976498 0.000000e+00 1404
21 TraesCS4B01G015400 chr4D 87.674 1152 114 15 1377 2503 79009904 79011052 0.000000e+00 1315
22 TraesCS4B01G015400 chr4D 94.427 646 33 3 744 1388 349959022 349959665 0.000000e+00 990
23 TraesCS4B01G015400 chr4D 95.756 589 21 4 1 589 349940814 349941398 0.000000e+00 946
24 TraesCS4B01G015400 chr6B 94.919 807 39 2 1387 2191 673017017 673017823 0.000000e+00 1262
25 TraesCS4B01G015400 chr6B 95.763 590 22 3 1 589 673015647 673016234 0.000000e+00 948
26 TraesCS4B01G015400 chr6B 97.135 384 11 0 2609 2992 47155666 47155283 0.000000e+00 649
27 TraesCS4B01G015400 chr4A 91.924 842 63 2 1660 2499 340510971 340511809 0.000000e+00 1173
28 TraesCS4B01G015400 chr6D 94.061 724 31 6 1780 2499 143474196 143474911 0.000000e+00 1088
29 TraesCS4B01G015400 chr6D 94.040 604 35 1 785 1388 208550450 208549848 0.000000e+00 915
30 TraesCS4B01G015400 chr6D 94.576 590 30 2 1 589 208551752 208551164 0.000000e+00 911
31 TraesCS4B01G015400 chr6D 91.530 366 28 1 2140 2502 437344738 437344373 4.450000e-138 501
32 TraesCS4B01G015400 chr6D 87.591 274 34 0 594 867 208550600 208550327 4.810000e-83 318
33 TraesCS4B01G015400 chr5A 88.851 879 84 11 1377 2249 354275323 354276193 0.000000e+00 1068
34 TraesCS4B01G015400 chr5A 95.593 590 22 4 1 589 354273187 354273773 0.000000e+00 942
35 TraesCS4B01G015400 chr5A 90.108 647 58 6 744 1388 354274588 354275230 0.000000e+00 835
36 TraesCS4B01G015400 chr3D 92.724 591 37 4 1 589 598637936 598637350 0.000000e+00 848
37 TraesCS4B01G015400 chr3D 94.866 409 18 2 2098 2503 91381611 91381203 1.170000e-178 636
38 TraesCS4B01G015400 chr1B 97.128 383 11 0 2610 2992 437565627 437566009 0.000000e+00 647
39 TraesCS4B01G015400 chr1B 96.883 385 10 2 2610 2992 436275966 436276350 0.000000e+00 643
40 TraesCS4B01G015400 chr1B 96.867 383 12 0 2610 2992 61511578 61511960 2.510000e-180 641
41 TraesCS4B01G015400 chr3B 96.891 386 11 1 2608 2992 30772991 30773376 0.000000e+00 645
42 TraesCS4B01G015400 chr2B 96.883 385 11 1 2609 2992 759539370 759538986 0.000000e+00 643
43 TraesCS4B01G015400 chr2B 96.615 384 13 0 2609 2992 174981682 174982065 3.250000e-179 638
44 TraesCS4B01G015400 chr5D 94.974 378 16 3 2125 2499 47010383 47010760 9.240000e-165 590


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G015400 chr4B 11608428 11611419 2991 False 5526.000000 5526 100.000000 1 2992 1 chr4B.!!$F1 2991
1 TraesCS4B01G015400 chr1D 327012034 327015020 2986 False 1353.500000 1755 95.349500 1 2501 2 chr1D.!!$F1 2500
2 TraesCS4B01G015400 chr5B 345811169 345812956 1787 False 1731.000000 1731 84.406000 737 2508 1 chr5B.!!$F1 1771
3 TraesCS4B01G015400 chr5B 474613079 474614614 1535 True 1624.000000 1624 86.010000 980 2498 1 chr5B.!!$R1 1518
4 TraesCS4B01G015400 chr5B 524502376 524504188 1812 False 1300.000000 1661 93.695500 742 2460 2 chr5B.!!$F2 1718
5 TraesCS4B01G015400 chr1A 382098952 382102032 3080 False 1215.666667 1687 93.181000 1 2501 3 chr1A.!!$F1 2500
6 TraesCS4B01G015400 chr1A 462342448 462344495 2047 False 898.000000 931 92.963500 1 1388 2 chr1A.!!$F2 1387
7 TraesCS4B01G015400 chr1A 2283897 2284480 583 True 843.000000 843 92.687000 2 588 1 chr1A.!!$R1 586
8 TraesCS4B01G015400 chr2A 173513268 173514812 1544 True 1563.000000 1563 85.237000 599 2125 1 chr2A.!!$R1 1526
9 TraesCS4B01G015400 chr2A 572845734 572846387 653 False 617.000000 617 84.299000 1867 2499 1 chr2A.!!$F1 632
10 TraesCS4B01G015400 chr6A 511525802 511527340 1538 False 1491.000000 1491 84.427000 599 2125 1 chr6A.!!$F1 1526
11 TraesCS4B01G015400 chr7B 88976498 88977552 1054 True 1404.000000 1404 90.720000 1377 2429 1 chr7B.!!$R1 1052
12 TraesCS4B01G015400 chr4D 79009904 79011052 1148 False 1315.000000 1315 87.674000 1377 2503 1 chr4D.!!$F1 1126
13 TraesCS4B01G015400 chr4D 349959022 349959665 643 False 990.000000 990 94.427000 744 1388 1 chr4D.!!$F3 644
14 TraesCS4B01G015400 chr4D 349940814 349941398 584 False 946.000000 946 95.756000 1 589 1 chr4D.!!$F2 588
15 TraesCS4B01G015400 chr6B 673015647 673017823 2176 False 1105.000000 1262 95.341000 1 2191 2 chr6B.!!$F1 2190
16 TraesCS4B01G015400 chr4A 340510971 340511809 838 False 1173.000000 1173 91.924000 1660 2499 1 chr4A.!!$F1 839
17 TraesCS4B01G015400 chr6D 143474196 143474911 715 False 1088.000000 1088 94.061000 1780 2499 1 chr6D.!!$F1 719
18 TraesCS4B01G015400 chr6D 208549848 208551752 1904 True 714.666667 915 92.069000 1 1388 3 chr6D.!!$R2 1387
19 TraesCS4B01G015400 chr5A 354273187 354276193 3006 False 948.333333 1068 91.517333 1 2249 3 chr5A.!!$F1 2248
20 TraesCS4B01G015400 chr3D 598637350 598637936 586 True 848.000000 848 92.724000 1 589 1 chr3D.!!$R2 588

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
341 342 3.729108 TGGGGAGTTGAGAGATGAGATT 58.271 45.455 0.00 0.0 0.00 2.40 F
1299 2125 1.224592 GGGCCACACTCAGGTATGG 59.775 63.158 4.39 0.0 42.54 2.74 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1666 2597 0.191064 AGGTGAAGGGTCCTGAGTGA 59.809 55.0 0.00 0.00 32.29 3.41 R
2557 3519 0.039527 GGCCTGTTTAACACGGCTTG 60.040 55.0 25.62 5.88 40.15 4.01 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
229 230 6.892658 TGCCATGTTTCTTTATGTAGTTGT 57.107 33.333 0.00 0.00 0.00 3.32
341 342 3.729108 TGGGGAGTTGAGAGATGAGATT 58.271 45.455 0.00 0.00 0.00 2.40
642 1203 6.297080 TGAATTTGCAAATCATATGTGGGT 57.703 33.333 24.28 5.29 0.00 4.51
666 1227 5.590259 TGAATAGAGGGCTAGCAAACATTTC 59.410 40.000 18.24 12.36 0.00 2.17
684 1247 7.692460 ACATTTCATGTATCATGTGTCTTGT 57.308 32.000 9.13 5.63 42.78 3.16
726 1289 6.787225 TGTGTGACTTGGTATTGTAAAACAC 58.213 36.000 0.00 0.00 0.00 3.32
812 1511 7.984422 TGTGCTGGAATATCATATTTAGGTG 57.016 36.000 0.00 0.00 0.00 4.00
813 1512 6.430925 TGTGCTGGAATATCATATTTAGGTGC 59.569 38.462 0.00 0.00 0.00 5.01
814 1513 6.656693 GTGCTGGAATATCATATTTAGGTGCT 59.343 38.462 0.00 0.00 0.00 4.40
815 1514 6.656270 TGCTGGAATATCATATTTAGGTGCTG 59.344 38.462 0.00 0.00 0.00 4.41
816 1515 6.094603 GCTGGAATATCATATTTAGGTGCTGG 59.905 42.308 0.00 0.00 0.00 4.85
817 1516 7.328404 TGGAATATCATATTTAGGTGCTGGA 57.672 36.000 0.00 0.00 0.00 3.86
818 1517 7.754624 TGGAATATCATATTTAGGTGCTGGAA 58.245 34.615 0.00 0.00 0.00 3.53
819 1518 8.393259 TGGAATATCATATTTAGGTGCTGGAAT 58.607 33.333 0.00 0.00 0.00 3.01
820 1519 9.905713 GGAATATCATATTTAGGTGCTGGAATA 57.094 33.333 0.00 0.00 0.00 1.75
876 1680 4.455533 TGCTGAAATATGTTTTCGAGCTGT 59.544 37.500 17.56 0.00 35.55 4.40
887 1691 5.106712 TGTTTTCGAGCTGTTGGAATATCAC 60.107 40.000 0.00 0.00 0.00 3.06
999 1825 1.506028 CCAAGAAGGCCCCCAAGGTA 61.506 60.000 0.00 0.00 38.26 3.08
1023 1849 1.794714 ATTGGACTCGGCCTATGTCT 58.205 50.000 15.74 0.00 0.00 3.41
1032 1858 2.158769 TCGGCCTATGTCTGCAATGATT 60.159 45.455 0.00 0.00 0.00 2.57
1071 1897 1.678970 GGCGGAAAGAGGTGCCAAT 60.679 57.895 0.00 0.00 46.76 3.16
1144 1970 3.071479 TCTGCTTTCGTTGGTTATGACC 58.929 45.455 0.00 0.00 46.71 4.02
1299 2125 1.224592 GGGCCACACTCAGGTATGG 59.775 63.158 4.39 0.00 42.54 2.74
1325 2151 6.352516 TGCACATTTATCAACCCTTTTTGTT 58.647 32.000 0.00 0.00 0.00 2.83
1373 2199 4.882427 TGAAACGGTGTTGGAATGAGTTAA 59.118 37.500 0.00 0.00 0.00 2.01
1649 2580 3.745799 TCTTCCTAGATCTAGCTCCGTG 58.254 50.000 22.33 9.24 31.95 4.94
1666 2597 2.029290 CCGTGCTTCCAACTACTAGTGT 60.029 50.000 5.39 0.00 0.00 3.55
1994 2926 4.096081 GCCAATCCTGATCTTCTTTGAGTG 59.904 45.833 0.00 0.00 0.00 3.51
1995 2927 5.251764 CCAATCCTGATCTTCTTTGAGTGT 58.748 41.667 0.00 0.00 0.00 3.55
2320 3282 3.758023 CTCATGCAATCTACCAAACACCA 59.242 43.478 0.00 0.00 0.00 4.17
2460 3422 3.463048 AAGCATGTCTCAAAGGGGAAT 57.537 42.857 0.00 0.00 0.00 3.01
2462 3424 4.162040 AGCATGTCTCAAAGGGGAATAG 57.838 45.455 0.00 0.00 0.00 1.73
2503 3465 2.552373 GCTACCAAACACACCCTTAGCT 60.552 50.000 0.00 0.00 0.00 3.32
2504 3466 2.271944 ACCAAACACACCCTTAGCTC 57.728 50.000 0.00 0.00 0.00 4.09
2506 3468 2.174854 ACCAAACACACCCTTAGCTCTT 59.825 45.455 0.00 0.00 0.00 2.85
2507 3469 2.554032 CCAAACACACCCTTAGCTCTTG 59.446 50.000 0.00 0.00 0.00 3.02
2508 3470 1.897560 AACACACCCTTAGCTCTTGC 58.102 50.000 0.00 0.00 40.05 4.01
2509 3471 0.320771 ACACACCCTTAGCTCTTGCG 60.321 55.000 0.00 0.00 45.42 4.85
2510 3472 0.320771 CACACCCTTAGCTCTTGCGT 60.321 55.000 0.00 0.00 45.42 5.24
2511 3473 0.037232 ACACCCTTAGCTCTTGCGTC 60.037 55.000 0.00 0.00 45.42 5.19
2512 3474 0.037326 CACCCTTAGCTCTTGCGTCA 60.037 55.000 0.00 0.00 45.42 4.35
2513 3475 0.037232 ACCCTTAGCTCTTGCGTCAC 60.037 55.000 0.00 0.00 45.42 3.67
2514 3476 1.078759 CCCTTAGCTCTTGCGTCACG 61.079 60.000 0.00 0.00 45.42 4.35
2526 3488 3.883779 CGTCACGCAAATCCATGAG 57.116 52.632 0.00 0.00 0.00 2.90
2527 3489 1.358877 CGTCACGCAAATCCATGAGA 58.641 50.000 0.00 0.00 0.00 3.27
2528 3490 1.731709 CGTCACGCAAATCCATGAGAA 59.268 47.619 0.00 0.00 0.00 2.87
2529 3491 2.222886 CGTCACGCAAATCCATGAGAAG 60.223 50.000 0.00 0.00 0.00 2.85
2530 3492 1.739466 TCACGCAAATCCATGAGAAGC 59.261 47.619 0.00 0.00 0.00 3.86
2531 3493 1.469703 CACGCAAATCCATGAGAAGCA 59.530 47.619 0.00 0.00 0.00 3.91
2532 3494 2.098607 CACGCAAATCCATGAGAAGCAT 59.901 45.455 0.00 0.00 37.85 3.79
2551 3513 2.882876 CATGCTTGCAGTCCCAGC 59.117 61.111 0.21 0.21 0.00 4.85
2552 3514 1.974875 CATGCTTGCAGTCCCAGCA 60.975 57.895 12.15 12.15 40.85 4.41
2553 3515 1.677966 ATGCTTGCAGTCCCAGCAG 60.678 57.895 14.77 0.00 43.75 4.24
2554 3516 2.033141 GCTTGCAGTCCCAGCAGA 59.967 61.111 2.44 0.00 43.75 4.26
2555 3517 2.039405 GCTTGCAGTCCCAGCAGAG 61.039 63.158 2.44 0.00 43.75 3.35
2556 3518 1.675801 CTTGCAGTCCCAGCAGAGA 59.324 57.895 0.00 0.00 43.75 3.10
2557 3519 0.673022 CTTGCAGTCCCAGCAGAGAC 60.673 60.000 0.00 0.00 43.75 3.36
2558 3520 1.410050 TTGCAGTCCCAGCAGAGACA 61.410 55.000 0.00 0.00 43.75 3.41
2559 3521 1.372683 GCAGTCCCAGCAGAGACAA 59.627 57.895 0.00 0.00 35.38 3.18
2560 3522 0.673022 GCAGTCCCAGCAGAGACAAG 60.673 60.000 0.00 0.00 35.38 3.16
2561 3523 0.673022 CAGTCCCAGCAGAGACAAGC 60.673 60.000 0.00 0.00 35.38 4.01
2562 3524 1.376553 GTCCCAGCAGAGACAAGCC 60.377 63.158 0.00 0.00 33.08 4.35
2563 3525 2.435586 CCCAGCAGAGACAAGCCG 60.436 66.667 0.00 0.00 0.00 5.52
2564 3526 2.345244 CCAGCAGAGACAAGCCGT 59.655 61.111 0.00 0.00 0.00 5.68
2565 3527 2.031516 CCAGCAGAGACAAGCCGTG 61.032 63.158 0.00 0.00 0.00 4.94
2566 3528 1.301244 CAGCAGAGACAAGCCGTGT 60.301 57.895 0.00 0.00 45.74 4.49
2567 3529 0.882042 CAGCAGAGACAAGCCGTGTT 60.882 55.000 0.00 0.00 41.96 3.32
2568 3530 0.679505 AGCAGAGACAAGCCGTGTTA 59.320 50.000 0.00 0.00 41.96 2.41
2569 3531 1.070134 AGCAGAGACAAGCCGTGTTAA 59.930 47.619 0.00 0.00 41.96 2.01
2570 3532 1.871039 GCAGAGACAAGCCGTGTTAAA 59.129 47.619 0.00 0.00 41.96 1.52
2571 3533 2.349532 GCAGAGACAAGCCGTGTTAAAC 60.350 50.000 0.00 0.00 41.96 2.01
2572 3534 2.869801 CAGAGACAAGCCGTGTTAAACA 59.130 45.455 0.00 0.00 41.96 2.83
2573 3535 3.059597 CAGAGACAAGCCGTGTTAAACAG 60.060 47.826 0.00 0.00 41.96 3.16
2574 3536 2.218603 AGACAAGCCGTGTTAAACAGG 58.781 47.619 0.00 0.00 41.96 4.00
2575 3537 0.666374 ACAAGCCGTGTTAAACAGGC 59.334 50.000 9.66 9.66 44.09 4.85
2576 3538 0.039527 CAAGCCGTGTTAAACAGGCC 60.040 55.000 12.91 0.00 44.53 5.19
2577 3539 0.466555 AAGCCGTGTTAAACAGGCCA 60.467 50.000 5.01 0.00 44.53 5.36
2578 3540 0.251165 AGCCGTGTTAAACAGGCCAT 60.251 50.000 5.01 0.00 44.53 4.40
2579 3541 1.003812 AGCCGTGTTAAACAGGCCATA 59.996 47.619 5.01 0.00 44.53 2.74
2580 3542 1.400494 GCCGTGTTAAACAGGCCATAG 59.600 52.381 5.01 0.00 40.45 2.23
2581 3543 2.014128 CCGTGTTAAACAGGCCATAGG 58.986 52.381 5.01 0.00 33.03 2.57
2582 3544 2.617021 CCGTGTTAAACAGGCCATAGGT 60.617 50.000 5.01 0.00 33.03 3.08
2583 3545 3.078837 CGTGTTAAACAGGCCATAGGTT 58.921 45.455 5.01 1.27 0.00 3.50
2584 3546 3.119990 CGTGTTAAACAGGCCATAGGTTG 60.120 47.826 5.01 0.00 0.00 3.77
2585 3547 4.076394 GTGTTAAACAGGCCATAGGTTGA 58.924 43.478 5.01 0.00 0.00 3.18
2586 3548 4.705023 GTGTTAAACAGGCCATAGGTTGAT 59.295 41.667 5.01 0.00 0.00 2.57
2587 3549 4.704540 TGTTAAACAGGCCATAGGTTGATG 59.295 41.667 5.01 0.00 0.00 3.07
2588 3550 3.737559 AAACAGGCCATAGGTTGATGA 57.262 42.857 5.01 0.00 0.00 2.92
2589 3551 3.959495 AACAGGCCATAGGTTGATGAT 57.041 42.857 5.01 0.00 0.00 2.45
2590 3552 3.498774 ACAGGCCATAGGTTGATGATC 57.501 47.619 5.01 0.00 0.00 2.92
2591 3553 2.779430 ACAGGCCATAGGTTGATGATCA 59.221 45.455 5.01 0.00 0.00 2.92
2592 3554 3.181447 ACAGGCCATAGGTTGATGATCAG 60.181 47.826 5.01 0.00 0.00 2.90
2593 3555 3.051581 AGGCCATAGGTTGATGATCAGT 58.948 45.455 5.01 0.00 0.00 3.41
2594 3556 3.072184 AGGCCATAGGTTGATGATCAGTC 59.928 47.826 5.01 0.00 0.00 3.51
2595 3557 3.406764 GCCATAGGTTGATGATCAGTCC 58.593 50.000 0.09 9.62 0.00 3.85
2596 3558 3.808618 GCCATAGGTTGATGATCAGTCCC 60.809 52.174 0.09 7.24 0.00 4.46
2597 3559 3.392285 CCATAGGTTGATGATCAGTCCCA 59.608 47.826 0.09 3.23 0.00 4.37
2598 3560 4.504514 CCATAGGTTGATGATCAGTCCCAG 60.505 50.000 0.09 5.81 0.00 4.45
2599 3561 2.837947 AGGTTGATGATCAGTCCCAGA 58.162 47.619 0.09 0.00 0.00 3.86
2600 3562 2.503356 AGGTTGATGATCAGTCCCAGAC 59.497 50.000 0.09 0.14 0.00 3.51
2601 3563 2.544685 GTTGATGATCAGTCCCAGACG 58.455 52.381 0.09 0.00 37.67 4.18
2602 3564 2.143876 TGATGATCAGTCCCAGACGA 57.856 50.000 0.09 0.00 37.67 4.20
2603 3565 2.027385 TGATGATCAGTCCCAGACGAG 58.973 52.381 0.09 0.00 37.67 4.18
2604 3566 2.028130 GATGATCAGTCCCAGACGAGT 58.972 52.381 0.09 0.00 37.67 4.18
2605 3567 1.464734 TGATCAGTCCCAGACGAGTC 58.535 55.000 0.00 0.00 37.67 3.36
2606 3568 0.378962 GATCAGTCCCAGACGAGTCG 59.621 60.000 11.85 11.85 37.67 4.18
2607 3569 0.322636 ATCAGTCCCAGACGAGTCGT 60.323 55.000 20.02 20.02 45.10 4.34
2616 3578 3.048602 ACGAGTCGTCTGTTGGGG 58.951 61.111 13.56 0.00 33.69 4.96
2617 3579 1.529948 ACGAGTCGTCTGTTGGGGA 60.530 57.895 13.56 0.00 33.69 4.81
2618 3580 1.111116 ACGAGTCGTCTGTTGGGGAA 61.111 55.000 13.56 0.00 33.69 3.97
2619 3581 0.666577 CGAGTCGTCTGTTGGGGAAC 60.667 60.000 3.82 0.00 0.00 3.62
2620 3582 0.666577 GAGTCGTCTGTTGGGGAACG 60.667 60.000 0.00 0.00 0.00 3.95
2621 3583 1.068585 GTCGTCTGTTGGGGAACGT 59.931 57.895 0.00 0.00 0.00 3.99
2622 3584 0.531311 GTCGTCTGTTGGGGAACGTT 60.531 55.000 0.00 0.00 0.00 3.99
2623 3585 0.531090 TCGTCTGTTGGGGAACGTTG 60.531 55.000 5.00 0.00 0.00 4.10
2624 3586 1.652563 GTCTGTTGGGGAACGTTGC 59.347 57.895 11.85 11.85 0.00 4.17
2625 3587 1.098712 GTCTGTTGGGGAACGTTGCA 61.099 55.000 21.74 0.00 0.00 4.08
2626 3588 0.817634 TCTGTTGGGGAACGTTGCAG 60.818 55.000 21.74 9.73 0.00 4.41
2627 3589 0.817634 CTGTTGGGGAACGTTGCAGA 60.818 55.000 21.74 3.97 0.00 4.26
2628 3590 0.394488 TGTTGGGGAACGTTGCAGAA 60.394 50.000 21.74 10.10 0.00 3.02
2629 3591 0.741915 GTTGGGGAACGTTGCAGAAA 59.258 50.000 21.74 9.26 0.00 2.52
2630 3592 1.135333 GTTGGGGAACGTTGCAGAAAA 59.865 47.619 21.74 6.84 0.00 2.29
2631 3593 1.698506 TGGGGAACGTTGCAGAAAAT 58.301 45.000 21.74 0.00 0.00 1.82
2632 3594 2.865079 TGGGGAACGTTGCAGAAAATA 58.135 42.857 21.74 0.00 0.00 1.40
2633 3595 3.223435 TGGGGAACGTTGCAGAAAATAA 58.777 40.909 21.74 0.00 0.00 1.40
2634 3596 3.637229 TGGGGAACGTTGCAGAAAATAAA 59.363 39.130 21.74 0.00 0.00 1.40
2635 3597 4.099573 TGGGGAACGTTGCAGAAAATAAAA 59.900 37.500 21.74 0.00 0.00 1.52
2636 3598 5.051153 GGGGAACGTTGCAGAAAATAAAAA 58.949 37.500 21.74 0.00 0.00 1.94
2657 3619 6.575162 AAAAATTCTACGCTTCACCAAGAT 57.425 33.333 0.00 0.00 0.00 2.40
2658 3620 5.803020 AAATTCTACGCTTCACCAAGATC 57.197 39.130 0.00 0.00 0.00 2.75
2659 3621 3.953712 TTCTACGCTTCACCAAGATCA 57.046 42.857 0.00 0.00 0.00 2.92
2660 3622 3.953712 TCTACGCTTCACCAAGATCAA 57.046 42.857 0.00 0.00 0.00 2.57
2661 3623 4.471904 TCTACGCTTCACCAAGATCAAT 57.528 40.909 0.00 0.00 0.00 2.57
2662 3624 4.433615 TCTACGCTTCACCAAGATCAATC 58.566 43.478 0.00 0.00 0.00 2.67
2663 3625 3.340814 ACGCTTCACCAAGATCAATCT 57.659 42.857 0.00 0.00 39.22 2.40
2664 3626 4.471904 ACGCTTCACCAAGATCAATCTA 57.528 40.909 0.00 0.00 35.76 1.98
2665 3627 5.028549 ACGCTTCACCAAGATCAATCTAT 57.971 39.130 0.00 0.00 35.76 1.98
2666 3628 4.813161 ACGCTTCACCAAGATCAATCTATG 59.187 41.667 0.00 0.00 35.76 2.23
2667 3629 4.212847 CGCTTCACCAAGATCAATCTATGG 59.787 45.833 14.46 14.46 39.18 2.74
2668 3630 5.371526 GCTTCACCAAGATCAATCTATGGA 58.628 41.667 19.34 4.80 37.92 3.41
2669 3631 5.469421 GCTTCACCAAGATCAATCTATGGAG 59.531 44.000 19.34 14.57 37.92 3.86
2670 3632 6.566079 TTCACCAAGATCAATCTATGGAGT 57.434 37.500 19.34 4.58 37.92 3.85
2671 3633 6.166984 TCACCAAGATCAATCTATGGAGTC 57.833 41.667 19.34 0.00 37.92 3.36
2672 3634 5.662657 TCACCAAGATCAATCTATGGAGTCA 59.337 40.000 19.34 3.88 37.92 3.41
2673 3635 6.328410 TCACCAAGATCAATCTATGGAGTCAT 59.672 38.462 19.34 0.00 37.92 3.06
2674 3636 6.427242 CACCAAGATCAATCTATGGAGTCATG 59.573 42.308 19.34 0.00 37.92 3.07
2675 3637 6.100859 ACCAAGATCAATCTATGGAGTCATGT 59.899 38.462 19.34 2.69 37.92 3.21
2676 3638 7.290948 ACCAAGATCAATCTATGGAGTCATGTA 59.709 37.037 19.34 0.00 37.92 2.29
2677 3639 7.818446 CCAAGATCAATCTATGGAGTCATGTAG 59.182 40.741 12.26 0.00 37.31 2.74
2678 3640 6.934056 AGATCAATCTATGGAGTCATGTAGC 58.066 40.000 0.00 0.00 34.85 3.58
2679 3641 6.496218 AGATCAATCTATGGAGTCATGTAGCA 59.504 38.462 0.00 0.00 34.85 3.49
2680 3642 6.484364 TCAATCTATGGAGTCATGTAGCAA 57.516 37.500 0.00 0.00 34.96 3.91
2681 3643 6.283694 TCAATCTATGGAGTCATGTAGCAAC 58.716 40.000 0.00 0.00 34.96 4.17
2682 3644 4.307443 TCTATGGAGTCATGTAGCAACG 57.693 45.455 0.00 0.00 34.96 4.10
2683 3645 3.951680 TCTATGGAGTCATGTAGCAACGA 59.048 43.478 0.00 0.00 34.96 3.85
2684 3646 2.654749 TGGAGTCATGTAGCAACGAG 57.345 50.000 0.00 0.00 0.00 4.18
2685 3647 2.167662 TGGAGTCATGTAGCAACGAGA 58.832 47.619 0.00 0.00 0.00 4.04
2686 3648 2.164422 TGGAGTCATGTAGCAACGAGAG 59.836 50.000 0.00 0.00 0.00 3.20
2687 3649 2.423892 GGAGTCATGTAGCAACGAGAGA 59.576 50.000 0.00 0.00 0.00 3.10
2688 3650 3.488384 GGAGTCATGTAGCAACGAGAGAG 60.488 52.174 0.00 0.00 0.00 3.20
2689 3651 3.348119 AGTCATGTAGCAACGAGAGAGA 58.652 45.455 0.00 0.00 0.00 3.10
2690 3652 3.376859 AGTCATGTAGCAACGAGAGAGAG 59.623 47.826 0.00 0.00 0.00 3.20
2691 3653 2.685388 TCATGTAGCAACGAGAGAGAGG 59.315 50.000 0.00 0.00 0.00 3.69
2692 3654 2.491675 TGTAGCAACGAGAGAGAGGA 57.508 50.000 0.00 0.00 0.00 3.71
2693 3655 2.360844 TGTAGCAACGAGAGAGAGGAG 58.639 52.381 0.00 0.00 0.00 3.69
2694 3656 2.290387 TGTAGCAACGAGAGAGAGGAGT 60.290 50.000 0.00 0.00 0.00 3.85
2695 3657 1.173043 AGCAACGAGAGAGAGGAGTG 58.827 55.000 0.00 0.00 0.00 3.51
2696 3658 0.457681 GCAACGAGAGAGAGGAGTGC 60.458 60.000 0.00 0.00 0.00 4.40
2697 3659 0.884514 CAACGAGAGAGAGGAGTGCA 59.115 55.000 0.00 0.00 0.00 4.57
2698 3660 1.476085 CAACGAGAGAGAGGAGTGCAT 59.524 52.381 0.00 0.00 0.00 3.96
2699 3661 1.388547 ACGAGAGAGAGGAGTGCATC 58.611 55.000 0.00 0.00 0.00 3.91
2700 3662 1.064758 ACGAGAGAGAGGAGTGCATCT 60.065 52.381 0.00 0.00 37.98 2.90
2701 3663 2.171659 ACGAGAGAGAGGAGTGCATCTA 59.828 50.000 0.00 0.00 34.88 1.98
2702 3664 2.548057 CGAGAGAGAGGAGTGCATCTAC 59.452 54.545 0.00 0.00 34.88 2.59
2703 3665 3.550820 GAGAGAGAGGAGTGCATCTACA 58.449 50.000 0.00 0.00 34.88 2.74
2704 3666 4.144297 GAGAGAGAGGAGTGCATCTACAT 58.856 47.826 0.00 0.00 34.88 2.29
2705 3667 5.312895 GAGAGAGAGGAGTGCATCTACATA 58.687 45.833 0.00 0.00 34.88 2.29
2706 3668 5.070001 AGAGAGAGGAGTGCATCTACATAC 58.930 45.833 0.00 0.00 34.88 2.39
2707 3669 4.148838 AGAGAGGAGTGCATCTACATACC 58.851 47.826 0.00 0.00 34.88 2.73
2708 3670 3.235200 AGAGGAGTGCATCTACATACCC 58.765 50.000 0.00 0.00 32.55 3.69
2709 3671 3.116939 AGAGGAGTGCATCTACATACCCT 60.117 47.826 0.00 0.00 32.55 4.34
2710 3672 3.643792 GAGGAGTGCATCTACATACCCTT 59.356 47.826 0.00 0.00 0.00 3.95
2711 3673 3.389329 AGGAGTGCATCTACATACCCTTG 59.611 47.826 0.00 0.00 0.00 3.61
2712 3674 3.134804 GGAGTGCATCTACATACCCTTGT 59.865 47.826 0.00 0.00 0.00 3.16
2713 3675 4.344102 GGAGTGCATCTACATACCCTTGTA 59.656 45.833 0.00 0.00 0.00 2.41
2714 3676 5.509840 GGAGTGCATCTACATACCCTTGTAG 60.510 48.000 5.47 5.47 46.85 2.74
2722 3684 4.920640 ACATACCCTTGTAGATCACGAG 57.079 45.455 0.00 0.78 38.28 4.18
2723 3685 3.068307 ACATACCCTTGTAGATCACGAGC 59.932 47.826 0.00 0.00 37.34 5.03
2724 3686 0.456221 ACCCTTGTAGATCACGAGCG 59.544 55.000 0.00 0.00 37.34 5.03
2725 3687 0.249073 CCCTTGTAGATCACGAGCGG 60.249 60.000 0.00 1.66 37.34 5.52
2726 3688 0.738975 CCTTGTAGATCACGAGCGGA 59.261 55.000 0.00 0.00 37.34 5.54
2727 3689 1.134367 CCTTGTAGATCACGAGCGGAA 59.866 52.381 0.00 0.00 37.34 4.30
2728 3690 2.455032 CTTGTAGATCACGAGCGGAAG 58.545 52.381 0.00 0.00 31.77 3.46
2743 3705 1.787155 CGGAAGCGATCAATAGAACGG 59.213 52.381 0.00 0.00 40.01 4.44
2744 3706 2.135933 GGAAGCGATCAATAGAACGGG 58.864 52.381 0.00 0.00 40.01 5.28
2745 3707 2.135933 GAAGCGATCAATAGAACGGGG 58.864 52.381 0.00 0.00 40.01 5.73
2746 3708 1.120530 AGCGATCAATAGAACGGGGT 58.879 50.000 0.00 0.00 40.01 4.95
2747 3709 1.485066 AGCGATCAATAGAACGGGGTT 59.515 47.619 0.00 0.00 40.01 4.11
2748 3710 1.597663 GCGATCAATAGAACGGGGTTG 59.402 52.381 0.00 0.00 40.01 3.77
2749 3711 2.740580 GCGATCAATAGAACGGGGTTGA 60.741 50.000 0.00 0.00 40.01 3.18
2750 3712 3.123804 CGATCAATAGAACGGGGTTGAG 58.876 50.000 0.00 0.00 36.53 3.02
2751 3713 3.467803 GATCAATAGAACGGGGTTGAGG 58.532 50.000 0.00 0.00 34.45 3.86
2752 3714 1.557832 TCAATAGAACGGGGTTGAGGG 59.442 52.381 0.00 0.00 0.00 4.30
2753 3715 1.557832 CAATAGAACGGGGTTGAGGGA 59.442 52.381 0.00 0.00 0.00 4.20
2754 3716 1.497161 ATAGAACGGGGTTGAGGGAG 58.503 55.000 0.00 0.00 0.00 4.30
2755 3717 0.115745 TAGAACGGGGTTGAGGGAGT 59.884 55.000 0.00 0.00 0.00 3.85
2756 3718 1.192803 AGAACGGGGTTGAGGGAGTC 61.193 60.000 0.00 0.00 0.00 3.36
2757 3719 2.502692 GAACGGGGTTGAGGGAGTCG 62.503 65.000 0.00 0.00 0.00 4.18
2758 3720 2.995574 CGGGGTTGAGGGAGTCGT 60.996 66.667 0.00 0.00 0.00 4.34
2759 3721 1.679977 CGGGGTTGAGGGAGTCGTA 60.680 63.158 0.00 0.00 0.00 3.43
2760 3722 1.895966 GGGGTTGAGGGAGTCGTAC 59.104 63.158 0.00 0.00 0.00 3.67
2761 3723 0.614134 GGGGTTGAGGGAGTCGTACT 60.614 60.000 0.00 0.00 0.00 2.73
2762 3724 0.816373 GGGTTGAGGGAGTCGTACTC 59.184 60.000 6.50 6.50 44.32 2.59
2763 3725 0.450983 GGTTGAGGGAGTCGTACTCG 59.549 60.000 8.33 0.00 45.96 4.18
2764 3726 1.163554 GTTGAGGGAGTCGTACTCGT 58.836 55.000 8.33 0.60 45.96 4.18
2765 3727 1.130186 GTTGAGGGAGTCGTACTCGTC 59.870 57.143 8.33 8.18 45.96 4.20
2766 3728 0.738762 TGAGGGAGTCGTACTCGTCG 60.739 60.000 8.33 0.00 45.96 5.12
2767 3729 0.739112 GAGGGAGTCGTACTCGTCGT 60.739 60.000 8.33 0.09 45.96 4.34
2768 3730 1.018226 AGGGAGTCGTACTCGTCGTG 61.018 60.000 8.33 0.00 45.96 4.35
2769 3731 1.016130 GGGAGTCGTACTCGTCGTGA 61.016 60.000 0.56 0.00 45.96 4.35
2770 3732 1.005340 GGAGTCGTACTCGTCGTGAT 58.995 55.000 0.56 0.00 45.96 3.06
2771 3733 1.005137 GGAGTCGTACTCGTCGTGATC 60.005 57.143 0.56 0.00 45.96 2.92
2772 3734 1.005137 GAGTCGTACTCGTCGTGATCC 60.005 57.143 0.56 0.00 35.28 3.36
2773 3735 0.723414 GTCGTACTCGTCGTGATCCA 59.277 55.000 0.56 0.00 38.33 3.41
2774 3736 1.129251 GTCGTACTCGTCGTGATCCAA 59.871 52.381 0.56 0.00 38.33 3.53
2775 3737 1.805943 TCGTACTCGTCGTGATCCAAA 59.194 47.619 0.56 0.00 38.33 3.28
2776 3738 2.421073 TCGTACTCGTCGTGATCCAAAT 59.579 45.455 0.56 0.00 38.33 2.32
2777 3739 2.782192 CGTACTCGTCGTGATCCAAATC 59.218 50.000 0.56 0.00 0.00 2.17
2778 3740 3.729762 CGTACTCGTCGTGATCCAAATCA 60.730 47.826 0.56 0.00 39.63 2.57
2779 3741 7.861595 TCGTACTCGTCGTGATCCAAATCAC 62.862 48.000 8.20 8.20 45.52 3.06
2788 3750 3.808728 TGATCCAAATCACCGAAGATCC 58.191 45.455 0.00 0.00 36.98 3.36
2789 3751 3.455910 TGATCCAAATCACCGAAGATCCT 59.544 43.478 0.00 0.00 36.98 3.24
2790 3752 4.653801 TGATCCAAATCACCGAAGATCCTA 59.346 41.667 0.00 0.00 36.98 2.94
2791 3753 4.672587 TCCAAATCACCGAAGATCCTAG 57.327 45.455 0.00 0.00 0.00 3.02
2792 3754 4.030913 TCCAAATCACCGAAGATCCTAGT 58.969 43.478 0.00 0.00 0.00 2.57
2793 3755 4.122776 CCAAATCACCGAAGATCCTAGTG 58.877 47.826 0.00 0.00 0.00 2.74
2794 3756 3.460857 AATCACCGAAGATCCTAGTGC 57.539 47.619 0.00 0.00 0.00 4.40
2795 3757 1.112113 TCACCGAAGATCCTAGTGCC 58.888 55.000 0.00 0.00 0.00 5.01
2796 3758 0.249073 CACCGAAGATCCTAGTGCCG 60.249 60.000 0.00 0.00 0.00 5.69
2797 3759 0.395311 ACCGAAGATCCTAGTGCCGA 60.395 55.000 0.00 0.00 0.00 5.54
2798 3760 0.744874 CCGAAGATCCTAGTGCCGAA 59.255 55.000 0.00 0.00 0.00 4.30
2799 3761 1.536284 CCGAAGATCCTAGTGCCGAAC 60.536 57.143 0.00 0.00 0.00 3.95
2800 3762 1.841450 GAAGATCCTAGTGCCGAACG 58.159 55.000 0.00 0.00 0.00 3.95
2801 3763 0.460311 AAGATCCTAGTGCCGAACGG 59.540 55.000 9.00 9.00 38.57 4.44
2802 3764 0.395311 AGATCCTAGTGCCGAACGGA 60.395 55.000 17.63 0.00 37.50 4.69
2803 3765 0.248949 GATCCTAGTGCCGAACGGAC 60.249 60.000 17.63 11.59 37.50 4.79
2804 3766 2.001361 ATCCTAGTGCCGAACGGACG 62.001 60.000 17.63 0.00 37.50 4.79
2805 3767 2.693762 CCTAGTGCCGAACGGACGA 61.694 63.158 17.63 7.69 37.50 4.20
2806 3768 1.513586 CTAGTGCCGAACGGACGAC 60.514 63.158 17.63 9.44 37.50 4.34
2807 3769 2.191354 CTAGTGCCGAACGGACGACA 62.191 60.000 17.63 2.40 37.50 4.35
2808 3770 2.462255 TAGTGCCGAACGGACGACAC 62.462 60.000 17.63 14.09 44.36 3.67
2809 3771 4.651008 TGCCGAACGGACGACACC 62.651 66.667 17.63 0.00 37.50 4.16
2810 3772 4.353437 GCCGAACGGACGACACCT 62.353 66.667 17.63 0.00 37.50 4.00
2811 3773 2.126580 CCGAACGGACGACACCTC 60.127 66.667 7.53 0.00 37.50 3.85
2812 3774 2.126580 CGAACGGACGACACCTCC 60.127 66.667 0.00 0.00 35.09 4.30
2817 3779 4.353437 GGACGACACCTCCGCGTT 62.353 66.667 4.92 0.00 38.51 4.84
2818 3780 2.804090 GACGACACCTCCGCGTTC 60.804 66.667 4.92 0.00 38.51 3.95
2819 3781 3.547249 GACGACACCTCCGCGTTCA 62.547 63.158 4.92 0.00 38.51 3.18
2820 3782 2.355363 CGACACCTCCGCGTTCAA 60.355 61.111 4.92 0.00 0.00 2.69
2821 3783 2.654912 CGACACCTCCGCGTTCAAC 61.655 63.158 4.92 0.00 0.00 3.18
2822 3784 1.593209 GACACCTCCGCGTTCAACA 60.593 57.895 4.92 0.00 0.00 3.33
2823 3785 1.828331 GACACCTCCGCGTTCAACAC 61.828 60.000 4.92 0.00 0.00 3.32
2824 3786 1.885388 CACCTCCGCGTTCAACACA 60.885 57.895 4.92 0.00 0.00 3.72
2825 3787 1.885850 ACCTCCGCGTTCAACACAC 60.886 57.895 4.92 0.00 0.00 3.82
2826 3788 2.544359 CTCCGCGTTCAACACACG 59.456 61.111 4.92 0.00 40.75 4.49
2827 3789 2.202770 TCCGCGTTCAACACACGT 60.203 55.556 4.92 0.00 39.92 4.49
2828 3790 0.935831 CTCCGCGTTCAACACACGTA 60.936 55.000 4.92 0.00 39.92 3.57
2829 3791 1.199859 CCGCGTTCAACACACGTAC 59.800 57.895 4.92 0.00 39.92 3.67
2830 3792 1.155158 CGCGTTCAACACACGTACG 60.155 57.895 15.01 15.01 39.92 3.67
2831 3793 1.199859 GCGTTCAACACACGTACGG 59.800 57.895 21.06 11.05 39.92 4.02
2832 3794 1.481819 GCGTTCAACACACGTACGGT 61.482 55.000 21.06 11.73 39.92 4.83
2833 3795 0.922717 CGTTCAACACACGTACGGTT 59.077 50.000 21.06 11.24 32.80 4.44
2834 3796 1.331334 CGTTCAACACACGTACGGTTG 60.331 52.381 22.19 22.19 42.39 3.77
2835 3797 1.004715 GTTCAACACACGTACGGTTGG 60.005 52.381 25.39 13.85 41.59 3.77
2836 3798 0.530211 TCAACACACGTACGGTTGGG 60.530 55.000 25.39 17.76 41.59 4.12
2837 3799 1.227615 AACACACGTACGGTTGGGG 60.228 57.895 21.06 9.56 0.00 4.96
2838 3800 1.684386 AACACACGTACGGTTGGGGA 61.684 55.000 21.06 0.00 0.00 4.81
2839 3801 1.069427 CACACGTACGGTTGGGGAA 59.931 57.895 21.06 0.00 0.00 3.97
2840 3802 0.947180 CACACGTACGGTTGGGGAAG 60.947 60.000 21.06 0.37 0.00 3.46
2841 3803 1.114722 ACACGTACGGTTGGGGAAGA 61.115 55.000 21.06 0.00 0.00 2.87
2842 3804 0.668401 CACGTACGGTTGGGGAAGAC 60.668 60.000 21.06 0.00 0.00 3.01
2843 3805 1.444895 CGTACGGTTGGGGAAGACG 60.445 63.158 7.57 0.00 0.00 4.18
2844 3806 1.667722 GTACGGTTGGGGAAGACGT 59.332 57.895 0.00 0.00 41.10 4.34
2845 3807 0.389037 GTACGGTTGGGGAAGACGTC 60.389 60.000 7.70 7.70 38.79 4.34
2846 3808 0.540365 TACGGTTGGGGAAGACGTCT 60.540 55.000 13.58 13.58 38.79 4.18
2847 3809 1.080025 CGGTTGGGGAAGACGTCTC 60.080 63.158 20.33 12.14 0.00 3.36
2851 3813 3.618652 GGGGAAGACGTCTCCTCC 58.381 66.667 22.91 22.91 44.68 4.30
2852 3814 1.000612 GGGGAAGACGTCTCCTCCT 59.999 63.158 27.43 10.85 44.68 3.69
2853 3815 0.615261 GGGGAAGACGTCTCCTCCTT 60.615 60.000 27.43 10.16 44.68 3.36
2854 3816 0.818938 GGGAAGACGTCTCCTCCTTC 59.181 60.000 27.43 17.21 35.52 3.46
2855 3817 1.617533 GGGAAGACGTCTCCTCCTTCT 60.618 57.143 27.43 8.78 36.28 2.85
2856 3818 2.172679 GGAAGACGTCTCCTCCTTCTT 58.827 52.381 23.46 4.82 36.28 2.52
2857 3819 2.094442 GGAAGACGTCTCCTCCTTCTTG 60.094 54.545 23.46 0.00 36.28 3.02
2858 3820 2.588464 AGACGTCTCCTCCTTCTTGA 57.412 50.000 13.58 0.00 0.00 3.02
2859 3821 3.094484 AGACGTCTCCTCCTTCTTGAT 57.906 47.619 13.58 0.00 0.00 2.57
2860 3822 3.020984 AGACGTCTCCTCCTTCTTGATC 58.979 50.000 13.58 0.00 0.00 2.92
2861 3823 2.100087 GACGTCTCCTCCTTCTTGATCC 59.900 54.545 8.70 0.00 0.00 3.36
2862 3824 2.103373 CGTCTCCTCCTTCTTGATCCA 58.897 52.381 0.00 0.00 0.00 3.41
2863 3825 2.100584 CGTCTCCTCCTTCTTGATCCAG 59.899 54.545 0.00 0.00 0.00 3.86
2864 3826 2.114616 TCTCCTCCTTCTTGATCCAGC 58.885 52.381 0.00 0.00 0.00 4.85
2865 3827 1.836166 CTCCTCCTTCTTGATCCAGCA 59.164 52.381 0.00 0.00 0.00 4.41
2866 3828 2.238144 CTCCTCCTTCTTGATCCAGCAA 59.762 50.000 0.00 0.00 0.00 3.91
2867 3829 2.848694 TCCTCCTTCTTGATCCAGCAAT 59.151 45.455 0.00 0.00 0.00 3.56
2868 3830 2.950309 CCTCCTTCTTGATCCAGCAATG 59.050 50.000 0.00 0.00 0.00 2.82
2869 3831 2.950309 CTCCTTCTTGATCCAGCAATGG 59.050 50.000 0.00 0.00 0.00 3.16
2870 3832 2.029623 CCTTCTTGATCCAGCAATGGG 58.970 52.381 0.00 0.00 0.00 4.00
2871 3833 2.357465 CCTTCTTGATCCAGCAATGGGA 60.357 50.000 0.00 0.00 39.14 4.37
2872 3834 3.359033 CTTCTTGATCCAGCAATGGGAA 58.641 45.455 0.00 0.00 38.09 3.97
2873 3835 3.008835 TCTTGATCCAGCAATGGGAAG 57.991 47.619 0.00 0.00 38.09 3.46
2874 3836 2.029623 CTTGATCCAGCAATGGGAAGG 58.970 52.381 0.00 0.00 38.09 3.46
2875 3837 1.297968 TGATCCAGCAATGGGAAGGA 58.702 50.000 0.00 0.00 38.09 3.36
2876 3838 1.213678 TGATCCAGCAATGGGAAGGAG 59.786 52.381 0.00 0.00 38.09 3.69
2877 3839 1.492176 GATCCAGCAATGGGAAGGAGA 59.508 52.381 0.00 0.00 38.09 3.71
2878 3840 0.914644 TCCAGCAATGGGAAGGAGAG 59.085 55.000 0.00 0.00 0.00 3.20
2879 3841 0.106819 CCAGCAATGGGAAGGAGAGG 60.107 60.000 0.00 0.00 0.00 3.69
2880 3842 0.622665 CAGCAATGGGAAGGAGAGGT 59.377 55.000 0.00 0.00 0.00 3.85
2881 3843 1.005215 CAGCAATGGGAAGGAGAGGTT 59.995 52.381 0.00 0.00 0.00 3.50
2882 3844 1.005215 AGCAATGGGAAGGAGAGGTTG 59.995 52.381 0.00 0.00 0.00 3.77
2883 3845 1.004745 GCAATGGGAAGGAGAGGTTGA 59.995 52.381 0.00 0.00 0.00 3.18
2884 3846 2.716217 CAATGGGAAGGAGAGGTTGAC 58.284 52.381 0.00 0.00 0.00 3.18
2885 3847 0.905357 ATGGGAAGGAGAGGTTGACG 59.095 55.000 0.00 0.00 0.00 4.35
2886 3848 1.192146 TGGGAAGGAGAGGTTGACGG 61.192 60.000 0.00 0.00 0.00 4.79
2887 3849 0.903454 GGGAAGGAGAGGTTGACGGA 60.903 60.000 0.00 0.00 0.00 4.69
2888 3850 0.533032 GGAAGGAGAGGTTGACGGAG 59.467 60.000 0.00 0.00 0.00 4.63
2889 3851 1.546961 GAAGGAGAGGTTGACGGAGA 58.453 55.000 0.00 0.00 0.00 3.71
2890 3852 2.104170 GAAGGAGAGGTTGACGGAGAT 58.896 52.381 0.00 0.00 0.00 2.75
2891 3853 1.770294 AGGAGAGGTTGACGGAGATC 58.230 55.000 0.00 0.00 0.00 2.75
2892 3854 0.747852 GGAGAGGTTGACGGAGATCC 59.252 60.000 0.00 0.00 0.00 3.36
2893 3855 1.475403 GAGAGGTTGACGGAGATCCA 58.525 55.000 0.00 0.00 35.14 3.41
2894 3856 1.407258 GAGAGGTTGACGGAGATCCAG 59.593 57.143 0.00 0.00 35.14 3.86
2895 3857 0.179097 GAGGTTGACGGAGATCCAGC 60.179 60.000 0.00 0.00 35.14 4.85
2896 3858 0.904865 AGGTTGACGGAGATCCAGCA 60.905 55.000 0.00 0.00 35.14 4.41
2897 3859 0.460987 GGTTGACGGAGATCCAGCAG 60.461 60.000 0.00 0.00 35.14 4.24
2898 3860 1.086634 GTTGACGGAGATCCAGCAGC 61.087 60.000 0.00 0.00 35.14 5.25
2899 3861 1.543944 TTGACGGAGATCCAGCAGCA 61.544 55.000 0.00 0.00 35.14 4.41
2900 3862 1.520342 GACGGAGATCCAGCAGCAC 60.520 63.158 0.00 0.00 35.14 4.40
2901 3863 2.230994 GACGGAGATCCAGCAGCACA 62.231 60.000 0.00 0.00 35.14 4.57
2902 3864 1.078918 CGGAGATCCAGCAGCACAA 60.079 57.895 0.00 0.00 35.14 3.33
2903 3865 1.364626 CGGAGATCCAGCAGCACAAC 61.365 60.000 0.00 0.00 35.14 3.32
2904 3866 1.364626 GGAGATCCAGCAGCACAACG 61.365 60.000 0.00 0.00 35.64 4.10
2905 3867 1.364626 GAGATCCAGCAGCACAACGG 61.365 60.000 0.00 0.00 0.00 4.44
2906 3868 3.044059 GATCCAGCAGCACAACGGC 62.044 63.158 0.00 0.00 40.15 5.68
2909 3871 4.671549 CAGCAGCACAACGGCGTG 62.672 66.667 15.70 10.75 45.09 5.34
2915 3877 3.947841 CACAACGGCGTGGTGGTG 61.948 66.667 34.23 24.43 34.13 4.17
2917 3879 4.920112 CAACGGCGTGGTGGTGGA 62.920 66.667 15.70 0.00 0.00 4.02
2918 3880 4.178169 AACGGCGTGGTGGTGGAA 62.178 61.111 15.70 0.00 0.00 3.53
2919 3881 4.619227 ACGGCGTGGTGGTGGAAG 62.619 66.667 13.76 0.00 0.00 3.46
2920 3882 4.619227 CGGCGTGGTGGTGGAAGT 62.619 66.667 0.00 0.00 0.00 3.01
2921 3883 2.745037 GGCGTGGTGGTGGAAGTA 59.255 61.111 0.00 0.00 0.00 2.24
2922 3884 1.375523 GGCGTGGTGGTGGAAGTAG 60.376 63.158 0.00 0.00 0.00 2.57
2923 3885 2.033194 GCGTGGTGGTGGAAGTAGC 61.033 63.158 0.00 0.00 0.00 3.58
2924 3886 1.736645 CGTGGTGGTGGAAGTAGCG 60.737 63.158 0.00 0.00 0.00 4.26
2925 3887 1.375523 GTGGTGGTGGAAGTAGCGG 60.376 63.158 0.00 0.00 0.00 5.52
2926 3888 2.436115 GGTGGTGGAAGTAGCGGC 60.436 66.667 0.00 0.00 0.00 6.53
2927 3889 2.813908 GTGGTGGAAGTAGCGGCG 60.814 66.667 0.51 0.51 0.00 6.46
2928 3890 2.992689 TGGTGGAAGTAGCGGCGA 60.993 61.111 12.98 0.00 0.00 5.54
2929 3891 2.355986 TGGTGGAAGTAGCGGCGAT 61.356 57.895 12.98 7.15 0.00 4.58
2930 3892 1.591863 GGTGGAAGTAGCGGCGATC 60.592 63.158 12.98 0.00 0.00 3.69
2931 3893 1.437986 GTGGAAGTAGCGGCGATCT 59.562 57.895 12.98 0.56 0.00 2.75
2932 3894 0.595310 GTGGAAGTAGCGGCGATCTC 60.595 60.000 12.98 1.62 0.00 2.75
2933 3895 1.370657 GGAAGTAGCGGCGATCTCG 60.371 63.158 12.98 0.00 43.27 4.04
2934 3896 1.370657 GAAGTAGCGGCGATCTCGG 60.371 63.158 12.98 0.00 40.23 4.63
2942 3904 4.537433 GCGATCTCGGCAGGGCTT 62.537 66.667 1.34 0.00 40.23 4.35
2943 3905 2.279784 CGATCTCGGCAGGGCTTC 60.280 66.667 0.00 0.00 35.37 3.86
2944 3906 2.279784 GATCTCGGCAGGGCTTCG 60.280 66.667 0.00 0.00 0.00 3.79
2945 3907 4.537433 ATCTCGGCAGGGCTTCGC 62.537 66.667 0.00 0.00 0.00 4.70
2961 3923 2.511145 GCCAAGCTCAGCGAGAGG 60.511 66.667 10.57 8.71 44.86 3.69
2962 3924 2.186384 CCAAGCTCAGCGAGAGGG 59.814 66.667 10.57 4.49 44.86 4.30
2963 3925 2.354401 CCAAGCTCAGCGAGAGGGA 61.354 63.158 10.57 0.00 44.86 4.20
2964 3926 1.141449 CAAGCTCAGCGAGAGGGAG 59.859 63.158 10.57 0.00 44.86 4.30
2965 3927 1.000270 AAGCTCAGCGAGAGGGAGA 60.000 57.895 10.57 0.00 44.86 3.71
2966 3928 1.037030 AAGCTCAGCGAGAGGGAGAG 61.037 60.000 10.57 0.00 44.86 3.20
2967 3929 2.489275 GCTCAGCGAGAGGGAGAGG 61.489 68.421 10.57 0.00 44.86 3.69
2968 3930 1.077068 CTCAGCGAGAGGGAGAGGT 60.077 63.158 1.71 0.00 40.84 3.85
2969 3931 1.379176 TCAGCGAGAGGGAGAGGTG 60.379 63.158 0.00 0.00 0.00 4.00
2970 3932 2.043450 AGCGAGAGGGAGAGGTGG 60.043 66.667 0.00 0.00 0.00 4.61
2971 3933 2.363147 GCGAGAGGGAGAGGTGGT 60.363 66.667 0.00 0.00 0.00 4.16
2972 3934 1.076923 GCGAGAGGGAGAGGTGGTA 60.077 63.158 0.00 0.00 0.00 3.25
2973 3935 1.385756 GCGAGAGGGAGAGGTGGTAC 61.386 65.000 0.00 0.00 0.00 3.34
2974 3936 1.096386 CGAGAGGGAGAGGTGGTACG 61.096 65.000 0.00 0.00 0.00 3.67
2975 3937 0.752376 GAGAGGGAGAGGTGGTACGG 60.752 65.000 0.00 0.00 0.00 4.02
2976 3938 1.757340 GAGGGAGAGGTGGTACGGG 60.757 68.421 0.00 0.00 0.00 5.28
2977 3939 2.762875 GGGAGAGGTGGTACGGGG 60.763 72.222 0.00 0.00 0.00 5.73
2978 3940 2.762875 GGAGAGGTGGTACGGGGG 60.763 72.222 0.00 0.00 0.00 5.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
123 124 4.634443 AGTACACAAACGAAAAAGCAGAGT 59.366 37.500 0.00 0.00 0.00 3.24
229 230 5.968167 AGTGTCCTATACCTTTGGTTATGGA 59.032 40.000 0.00 0.00 37.09 3.41
292 293 6.564328 GCATAAAGCACTGCCTTAAAATACT 58.436 36.000 0.00 0.00 44.79 2.12
341 342 1.342672 GGTTGGAGGGAGGCCGAATA 61.343 60.000 0.00 0.00 0.00 1.75
589 591 0.665298 GAGCCCAAGAATGATTCGCC 59.335 55.000 0.00 0.00 34.02 5.54
590 592 1.382522 TGAGCCCAAGAATGATTCGC 58.617 50.000 0.00 0.00 34.02 4.70
591 593 4.418392 CTTTTGAGCCCAAGAATGATTCG 58.582 43.478 0.00 0.00 33.23 3.34
642 1203 4.778213 ATGTTTGCTAGCCCTCTATTCA 57.222 40.909 13.29 0.99 0.00 2.57
666 1227 6.671190 ACAACAACAAGACACATGATACATG 58.329 36.000 0.00 9.72 0.00 3.21
767 1446 7.069085 AGCACATAAAAATGATATTCCAGCACT 59.931 33.333 0.00 0.00 0.00 4.40
800 1499 9.812347 AAATGATATTCCAGCACCTAAATATGA 57.188 29.630 0.00 0.00 0.00 2.15
805 1504 8.912988 CCTAAAAATGATATTCCAGCACCTAAA 58.087 33.333 0.00 0.00 0.00 1.85
806 1505 8.058847 ACCTAAAAATGATATTCCAGCACCTAA 58.941 33.333 0.00 0.00 0.00 2.69
807 1506 7.502226 CACCTAAAAATGATATTCCAGCACCTA 59.498 37.037 0.00 0.00 0.00 3.08
808 1507 6.322201 CACCTAAAAATGATATTCCAGCACCT 59.678 38.462 0.00 0.00 0.00 4.00
809 1508 6.507023 CACCTAAAAATGATATTCCAGCACC 58.493 40.000 0.00 0.00 0.00 5.01
810 1509 5.979517 GCACCTAAAAATGATATTCCAGCAC 59.020 40.000 0.00 0.00 0.00 4.40
811 1510 5.893255 AGCACCTAAAAATGATATTCCAGCA 59.107 36.000 0.00 0.00 0.00 4.41
812 1511 6.211515 CAGCACCTAAAAATGATATTCCAGC 58.788 40.000 0.00 0.00 0.00 4.85
813 1512 6.547141 TCCAGCACCTAAAAATGATATTCCAG 59.453 38.462 0.00 0.00 0.00 3.86
814 1513 6.430864 TCCAGCACCTAAAAATGATATTCCA 58.569 36.000 0.00 0.00 0.00 3.53
815 1514 6.959639 TCCAGCACCTAAAAATGATATTCC 57.040 37.500 0.00 0.00 0.00 3.01
816 1515 8.416329 ACATTCCAGCACCTAAAAATGATATTC 58.584 33.333 0.00 0.00 0.00 1.75
817 1516 8.199449 CACATTCCAGCACCTAAAAATGATATT 58.801 33.333 0.00 0.00 0.00 1.28
818 1517 7.342799 ACACATTCCAGCACCTAAAAATGATAT 59.657 33.333 0.00 0.00 0.00 1.63
819 1518 6.663093 ACACATTCCAGCACCTAAAAATGATA 59.337 34.615 0.00 0.00 0.00 2.15
820 1519 5.481473 ACACATTCCAGCACCTAAAAATGAT 59.519 36.000 0.00 0.00 0.00 2.45
876 1680 7.026562 CGCAACACATAAAAGTGATATTCCAA 58.973 34.615 0.57 0.00 42.05 3.53
887 1691 7.795431 AATAACACATCGCAACACATAAAAG 57.205 32.000 0.00 0.00 0.00 2.27
999 1825 3.117888 ACATAGGCCGAGTCCAATTCATT 60.118 43.478 0.00 0.00 0.00 2.57
1071 1897 5.003804 GCCTCTTTGAATCCTTTGTCAGTA 58.996 41.667 0.00 0.00 0.00 2.74
1144 1970 6.591448 TGATTGTGCACTTGAGTAATAGACAG 59.409 38.462 19.41 0.00 0.00 3.51
1299 2125 6.650390 ACAAAAAGGGTTGATAAATGTGCATC 59.350 34.615 0.00 0.00 32.59 3.91
1325 2151 7.329962 CAGCAATAAGACAATTCATTTCAGCAA 59.670 33.333 0.00 0.00 0.00 3.91
1373 2199 5.540911 ACAAAGACATCATTTCCGCAAAAT 58.459 33.333 0.00 0.00 38.11 1.82
1649 2580 4.022242 TGAGTGACACTAGTAGTTGGAAGC 60.022 45.833 8.41 0.00 0.00 3.86
1666 2597 0.191064 AGGTGAAGGGTCCTGAGTGA 59.809 55.000 0.00 0.00 32.29 3.41
1709 2640 1.980765 TCCTCAGTCAAACCTGATGCT 59.019 47.619 0.00 0.00 40.53 3.79
1994 2926 1.525619 GACAAGCACCGACTAACACAC 59.474 52.381 0.00 0.00 0.00 3.82
1995 2927 1.860676 GACAAGCACCGACTAACACA 58.139 50.000 0.00 0.00 0.00 3.72
2134 3069 3.064958 CCTGAATTGTAGCAGTGCATCAG 59.935 47.826 19.20 17.76 34.33 2.90
2261 3199 6.463995 ACGGATATTTTGCCATATGTTTGT 57.536 33.333 1.24 0.00 0.00 2.83
2306 3266 3.264193 TGCTGAGATGGTGTTTGGTAGAT 59.736 43.478 0.00 0.00 0.00 1.98
2320 3282 2.570752 AGAAGACATGGTGTGCTGAGAT 59.429 45.455 0.00 0.00 0.00 2.75
2460 3422 2.787339 TTCCCACCCTAGCATAGCTA 57.213 50.000 0.00 0.00 40.44 3.32
2462 3424 2.355209 GCTATTCCCACCCTAGCATAGC 60.355 54.545 0.00 0.00 37.37 2.97
2508 3470 1.358877 TCTCATGGATTTGCGTGACG 58.641 50.000 0.00 0.00 0.00 4.35
2509 3471 2.476854 GCTTCTCATGGATTTGCGTGAC 60.477 50.000 0.00 0.00 0.00 3.67
2510 3472 1.739466 GCTTCTCATGGATTTGCGTGA 59.261 47.619 0.00 0.00 0.00 4.35
2511 3473 1.469703 TGCTTCTCATGGATTTGCGTG 59.530 47.619 0.00 0.00 0.00 5.34
2512 3474 1.825090 TGCTTCTCATGGATTTGCGT 58.175 45.000 0.00 0.00 0.00 5.24
2513 3475 2.727777 CATGCTTCTCATGGATTTGCG 58.272 47.619 0.00 0.00 46.81 4.85
2542 3504 0.673022 GCTTGTCTCTGCTGGGACTG 60.673 60.000 22.40 16.09 34.01 3.51
2543 3505 1.676384 GCTTGTCTCTGCTGGGACT 59.324 57.895 22.40 0.00 34.01 3.85
2544 3506 1.376553 GGCTTGTCTCTGCTGGGAC 60.377 63.158 16.20 16.20 0.00 4.46
2545 3507 2.947532 CGGCTTGTCTCTGCTGGGA 61.948 63.158 0.00 0.00 32.37 4.37
2546 3508 2.435586 CGGCTTGTCTCTGCTGGG 60.436 66.667 0.00 0.00 32.37 4.45
2547 3509 2.031516 CACGGCTTGTCTCTGCTGG 61.032 63.158 0.00 0.00 39.67 4.85
2548 3510 0.882042 AACACGGCTTGTCTCTGCTG 60.882 55.000 0.00 0.00 37.51 4.41
2549 3511 0.679505 TAACACGGCTTGTCTCTGCT 59.320 50.000 0.00 0.00 37.51 4.24
2550 3512 1.508632 TTAACACGGCTTGTCTCTGC 58.491 50.000 0.00 0.00 37.51 4.26
2551 3513 2.869801 TGTTTAACACGGCTTGTCTCTG 59.130 45.455 0.00 0.00 37.51 3.35
2552 3514 3.131396 CTGTTTAACACGGCTTGTCTCT 58.869 45.455 0.00 0.00 37.51 3.10
2553 3515 2.223377 CCTGTTTAACACGGCTTGTCTC 59.777 50.000 0.00 0.00 37.51 3.36
2554 3516 2.218603 CCTGTTTAACACGGCTTGTCT 58.781 47.619 0.00 0.00 37.51 3.41
2555 3517 1.334689 GCCTGTTTAACACGGCTTGTC 60.335 52.381 22.18 3.36 37.51 3.18
2556 3518 0.666374 GCCTGTTTAACACGGCTTGT 59.334 50.000 22.18 0.00 41.74 3.16
2557 3519 0.039527 GGCCTGTTTAACACGGCTTG 60.040 55.000 25.62 5.88 40.15 4.01
2558 3520 0.466555 TGGCCTGTTTAACACGGCTT 60.467 50.000 25.62 0.00 40.15 4.35
2559 3521 0.251165 ATGGCCTGTTTAACACGGCT 60.251 50.000 25.62 12.98 40.15 5.52
2560 3522 1.400494 CTATGGCCTGTTTAACACGGC 59.600 52.381 21.69 21.69 39.81 5.68
2561 3523 2.014128 CCTATGGCCTGTTTAACACGG 58.986 52.381 3.32 1.67 0.00 4.94
2562 3524 2.706890 ACCTATGGCCTGTTTAACACG 58.293 47.619 3.32 0.00 0.00 4.49
2563 3525 4.076394 TCAACCTATGGCCTGTTTAACAC 58.924 43.478 3.32 0.00 0.00 3.32
2564 3526 4.374689 TCAACCTATGGCCTGTTTAACA 57.625 40.909 3.32 0.00 0.00 2.41
2565 3527 4.947388 TCATCAACCTATGGCCTGTTTAAC 59.053 41.667 3.32 0.00 0.00 2.01
2566 3528 5.186256 TCATCAACCTATGGCCTGTTTAA 57.814 39.130 3.32 0.00 0.00 1.52
2567 3529 4.853468 TCATCAACCTATGGCCTGTTTA 57.147 40.909 3.32 0.00 0.00 2.01
2568 3530 3.737559 TCATCAACCTATGGCCTGTTT 57.262 42.857 3.32 0.00 0.00 2.83
2569 3531 3.202818 TGATCATCAACCTATGGCCTGTT 59.797 43.478 3.32 0.00 0.00 3.16
2570 3532 2.779430 TGATCATCAACCTATGGCCTGT 59.221 45.455 3.32 0.00 0.00 4.00
2571 3533 3.181447 ACTGATCATCAACCTATGGCCTG 60.181 47.826 3.32 0.00 0.00 4.85
2572 3534 3.051581 ACTGATCATCAACCTATGGCCT 58.948 45.455 3.32 0.00 0.00 5.19
2573 3535 3.406764 GACTGATCATCAACCTATGGCC 58.593 50.000 0.00 0.00 0.00 5.36
2574 3536 3.406764 GGACTGATCATCAACCTATGGC 58.593 50.000 0.00 0.00 0.00 4.40
2575 3537 3.392285 TGGGACTGATCATCAACCTATGG 59.608 47.826 0.00 0.00 0.00 2.74
2576 3538 4.346127 TCTGGGACTGATCATCAACCTATG 59.654 45.833 0.00 0.00 0.00 2.23
2577 3539 4.346418 GTCTGGGACTGATCATCAACCTAT 59.654 45.833 0.00 0.00 38.85 2.57
2578 3540 3.706594 GTCTGGGACTGATCATCAACCTA 59.293 47.826 0.00 4.17 38.85 3.08
2579 3541 2.503356 GTCTGGGACTGATCATCAACCT 59.497 50.000 0.00 0.00 38.85 3.50
2580 3542 2.739932 CGTCTGGGACTGATCATCAACC 60.740 54.545 0.00 2.77 38.85 3.77
2581 3543 2.166459 TCGTCTGGGACTGATCATCAAC 59.834 50.000 0.00 0.00 38.85 3.18
2582 3544 2.428530 CTCGTCTGGGACTGATCATCAA 59.571 50.000 0.00 0.00 38.85 2.57
2583 3545 2.027385 CTCGTCTGGGACTGATCATCA 58.973 52.381 0.00 0.00 38.85 3.07
2584 3546 2.028130 ACTCGTCTGGGACTGATCATC 58.972 52.381 0.00 0.00 38.85 2.92
2585 3547 2.028130 GACTCGTCTGGGACTGATCAT 58.972 52.381 0.00 0.00 38.85 2.45
2586 3548 1.464734 GACTCGTCTGGGACTGATCA 58.535 55.000 0.00 0.00 38.85 2.92
2587 3549 0.378962 CGACTCGTCTGGGACTGATC 59.621 60.000 0.00 0.00 38.85 2.92
2588 3550 0.322636 ACGACTCGTCTGGGACTGAT 60.323 55.000 0.00 0.00 38.85 2.90
2589 3551 1.072678 ACGACTCGTCTGGGACTGA 59.927 57.895 0.00 0.00 33.69 3.41
2590 3552 3.669686 ACGACTCGTCTGGGACTG 58.330 61.111 0.00 0.00 33.69 3.51
2599 3561 1.111116 TTCCCCAACAGACGACTCGT 61.111 55.000 3.08 3.08 45.10 4.18
2600 3562 0.666577 GTTCCCCAACAGACGACTCG 60.667 60.000 0.00 0.00 32.14 4.18
2601 3563 0.666577 CGTTCCCCAACAGACGACTC 60.667 60.000 0.00 0.00 37.69 3.36
2602 3564 1.366366 CGTTCCCCAACAGACGACT 59.634 57.895 0.00 0.00 37.69 4.18
2603 3565 0.531311 AACGTTCCCCAACAGACGAC 60.531 55.000 0.00 0.00 38.74 4.34
2604 3566 0.531090 CAACGTTCCCCAACAGACGA 60.531 55.000 0.00 0.00 38.74 4.20
2605 3567 1.938861 CAACGTTCCCCAACAGACG 59.061 57.895 0.00 0.00 41.00 4.18
2606 3568 1.098712 TGCAACGTTCCCCAACAGAC 61.099 55.000 0.00 0.00 32.14 3.51
2607 3569 0.817634 CTGCAACGTTCCCCAACAGA 60.818 55.000 0.00 0.00 32.14 3.41
2608 3570 0.817634 TCTGCAACGTTCCCCAACAG 60.818 55.000 0.00 0.00 32.14 3.16
2609 3571 0.394488 TTCTGCAACGTTCCCCAACA 60.394 50.000 0.00 0.00 32.14 3.33
2610 3572 0.741915 TTTCTGCAACGTTCCCCAAC 59.258 50.000 0.00 0.00 0.00 3.77
2611 3573 1.475403 TTTTCTGCAACGTTCCCCAA 58.525 45.000 0.00 0.00 0.00 4.12
2612 3574 1.698506 ATTTTCTGCAACGTTCCCCA 58.301 45.000 0.00 0.00 0.00 4.96
2613 3575 3.926821 TTATTTTCTGCAACGTTCCCC 57.073 42.857 0.00 0.00 0.00 4.81
2634 3596 6.206634 TGATCTTGGTGAAGCGTAGAATTTTT 59.793 34.615 0.00 0.00 0.00 1.94
2635 3597 5.705441 TGATCTTGGTGAAGCGTAGAATTTT 59.295 36.000 0.00 0.00 0.00 1.82
2636 3598 5.245531 TGATCTTGGTGAAGCGTAGAATTT 58.754 37.500 0.00 0.00 0.00 1.82
2637 3599 4.832248 TGATCTTGGTGAAGCGTAGAATT 58.168 39.130 0.00 0.00 0.00 2.17
2638 3600 4.471904 TGATCTTGGTGAAGCGTAGAAT 57.528 40.909 0.00 0.00 0.00 2.40
2639 3601 3.953712 TGATCTTGGTGAAGCGTAGAA 57.046 42.857 0.00 0.00 0.00 2.10
2640 3602 3.953712 TTGATCTTGGTGAAGCGTAGA 57.046 42.857 0.00 0.00 0.00 2.59
2641 3603 4.437239 AGATTGATCTTGGTGAAGCGTAG 58.563 43.478 0.00 0.00 31.97 3.51
2642 3604 4.471904 AGATTGATCTTGGTGAAGCGTA 57.528 40.909 0.00 0.00 31.97 4.42
2643 3605 3.340814 AGATTGATCTTGGTGAAGCGT 57.659 42.857 0.00 0.00 31.97 5.07
2644 3606 4.212847 CCATAGATTGATCTTGGTGAAGCG 59.787 45.833 0.00 0.00 38.32 4.68
2645 3607 5.371526 TCCATAGATTGATCTTGGTGAAGC 58.628 41.667 15.48 0.00 38.32 3.86
2646 3608 6.590068 ACTCCATAGATTGATCTTGGTGAAG 58.410 40.000 19.38 13.36 38.32 3.02
2647 3609 6.156775 TGACTCCATAGATTGATCTTGGTGAA 59.843 38.462 19.38 11.24 38.32 3.18
2648 3610 5.662657 TGACTCCATAGATTGATCTTGGTGA 59.337 40.000 19.38 6.63 38.32 4.02
2649 3611 5.922053 TGACTCCATAGATTGATCTTGGTG 58.078 41.667 15.48 15.28 38.32 4.17
2650 3612 6.100859 ACATGACTCCATAGATTGATCTTGGT 59.899 38.462 0.00 4.75 38.32 3.67
2651 3613 6.531923 ACATGACTCCATAGATTGATCTTGG 58.468 40.000 0.00 7.19 38.32 3.61
2652 3614 7.331440 GCTACATGACTCCATAGATTGATCTTG 59.669 40.741 0.00 0.00 38.32 3.02
2653 3615 7.015974 TGCTACATGACTCCATAGATTGATCTT 59.984 37.037 0.00 0.00 38.32 2.40
2654 3616 6.496218 TGCTACATGACTCCATAGATTGATCT 59.504 38.462 0.00 0.00 40.86 2.75
2655 3617 6.695429 TGCTACATGACTCCATAGATTGATC 58.305 40.000 0.00 0.00 0.00 2.92
2656 3618 6.676990 TGCTACATGACTCCATAGATTGAT 57.323 37.500 0.00 0.00 0.00 2.57
2657 3619 6.283694 GTTGCTACATGACTCCATAGATTGA 58.716 40.000 0.00 0.00 0.00 2.57
2658 3620 5.176406 CGTTGCTACATGACTCCATAGATTG 59.824 44.000 0.00 0.00 0.00 2.67
2659 3621 5.069119 TCGTTGCTACATGACTCCATAGATT 59.931 40.000 0.00 0.00 0.00 2.40
2660 3622 4.584743 TCGTTGCTACATGACTCCATAGAT 59.415 41.667 0.00 0.00 0.00 1.98
2661 3623 3.951680 TCGTTGCTACATGACTCCATAGA 59.048 43.478 0.00 0.00 0.00 1.98
2662 3624 4.036852 TCTCGTTGCTACATGACTCCATAG 59.963 45.833 0.00 0.00 0.00 2.23
2663 3625 3.951680 TCTCGTTGCTACATGACTCCATA 59.048 43.478 0.00 0.00 0.00 2.74
2664 3626 2.760650 TCTCGTTGCTACATGACTCCAT 59.239 45.455 0.00 0.00 0.00 3.41
2665 3627 2.164422 CTCTCGTTGCTACATGACTCCA 59.836 50.000 0.00 0.00 0.00 3.86
2666 3628 2.423892 TCTCTCGTTGCTACATGACTCC 59.576 50.000 0.00 0.00 0.00 3.85
2667 3629 3.375610 TCTCTCTCGTTGCTACATGACTC 59.624 47.826 0.00 0.00 0.00 3.36
2668 3630 3.348119 TCTCTCTCGTTGCTACATGACT 58.652 45.455 0.00 0.00 0.00 3.41
2669 3631 3.488384 CCTCTCTCTCGTTGCTACATGAC 60.488 52.174 0.00 0.00 0.00 3.06
2670 3632 2.685388 CCTCTCTCTCGTTGCTACATGA 59.315 50.000 0.00 0.00 0.00 3.07
2671 3633 2.685388 TCCTCTCTCTCGTTGCTACATG 59.315 50.000 0.00 0.00 0.00 3.21
2672 3634 2.948979 CTCCTCTCTCTCGTTGCTACAT 59.051 50.000 0.00 0.00 0.00 2.29
2673 3635 2.290387 ACTCCTCTCTCTCGTTGCTACA 60.290 50.000 0.00 0.00 0.00 2.74
2674 3636 2.096819 CACTCCTCTCTCTCGTTGCTAC 59.903 54.545 0.00 0.00 0.00 3.58
2675 3637 2.360844 CACTCCTCTCTCTCGTTGCTA 58.639 52.381 0.00 0.00 0.00 3.49
2676 3638 1.173043 CACTCCTCTCTCTCGTTGCT 58.827 55.000 0.00 0.00 0.00 3.91
2677 3639 0.457681 GCACTCCTCTCTCTCGTTGC 60.458 60.000 0.00 0.00 0.00 4.17
2678 3640 0.884514 TGCACTCCTCTCTCTCGTTG 59.115 55.000 0.00 0.00 0.00 4.10
2679 3641 1.748493 GATGCACTCCTCTCTCTCGTT 59.252 52.381 0.00 0.00 0.00 3.85
2680 3642 1.064758 AGATGCACTCCTCTCTCTCGT 60.065 52.381 0.00 0.00 0.00 4.18
2681 3643 1.679139 AGATGCACTCCTCTCTCTCG 58.321 55.000 0.00 0.00 0.00 4.04
2682 3644 3.550820 TGTAGATGCACTCCTCTCTCTC 58.449 50.000 0.00 0.00 0.00 3.20
2683 3645 3.660970 TGTAGATGCACTCCTCTCTCT 57.339 47.619 0.00 0.00 0.00 3.10
2684 3646 4.217550 GGTATGTAGATGCACTCCTCTCTC 59.782 50.000 0.00 0.00 0.00 3.20
2685 3647 4.148838 GGTATGTAGATGCACTCCTCTCT 58.851 47.826 0.00 0.00 0.00 3.10
2686 3648 3.257127 GGGTATGTAGATGCACTCCTCTC 59.743 52.174 0.00 0.00 0.00 3.20
2687 3649 3.116939 AGGGTATGTAGATGCACTCCTCT 60.117 47.826 0.00 0.00 0.00 3.69
2688 3650 3.235200 AGGGTATGTAGATGCACTCCTC 58.765 50.000 0.00 0.00 0.00 3.71
2689 3651 3.336509 AGGGTATGTAGATGCACTCCT 57.663 47.619 0.00 0.00 0.00 3.69
2690 3652 3.134804 ACAAGGGTATGTAGATGCACTCC 59.865 47.826 0.00 0.00 25.83 3.85
2691 3653 4.408182 ACAAGGGTATGTAGATGCACTC 57.592 45.455 0.00 0.00 25.83 3.51
2700 3662 4.277672 GCTCGTGATCTACAAGGGTATGTA 59.722 45.833 0.00 0.00 34.75 2.29
2701 3663 3.068307 GCTCGTGATCTACAAGGGTATGT 59.932 47.826 0.00 0.00 37.32 2.29
2702 3664 3.643763 GCTCGTGATCTACAAGGGTATG 58.356 50.000 0.00 0.00 31.32 2.39
2703 3665 2.293677 CGCTCGTGATCTACAAGGGTAT 59.706 50.000 0.00 0.00 31.32 2.73
2704 3666 1.674441 CGCTCGTGATCTACAAGGGTA 59.326 52.381 0.00 0.00 31.32 3.69
2705 3667 0.456221 CGCTCGTGATCTACAAGGGT 59.544 55.000 0.00 0.00 31.32 4.34
2706 3668 0.249073 CCGCTCGTGATCTACAAGGG 60.249 60.000 0.00 0.00 0.00 3.95
2707 3669 0.738975 TCCGCTCGTGATCTACAAGG 59.261 55.000 0.00 0.00 0.00 3.61
2708 3670 2.455032 CTTCCGCTCGTGATCTACAAG 58.545 52.381 0.00 0.00 0.00 3.16
2709 3671 1.469251 GCTTCCGCTCGTGATCTACAA 60.469 52.381 0.00 0.00 0.00 2.41
2710 3672 0.100682 GCTTCCGCTCGTGATCTACA 59.899 55.000 0.00 0.00 0.00 2.74
2711 3673 0.930742 CGCTTCCGCTCGTGATCTAC 60.931 60.000 0.00 0.00 0.00 2.59
2712 3674 1.093496 TCGCTTCCGCTCGTGATCTA 61.093 55.000 0.00 0.00 0.00 1.98
2713 3675 1.729470 ATCGCTTCCGCTCGTGATCT 61.729 55.000 0.00 0.00 0.00 2.75
2714 3676 1.272114 GATCGCTTCCGCTCGTGATC 61.272 60.000 0.00 0.00 39.20 2.92
2715 3677 1.299468 GATCGCTTCCGCTCGTGAT 60.299 57.895 0.00 0.00 33.42 3.06
2716 3678 2.102357 GATCGCTTCCGCTCGTGA 59.898 61.111 0.00 0.00 0.00 4.35
2717 3679 1.148157 ATTGATCGCTTCCGCTCGTG 61.148 55.000 0.00 0.00 32.59 4.35
2718 3680 0.384309 TATTGATCGCTTCCGCTCGT 59.616 50.000 0.00 0.00 32.59 4.18
2719 3681 1.056103 CTATTGATCGCTTCCGCTCG 58.944 55.000 0.00 0.00 32.59 5.03
2720 3682 2.423926 TCTATTGATCGCTTCCGCTC 57.576 50.000 0.00 0.00 0.00 5.03
2721 3683 2.474816 GTTCTATTGATCGCTTCCGCT 58.525 47.619 0.00 0.00 0.00 5.52
2722 3684 1.190323 CGTTCTATTGATCGCTTCCGC 59.810 52.381 0.00 0.00 0.00 5.54
2723 3685 1.787155 CCGTTCTATTGATCGCTTCCG 59.213 52.381 2.60 0.00 34.96 4.30
2724 3686 2.135933 CCCGTTCTATTGATCGCTTCC 58.864 52.381 2.60 0.00 34.96 3.46
2725 3687 2.135933 CCCCGTTCTATTGATCGCTTC 58.864 52.381 2.60 0.00 34.96 3.86
2726 3688 1.485066 ACCCCGTTCTATTGATCGCTT 59.515 47.619 2.60 0.00 34.96 4.68
2727 3689 1.120530 ACCCCGTTCTATTGATCGCT 58.879 50.000 2.60 0.00 34.96 4.93
2728 3690 1.597663 CAACCCCGTTCTATTGATCGC 59.402 52.381 2.60 0.00 34.96 4.58
2729 3691 3.123804 CTCAACCCCGTTCTATTGATCG 58.876 50.000 1.30 1.30 35.76 3.69
2730 3692 3.467803 CCTCAACCCCGTTCTATTGATC 58.532 50.000 0.00 0.00 31.00 2.92
2731 3693 2.172717 CCCTCAACCCCGTTCTATTGAT 59.827 50.000 0.00 0.00 31.00 2.57
2732 3694 1.557832 CCCTCAACCCCGTTCTATTGA 59.442 52.381 0.00 0.00 0.00 2.57
2733 3695 1.557832 TCCCTCAACCCCGTTCTATTG 59.442 52.381 0.00 0.00 0.00 1.90
2734 3696 1.838077 CTCCCTCAACCCCGTTCTATT 59.162 52.381 0.00 0.00 0.00 1.73
2735 3697 1.273666 ACTCCCTCAACCCCGTTCTAT 60.274 52.381 0.00 0.00 0.00 1.98
2736 3698 0.115745 ACTCCCTCAACCCCGTTCTA 59.884 55.000 0.00 0.00 0.00 2.10
2737 3699 1.152096 ACTCCCTCAACCCCGTTCT 60.152 57.895 0.00 0.00 0.00 3.01
2738 3700 1.295746 GACTCCCTCAACCCCGTTC 59.704 63.158 0.00 0.00 0.00 3.95
2739 3701 2.580601 CGACTCCCTCAACCCCGTT 61.581 63.158 0.00 0.00 0.00 4.44
2740 3702 2.430704 TACGACTCCCTCAACCCCGT 62.431 60.000 0.00 0.00 0.00 5.28
2741 3703 1.679977 TACGACTCCCTCAACCCCG 60.680 63.158 0.00 0.00 0.00 5.73
2742 3704 0.614134 AGTACGACTCCCTCAACCCC 60.614 60.000 0.00 0.00 0.00 4.95
2743 3705 0.816373 GAGTACGACTCCCTCAACCC 59.184 60.000 0.00 0.00 39.28 4.11
2744 3706 0.450983 CGAGTACGACTCCCTCAACC 59.549 60.000 8.73 0.00 42.12 3.77
2745 3707 1.130186 GACGAGTACGACTCCCTCAAC 59.870 57.143 8.73 0.00 42.12 3.18
2746 3708 1.446907 GACGAGTACGACTCCCTCAA 58.553 55.000 8.73 0.00 42.12 3.02
2747 3709 0.738762 CGACGAGTACGACTCCCTCA 60.739 60.000 8.73 0.00 42.12 3.86
2748 3710 0.739112 ACGACGAGTACGACTCCCTC 60.739 60.000 0.00 4.40 42.12 4.30
2749 3711 1.018226 CACGACGAGTACGACTCCCT 61.018 60.000 0.00 0.00 42.12 4.20
2750 3712 1.016130 TCACGACGAGTACGACTCCC 61.016 60.000 0.00 2.50 42.12 4.30
2751 3713 1.005137 GATCACGACGAGTACGACTCC 60.005 57.143 0.00 0.00 42.12 3.85
2752 3714 1.005137 GGATCACGACGAGTACGACTC 60.005 57.143 0.00 0.00 41.71 3.36
2753 3715 1.005340 GGATCACGACGAGTACGACT 58.995 55.000 0.00 0.00 42.66 4.18
2754 3716 0.723414 TGGATCACGACGAGTACGAC 59.277 55.000 0.00 0.00 42.66 4.34
2755 3717 1.441738 TTGGATCACGACGAGTACGA 58.558 50.000 0.00 0.00 42.66 3.43
2756 3718 2.251869 TTTGGATCACGACGAGTACG 57.748 50.000 0.00 0.00 45.75 3.67
2757 3719 3.766151 TGATTTGGATCACGACGAGTAC 58.234 45.455 0.00 0.00 37.37 2.73
2767 3729 3.455910 AGGATCTTCGGTGATTTGGATCA 59.544 43.478 0.00 0.00 39.92 2.92
2768 3730 4.078639 AGGATCTTCGGTGATTTGGATC 57.921 45.455 0.00 0.00 0.00 3.36
2769 3731 4.656112 ACTAGGATCTTCGGTGATTTGGAT 59.344 41.667 0.00 0.00 0.00 3.41
2770 3732 4.030913 ACTAGGATCTTCGGTGATTTGGA 58.969 43.478 0.00 0.00 0.00 3.53
2771 3733 4.122776 CACTAGGATCTTCGGTGATTTGG 58.877 47.826 0.00 0.00 0.00 3.28
2772 3734 3.557595 GCACTAGGATCTTCGGTGATTTG 59.442 47.826 12.71 0.00 0.00 2.32
2773 3735 3.432326 GGCACTAGGATCTTCGGTGATTT 60.432 47.826 12.71 0.00 0.00 2.17
2774 3736 2.103263 GGCACTAGGATCTTCGGTGATT 59.897 50.000 12.71 0.00 0.00 2.57
2775 3737 1.689273 GGCACTAGGATCTTCGGTGAT 59.311 52.381 12.71 0.00 0.00 3.06
2776 3738 1.112113 GGCACTAGGATCTTCGGTGA 58.888 55.000 12.71 0.00 0.00 4.02
2777 3739 0.249073 CGGCACTAGGATCTTCGGTG 60.249 60.000 0.00 6.53 0.00 4.94
2778 3740 0.395311 TCGGCACTAGGATCTTCGGT 60.395 55.000 0.00 0.00 0.00 4.69
2779 3741 0.744874 TTCGGCACTAGGATCTTCGG 59.255 55.000 0.00 0.00 0.00 4.30
2780 3742 1.841450 GTTCGGCACTAGGATCTTCG 58.159 55.000 0.00 0.00 0.00 3.79
2781 3743 1.536284 CCGTTCGGCACTAGGATCTTC 60.536 57.143 0.00 0.00 0.00 2.87
2782 3744 0.460311 CCGTTCGGCACTAGGATCTT 59.540 55.000 0.00 0.00 0.00 2.40
2783 3745 0.395311 TCCGTTCGGCACTAGGATCT 60.395 55.000 6.35 0.00 0.00 2.75
2784 3746 0.248949 GTCCGTTCGGCACTAGGATC 60.249 60.000 6.35 0.00 33.15 3.36
2785 3747 1.814527 GTCCGTTCGGCACTAGGAT 59.185 57.895 6.35 0.00 33.15 3.24
2786 3748 2.693762 CGTCCGTTCGGCACTAGGA 61.694 63.158 6.35 0.00 0.00 2.94
2787 3749 2.202570 CGTCCGTTCGGCACTAGG 60.203 66.667 6.35 0.00 0.00 3.02
2788 3750 1.513586 GTCGTCCGTTCGGCACTAG 60.514 63.158 6.35 0.00 35.41 2.57
2789 3751 2.260154 TGTCGTCCGTTCGGCACTA 61.260 57.895 6.35 0.00 40.48 2.74
2790 3752 3.598715 TGTCGTCCGTTCGGCACT 61.599 61.111 6.35 0.00 40.48 4.40
2792 3754 4.651008 GGTGTCGTCCGTTCGGCA 62.651 66.667 6.35 0.00 43.08 5.69
2793 3755 4.353437 AGGTGTCGTCCGTTCGGC 62.353 66.667 6.35 1.44 35.91 5.54
2794 3756 2.126580 GAGGTGTCGTCCGTTCGG 60.127 66.667 4.74 4.74 0.00 4.30
2795 3757 2.126580 GGAGGTGTCGTCCGTTCG 60.127 66.667 0.00 0.00 0.00 3.95
2800 3762 4.353437 AACGCGGAGGTGTCGTCC 62.353 66.667 12.47 0.00 35.39 4.79
2801 3763 2.804090 GAACGCGGAGGTGTCGTC 60.804 66.667 12.47 0.00 35.39 4.20
2802 3764 3.141522 TTGAACGCGGAGGTGTCGT 62.142 57.895 12.47 0.00 35.39 4.34
2803 3765 2.355363 TTGAACGCGGAGGTGTCG 60.355 61.111 12.47 0.00 35.39 4.35
2804 3766 1.593209 TGTTGAACGCGGAGGTGTC 60.593 57.895 12.47 0.00 35.39 3.67
2805 3767 1.885850 GTGTTGAACGCGGAGGTGT 60.886 57.895 12.47 0.00 38.89 4.16
2806 3768 1.885388 TGTGTTGAACGCGGAGGTG 60.885 57.895 12.47 0.00 0.00 4.00
2807 3769 1.885850 GTGTGTTGAACGCGGAGGT 60.886 57.895 12.47 0.00 0.00 3.85
2808 3770 2.935955 GTGTGTTGAACGCGGAGG 59.064 61.111 12.47 0.00 0.00 4.30
2813 3775 1.199859 CCGTACGTGTGTTGAACGC 59.800 57.895 15.21 1.20 44.80 4.84
2814 3776 0.922717 AACCGTACGTGTGTTGAACG 59.077 50.000 15.21 0.00 46.32 3.95
2815 3777 1.004715 CCAACCGTACGTGTGTTGAAC 60.005 52.381 26.91 1.04 41.38 3.18
2816 3778 1.288350 CCAACCGTACGTGTGTTGAA 58.712 50.000 26.91 0.00 41.38 2.69
2817 3779 0.530211 CCCAACCGTACGTGTGTTGA 60.530 55.000 26.91 0.00 41.38 3.18
2818 3780 1.500512 CCCCAACCGTACGTGTGTTG 61.501 60.000 21.61 21.61 39.20 3.33
2819 3781 1.227615 CCCCAACCGTACGTGTGTT 60.228 57.895 15.21 8.50 0.00 3.32
2820 3782 1.684386 TTCCCCAACCGTACGTGTGT 61.684 55.000 15.21 1.81 0.00 3.72
2821 3783 0.947180 CTTCCCCAACCGTACGTGTG 60.947 60.000 15.21 11.18 0.00 3.82
2822 3784 1.114722 TCTTCCCCAACCGTACGTGT 61.115 55.000 15.21 8.99 0.00 4.49
2823 3785 0.668401 GTCTTCCCCAACCGTACGTG 60.668 60.000 15.21 6.71 0.00 4.49
2824 3786 1.667722 GTCTTCCCCAACCGTACGT 59.332 57.895 15.21 0.00 0.00 3.57
2825 3787 1.444895 CGTCTTCCCCAACCGTACG 60.445 63.158 8.69 8.69 0.00 3.67
2826 3788 0.389037 GACGTCTTCCCCAACCGTAC 60.389 60.000 8.70 0.00 0.00 3.67
2827 3789 0.540365 AGACGTCTTCCCCAACCGTA 60.540 55.000 13.58 0.00 0.00 4.02
2828 3790 1.813728 GAGACGTCTTCCCCAACCGT 61.814 60.000 21.08 0.00 0.00 4.83
2829 3791 1.080025 GAGACGTCTTCCCCAACCG 60.080 63.158 21.08 0.00 0.00 4.44
2830 3792 1.192803 AGGAGACGTCTTCCCCAACC 61.193 60.000 21.08 14.06 0.00 3.77
2831 3793 0.246910 GAGGAGACGTCTTCCCCAAC 59.753 60.000 21.08 10.67 0.00 3.77
2832 3794 0.903454 GGAGGAGACGTCTTCCCCAA 60.903 60.000 19.09 0.00 42.11 4.12
2833 3795 1.305046 GGAGGAGACGTCTTCCCCA 60.305 63.158 19.09 0.00 42.11 4.96
2834 3796 3.618652 GGAGGAGACGTCTTCCCC 58.381 66.667 21.08 14.98 42.11 4.81
2837 3799 2.820787 TCAAGAAGGAGGAGACGTCTTC 59.179 50.000 21.08 18.81 41.37 2.87
2838 3800 2.877866 TCAAGAAGGAGGAGACGTCTT 58.122 47.619 21.08 4.10 0.00 3.01
2839 3801 2.588464 TCAAGAAGGAGGAGACGTCT 57.412 50.000 20.18 20.18 0.00 4.18
2840 3802 2.100087 GGATCAAGAAGGAGGAGACGTC 59.900 54.545 7.70 7.70 0.00 4.34
2841 3803 2.104170 GGATCAAGAAGGAGGAGACGT 58.896 52.381 0.00 0.00 0.00 4.34
2842 3804 2.100584 CTGGATCAAGAAGGAGGAGACG 59.899 54.545 0.00 0.00 0.00 4.18
2843 3805 2.158971 GCTGGATCAAGAAGGAGGAGAC 60.159 54.545 0.00 0.00 0.00 3.36
2844 3806 2.114616 GCTGGATCAAGAAGGAGGAGA 58.885 52.381 0.00 0.00 0.00 3.71
2845 3807 1.836166 TGCTGGATCAAGAAGGAGGAG 59.164 52.381 0.00 0.00 0.00 3.69
2846 3808 1.956869 TGCTGGATCAAGAAGGAGGA 58.043 50.000 0.00 0.00 0.00 3.71
2847 3809 2.795231 TTGCTGGATCAAGAAGGAGG 57.205 50.000 0.00 0.00 0.00 4.30
2848 3810 2.950309 CCATTGCTGGATCAAGAAGGAG 59.050 50.000 0.00 0.00 46.37 3.69
2849 3811 2.357465 CCCATTGCTGGATCAAGAAGGA 60.357 50.000 0.00 0.00 46.37 3.36
2850 3812 2.029623 CCCATTGCTGGATCAAGAAGG 58.970 52.381 0.00 0.00 46.37 3.46
2851 3813 3.008835 TCCCATTGCTGGATCAAGAAG 57.991 47.619 0.00 0.00 46.37 2.85
2852 3814 3.359033 CTTCCCATTGCTGGATCAAGAA 58.641 45.455 0.00 0.00 46.37 2.52
2853 3815 2.357465 CCTTCCCATTGCTGGATCAAGA 60.357 50.000 0.00 0.00 46.37 3.02
2854 3816 2.029623 CCTTCCCATTGCTGGATCAAG 58.970 52.381 0.00 0.00 46.37 3.02
2855 3817 1.640149 TCCTTCCCATTGCTGGATCAA 59.360 47.619 0.00 0.00 46.37 2.57
2856 3818 1.213678 CTCCTTCCCATTGCTGGATCA 59.786 52.381 0.00 0.00 46.37 2.92
2857 3819 1.492176 TCTCCTTCCCATTGCTGGATC 59.508 52.381 0.00 0.00 46.37 3.36
2858 3820 1.493871 CTCTCCTTCCCATTGCTGGAT 59.506 52.381 0.00 0.00 46.37 3.41
2859 3821 0.914644 CTCTCCTTCCCATTGCTGGA 59.085 55.000 0.00 0.00 46.37 3.86
2860 3822 0.106819 CCTCTCCTTCCCATTGCTGG 60.107 60.000 0.00 0.00 42.73 4.85
2861 3823 0.622665 ACCTCTCCTTCCCATTGCTG 59.377 55.000 0.00 0.00 0.00 4.41
2862 3824 1.005215 CAACCTCTCCTTCCCATTGCT 59.995 52.381 0.00 0.00 0.00 3.91
2863 3825 1.004745 TCAACCTCTCCTTCCCATTGC 59.995 52.381 0.00 0.00 0.00 3.56
2864 3826 2.716217 GTCAACCTCTCCTTCCCATTG 58.284 52.381 0.00 0.00 0.00 2.82
2865 3827 1.279271 CGTCAACCTCTCCTTCCCATT 59.721 52.381 0.00 0.00 0.00 3.16
2866 3828 0.905357 CGTCAACCTCTCCTTCCCAT 59.095 55.000 0.00 0.00 0.00 4.00
2867 3829 1.192146 CCGTCAACCTCTCCTTCCCA 61.192 60.000 0.00 0.00 0.00 4.37
2868 3830 0.903454 TCCGTCAACCTCTCCTTCCC 60.903 60.000 0.00 0.00 0.00 3.97
2869 3831 0.533032 CTCCGTCAACCTCTCCTTCC 59.467 60.000 0.00 0.00 0.00 3.46
2870 3832 1.546961 TCTCCGTCAACCTCTCCTTC 58.453 55.000 0.00 0.00 0.00 3.46
2871 3833 2.104170 GATCTCCGTCAACCTCTCCTT 58.896 52.381 0.00 0.00 0.00 3.36
2872 3834 1.686741 GGATCTCCGTCAACCTCTCCT 60.687 57.143 0.00 0.00 0.00 3.69
2873 3835 0.747852 GGATCTCCGTCAACCTCTCC 59.252 60.000 0.00 0.00 0.00 3.71
2874 3836 1.407258 CTGGATCTCCGTCAACCTCTC 59.593 57.143 0.00 0.00 39.43 3.20
2875 3837 1.479709 CTGGATCTCCGTCAACCTCT 58.520 55.000 0.00 0.00 39.43 3.69
2876 3838 0.179097 GCTGGATCTCCGTCAACCTC 60.179 60.000 0.00 0.00 39.43 3.85
2877 3839 0.904865 TGCTGGATCTCCGTCAACCT 60.905 55.000 0.00 0.00 39.43 3.50
2878 3840 0.460987 CTGCTGGATCTCCGTCAACC 60.461 60.000 0.00 0.00 39.43 3.77
2879 3841 1.086634 GCTGCTGGATCTCCGTCAAC 61.087 60.000 0.00 0.00 39.43 3.18
2880 3842 1.219124 GCTGCTGGATCTCCGTCAA 59.781 57.895 0.00 0.00 39.43 3.18
2881 3843 1.984026 TGCTGCTGGATCTCCGTCA 60.984 57.895 0.00 0.00 39.43 4.35
2882 3844 1.520342 GTGCTGCTGGATCTCCGTC 60.520 63.158 0.00 0.00 39.43 4.79
2883 3845 1.830587 TTGTGCTGCTGGATCTCCGT 61.831 55.000 0.00 0.00 39.43 4.69
2884 3846 1.078918 TTGTGCTGCTGGATCTCCG 60.079 57.895 0.00 0.00 39.43 4.63
2885 3847 1.364626 CGTTGTGCTGCTGGATCTCC 61.365 60.000 0.00 0.00 0.00 3.71
2886 3848 1.364626 CCGTTGTGCTGCTGGATCTC 61.365 60.000 0.00 0.00 0.00 2.75
2887 3849 1.376424 CCGTTGTGCTGCTGGATCT 60.376 57.895 0.00 0.00 0.00 2.75
2888 3850 3.044059 GCCGTTGTGCTGCTGGATC 62.044 63.158 0.00 0.00 0.00 3.36
2889 3851 3.058160 GCCGTTGTGCTGCTGGAT 61.058 61.111 0.00 0.00 0.00 3.41
2892 3854 4.671549 CACGCCGTTGTGCTGCTG 62.672 66.667 0.00 0.00 32.31 4.41
2895 3857 4.312231 CACCACGCCGTTGTGCTG 62.312 66.667 8.58 0.00 38.55 4.41
2898 3860 3.947841 CACCACCACGCCGTTGTG 61.948 66.667 13.93 13.93 39.60 3.33
2900 3862 4.920112 TCCACCACCACGCCGTTG 62.920 66.667 0.00 0.00 0.00 4.10
2901 3863 4.178169 TTCCACCACCACGCCGTT 62.178 61.111 0.00 0.00 0.00 4.44
2902 3864 4.619227 CTTCCACCACCACGCCGT 62.619 66.667 0.00 0.00 0.00 5.68
2903 3865 3.229156 TACTTCCACCACCACGCCG 62.229 63.158 0.00 0.00 0.00 6.46
2904 3866 1.375523 CTACTTCCACCACCACGCC 60.376 63.158 0.00 0.00 0.00 5.68
2905 3867 2.033194 GCTACTTCCACCACCACGC 61.033 63.158 0.00 0.00 0.00 5.34
2906 3868 1.736645 CGCTACTTCCACCACCACG 60.737 63.158 0.00 0.00 0.00 4.94
2907 3869 1.375523 CCGCTACTTCCACCACCAC 60.376 63.158 0.00 0.00 0.00 4.16
2908 3870 3.065306 CCGCTACTTCCACCACCA 58.935 61.111 0.00 0.00 0.00 4.17
2909 3871 2.436115 GCCGCTACTTCCACCACC 60.436 66.667 0.00 0.00 0.00 4.61
2910 3872 2.573609 ATCGCCGCTACTTCCACCAC 62.574 60.000 0.00 0.00 0.00 4.16
2911 3873 2.292794 GATCGCCGCTACTTCCACCA 62.293 60.000 0.00 0.00 0.00 4.17
2912 3874 1.591863 GATCGCCGCTACTTCCACC 60.592 63.158 0.00 0.00 0.00 4.61
2913 3875 0.595310 GAGATCGCCGCTACTTCCAC 60.595 60.000 0.00 0.00 0.00 4.02
2914 3876 1.734137 GAGATCGCCGCTACTTCCA 59.266 57.895 0.00 0.00 0.00 3.53
2915 3877 1.370657 CGAGATCGCCGCTACTTCC 60.371 63.158 0.00 0.00 0.00 3.46
2916 3878 1.370657 CCGAGATCGCCGCTACTTC 60.371 63.158 0.00 0.00 38.18 3.01
2917 3879 2.722487 CCGAGATCGCCGCTACTT 59.278 61.111 0.00 0.00 38.18 2.24
2918 3880 3.967335 GCCGAGATCGCCGCTACT 61.967 66.667 2.74 0.00 38.18 2.57
2919 3881 4.266070 TGCCGAGATCGCCGCTAC 62.266 66.667 10.65 1.86 38.18 3.58
2920 3882 3.966104 CTGCCGAGATCGCCGCTA 61.966 66.667 10.65 0.00 38.18 4.26
2925 3887 4.537433 AAGCCCTGCCGAGATCGC 62.537 66.667 0.00 0.00 38.18 4.58
2926 3888 2.279784 GAAGCCCTGCCGAGATCG 60.280 66.667 0.00 0.00 39.44 3.69
2927 3889 2.279784 CGAAGCCCTGCCGAGATC 60.280 66.667 0.00 0.00 0.00 2.75
2944 3906 2.511145 CCTCTCGCTGAGCTTGGC 60.511 66.667 1.78 0.00 41.35 4.52
2945 3907 2.186384 CCCTCTCGCTGAGCTTGG 59.814 66.667 1.78 0.00 41.35 3.61
2946 3908 1.141449 CTCCCTCTCGCTGAGCTTG 59.859 63.158 1.78 0.00 41.35 4.01
2947 3909 1.000270 TCTCCCTCTCGCTGAGCTT 60.000 57.895 1.78 0.00 41.35 3.74
2948 3910 1.453745 CTCTCCCTCTCGCTGAGCT 60.454 63.158 1.78 0.00 41.35 4.09
2949 3911 2.489275 CCTCTCCCTCTCGCTGAGC 61.489 68.421 0.00 0.00 41.35 4.26
2950 3912 1.077068 ACCTCTCCCTCTCGCTGAG 60.077 63.158 0.00 0.00 42.30 3.35
2951 3913 1.379176 CACCTCTCCCTCTCGCTGA 60.379 63.158 0.00 0.00 0.00 4.26
2952 3914 2.422231 CCACCTCTCCCTCTCGCTG 61.422 68.421 0.00 0.00 0.00 5.18
2953 3915 1.572689 TACCACCTCTCCCTCTCGCT 61.573 60.000 0.00 0.00 0.00 4.93
2954 3916 1.076923 TACCACCTCTCCCTCTCGC 60.077 63.158 0.00 0.00 0.00 5.03
2955 3917 1.096386 CGTACCACCTCTCCCTCTCG 61.096 65.000 0.00 0.00 0.00 4.04
2956 3918 0.752376 CCGTACCACCTCTCCCTCTC 60.752 65.000 0.00 0.00 0.00 3.20
2957 3919 1.306970 CCGTACCACCTCTCCCTCT 59.693 63.158 0.00 0.00 0.00 3.69
2958 3920 1.757340 CCCGTACCACCTCTCCCTC 60.757 68.421 0.00 0.00 0.00 4.30
2959 3921 2.363361 CCCGTACCACCTCTCCCT 59.637 66.667 0.00 0.00 0.00 4.20
2960 3922 2.762875 CCCCGTACCACCTCTCCC 60.763 72.222 0.00 0.00 0.00 4.30
2961 3923 2.762875 CCCCCGTACCACCTCTCC 60.763 72.222 0.00 0.00 0.00 3.71


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.