Multiple sequence alignment - TraesCS4B01G013100
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS4B01G013100 | chr4B | 100.000 | 4858 | 0 | 0 | 1 | 4858 | 8984921 | 8980064 | 0.000000e+00 | 8972.0 |
1 | TraesCS4B01G013100 | chr4A | 95.821 | 1029 | 38 | 3 | 903 | 1931 | 598590211 | 598591234 | 0.000000e+00 | 1657.0 |
2 | TraesCS4B01G013100 | chr4A | 87.374 | 697 | 54 | 16 | 3666 | 4356 | 598591655 | 598592323 | 0.000000e+00 | 769.0 |
3 | TraesCS4B01G013100 | chr4A | 93.853 | 423 | 22 | 3 | 4438 | 4858 | 598592321 | 598592741 | 6.860000e-178 | 634.0 |
4 | TraesCS4B01G013100 | chr4A | 94.975 | 199 | 9 | 1 | 691 | 889 | 598589750 | 598589947 | 1.310000e-80 | 311.0 |
5 | TraesCS4B01G013100 | chr4A | 92.547 | 161 | 9 | 3 | 19 | 178 | 598589593 | 598589751 | 1.360000e-55 | 228.0 |
6 | TraesCS4B01G013100 | chr4D | 95.203 | 959 | 19 | 6 | 695 | 1634 | 5103602 | 5102652 | 0.000000e+00 | 1491.0 |
7 | TraesCS4B01G013100 | chr4D | 87.923 | 1035 | 77 | 25 | 3331 | 4326 | 5101599 | 5100574 | 0.000000e+00 | 1175.0 |
8 | TraesCS4B01G013100 | chr4D | 93.290 | 462 | 21 | 7 | 1 | 458 | 5104530 | 5104075 | 0.000000e+00 | 673.0 |
9 | TraesCS4B01G013100 | chr4D | 91.294 | 425 | 31 | 4 | 4438 | 4858 | 5100547 | 5100125 | 4.220000e-160 | 575.0 |
10 | TraesCS4B01G013100 | chr4D | 87.626 | 396 | 35 | 8 | 2001 | 2389 | 5102094 | 5101706 | 9.590000e-122 | 448.0 |
11 | TraesCS4B01G013100 | chr4D | 83.843 | 229 | 35 | 2 | 3129 | 3356 | 13249168 | 13249395 | 2.940000e-52 | 217.0 |
12 | TraesCS4B01G013100 | chr4D | 90.260 | 154 | 6 | 6 | 556 | 707 | 5104074 | 5103928 | 4.960000e-45 | 193.0 |
13 | TraesCS4B01G013100 | chr4D | 79.443 | 287 | 33 | 18 | 2469 | 2742 | 389188174 | 389187901 | 3.860000e-41 | 180.0 |
14 | TraesCS4B01G013100 | chr4D | 77.564 | 312 | 40 | 15 | 2439 | 2744 | 215168002 | 215168289 | 1.400000e-35 | 161.0 |
15 | TraesCS4B01G013100 | chr4D | 100.000 | 31 | 0 | 0 | 3531 | 3561 | 71064705 | 71064675 | 1.890000e-04 | 58.4 |
16 | TraesCS4B01G013100 | chrUn | 98.747 | 399 | 5 | 0 | 958 | 1356 | 478875199 | 478875597 | 0.000000e+00 | 710.0 |
17 | TraesCS4B01G013100 | chrUn | 79.144 | 187 | 23 | 13 | 2550 | 2723 | 33553 | 33736 | 1.100000e-21 | 115.0 |
18 | TraesCS4B01G013100 | chr7A | 75.866 | 895 | 141 | 47 | 2474 | 3301 | 143742497 | 143741611 | 2.120000e-103 | 387.0 |
19 | TraesCS4B01G013100 | chr7A | 76.246 | 602 | 89 | 34 | 2799 | 3359 | 13782477 | 13783065 | 2.230000e-68 | 270.0 |
20 | TraesCS4B01G013100 | chr7A | 78.458 | 441 | 63 | 22 | 2805 | 3225 | 139195330 | 139194902 | 4.820000e-65 | 259.0 |
21 | TraesCS4B01G013100 | chr7A | 84.270 | 178 | 24 | 3 | 2382 | 2556 | 92477362 | 92477538 | 2.330000e-38 | 171.0 |
22 | TraesCS4B01G013100 | chr7A | 94.792 | 96 | 4 | 1 | 4347 | 4442 | 733162325 | 733162231 | 1.090000e-31 | 148.0 |
23 | TraesCS4B01G013100 | chr7A | 96.629 | 89 | 3 | 0 | 4354 | 4442 | 733162232 | 733162320 | 1.090000e-31 | 148.0 |
24 | TraesCS4B01G013100 | chr7A | 87.952 | 83 | 7 | 2 | 3499 | 3579 | 619873563 | 619873644 | 1.440000e-15 | 95.3 |
25 | TraesCS4B01G013100 | chr5A | 85.393 | 356 | 50 | 2 | 1028 | 1382 | 32702686 | 32703040 | 7.680000e-98 | 368.0 |
26 | TraesCS4B01G013100 | chr5A | 74.775 | 555 | 108 | 22 | 2800 | 3339 | 356443248 | 356442711 | 2.280000e-53 | 220.0 |
27 | TraesCS4B01G013100 | chr5A | 78.846 | 312 | 45 | 16 | 2798 | 3099 | 429004397 | 429004097 | 1.780000e-44 | 191.0 |
28 | TraesCS4B01G013100 | chr5A | 97.959 | 49 | 1 | 0 | 3520 | 3568 | 663716472 | 663716424 | 8.660000e-13 | 86.1 |
29 | TraesCS4B01G013100 | chr3B | 74.409 | 1016 | 163 | 59 | 2382 | 3339 | 519393096 | 519394072 | 3.600000e-91 | 346.0 |
30 | TraesCS4B01G013100 | chr3B | 78.713 | 202 | 35 | 6 | 2412 | 2607 | 171166641 | 171166442 | 1.420000e-25 | 128.0 |
31 | TraesCS4B01G013100 | chr1B | 78.431 | 561 | 82 | 25 | 2805 | 3335 | 607313538 | 607312987 | 3.620000e-86 | 329.0 |
32 | TraesCS4B01G013100 | chr1B | 78.016 | 373 | 51 | 21 | 2382 | 2744 | 61453295 | 61452944 | 6.370000e-49 | 206.0 |
33 | TraesCS4B01G013100 | chr1B | 78.313 | 249 | 34 | 13 | 2501 | 2733 | 540478456 | 540478212 | 5.070000e-30 | 143.0 |
34 | TraesCS4B01G013100 | chr1A | 77.949 | 585 | 85 | 19 | 2805 | 3348 | 290366758 | 290366177 | 4.690000e-85 | 326.0 |
35 | TraesCS4B01G013100 | chr1A | 77.257 | 576 | 88 | 27 | 2805 | 3347 | 541450803 | 541450238 | 1.020000e-76 | 298.0 |
36 | TraesCS4B01G013100 | chr1A | 75.789 | 570 | 98 | 24 | 2798 | 3339 | 551652372 | 551652929 | 8.070000e-63 | 252.0 |
37 | TraesCS4B01G013100 | chr1A | 97.222 | 36 | 1 | 0 | 2347 | 2382 | 425051404 | 425051369 | 1.460000e-05 | 62.1 |
38 | TraesCS4B01G013100 | chr1A | 96.875 | 32 | 1 | 0 | 2351 | 2382 | 103329311 | 103329280 | 2.000000e-03 | 54.7 |
39 | TraesCS4B01G013100 | chr2D | 77.816 | 577 | 87 | 17 | 2804 | 3354 | 60782398 | 60782959 | 7.850000e-83 | 318.0 |
40 | TraesCS4B01G013100 | chr2D | 80.533 | 375 | 41 | 21 | 2382 | 2744 | 578936287 | 578935933 | 4.820000e-65 | 259.0 |
41 | TraesCS4B01G013100 | chr2D | 78.667 | 375 | 51 | 16 | 2378 | 2735 | 55317545 | 55317907 | 6.330000e-54 | 222.0 |
42 | TraesCS4B01G013100 | chr2D | 78.284 | 373 | 51 | 18 | 2382 | 2735 | 470062059 | 470061698 | 3.810000e-51 | 213.0 |
43 | TraesCS4B01G013100 | chr2D | 83.478 | 230 | 37 | 1 | 3115 | 3343 | 578935391 | 578935162 | 3.810000e-51 | 213.0 |
44 | TraesCS4B01G013100 | chr2D | 79.842 | 253 | 47 | 4 | 3111 | 3361 | 303509273 | 303509523 | 1.070000e-41 | 182.0 |
45 | TraesCS4B01G013100 | chr2D | 96.629 | 89 | 3 | 0 | 4354 | 4442 | 52898237 | 52898149 | 1.090000e-31 | 148.0 |
46 | TraesCS4B01G013100 | chr2D | 91.262 | 103 | 7 | 2 | 4340 | 4442 | 311325441 | 311325341 | 6.560000e-29 | 139.0 |
47 | TraesCS4B01G013100 | chr2D | 79.630 | 108 | 21 | 1 | 2206 | 2312 | 480298793 | 480298900 | 5.210000e-10 | 76.8 |
48 | TraesCS4B01G013100 | chr1D | 76.857 | 579 | 89 | 22 | 2800 | 3343 | 477787509 | 477786941 | 7.960000e-73 | 285.0 |
49 | TraesCS4B01G013100 | chr1D | 93.750 | 96 | 5 | 1 | 4347 | 4442 | 180698116 | 180698022 | 5.070000e-30 | 143.0 |
50 | TraesCS4B01G013100 | chr1D | 96.364 | 55 | 2 | 0 | 3507 | 3561 | 59837966 | 59838020 | 1.860000e-14 | 91.6 |
51 | TraesCS4B01G013100 | chr7D | 75.993 | 554 | 91 | 29 | 2805 | 3348 | 591272522 | 591273043 | 1.040000e-61 | 248.0 |
52 | TraesCS4B01G013100 | chr5B | 75.433 | 578 | 105 | 18 | 2798 | 3356 | 485730239 | 485729680 | 3.760000e-61 | 246.0 |
53 | TraesCS4B01G013100 | chr5B | 78.723 | 376 | 55 | 19 | 2384 | 2742 | 532598451 | 532598084 | 1.360000e-55 | 228.0 |
54 | TraesCS4B01G013100 | chr5B | 89.720 | 107 | 10 | 1 | 4352 | 4457 | 230507519 | 230507625 | 8.480000e-28 | 135.0 |
55 | TraesCS4B01G013100 | chr5B | 93.182 | 44 | 3 | 0 | 3540 | 3583 | 414830252 | 414830295 | 1.130000e-06 | 65.8 |
56 | TraesCS4B01G013100 | chr7B | 84.979 | 233 | 32 | 3 | 3120 | 3351 | 586310699 | 586310469 | 2.920000e-57 | 233.0 |
57 | TraesCS4B01G013100 | chr7B | 75.781 | 512 | 74 | 26 | 2805 | 3289 | 638516697 | 638516209 | 3.810000e-51 | 213.0 |
58 | TraesCS4B01G013100 | chr7B | 93.056 | 72 | 5 | 0 | 3500 | 3571 | 297400583 | 297400654 | 6.650000e-19 | 106.0 |
59 | TraesCS4B01G013100 | chr7B | 85.484 | 62 | 8 | 1 | 2251 | 2312 | 20101873 | 20101813 | 4.060000e-06 | 63.9 |
60 | TraesCS4B01G013100 | chr3A | 80.645 | 310 | 48 | 10 | 2417 | 2722 | 11418612 | 11418311 | 3.780000e-56 | 230.0 |
61 | TraesCS4B01G013100 | chr3A | 77.746 | 346 | 48 | 19 | 2382 | 2721 | 343228600 | 343228278 | 8.300000e-43 | 185.0 |
62 | TraesCS4B01G013100 | chr3A | 100.000 | 38 | 0 | 0 | 2345 | 2382 | 123894797 | 123894834 | 2.430000e-08 | 71.3 |
63 | TraesCS4B01G013100 | chr5D | 79.006 | 362 | 53 | 13 | 2382 | 2735 | 9943789 | 9943443 | 4.890000e-55 | 226.0 |
64 | TraesCS4B01G013100 | chr5D | 94.792 | 96 | 4 | 1 | 4347 | 4442 | 65386822 | 65386916 | 1.090000e-31 | 148.0 |
65 | TraesCS4B01G013100 | chr5D | 92.708 | 96 | 6 | 1 | 4347 | 4442 | 379034247 | 379034153 | 2.360000e-28 | 137.0 |
66 | TraesCS4B01G013100 | chr6D | 92.857 | 98 | 6 | 1 | 4354 | 4451 | 301102151 | 301102247 | 1.820000e-29 | 141.0 |
67 | TraesCS4B01G013100 | chr6D | 74.719 | 356 | 55 | 24 | 2548 | 2882 | 81921117 | 81921458 | 5.100000e-25 | 126.0 |
68 | TraesCS4B01G013100 | chr3D | 76.950 | 282 | 39 | 16 | 2382 | 2656 | 268070552 | 268070290 | 2.360000e-28 | 137.0 |
69 | TraesCS4B01G013100 | chr3D | 94.444 | 36 | 2 | 0 | 2347 | 2382 | 593219376 | 593219341 | 6.790000e-04 | 56.5 |
70 | TraesCS4B01G013100 | chr2B | 81.457 | 151 | 26 | 2 | 2422 | 2572 | 16879952 | 16879804 | 6.600000e-24 | 122.0 |
71 | TraesCS4B01G013100 | chr2B | 91.549 | 71 | 6 | 0 | 3511 | 3581 | 518046461 | 518046531 | 1.110000e-16 | 99.0 |
72 | TraesCS4B01G013100 | chr2B | 79.630 | 108 | 21 | 1 | 2206 | 2312 | 751009285 | 751009178 | 5.210000e-10 | 76.8 |
73 | TraesCS4B01G013100 | chr6A | 92.683 | 41 | 2 | 1 | 2347 | 2387 | 230180346 | 230180307 | 1.890000e-04 | 58.4 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS4B01G013100 | chr4B | 8980064 | 8984921 | 4857 | True | 8972.000000 | 8972 | 100.000000 | 1 | 4858 | 1 | chr4B.!!$R1 | 4857 |
1 | TraesCS4B01G013100 | chr4A | 598589593 | 598592741 | 3148 | False | 719.800000 | 1657 | 92.914000 | 19 | 4858 | 5 | chr4A.!!$F1 | 4839 |
2 | TraesCS4B01G013100 | chr4D | 5100125 | 5104530 | 4405 | True | 759.166667 | 1491 | 90.932667 | 1 | 4858 | 6 | chr4D.!!$R3 | 4857 |
3 | TraesCS4B01G013100 | chr7A | 143741611 | 143742497 | 886 | True | 387.000000 | 387 | 75.866000 | 2474 | 3301 | 1 | chr7A.!!$R2 | 827 |
4 | TraesCS4B01G013100 | chr7A | 13782477 | 13783065 | 588 | False | 270.000000 | 270 | 76.246000 | 2799 | 3359 | 1 | chr7A.!!$F1 | 560 |
5 | TraesCS4B01G013100 | chr5A | 356442711 | 356443248 | 537 | True | 220.000000 | 220 | 74.775000 | 2800 | 3339 | 1 | chr5A.!!$R1 | 539 |
6 | TraesCS4B01G013100 | chr3B | 519393096 | 519394072 | 976 | False | 346.000000 | 346 | 74.409000 | 2382 | 3339 | 1 | chr3B.!!$F1 | 957 |
7 | TraesCS4B01G013100 | chr1B | 607312987 | 607313538 | 551 | True | 329.000000 | 329 | 78.431000 | 2805 | 3335 | 1 | chr1B.!!$R3 | 530 |
8 | TraesCS4B01G013100 | chr1A | 290366177 | 290366758 | 581 | True | 326.000000 | 326 | 77.949000 | 2805 | 3348 | 1 | chr1A.!!$R2 | 543 |
9 | TraesCS4B01G013100 | chr1A | 541450238 | 541450803 | 565 | True | 298.000000 | 298 | 77.257000 | 2805 | 3347 | 1 | chr1A.!!$R4 | 542 |
10 | TraesCS4B01G013100 | chr1A | 551652372 | 551652929 | 557 | False | 252.000000 | 252 | 75.789000 | 2798 | 3339 | 1 | chr1A.!!$F1 | 541 |
11 | TraesCS4B01G013100 | chr2D | 60782398 | 60782959 | 561 | False | 318.000000 | 318 | 77.816000 | 2804 | 3354 | 1 | chr2D.!!$F2 | 550 |
12 | TraesCS4B01G013100 | chr2D | 578935162 | 578936287 | 1125 | True | 236.000000 | 259 | 82.005500 | 2382 | 3343 | 2 | chr2D.!!$R4 | 961 |
13 | TraesCS4B01G013100 | chr1D | 477786941 | 477787509 | 568 | True | 285.000000 | 285 | 76.857000 | 2800 | 3343 | 1 | chr1D.!!$R2 | 543 |
14 | TraesCS4B01G013100 | chr7D | 591272522 | 591273043 | 521 | False | 248.000000 | 248 | 75.993000 | 2805 | 3348 | 1 | chr7D.!!$F1 | 543 |
15 | TraesCS4B01G013100 | chr5B | 485729680 | 485730239 | 559 | True | 246.000000 | 246 | 75.433000 | 2798 | 3356 | 1 | chr5B.!!$R1 | 558 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
542 | 548 | 0.040958 | GCTCGAATAATGGCGCTTGG | 60.041 | 55.0 | 7.64 | 0.0 | 0.00 | 3.61 | F |
1832 | 2426 | 0.035739 | GCCCTTGAGTTGTAACGGGA | 59.964 | 55.0 | 8.93 | 0.0 | 33.46 | 5.14 | F |
2399 | 3316 | 0.033781 | TACTAGCAAAACGCCCGTGT | 59.966 | 50.0 | 0.00 | 0.0 | 44.04 | 4.49 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
1938 | 2532 | 0.110056 | CGCAAATATGATGAGCGGGC | 60.11 | 55.0 | 0.00 | 0.0 | 44.20 | 6.13 | R |
3713 | 5057 | 1.009829 | GTGGCTTGCTAACATCCTCG | 58.99 | 55.0 | 0.00 | 0.0 | 0.00 | 4.63 | R |
4257 | 5614 | 0.109781 | GTGGTTTCGATGTTGCGCAT | 60.11 | 50.0 | 12.75 | 0.0 | 41.24 | 4.73 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
111 | 113 | 5.901552 | AGTTAATGGTGTCACAAAAACAGG | 58.098 | 37.500 | 5.12 | 0.00 | 0.00 | 4.00 |
232 | 236 | 2.548875 | GTGTTTTGCCAGCATTCACAA | 58.451 | 42.857 | 13.48 | 0.00 | 0.00 | 3.33 |
284 | 290 | 9.643693 | ATTTGAGTTTTGAAACATGGTATCATC | 57.356 | 29.630 | 9.08 | 0.00 | 41.30 | 2.92 |
316 | 322 | 6.013725 | TGTGATATATCCCCCTCACAACATAC | 60.014 | 42.308 | 10.25 | 0.00 | 43.54 | 2.39 |
317 | 323 | 6.013725 | GTGATATATCCCCCTCACAACATACA | 60.014 | 42.308 | 10.25 | 0.00 | 38.28 | 2.29 |
398 | 404 | 8.217111 | TGTATTTTGAGCTGGGTGATATGATAA | 58.783 | 33.333 | 0.00 | 0.00 | 0.00 | 1.75 |
399 | 405 | 6.942532 | TTTTGAGCTGGGTGATATGATAAC | 57.057 | 37.500 | 0.00 | 0.00 | 0.00 | 1.89 |
424 | 430 | 3.745975 | TCTCAAAGCCAACATACAACTCG | 59.254 | 43.478 | 0.00 | 0.00 | 0.00 | 4.18 |
425 | 431 | 2.811431 | TCAAAGCCAACATACAACTCGG | 59.189 | 45.455 | 0.00 | 0.00 | 0.00 | 4.63 |
431 | 437 | 0.322322 | AACATACAACTCGGGCGGAA | 59.678 | 50.000 | 0.00 | 0.00 | 0.00 | 4.30 |
433 | 439 | 1.006832 | CATACAACTCGGGCGGAAAG | 58.993 | 55.000 | 0.00 | 0.00 | 0.00 | 2.62 |
455 | 461 | 3.240134 | AAGCCGATGTGCGTCCACT | 62.240 | 57.895 | 0.00 | 0.00 | 42.54 | 4.00 |
458 | 464 | 2.094659 | CCGATGTGCGTCCACTCAC | 61.095 | 63.158 | 0.00 | 0.00 | 42.54 | 3.51 |
459 | 465 | 1.372872 | CGATGTGCGTCCACTCACA | 60.373 | 57.895 | 5.05 | 5.05 | 44.37 | 3.58 |
460 | 466 | 0.943835 | CGATGTGCGTCCACTCACAA | 60.944 | 55.000 | 6.61 | 0.00 | 43.62 | 3.33 |
461 | 467 | 0.512952 | GATGTGCGTCCACTCACAAC | 59.487 | 55.000 | 6.61 | 0.95 | 43.62 | 3.32 |
462 | 468 | 0.106708 | ATGTGCGTCCACTCACAACT | 59.893 | 50.000 | 6.61 | 0.00 | 43.62 | 3.16 |
463 | 469 | 0.747852 | TGTGCGTCCACTCACAACTA | 59.252 | 50.000 | 0.00 | 0.00 | 38.47 | 2.24 |
464 | 470 | 1.137282 | TGTGCGTCCACTCACAACTAA | 59.863 | 47.619 | 0.00 | 0.00 | 38.47 | 2.24 |
465 | 471 | 1.525619 | GTGCGTCCACTCACAACTAAC | 59.474 | 52.381 | 0.00 | 0.00 | 38.93 | 2.34 |
466 | 472 | 1.137282 | TGCGTCCACTCACAACTAACA | 59.863 | 47.619 | 0.00 | 0.00 | 0.00 | 2.41 |
467 | 473 | 1.525619 | GCGTCCACTCACAACTAACAC | 59.474 | 52.381 | 0.00 | 0.00 | 0.00 | 3.32 |
468 | 474 | 2.132762 | CGTCCACTCACAACTAACACC | 58.867 | 52.381 | 0.00 | 0.00 | 0.00 | 4.16 |
469 | 475 | 2.490991 | GTCCACTCACAACTAACACCC | 58.509 | 52.381 | 0.00 | 0.00 | 0.00 | 4.61 |
470 | 476 | 1.418637 | TCCACTCACAACTAACACCCC | 59.581 | 52.381 | 0.00 | 0.00 | 0.00 | 4.95 |
471 | 477 | 1.142060 | CCACTCACAACTAACACCCCA | 59.858 | 52.381 | 0.00 | 0.00 | 0.00 | 4.96 |
472 | 478 | 2.218603 | CACTCACAACTAACACCCCAC | 58.781 | 52.381 | 0.00 | 0.00 | 0.00 | 4.61 |
473 | 479 | 1.841277 | ACTCACAACTAACACCCCACA | 59.159 | 47.619 | 0.00 | 0.00 | 0.00 | 4.17 |
474 | 480 | 2.218603 | CTCACAACTAACACCCCACAC | 58.781 | 52.381 | 0.00 | 0.00 | 0.00 | 3.82 |
475 | 481 | 0.941542 | CACAACTAACACCCCACACG | 59.058 | 55.000 | 0.00 | 0.00 | 0.00 | 4.49 |
476 | 482 | 0.542805 | ACAACTAACACCCCACACGT | 59.457 | 50.000 | 0.00 | 0.00 | 0.00 | 4.49 |
477 | 483 | 1.223187 | CAACTAACACCCCACACGTC | 58.777 | 55.000 | 0.00 | 0.00 | 0.00 | 4.34 |
478 | 484 | 0.831966 | AACTAACACCCCACACGTCA | 59.168 | 50.000 | 0.00 | 0.00 | 0.00 | 4.35 |
479 | 485 | 0.391597 | ACTAACACCCCACACGTCAG | 59.608 | 55.000 | 0.00 | 0.00 | 0.00 | 3.51 |
480 | 486 | 0.320421 | CTAACACCCCACACGTCAGG | 60.320 | 60.000 | 0.00 | 0.00 | 0.00 | 3.86 |
481 | 487 | 1.049855 | TAACACCCCACACGTCAGGT | 61.050 | 55.000 | 2.42 | 0.00 | 0.00 | 4.00 |
482 | 488 | 2.030562 | CACCCCACACGTCAGGTC | 59.969 | 66.667 | 2.42 | 0.00 | 0.00 | 3.85 |
483 | 489 | 3.239253 | ACCCCACACGTCAGGTCC | 61.239 | 66.667 | 2.42 | 0.00 | 0.00 | 4.46 |
484 | 490 | 2.923035 | CCCCACACGTCAGGTCCT | 60.923 | 66.667 | 2.42 | 0.00 | 0.00 | 3.85 |
485 | 491 | 2.657237 | CCCACACGTCAGGTCCTC | 59.343 | 66.667 | 0.00 | 0.00 | 0.00 | 3.71 |
486 | 492 | 2.207229 | CCCACACGTCAGGTCCTCA | 61.207 | 63.158 | 0.00 | 0.00 | 0.00 | 3.86 |
487 | 493 | 1.544825 | CCCACACGTCAGGTCCTCAT | 61.545 | 60.000 | 0.00 | 0.00 | 0.00 | 2.90 |
488 | 494 | 0.108615 | CCACACGTCAGGTCCTCATC | 60.109 | 60.000 | 0.00 | 0.00 | 0.00 | 2.92 |
489 | 495 | 0.603065 | CACACGTCAGGTCCTCATCA | 59.397 | 55.000 | 0.00 | 0.00 | 0.00 | 3.07 |
490 | 496 | 1.000843 | CACACGTCAGGTCCTCATCAA | 59.999 | 52.381 | 0.00 | 0.00 | 0.00 | 2.57 |
491 | 497 | 1.691976 | ACACGTCAGGTCCTCATCAAA | 59.308 | 47.619 | 0.00 | 0.00 | 0.00 | 2.69 |
492 | 498 | 2.303022 | ACACGTCAGGTCCTCATCAAAT | 59.697 | 45.455 | 0.00 | 0.00 | 0.00 | 2.32 |
493 | 499 | 3.244561 | ACACGTCAGGTCCTCATCAAATT | 60.245 | 43.478 | 0.00 | 0.00 | 0.00 | 1.82 |
494 | 500 | 3.372206 | CACGTCAGGTCCTCATCAAATTC | 59.628 | 47.826 | 0.00 | 0.00 | 0.00 | 2.17 |
495 | 501 | 3.261897 | ACGTCAGGTCCTCATCAAATTCT | 59.738 | 43.478 | 0.00 | 0.00 | 0.00 | 2.40 |
496 | 502 | 3.868077 | CGTCAGGTCCTCATCAAATTCTC | 59.132 | 47.826 | 0.00 | 0.00 | 0.00 | 2.87 |
497 | 503 | 4.621510 | CGTCAGGTCCTCATCAAATTCTCA | 60.622 | 45.833 | 0.00 | 0.00 | 0.00 | 3.27 |
498 | 504 | 5.435291 | GTCAGGTCCTCATCAAATTCTCAT | 58.565 | 41.667 | 0.00 | 0.00 | 0.00 | 2.90 |
499 | 505 | 5.296283 | GTCAGGTCCTCATCAAATTCTCATG | 59.704 | 44.000 | 0.00 | 0.00 | 0.00 | 3.07 |
500 | 506 | 5.045359 | TCAGGTCCTCATCAAATTCTCATGT | 60.045 | 40.000 | 0.00 | 0.00 | 0.00 | 3.21 |
501 | 507 | 5.066117 | CAGGTCCTCATCAAATTCTCATGTG | 59.934 | 44.000 | 0.00 | 0.00 | 0.00 | 3.21 |
502 | 508 | 4.946157 | GGTCCTCATCAAATTCTCATGTGT | 59.054 | 41.667 | 0.00 | 0.00 | 0.00 | 3.72 |
503 | 509 | 5.416952 | GGTCCTCATCAAATTCTCATGTGTT | 59.583 | 40.000 | 0.00 | 0.00 | 0.00 | 3.32 |
504 | 510 | 6.320171 | GTCCTCATCAAATTCTCATGTGTTG | 58.680 | 40.000 | 0.00 | 0.00 | 0.00 | 3.33 |
505 | 511 | 6.005823 | TCCTCATCAAATTCTCATGTGTTGT | 58.994 | 36.000 | 0.00 | 0.00 | 0.00 | 3.32 |
506 | 512 | 6.072342 | TCCTCATCAAATTCTCATGTGTTGTG | 60.072 | 38.462 | 0.00 | 0.00 | 0.00 | 3.33 |
507 | 513 | 5.463286 | TCATCAAATTCTCATGTGTTGTGC | 58.537 | 37.500 | 0.00 | 0.00 | 0.00 | 4.57 |
508 | 514 | 4.241590 | TCAAATTCTCATGTGTTGTGCC | 57.758 | 40.909 | 0.00 | 0.00 | 0.00 | 5.01 |
509 | 515 | 3.635836 | TCAAATTCTCATGTGTTGTGCCA | 59.364 | 39.130 | 0.00 | 0.00 | 0.00 | 4.92 |
510 | 516 | 4.281435 | TCAAATTCTCATGTGTTGTGCCAT | 59.719 | 37.500 | 0.00 | 0.00 | 0.00 | 4.40 |
511 | 517 | 3.861276 | ATTCTCATGTGTTGTGCCATG | 57.139 | 42.857 | 0.00 | 0.00 | 39.82 | 3.66 |
512 | 518 | 2.565046 | TCTCATGTGTTGTGCCATGA | 57.435 | 45.000 | 0.00 | 0.00 | 43.77 | 3.07 |
513 | 519 | 2.153645 | TCTCATGTGTTGTGCCATGAC | 58.846 | 47.619 | 0.00 | 0.00 | 41.77 | 3.06 |
514 | 520 | 1.881324 | CTCATGTGTTGTGCCATGACA | 59.119 | 47.619 | 0.00 | 0.00 | 41.77 | 3.58 |
515 | 521 | 2.293955 | CTCATGTGTTGTGCCATGACAA | 59.706 | 45.455 | 0.00 | 0.00 | 41.77 | 3.18 |
516 | 522 | 2.892215 | TCATGTGTTGTGCCATGACAAT | 59.108 | 40.909 | 3.55 | 0.00 | 41.77 | 2.71 |
517 | 523 | 3.321396 | TCATGTGTTGTGCCATGACAATT | 59.679 | 39.130 | 3.55 | 0.00 | 41.77 | 2.32 |
518 | 524 | 3.095102 | TGTGTTGTGCCATGACAATTG | 57.905 | 42.857 | 3.24 | 3.24 | 38.11 | 2.32 |
519 | 525 | 2.429971 | TGTGTTGTGCCATGACAATTGT | 59.570 | 40.909 | 11.78 | 11.78 | 38.11 | 2.71 |
520 | 526 | 3.118847 | TGTGTTGTGCCATGACAATTGTT | 60.119 | 39.130 | 13.36 | 0.00 | 38.11 | 2.83 |
521 | 527 | 3.870419 | GTGTTGTGCCATGACAATTGTTT | 59.130 | 39.130 | 13.36 | 0.59 | 38.11 | 2.83 |
522 | 528 | 5.046529 | GTGTTGTGCCATGACAATTGTTTA | 58.953 | 37.500 | 13.36 | 5.75 | 38.11 | 2.01 |
523 | 529 | 5.175491 | GTGTTGTGCCATGACAATTGTTTAG | 59.825 | 40.000 | 13.36 | 5.41 | 38.11 | 1.85 |
524 | 530 | 3.911868 | TGTGCCATGACAATTGTTTAGC | 58.088 | 40.909 | 13.36 | 13.55 | 0.00 | 3.09 |
525 | 531 | 3.573538 | TGTGCCATGACAATTGTTTAGCT | 59.426 | 39.130 | 13.36 | 0.00 | 0.00 | 3.32 |
526 | 532 | 4.168760 | GTGCCATGACAATTGTTTAGCTC | 58.831 | 43.478 | 13.36 | 10.50 | 0.00 | 4.09 |
527 | 533 | 3.119884 | TGCCATGACAATTGTTTAGCTCG | 60.120 | 43.478 | 13.36 | 0.00 | 0.00 | 5.03 |
528 | 534 | 3.126858 | GCCATGACAATTGTTTAGCTCGA | 59.873 | 43.478 | 13.36 | 0.00 | 0.00 | 4.04 |
529 | 535 | 4.379394 | GCCATGACAATTGTTTAGCTCGAA | 60.379 | 41.667 | 13.36 | 0.00 | 0.00 | 3.71 |
530 | 536 | 5.677091 | GCCATGACAATTGTTTAGCTCGAAT | 60.677 | 40.000 | 13.36 | 0.00 | 0.00 | 3.34 |
531 | 537 | 6.458206 | GCCATGACAATTGTTTAGCTCGAATA | 60.458 | 38.462 | 13.36 | 0.00 | 0.00 | 1.75 |
532 | 538 | 7.471721 | CCATGACAATTGTTTAGCTCGAATAA | 58.528 | 34.615 | 13.36 | 0.00 | 0.00 | 1.40 |
533 | 539 | 8.131100 | CCATGACAATTGTTTAGCTCGAATAAT | 58.869 | 33.333 | 13.36 | 0.00 | 0.00 | 1.28 |
534 | 540 | 8.950961 | CATGACAATTGTTTAGCTCGAATAATG | 58.049 | 33.333 | 13.36 | 0.00 | 0.00 | 1.90 |
535 | 541 | 7.471721 | TGACAATTGTTTAGCTCGAATAATGG | 58.528 | 34.615 | 13.36 | 0.00 | 0.00 | 3.16 |
536 | 542 | 6.265577 | ACAATTGTTTAGCTCGAATAATGGC | 58.734 | 36.000 | 4.92 | 0.00 | 0.00 | 4.40 |
537 | 543 | 4.530094 | TTGTTTAGCTCGAATAATGGCG | 57.470 | 40.909 | 0.00 | 0.00 | 0.00 | 5.69 |
538 | 544 | 2.286833 | TGTTTAGCTCGAATAATGGCGC | 59.713 | 45.455 | 0.00 | 0.00 | 0.00 | 6.53 |
539 | 545 | 2.526304 | TTAGCTCGAATAATGGCGCT | 57.474 | 45.000 | 7.64 | 0.00 | 0.00 | 5.92 |
540 | 546 | 2.526304 | TAGCTCGAATAATGGCGCTT | 57.474 | 45.000 | 7.64 | 0.00 | 0.00 | 4.68 |
541 | 547 | 0.940126 | AGCTCGAATAATGGCGCTTG | 59.060 | 50.000 | 7.64 | 0.00 | 0.00 | 4.01 |
542 | 548 | 0.040958 | GCTCGAATAATGGCGCTTGG | 60.041 | 55.000 | 7.64 | 0.00 | 0.00 | 3.61 |
543 | 549 | 0.588252 | CTCGAATAATGGCGCTTGGG | 59.412 | 55.000 | 7.64 | 0.00 | 0.00 | 4.12 |
544 | 550 | 1.008538 | CGAATAATGGCGCTTGGGC | 60.009 | 57.895 | 7.64 | 0.81 | 42.69 | 5.36 |
587 | 593 | 1.202302 | GCTATCGCACTCTGTAGCACA | 60.202 | 52.381 | 0.00 | 0.00 | 39.39 | 4.57 |
646 | 652 | 7.491048 | GGAAATTCTTTGTAAAGTTTGCTCACA | 59.509 | 33.333 | 5.27 | 0.00 | 37.31 | 3.58 |
652 | 658 | 7.870445 | TCTTTGTAAAGTTTGCTCACAGTTTTT | 59.130 | 29.630 | 5.27 | 0.00 | 37.31 | 1.94 |
653 | 659 | 7.575332 | TTGTAAAGTTTGCTCACAGTTTTTC | 57.425 | 32.000 | 5.27 | 0.00 | 0.00 | 2.29 |
654 | 660 | 6.919721 | TGTAAAGTTTGCTCACAGTTTTTCT | 58.080 | 32.000 | 5.27 | 0.00 | 0.00 | 2.52 |
655 | 661 | 8.046294 | TGTAAAGTTTGCTCACAGTTTTTCTA | 57.954 | 30.769 | 5.27 | 0.00 | 0.00 | 2.10 |
656 | 662 | 8.682710 | TGTAAAGTTTGCTCACAGTTTTTCTAT | 58.317 | 29.630 | 5.27 | 0.00 | 0.00 | 1.98 |
657 | 663 | 9.516314 | GTAAAGTTTGCTCACAGTTTTTCTATT | 57.484 | 29.630 | 0.00 | 0.00 | 0.00 | 1.73 |
659 | 665 | 9.435688 | AAAGTTTGCTCACAGTTTTTCTATTTT | 57.564 | 25.926 | 0.00 | 0.00 | 0.00 | 1.82 |
712 | 1056 | 6.040209 | ACTAAATACATAACGTGTGGGTGA | 57.960 | 37.500 | 6.22 | 0.00 | 42.24 | 4.02 |
952 | 1546 | 1.074566 | GATGCCCTCCCATTCCCTAAG | 59.925 | 57.143 | 0.00 | 0.00 | 0.00 | 2.18 |
994 | 1588 | 4.373116 | TCCGGCCAGAGCAACGAC | 62.373 | 66.667 | 2.24 | 0.00 | 42.56 | 4.34 |
1104 | 1698 | 0.105760 | ATGTGTTCAACCCAGGCCAA | 60.106 | 50.000 | 5.01 | 0.00 | 0.00 | 4.52 |
1143 | 1737 | 0.987081 | ACATCTCCCTGGAGCATGCT | 60.987 | 55.000 | 22.92 | 22.92 | 41.71 | 3.79 |
1158 | 1752 | 4.671569 | GCTCGCCTCCATAGCCGG | 62.672 | 72.222 | 0.00 | 0.00 | 0.00 | 6.13 |
1345 | 1939 | 4.416601 | AGGACCTCCCCTTCCCCG | 62.417 | 72.222 | 0.00 | 0.00 | 36.42 | 5.73 |
1391 | 1985 | 0.749454 | GCTGGCAGGTCAGTTATGGG | 60.749 | 60.000 | 17.64 | 0.00 | 37.12 | 4.00 |
1399 | 1993 | 2.158900 | AGGTCAGTTATGGGCAATCTCG | 60.159 | 50.000 | 0.00 | 0.00 | 0.00 | 4.04 |
1639 | 2233 | 1.065701 | CCACGGAGGAAGAGTACATCG | 59.934 | 57.143 | 0.00 | 0.00 | 41.22 | 3.84 |
1656 | 2250 | 3.701454 | GAGTGGTTCGAGAGGGCT | 58.299 | 61.111 | 0.00 | 0.00 | 0.00 | 5.19 |
1796 | 2390 | 5.016831 | CCCTTTGCAGGTACTTCCTTTAAT | 58.983 | 41.667 | 0.00 | 0.00 | 45.67 | 1.40 |
1832 | 2426 | 0.035739 | GCCCTTGAGTTGTAACGGGA | 59.964 | 55.000 | 8.93 | 0.00 | 33.46 | 5.14 |
1833 | 2427 | 1.944430 | GCCCTTGAGTTGTAACGGGAG | 60.944 | 57.143 | 8.93 | 0.45 | 33.46 | 4.30 |
1835 | 2429 | 2.236395 | CCCTTGAGTTGTAACGGGAGAT | 59.764 | 50.000 | 0.00 | 0.00 | 33.46 | 2.75 |
1871 | 2465 | 1.879380 | GTGCAAGCACACAATGTCCTA | 59.121 | 47.619 | 19.47 | 0.00 | 45.53 | 2.94 |
1908 | 2502 | 1.600485 | ACAAAAACGCTAGTTGTCCCG | 59.400 | 47.619 | 0.00 | 0.00 | 41.05 | 5.14 |
1910 | 2504 | 1.957668 | AAAACGCTAGTTGTCCCGTT | 58.042 | 45.000 | 0.00 | 0.00 | 44.66 | 4.44 |
1931 | 2525 | 1.603802 | CACCAAAGCGATCAACAGTGT | 59.396 | 47.619 | 0.00 | 0.00 | 0.00 | 3.55 |
1933 | 2527 | 2.687935 | ACCAAAGCGATCAACAGTGTTT | 59.312 | 40.909 | 5.57 | 0.00 | 0.00 | 2.83 |
1934 | 2528 | 3.130340 | ACCAAAGCGATCAACAGTGTTTT | 59.870 | 39.130 | 5.57 | 0.00 | 0.00 | 2.43 |
1935 | 2529 | 4.111916 | CCAAAGCGATCAACAGTGTTTTT | 58.888 | 39.130 | 5.57 | 0.40 | 0.00 | 1.94 |
1954 | 2548 | 4.734398 | TTTTTGCCCGCTCATCATATTT | 57.266 | 36.364 | 0.00 | 0.00 | 0.00 | 1.40 |
1955 | 2549 | 3.713858 | TTTGCCCGCTCATCATATTTG | 57.286 | 42.857 | 0.00 | 0.00 | 0.00 | 2.32 |
1959 | 2553 | 0.451628 | CCGCTCATCATATTTGCGCG | 60.452 | 55.000 | 0.00 | 0.00 | 44.44 | 6.86 |
1960 | 2554 | 1.056464 | CGCTCATCATATTTGCGCGC | 61.056 | 55.000 | 27.26 | 27.26 | 40.15 | 6.86 |
1963 | 2557 | 0.655208 | TCATCATATTTGCGCGCGTT | 59.345 | 45.000 | 32.35 | 15.88 | 0.00 | 4.84 |
1965 | 2559 | 0.655208 | ATCATATTTGCGCGCGTTGA | 59.345 | 45.000 | 32.35 | 22.37 | 0.00 | 3.18 |
1966 | 2560 | 0.655208 | TCATATTTGCGCGCGTTGAT | 59.345 | 45.000 | 32.35 | 22.60 | 0.00 | 2.57 |
1968 | 2562 | 0.316937 | ATATTTGCGCGCGTTGATGG | 60.317 | 50.000 | 32.35 | 0.92 | 0.00 | 3.51 |
1973 | 2567 | 2.860293 | CGCGCGTTGATGGACTTT | 59.140 | 55.556 | 24.19 | 0.00 | 0.00 | 2.66 |
1974 | 2568 | 1.509787 | CGCGCGTTGATGGACTTTG | 60.510 | 57.895 | 24.19 | 0.00 | 0.00 | 2.77 |
1977 | 2571 | 1.212751 | GCGTTGATGGACTTTGGCC | 59.787 | 57.895 | 0.00 | 0.00 | 0.00 | 5.36 |
1978 | 2572 | 1.883021 | CGTTGATGGACTTTGGCCC | 59.117 | 57.895 | 0.00 | 0.00 | 0.00 | 5.80 |
1979 | 2573 | 0.893270 | CGTTGATGGACTTTGGCCCA | 60.893 | 55.000 | 0.00 | 0.00 | 36.79 | 5.36 |
1980 | 2574 | 0.890683 | GTTGATGGACTTTGGCCCAG | 59.109 | 55.000 | 0.00 | 0.00 | 35.67 | 4.45 |
1981 | 2575 | 0.482446 | TTGATGGACTTTGGCCCAGT | 59.518 | 50.000 | 0.00 | 1.30 | 35.67 | 4.00 |
1983 | 2577 | 1.281867 | TGATGGACTTTGGCCCAGTAG | 59.718 | 52.381 | 0.00 | 0.00 | 35.67 | 2.57 |
1984 | 2578 | 0.034089 | ATGGACTTTGGCCCAGTAGC | 60.034 | 55.000 | 0.00 | 0.00 | 35.67 | 3.58 |
1985 | 2579 | 1.133809 | TGGACTTTGGCCCAGTAGCT | 61.134 | 55.000 | 0.00 | 0.00 | 0.00 | 3.32 |
2011 | 2921 | 1.369091 | GCAGGCATAGGTCCAACACG | 61.369 | 60.000 | 0.00 | 0.00 | 0.00 | 4.49 |
2029 | 2939 | 1.360192 | GGATATGTGGCCTTTGCGC | 59.640 | 57.895 | 3.32 | 0.00 | 38.85 | 6.09 |
2098 | 3008 | 4.019950 | GGTAGTTCTTTGGTGGCCTAGTTA | 60.020 | 45.833 | 3.32 | 0.00 | 0.00 | 2.24 |
2107 | 3017 | 1.757699 | GTGGCCTAGTTACTGAGGGAG | 59.242 | 57.143 | 3.32 | 0.00 | 33.04 | 4.30 |
2122 | 3032 | 1.077828 | AGGGAGGTCAGAGTGATGTGA | 59.922 | 52.381 | 0.00 | 0.00 | 0.00 | 3.58 |
2136 | 3046 | 0.326264 | ATGTGAGAGCTGTGGGGTTC | 59.674 | 55.000 | 0.00 | 0.00 | 0.00 | 3.62 |
2155 | 3065 | 5.221244 | GGGTTCAAATCCCATATGTGCTTAC | 60.221 | 44.000 | 1.24 | 0.00 | 44.05 | 2.34 |
2162 | 3073 | 7.961326 | AATCCCATATGTGCTTACTTTTTCT | 57.039 | 32.000 | 1.24 | 0.00 | 0.00 | 2.52 |
2164 | 3075 | 6.245408 | TCCCATATGTGCTTACTTTTTCTGT | 58.755 | 36.000 | 1.24 | 0.00 | 0.00 | 3.41 |
2188 | 3099 | 7.443879 | TGTTGCATTATTATTAGATCGAAGGCA | 59.556 | 33.333 | 0.00 | 0.00 | 32.44 | 4.75 |
2191 | 3102 | 7.443879 | TGCATTATTATTAGATCGAAGGCACAA | 59.556 | 33.333 | 0.00 | 0.00 | 29.67 | 3.33 |
2194 | 3105 | 8.958119 | TTATTATTAGATCGAAGGCACAAGTT | 57.042 | 30.769 | 0.00 | 0.00 | 0.00 | 2.66 |
2216 | 3127 | 3.041940 | CCGTTCGGCCACAGTGTC | 61.042 | 66.667 | 2.24 | 0.00 | 0.00 | 3.67 |
2244 | 3160 | 5.047566 | ACCACATATGAAATTCCGGATGA | 57.952 | 39.130 | 4.15 | 0.00 | 0.00 | 2.92 |
2246 | 3162 | 6.070656 | ACCACATATGAAATTCCGGATGATT | 58.929 | 36.000 | 4.15 | 0.00 | 0.00 | 2.57 |
2249 | 3165 | 7.596248 | CCACATATGAAATTCCGGATGATTTTC | 59.404 | 37.037 | 13.94 | 15.46 | 40.93 | 2.29 |
2260 | 3176 | 7.049799 | TCCGGATGATTTTCTTTTGTTTTCT | 57.950 | 32.000 | 0.00 | 0.00 | 0.00 | 2.52 |
2265 | 3181 | 7.807907 | GGATGATTTTCTTTTGTTTTCTAGCGA | 59.192 | 33.333 | 0.00 | 0.00 | 0.00 | 4.93 |
2268 | 3184 | 7.971168 | TGATTTTCTTTTGTTTTCTAGCGAACA | 59.029 | 29.630 | 6.64 | 6.64 | 34.22 | 3.18 |
2272 | 3188 | 5.583061 | TCTTTTGTTTTCTAGCGAACAGACA | 59.417 | 36.000 | 9.64 | 0.00 | 37.12 | 3.41 |
2276 | 3192 | 3.446310 | TTTCTAGCGAACAGACACACA | 57.554 | 42.857 | 0.00 | 0.00 | 0.00 | 3.72 |
2289 | 3205 | 7.375017 | CGAACAGACACACAAAAATTTAGTACC | 59.625 | 37.037 | 0.00 | 0.00 | 0.00 | 3.34 |
2302 | 3218 | 6.697641 | AATTTAGTACCACCTTGGAGAGAA | 57.302 | 37.500 | 0.00 | 0.00 | 40.96 | 2.87 |
2330 | 3246 | 9.849166 | AAAAATCTGTGAACTACGAAAGAAAAA | 57.151 | 25.926 | 0.00 | 0.00 | 0.00 | 1.94 |
2345 | 3261 | 9.581099 | ACGAAAGAAAAAGTGAAACATGTTAAT | 57.419 | 25.926 | 12.39 | 0.00 | 41.43 | 1.40 |
2355 | 3271 | 5.694458 | GTGAAACATGTTAATGGACCAAACC | 59.306 | 40.000 | 12.39 | 0.00 | 38.19 | 3.27 |
2399 | 3316 | 0.033781 | TACTAGCAAAACGCCCGTGT | 59.966 | 50.000 | 0.00 | 0.00 | 44.04 | 4.49 |
2401 | 3318 | 1.225376 | CTAGCAAAACGCCCGTGTGA | 61.225 | 55.000 | 8.42 | 0.00 | 44.04 | 3.58 |
2415 | 3332 | 1.398451 | CGTGTGATGCAACGGAAGAAC | 60.398 | 52.381 | 0.67 | 0.00 | 0.00 | 3.01 |
2428 | 3348 | 8.300286 | TGCAACGGAAGAACAAAAATCATAATA | 58.700 | 29.630 | 0.00 | 0.00 | 0.00 | 0.98 |
2448 | 3368 | 5.789643 | ATATTTAATGGCCATGACCACAC | 57.210 | 39.130 | 21.63 | 0.00 | 44.17 | 3.82 |
2455 | 3375 | 0.242017 | GCCATGACCACACTTTGCTC | 59.758 | 55.000 | 0.00 | 0.00 | 0.00 | 4.26 |
2462 | 3382 | 1.143684 | ACCACACTTTGCTCCATCACT | 59.856 | 47.619 | 0.00 | 0.00 | 0.00 | 3.41 |
2465 | 3385 | 2.225019 | CACACTTTGCTCCATCACTGAC | 59.775 | 50.000 | 0.00 | 0.00 | 0.00 | 3.51 |
2477 | 3397 | 6.396829 | TCCATCACTGACATACACTATCAG | 57.603 | 41.667 | 0.00 | 0.00 | 44.49 | 2.90 |
2540 | 3460 | 9.246670 | TCATGACCATTTTCTTAAACTCATGAT | 57.753 | 29.630 | 0.00 | 0.00 | 37.26 | 2.45 |
2558 | 3478 | 9.438228 | ACTCATGATCATATCTGAAATCATGAC | 57.562 | 33.333 | 21.53 | 0.00 | 44.87 | 3.06 |
2575 | 3498 | 7.816945 | ATCATGACCATTTTTCAAATTCGAC | 57.183 | 32.000 | 0.00 | 0.00 | 0.00 | 4.20 |
2584 | 3507 | 9.300441 | CCATTTTTCAAATTCGACATTTTTACG | 57.700 | 29.630 | 0.00 | 0.00 | 0.00 | 3.18 |
2591 | 3514 | 8.907685 | TCAAATTCGACATTTTTACGGATTTTC | 58.092 | 29.630 | 0.00 | 0.00 | 41.30 | 2.29 |
2592 | 3515 | 8.695284 | CAAATTCGACATTTTTACGGATTTTCA | 58.305 | 29.630 | 0.00 | 0.00 | 41.30 | 2.69 |
2593 | 3516 | 8.447787 | AATTCGACATTTTTACGGATTTTCAG | 57.552 | 30.769 | 0.00 | 0.00 | 32.38 | 3.02 |
2606 | 3548 | 6.578023 | ACGGATTTTCAGACATTTTCCAAAA | 58.422 | 32.000 | 0.00 | 0.00 | 0.00 | 2.44 |
2714 | 3658 | 4.113354 | GGCGAACATTTCTAGAATCGACT | 58.887 | 43.478 | 23.61 | 3.11 | 35.53 | 4.18 |
2716 | 3660 | 5.747197 | GGCGAACATTTCTAGAATCGACTAA | 59.253 | 40.000 | 23.61 | 2.32 | 35.53 | 2.24 |
2717 | 3661 | 6.291690 | GGCGAACATTTCTAGAATCGACTAAC | 60.292 | 42.308 | 23.61 | 9.92 | 35.53 | 2.34 |
2718 | 3662 | 6.252869 | GCGAACATTTCTAGAATCGACTAACA | 59.747 | 38.462 | 23.61 | 0.98 | 32.38 | 2.41 |
2901 | 4030 | 7.397970 | AGATTTGTTAATGCACAAACGTTTTG | 58.602 | 30.769 | 11.66 | 13.66 | 46.76 | 2.44 |
2949 | 4081 | 7.793927 | TTTCCCCAACATATGTTTTCAAAAC | 57.206 | 32.000 | 18.50 | 6.02 | 35.83 | 2.43 |
2952 | 4084 | 5.700373 | CCCCAACATATGTTTTCAAAACTGG | 59.300 | 40.000 | 18.50 | 13.36 | 35.83 | 4.00 |
2961 | 4093 | 6.734104 | TGTTTTCAAAACTGGGAACATTTG | 57.266 | 33.333 | 14.10 | 0.00 | 40.19 | 2.32 |
2995 | 4159 | 8.563732 | TGTGAACATTTTAAATCTGAATCGACA | 58.436 | 29.630 | 0.00 | 0.00 | 0.00 | 4.35 |
3162 | 4396 | 4.216687 | CCCAAAAAGGCACGTTGTATCTTA | 59.783 | 41.667 | 0.00 | 0.00 | 35.39 | 2.10 |
3630 | 4974 | 5.883503 | AATTTGGCATCGCATCAAATTTT | 57.116 | 30.435 | 8.96 | 0.00 | 43.99 | 1.82 |
3659 | 5003 | 6.830324 | TGGTTAAGCAGATCTAGCAAATTCAT | 59.170 | 34.615 | 16.20 | 0.00 | 0.00 | 2.57 |
3660 | 5004 | 7.137426 | GGTTAAGCAGATCTAGCAAATTCATG | 58.863 | 38.462 | 16.20 | 0.00 | 0.00 | 3.07 |
3664 | 5008 | 7.870509 | AGCAGATCTAGCAAATTCATGTTTA | 57.129 | 32.000 | 16.20 | 0.00 | 0.00 | 2.01 |
3779 | 5123 | 2.041081 | TCGGTTCCTCATTGGGACAATT | 59.959 | 45.455 | 0.00 | 0.00 | 46.49 | 2.32 |
3782 | 5126 | 3.578282 | GGTTCCTCATTGGGACAATTTGT | 59.422 | 43.478 | 0.63 | 0.63 | 46.49 | 2.83 |
3869 | 5213 | 4.090090 | GGCCTATCTAACTGAGGATGCTA | 58.910 | 47.826 | 0.00 | 0.00 | 31.45 | 3.49 |
3891 | 5235 | 1.558756 | CTGGCAGGAGGAGACAAGATT | 59.441 | 52.381 | 6.61 | 0.00 | 0.00 | 2.40 |
3914 | 5258 | 7.609097 | TTGGAGTCAATATCTGATCTAAGCT | 57.391 | 36.000 | 0.00 | 0.00 | 36.14 | 3.74 |
3926 | 5270 | 6.946340 | TCTGATCTAAGCTGTGAAAATACCA | 58.054 | 36.000 | 0.00 | 0.00 | 0.00 | 3.25 |
3930 | 5274 | 7.665559 | TGATCTAAGCTGTGAAAATACCACTTT | 59.334 | 33.333 | 0.00 | 0.00 | 35.66 | 2.66 |
3944 | 5288 | 7.769272 | AATACCACTTTTGTTTCATGTTGTG | 57.231 | 32.000 | 0.00 | 0.00 | 0.00 | 3.33 |
3947 | 5291 | 5.637387 | ACCACTTTTGTTTCATGTTGTGTTC | 59.363 | 36.000 | 0.00 | 0.00 | 0.00 | 3.18 |
3952 | 5296 | 7.754924 | ACTTTTGTTTCATGTTGTGTTCTGTAG | 59.245 | 33.333 | 0.00 | 0.00 | 0.00 | 2.74 |
3958 | 5302 | 8.717821 | GTTTCATGTTGTGTTCTGTAGCTATAA | 58.282 | 33.333 | 0.00 | 0.00 | 0.00 | 0.98 |
3969 | 5313 | 7.865889 | TGTTCTGTAGCTATAAATATGTGGACG | 59.134 | 37.037 | 0.00 | 0.00 | 0.00 | 4.79 |
3970 | 5314 | 6.387465 | TCTGTAGCTATAAATATGTGGACGC | 58.613 | 40.000 | 0.00 | 0.00 | 0.00 | 5.19 |
3971 | 5315 | 6.015772 | TCTGTAGCTATAAATATGTGGACGCA | 60.016 | 38.462 | 0.00 | 0.00 | 0.00 | 5.24 |
3972 | 5316 | 5.924254 | TGTAGCTATAAATATGTGGACGCAC | 59.076 | 40.000 | 0.00 | 0.00 | 0.00 | 5.34 |
3973 | 5317 | 3.987868 | AGCTATAAATATGTGGACGCACG | 59.012 | 43.478 | 0.00 | 0.00 | 0.00 | 5.34 |
3992 | 5349 | 1.482278 | GTGCCGTCAGAAGATCGATC | 58.518 | 55.000 | 17.91 | 17.91 | 0.00 | 3.69 |
3993 | 5350 | 0.029433 | TGCCGTCAGAAGATCGATCG | 59.971 | 55.000 | 19.33 | 9.36 | 0.00 | 3.69 |
3994 | 5351 | 0.661780 | GCCGTCAGAAGATCGATCGG | 60.662 | 60.000 | 19.33 | 16.10 | 39.52 | 4.18 |
3999 | 5356 | 3.304257 | GTCAGAAGATCGATCGGTCATG | 58.696 | 50.000 | 28.86 | 22.35 | 0.00 | 3.07 |
4004 | 5361 | 0.034059 | GATCGATCGGTCATGGGCTT | 59.966 | 55.000 | 23.20 | 0.00 | 0.00 | 4.35 |
4005 | 5362 | 0.034059 | ATCGATCGGTCATGGGCTTC | 59.966 | 55.000 | 16.41 | 0.00 | 0.00 | 3.86 |
4006 | 5363 | 1.143838 | CGATCGGTCATGGGCTTCA | 59.856 | 57.895 | 7.38 | 0.00 | 0.00 | 3.02 |
4021 | 5378 | 2.031682 | GGCTTCATGCATCAACCGATAC | 60.032 | 50.000 | 0.00 | 0.00 | 45.15 | 2.24 |
4030 | 5387 | 1.847328 | TCAACCGATACAGAGGCAGA | 58.153 | 50.000 | 0.00 | 0.00 | 0.00 | 4.26 |
4038 | 5395 | 1.697284 | TACAGAGGCAGATGCTCGAT | 58.303 | 50.000 | 4.59 | 0.00 | 41.70 | 3.59 |
4042 | 5399 | 0.938637 | GAGGCAGATGCTCGATGACG | 60.939 | 60.000 | 4.59 | 0.00 | 41.70 | 4.35 |
4052 | 5409 | 1.350193 | CTCGATGACGTGGGAAACTG | 58.650 | 55.000 | 0.00 | 0.00 | 40.69 | 3.16 |
4058 | 5415 | 2.489971 | TGACGTGGGAAACTGATTGAC | 58.510 | 47.619 | 0.00 | 0.00 | 0.00 | 3.18 |
4076 | 5433 | 2.147150 | GACCAGACTTGTTTCCTGCTC | 58.853 | 52.381 | 0.00 | 0.00 | 0.00 | 4.26 |
4106 | 5463 | 0.393077 | CTTCGACTTGTGTGGACCCT | 59.607 | 55.000 | 0.00 | 0.00 | 30.75 | 4.34 |
4107 | 5464 | 0.391597 | TTCGACTTGTGTGGACCCTC | 59.608 | 55.000 | 0.00 | 0.00 | 30.75 | 4.30 |
4108 | 5465 | 1.004918 | CGACTTGTGTGGACCCTCC | 60.005 | 63.158 | 0.00 | 0.00 | 36.96 | 4.30 |
4109 | 5466 | 1.375326 | GACTTGTGTGGACCCTCCC | 59.625 | 63.158 | 0.00 | 0.00 | 35.03 | 4.30 |
4136 | 5493 | 2.964209 | AGGTCCATCATCTCCGTGTAT | 58.036 | 47.619 | 0.00 | 0.00 | 0.00 | 2.29 |
4172 | 5529 | 7.152645 | AGTAGAAGTCATTCGTTGTAACACAT | 58.847 | 34.615 | 0.00 | 0.00 | 40.58 | 3.21 |
4177 | 5534 | 6.452242 | AGTCATTCGTTGTAACACATAGTGA | 58.548 | 36.000 | 3.88 | 0.00 | 36.96 | 3.41 |
4200 | 5557 | 9.817809 | GTGAGTATATAAACAATGGAGAAGTCA | 57.182 | 33.333 | 0.00 | 0.00 | 0.00 | 3.41 |
4217 | 5574 | 4.955925 | AGTCAGTCACATCTTCTCTACG | 57.044 | 45.455 | 0.00 | 0.00 | 0.00 | 3.51 |
4229 | 5586 | 9.999009 | CACATCTTCTCTACGTATTAAAGTACA | 57.001 | 33.333 | 0.00 | 0.00 | 0.00 | 2.90 |
4248 | 5605 | 4.404507 | ACATAAACGTGTGCTCATTGTC | 57.595 | 40.909 | 0.00 | 0.00 | 0.00 | 3.18 |
4250 | 5607 | 4.455533 | ACATAAACGTGTGCTCATTGTCAT | 59.544 | 37.500 | 0.00 | 0.00 | 0.00 | 3.06 |
4257 | 5614 | 2.885894 | TGTGCTCATTGTCATGCAAAGA | 59.114 | 40.909 | 6.65 | 7.01 | 40.91 | 2.52 |
4278 | 5635 | 1.567537 | CGCAACATCGAAACCACGT | 59.432 | 52.632 | 0.00 | 0.00 | 34.70 | 4.49 |
4290 | 5647 | 3.001127 | CGAAACCACGTCCGTCTTTTAAA | 59.999 | 43.478 | 0.00 | 0.00 | 0.00 | 1.52 |
4302 | 5663 | 7.470079 | GTCCGTCTTTTAAAACTTTGAAGTCT | 58.530 | 34.615 | 0.00 | 0.00 | 38.57 | 3.24 |
4360 | 5721 | 8.474710 | TCTAATGTCAATAGTTAGGTACTCCC | 57.525 | 38.462 | 0.00 | 0.00 | 41.75 | 4.30 |
4362 | 5723 | 6.980416 | ATGTCAATAGTTAGGTACTCCCTC | 57.020 | 41.667 | 0.00 | 0.00 | 44.81 | 4.30 |
4363 | 5724 | 5.206587 | TGTCAATAGTTAGGTACTCCCTCC | 58.793 | 45.833 | 0.00 | 0.00 | 44.81 | 4.30 |
4364 | 5725 | 4.277921 | GTCAATAGTTAGGTACTCCCTCCG | 59.722 | 50.000 | 0.00 | 0.00 | 44.81 | 4.63 |
4365 | 5726 | 4.079558 | TCAATAGTTAGGTACTCCCTCCGT | 60.080 | 45.833 | 0.00 | 0.00 | 44.81 | 4.69 |
4366 | 5727 | 2.915657 | AGTTAGGTACTCCCTCCGTT | 57.084 | 50.000 | 0.00 | 0.00 | 44.81 | 4.44 |
4367 | 5728 | 3.181393 | AGTTAGGTACTCCCTCCGTTT | 57.819 | 47.619 | 0.00 | 0.00 | 44.81 | 3.60 |
4368 | 5729 | 3.095332 | AGTTAGGTACTCCCTCCGTTTC | 58.905 | 50.000 | 0.00 | 0.00 | 44.81 | 2.78 |
4369 | 5730 | 2.827921 | GTTAGGTACTCCCTCCGTTTCA | 59.172 | 50.000 | 0.00 | 0.00 | 44.81 | 2.69 |
4370 | 5731 | 2.019807 | AGGTACTCCCTCCGTTTCAA | 57.980 | 50.000 | 0.00 | 0.00 | 40.71 | 2.69 |
4371 | 5732 | 2.332117 | AGGTACTCCCTCCGTTTCAAA | 58.668 | 47.619 | 0.00 | 0.00 | 40.71 | 2.69 |
4372 | 5733 | 2.910977 | AGGTACTCCCTCCGTTTCAAAT | 59.089 | 45.455 | 0.00 | 0.00 | 40.71 | 2.32 |
4373 | 5734 | 3.329814 | AGGTACTCCCTCCGTTTCAAATT | 59.670 | 43.478 | 0.00 | 0.00 | 40.71 | 1.82 |
4374 | 5735 | 4.533311 | AGGTACTCCCTCCGTTTCAAATTA | 59.467 | 41.667 | 0.00 | 0.00 | 40.71 | 1.40 |
4375 | 5736 | 4.633126 | GGTACTCCCTCCGTTTCAAATTAC | 59.367 | 45.833 | 0.00 | 0.00 | 0.00 | 1.89 |
4376 | 5737 | 4.635699 | ACTCCCTCCGTTTCAAATTACT | 57.364 | 40.909 | 0.00 | 0.00 | 0.00 | 2.24 |
4377 | 5738 | 4.576879 | ACTCCCTCCGTTTCAAATTACTC | 58.423 | 43.478 | 0.00 | 0.00 | 0.00 | 2.59 |
4378 | 5739 | 4.041198 | ACTCCCTCCGTTTCAAATTACTCA | 59.959 | 41.667 | 0.00 | 0.00 | 0.00 | 3.41 |
4379 | 5740 | 5.174037 | TCCCTCCGTTTCAAATTACTCAT | 57.826 | 39.130 | 0.00 | 0.00 | 0.00 | 2.90 |
4380 | 5741 | 5.183228 | TCCCTCCGTTTCAAATTACTCATC | 58.817 | 41.667 | 0.00 | 0.00 | 0.00 | 2.92 |
4381 | 5742 | 4.034048 | CCCTCCGTTTCAAATTACTCATCG | 59.966 | 45.833 | 0.00 | 0.00 | 0.00 | 3.84 |
4382 | 5743 | 4.630069 | CCTCCGTTTCAAATTACTCATCGT | 59.370 | 41.667 | 0.00 | 0.00 | 0.00 | 3.73 |
4383 | 5744 | 5.445939 | CCTCCGTTTCAAATTACTCATCGTG | 60.446 | 44.000 | 0.00 | 0.00 | 0.00 | 4.35 |
4384 | 5745 | 4.390603 | TCCGTTTCAAATTACTCATCGTGG | 59.609 | 41.667 | 0.00 | 0.00 | 0.00 | 4.94 |
4385 | 5746 | 4.153475 | CCGTTTCAAATTACTCATCGTGGT | 59.847 | 41.667 | 0.00 | 0.00 | 0.00 | 4.16 |
4386 | 5747 | 5.334569 | CCGTTTCAAATTACTCATCGTGGTT | 60.335 | 40.000 | 0.00 | 0.00 | 0.00 | 3.67 |
4387 | 5748 | 6.140110 | CGTTTCAAATTACTCATCGTGGTTT | 58.860 | 36.000 | 0.00 | 0.00 | 0.00 | 3.27 |
4388 | 5749 | 6.635239 | CGTTTCAAATTACTCATCGTGGTTTT | 59.365 | 34.615 | 0.00 | 0.00 | 0.00 | 2.43 |
4389 | 5750 | 7.799447 | CGTTTCAAATTACTCATCGTGGTTTTA | 59.201 | 33.333 | 0.00 | 0.00 | 0.00 | 1.52 |
4390 | 5751 | 9.113876 | GTTTCAAATTACTCATCGTGGTTTTAG | 57.886 | 33.333 | 0.00 | 0.00 | 0.00 | 1.85 |
4391 | 5752 | 7.972832 | TCAAATTACTCATCGTGGTTTTAGT | 57.027 | 32.000 | 0.00 | 0.00 | 0.00 | 2.24 |
4392 | 5753 | 8.385898 | TCAAATTACTCATCGTGGTTTTAGTT | 57.614 | 30.769 | 0.00 | 0.00 | 0.00 | 2.24 |
4393 | 5754 | 8.500773 | TCAAATTACTCATCGTGGTTTTAGTTC | 58.499 | 33.333 | 0.00 | 0.00 | 0.00 | 3.01 |
4394 | 5755 | 7.972832 | AATTACTCATCGTGGTTTTAGTTCA | 57.027 | 32.000 | 0.00 | 0.00 | 0.00 | 3.18 |
4395 | 5756 | 7.972832 | ATTACTCATCGTGGTTTTAGTTCAA | 57.027 | 32.000 | 0.00 | 0.00 | 0.00 | 2.69 |
4396 | 5757 | 7.789273 | TTACTCATCGTGGTTTTAGTTCAAA | 57.211 | 32.000 | 0.00 | 0.00 | 0.00 | 2.69 |
4397 | 5758 | 6.877611 | ACTCATCGTGGTTTTAGTTCAAAT | 57.122 | 33.333 | 0.00 | 0.00 | 0.00 | 2.32 |
4398 | 5759 | 7.972832 | ACTCATCGTGGTTTTAGTTCAAATA | 57.027 | 32.000 | 0.00 | 0.00 | 0.00 | 1.40 |
4399 | 5760 | 8.561738 | ACTCATCGTGGTTTTAGTTCAAATAT | 57.438 | 30.769 | 0.00 | 0.00 | 0.00 | 1.28 |
4400 | 5761 | 8.450964 | ACTCATCGTGGTTTTAGTTCAAATATG | 58.549 | 33.333 | 0.00 | 0.00 | 0.00 | 1.78 |
4401 | 5762 | 8.554835 | TCATCGTGGTTTTAGTTCAAATATGA | 57.445 | 30.769 | 0.00 | 0.00 | 0.00 | 2.15 |
4402 | 5763 | 9.004717 | TCATCGTGGTTTTAGTTCAAATATGAA | 57.995 | 29.630 | 0.00 | 0.00 | 43.18 | 2.57 |
4426 | 5787 | 9.968743 | GAACTAAAACTACGATGAGTAATTTGG | 57.031 | 33.333 | 0.00 | 0.00 | 35.28 | 3.28 |
4427 | 5788 | 9.715121 | AACTAAAACTACGATGAGTAATTTGGA | 57.285 | 29.630 | 0.00 | 0.00 | 35.28 | 3.53 |
4428 | 5789 | 9.715121 | ACTAAAACTACGATGAGTAATTTGGAA | 57.285 | 29.630 | 0.00 | 0.00 | 35.28 | 3.53 |
4429 | 5790 | 9.968743 | CTAAAACTACGATGAGTAATTTGGAAC | 57.031 | 33.333 | 0.00 | 0.00 | 35.28 | 3.62 |
4430 | 5791 | 6.642683 | AACTACGATGAGTAATTTGGAACG | 57.357 | 37.500 | 0.00 | 0.00 | 34.45 | 3.95 |
4431 | 5792 | 5.107133 | ACTACGATGAGTAATTTGGAACGG | 58.893 | 41.667 | 0.00 | 0.00 | 34.45 | 4.44 |
4432 | 5793 | 4.196626 | ACGATGAGTAATTTGGAACGGA | 57.803 | 40.909 | 0.00 | 0.00 | 0.00 | 4.69 |
4433 | 5794 | 4.181578 | ACGATGAGTAATTTGGAACGGAG | 58.818 | 43.478 | 0.00 | 0.00 | 0.00 | 4.63 |
4434 | 5795 | 3.555956 | CGATGAGTAATTTGGAACGGAGG | 59.444 | 47.826 | 0.00 | 0.00 | 0.00 | 4.30 |
4435 | 5796 | 3.343941 | TGAGTAATTTGGAACGGAGGG | 57.656 | 47.619 | 0.00 | 0.00 | 0.00 | 4.30 |
4436 | 5797 | 2.907696 | TGAGTAATTTGGAACGGAGGGA | 59.092 | 45.455 | 0.00 | 0.00 | 0.00 | 4.20 |
4440 | 5801 | 3.345508 | AATTTGGAACGGAGGGAGTAC | 57.654 | 47.619 | 0.00 | 0.00 | 0.00 | 2.73 |
4529 | 5893 | 8.854614 | AATTGGATAGTGCTATTACCATTCTC | 57.145 | 34.615 | 0.00 | 0.00 | 0.00 | 2.87 |
4530 | 5894 | 6.360370 | TGGATAGTGCTATTACCATTCTCC | 57.640 | 41.667 | 0.00 | 0.00 | 0.00 | 3.71 |
4540 | 5904 | 9.034800 | TGCTATTACCATTCTCCAAAGAAAAAT | 57.965 | 29.630 | 0.00 | 0.00 | 44.49 | 1.82 |
4544 | 5908 | 4.347583 | ACCATTCTCCAAAGAAAAATGCCA | 59.652 | 37.500 | 0.00 | 0.00 | 44.49 | 4.92 |
4548 | 5912 | 4.897140 | TCTCCAAAGAAAAATGCCATTGG | 58.103 | 39.130 | 0.00 | 0.00 | 38.88 | 3.16 |
4789 | 6155 | 8.537049 | TGAAGTTTGATTAATGCAGGATTTTG | 57.463 | 30.769 | 0.00 | 0.00 | 0.00 | 2.44 |
4810 | 6176 | 4.030913 | TGTGGAATAGTAGAGGTCTTGGG | 58.969 | 47.826 | 0.00 | 0.00 | 0.00 | 4.12 |
4815 | 6181 | 4.611564 | ATAGTAGAGGTCTTGGGTGACT | 57.388 | 45.455 | 0.00 | 0.00 | 37.16 | 3.41 |
4852 | 6218 | 6.091305 | CGTTTTCTCTCAATTATGCAGTGAGA | 59.909 | 38.462 | 16.68 | 16.68 | 44.20 | 3.27 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
7 | 8 | 4.392921 | AGGGATAGTCGACAAATGTCTG | 57.607 | 45.455 | 19.50 | 5.71 | 42.66 | 3.51 |
74 | 76 | 6.015180 | ACACCATTAACTCATGCTGAATTTGT | 60.015 | 34.615 | 0.00 | 0.00 | 0.00 | 2.83 |
284 | 290 | 5.598417 | TGAGGGGGATATATCACATGATACG | 59.402 | 44.000 | 16.75 | 0.00 | 39.57 | 3.06 |
316 | 322 | 0.321919 | CATGAGGAGGTGGGTGTGTG | 60.322 | 60.000 | 0.00 | 0.00 | 0.00 | 3.82 |
317 | 323 | 0.768221 | ACATGAGGAGGTGGGTGTGT | 60.768 | 55.000 | 0.00 | 0.00 | 0.00 | 3.72 |
398 | 404 | 2.224426 | TGTATGTTGGCTTTGAGACGGT | 60.224 | 45.455 | 0.00 | 0.00 | 0.00 | 4.83 |
399 | 405 | 2.422597 | TGTATGTTGGCTTTGAGACGG | 58.577 | 47.619 | 0.00 | 0.00 | 0.00 | 4.79 |
424 | 430 | 4.056125 | GGCTTGTGCTTTCCGCCC | 62.056 | 66.667 | 0.00 | 0.00 | 39.59 | 6.13 |
425 | 431 | 4.404654 | CGGCTTGTGCTTTCCGCC | 62.405 | 66.667 | 0.00 | 0.00 | 39.59 | 6.13 |
455 | 461 | 1.473610 | CGTGTGGGGTGTTAGTTGTGA | 60.474 | 52.381 | 0.00 | 0.00 | 0.00 | 3.58 |
458 | 464 | 1.223187 | GACGTGTGGGGTGTTAGTTG | 58.777 | 55.000 | 0.00 | 0.00 | 0.00 | 3.16 |
459 | 465 | 0.831966 | TGACGTGTGGGGTGTTAGTT | 59.168 | 50.000 | 0.00 | 0.00 | 0.00 | 2.24 |
460 | 466 | 0.391597 | CTGACGTGTGGGGTGTTAGT | 59.608 | 55.000 | 0.00 | 0.00 | 0.00 | 2.24 |
461 | 467 | 0.320421 | CCTGACGTGTGGGGTGTTAG | 60.320 | 60.000 | 0.00 | 0.00 | 0.00 | 2.34 |
462 | 468 | 1.049855 | ACCTGACGTGTGGGGTGTTA | 61.050 | 55.000 | 0.00 | 0.00 | 0.00 | 2.41 |
463 | 469 | 2.319890 | GACCTGACGTGTGGGGTGTT | 62.320 | 60.000 | 0.00 | 0.00 | 31.60 | 3.32 |
464 | 470 | 2.766651 | ACCTGACGTGTGGGGTGT | 60.767 | 61.111 | 0.00 | 0.00 | 0.00 | 4.16 |
465 | 471 | 2.030562 | GACCTGACGTGTGGGGTG | 59.969 | 66.667 | 0.00 | 0.00 | 31.60 | 4.61 |
466 | 472 | 3.239253 | GGACCTGACGTGTGGGGT | 61.239 | 66.667 | 0.00 | 0.00 | 34.45 | 4.95 |
467 | 473 | 2.923035 | AGGACCTGACGTGTGGGG | 60.923 | 66.667 | 0.00 | 0.00 | 0.00 | 4.96 |
468 | 474 | 1.544825 | ATGAGGACCTGACGTGTGGG | 61.545 | 60.000 | 0.00 | 0.00 | 0.00 | 4.61 |
469 | 475 | 0.108615 | GATGAGGACCTGACGTGTGG | 60.109 | 60.000 | 0.00 | 0.00 | 0.00 | 4.17 |
470 | 476 | 0.603065 | TGATGAGGACCTGACGTGTG | 59.397 | 55.000 | 0.00 | 0.00 | 0.00 | 3.82 |
471 | 477 | 1.338107 | TTGATGAGGACCTGACGTGT | 58.662 | 50.000 | 0.00 | 0.00 | 0.00 | 4.49 |
472 | 478 | 2.455674 | TTTGATGAGGACCTGACGTG | 57.544 | 50.000 | 0.00 | 0.00 | 0.00 | 4.49 |
473 | 479 | 3.261897 | AGAATTTGATGAGGACCTGACGT | 59.738 | 43.478 | 0.00 | 0.00 | 0.00 | 4.34 |
474 | 480 | 3.866651 | AGAATTTGATGAGGACCTGACG | 58.133 | 45.455 | 0.00 | 0.00 | 0.00 | 4.35 |
475 | 481 | 4.836825 | TGAGAATTTGATGAGGACCTGAC | 58.163 | 43.478 | 0.00 | 0.00 | 0.00 | 3.51 |
476 | 482 | 5.045359 | ACATGAGAATTTGATGAGGACCTGA | 60.045 | 40.000 | 0.00 | 0.00 | 0.00 | 3.86 |
477 | 483 | 5.066117 | CACATGAGAATTTGATGAGGACCTG | 59.934 | 44.000 | 0.00 | 0.00 | 0.00 | 4.00 |
478 | 484 | 5.191426 | CACATGAGAATTTGATGAGGACCT | 58.809 | 41.667 | 0.00 | 0.00 | 0.00 | 3.85 |
479 | 485 | 4.946157 | ACACATGAGAATTTGATGAGGACC | 59.054 | 41.667 | 0.00 | 0.00 | 0.00 | 4.46 |
480 | 486 | 6.072286 | ACAACACATGAGAATTTGATGAGGAC | 60.072 | 38.462 | 0.00 | 0.00 | 0.00 | 3.85 |
481 | 487 | 6.005823 | ACAACACATGAGAATTTGATGAGGA | 58.994 | 36.000 | 0.00 | 0.00 | 0.00 | 3.71 |
482 | 488 | 6.090783 | CACAACACATGAGAATTTGATGAGG | 58.909 | 40.000 | 0.00 | 0.00 | 0.00 | 3.86 |
483 | 489 | 5.571741 | GCACAACACATGAGAATTTGATGAG | 59.428 | 40.000 | 0.00 | 0.00 | 0.00 | 2.90 |
484 | 490 | 5.463286 | GCACAACACATGAGAATTTGATGA | 58.537 | 37.500 | 0.00 | 0.00 | 0.00 | 2.92 |
485 | 491 | 4.624024 | GGCACAACACATGAGAATTTGATG | 59.376 | 41.667 | 0.00 | 0.00 | 0.00 | 3.07 |
486 | 492 | 4.281435 | TGGCACAACACATGAGAATTTGAT | 59.719 | 37.500 | 0.00 | 0.00 | 31.92 | 2.57 |
487 | 493 | 3.635836 | TGGCACAACACATGAGAATTTGA | 59.364 | 39.130 | 0.00 | 0.00 | 31.92 | 2.69 |
488 | 494 | 3.979948 | TGGCACAACACATGAGAATTTG | 58.020 | 40.909 | 0.00 | 0.00 | 31.92 | 2.32 |
489 | 495 | 4.281435 | TCATGGCACAACACATGAGAATTT | 59.719 | 37.500 | 0.00 | 0.00 | 46.05 | 1.82 |
490 | 496 | 3.827876 | TCATGGCACAACACATGAGAATT | 59.172 | 39.130 | 0.00 | 0.00 | 46.05 | 2.17 |
491 | 497 | 3.423749 | TCATGGCACAACACATGAGAAT | 58.576 | 40.909 | 0.00 | 0.00 | 46.05 | 2.40 |
492 | 498 | 2.861274 | TCATGGCACAACACATGAGAA | 58.139 | 42.857 | 0.00 | 0.00 | 46.05 | 2.87 |
493 | 499 | 2.565046 | TCATGGCACAACACATGAGA | 57.435 | 45.000 | 0.00 | 0.00 | 46.05 | 3.27 |
504 | 510 | 4.168760 | GAGCTAAACAATTGTCATGGCAC | 58.831 | 43.478 | 24.58 | 18.37 | 0.00 | 5.01 |
505 | 511 | 3.119884 | CGAGCTAAACAATTGTCATGGCA | 60.120 | 43.478 | 24.58 | 0.00 | 0.00 | 4.92 |
506 | 512 | 3.126858 | TCGAGCTAAACAATTGTCATGGC | 59.873 | 43.478 | 12.39 | 16.48 | 0.00 | 4.40 |
507 | 513 | 4.944962 | TCGAGCTAAACAATTGTCATGG | 57.055 | 40.909 | 12.39 | 7.39 | 0.00 | 3.66 |
508 | 514 | 8.950961 | CATTATTCGAGCTAAACAATTGTCATG | 58.049 | 33.333 | 12.39 | 5.97 | 0.00 | 3.07 |
509 | 515 | 8.131100 | CCATTATTCGAGCTAAACAATTGTCAT | 58.869 | 33.333 | 12.39 | 6.81 | 0.00 | 3.06 |
510 | 516 | 7.471721 | CCATTATTCGAGCTAAACAATTGTCA | 58.528 | 34.615 | 12.39 | 2.04 | 0.00 | 3.58 |
511 | 517 | 6.414987 | GCCATTATTCGAGCTAAACAATTGTC | 59.585 | 38.462 | 12.39 | 0.00 | 0.00 | 3.18 |
512 | 518 | 6.265577 | GCCATTATTCGAGCTAAACAATTGT | 58.734 | 36.000 | 4.92 | 4.92 | 0.00 | 2.71 |
513 | 519 | 5.396362 | CGCCATTATTCGAGCTAAACAATTG | 59.604 | 40.000 | 3.24 | 3.24 | 0.00 | 2.32 |
514 | 520 | 5.510671 | CGCCATTATTCGAGCTAAACAATT | 58.489 | 37.500 | 0.00 | 0.00 | 0.00 | 2.32 |
515 | 521 | 4.554723 | GCGCCATTATTCGAGCTAAACAAT | 60.555 | 41.667 | 0.00 | 0.00 | 0.00 | 2.71 |
516 | 522 | 3.242608 | GCGCCATTATTCGAGCTAAACAA | 60.243 | 43.478 | 0.00 | 0.00 | 0.00 | 2.83 |
517 | 523 | 2.286833 | GCGCCATTATTCGAGCTAAACA | 59.713 | 45.455 | 0.00 | 0.00 | 0.00 | 2.83 |
518 | 524 | 2.544267 | AGCGCCATTATTCGAGCTAAAC | 59.456 | 45.455 | 2.29 | 0.00 | 32.73 | 2.01 |
519 | 525 | 2.833794 | AGCGCCATTATTCGAGCTAAA | 58.166 | 42.857 | 2.29 | 0.00 | 32.73 | 1.85 |
520 | 526 | 2.526304 | AGCGCCATTATTCGAGCTAA | 57.474 | 45.000 | 2.29 | 0.00 | 32.73 | 3.09 |
521 | 527 | 2.135139 | CAAGCGCCATTATTCGAGCTA | 58.865 | 47.619 | 2.29 | 0.00 | 34.24 | 3.32 |
522 | 528 | 0.940126 | CAAGCGCCATTATTCGAGCT | 59.060 | 50.000 | 2.29 | 0.00 | 36.40 | 4.09 |
523 | 529 | 0.040958 | CCAAGCGCCATTATTCGAGC | 60.041 | 55.000 | 2.29 | 0.00 | 0.00 | 5.03 |
524 | 530 | 0.588252 | CCCAAGCGCCATTATTCGAG | 59.412 | 55.000 | 2.29 | 0.00 | 0.00 | 4.04 |
525 | 531 | 1.444119 | GCCCAAGCGCCATTATTCGA | 61.444 | 55.000 | 2.29 | 0.00 | 0.00 | 3.71 |
526 | 532 | 1.008538 | GCCCAAGCGCCATTATTCG | 60.009 | 57.895 | 2.29 | 0.00 | 0.00 | 3.34 |
542 | 548 | 4.899239 | CATCAGTCCCCTCGCGCC | 62.899 | 72.222 | 0.00 | 0.00 | 0.00 | 6.53 |
543 | 549 | 4.899239 | CCATCAGTCCCCTCGCGC | 62.899 | 72.222 | 0.00 | 0.00 | 0.00 | 6.86 |
544 | 550 | 4.899239 | GCCATCAGTCCCCTCGCG | 62.899 | 72.222 | 0.00 | 0.00 | 0.00 | 5.87 |
545 | 551 | 4.899239 | CGCCATCAGTCCCCTCGC | 62.899 | 72.222 | 0.00 | 0.00 | 0.00 | 5.03 |
546 | 552 | 4.227134 | CCGCCATCAGTCCCCTCG | 62.227 | 72.222 | 0.00 | 0.00 | 0.00 | 4.63 |
547 | 553 | 3.866582 | CCCGCCATCAGTCCCCTC | 61.867 | 72.222 | 0.00 | 0.00 | 0.00 | 4.30 |
548 | 554 | 3.326385 | TACCCGCCATCAGTCCCCT | 62.326 | 63.158 | 0.00 | 0.00 | 0.00 | 4.79 |
549 | 555 | 2.766651 | TACCCGCCATCAGTCCCC | 60.767 | 66.667 | 0.00 | 0.00 | 0.00 | 4.81 |
550 | 556 | 2.822399 | CTACCCGCCATCAGTCCC | 59.178 | 66.667 | 0.00 | 0.00 | 0.00 | 4.46 |
551 | 557 | 1.113517 | TAGCTACCCGCCATCAGTCC | 61.114 | 60.000 | 0.00 | 0.00 | 40.39 | 3.85 |
552 | 558 | 0.969894 | ATAGCTACCCGCCATCAGTC | 59.030 | 55.000 | 0.00 | 0.00 | 40.39 | 3.51 |
553 | 559 | 0.969894 | GATAGCTACCCGCCATCAGT | 59.030 | 55.000 | 0.00 | 0.00 | 36.84 | 3.41 |
554 | 560 | 0.109086 | CGATAGCTACCCGCCATCAG | 60.109 | 60.000 | 0.00 | 0.00 | 36.68 | 2.90 |
587 | 593 | 4.926832 | GCGGTACCAAACAAATTAGCATTT | 59.073 | 37.500 | 13.54 | 0.00 | 32.36 | 2.32 |
593 | 599 | 4.216687 | CCTTGAGCGGTACCAAACAAATTA | 59.783 | 41.667 | 13.54 | 0.00 | 0.00 | 1.40 |
753 | 1097 | 7.782644 | TCGTGGATAAATTTATGGAAGGGAAAT | 59.217 | 33.333 | 15.39 | 0.00 | 0.00 | 2.17 |
757 | 1101 | 6.062095 | ACTCGTGGATAAATTTATGGAAGGG | 58.938 | 40.000 | 15.39 | 6.41 | 0.00 | 3.95 |
885 | 1229 | 0.463295 | ATCGTTGCTCCATGCTCAGG | 60.463 | 55.000 | 0.00 | 0.00 | 43.37 | 3.86 |
952 | 1546 | 1.170919 | AGCAAGCGGATGATGGATGC | 61.171 | 55.000 | 0.00 | 0.00 | 0.00 | 3.91 |
1104 | 1698 | 1.227263 | GCGCATGTCCTCGGTGTAT | 60.227 | 57.895 | 0.30 | 0.00 | 0.00 | 2.29 |
1158 | 1752 | 3.319198 | TCGACCACCTTGAGGGCC | 61.319 | 66.667 | 0.00 | 0.00 | 40.27 | 5.80 |
1412 | 2006 | 4.259810 | CGATCATTGGATGTGTCAACGTAC | 60.260 | 45.833 | 0.00 | 0.00 | 32.67 | 3.67 |
1511 | 2105 | 2.257461 | AGGACCCTGTAGGCCTCCT | 61.257 | 63.158 | 9.68 | 4.73 | 37.54 | 3.69 |
1639 | 2233 | 1.216710 | CAGCCCTCTCGAACCACTC | 59.783 | 63.158 | 0.00 | 0.00 | 0.00 | 3.51 |
1651 | 2245 | 1.305623 | CATCCTTGAAGCCAGCCCT | 59.694 | 57.895 | 0.00 | 0.00 | 0.00 | 5.19 |
1656 | 2250 | 0.391661 | GCTCGACATCCTTGAAGCCA | 60.392 | 55.000 | 0.00 | 0.00 | 0.00 | 4.75 |
1820 | 2414 | 7.440255 | CCGATAATTTTATCTCCCGTTACAACT | 59.560 | 37.037 | 8.30 | 0.00 | 37.88 | 3.16 |
1821 | 2415 | 7.225341 | ACCGATAATTTTATCTCCCGTTACAAC | 59.775 | 37.037 | 8.30 | 0.00 | 37.88 | 3.32 |
1832 | 2426 | 8.076178 | GCTTGCACATAACCGATAATTTTATCT | 58.924 | 33.333 | 8.30 | 0.00 | 37.88 | 1.98 |
1833 | 2427 | 7.860373 | TGCTTGCACATAACCGATAATTTTATC | 59.140 | 33.333 | 0.00 | 1.01 | 36.92 | 1.75 |
1835 | 2429 | 6.970043 | GTGCTTGCACATAACCGATAATTTTA | 59.030 | 34.615 | 19.36 | 0.00 | 0.00 | 1.52 |
1862 | 2456 | 7.646526 | TCGTACGAAATTCACTATAGGACATTG | 59.353 | 37.037 | 17.11 | 0.00 | 0.00 | 2.82 |
1863 | 2457 | 7.646922 | GTCGTACGAAATTCACTATAGGACATT | 59.353 | 37.037 | 21.39 | 0.00 | 31.21 | 2.71 |
1864 | 2458 | 7.137426 | GTCGTACGAAATTCACTATAGGACAT | 58.863 | 38.462 | 21.39 | 0.00 | 31.21 | 3.06 |
1866 | 2460 | 6.489675 | TGTCGTACGAAATTCACTATAGGAC | 58.510 | 40.000 | 21.39 | 2.53 | 0.00 | 3.85 |
1867 | 2461 | 6.682423 | TGTCGTACGAAATTCACTATAGGA | 57.318 | 37.500 | 21.39 | 0.00 | 0.00 | 2.94 |
1871 | 2465 | 7.005380 | CGTTTTTGTCGTACGAAATTCACTAT | 58.995 | 34.615 | 21.39 | 0.00 | 37.47 | 2.12 |
1908 | 2502 | 2.290641 | ACTGTTGATCGCTTTGGTGAAC | 59.709 | 45.455 | 0.00 | 0.00 | 35.48 | 3.18 |
1910 | 2504 | 1.872952 | CACTGTTGATCGCTTTGGTGA | 59.127 | 47.619 | 0.00 | 0.00 | 36.35 | 4.02 |
1933 | 2527 | 4.431809 | CAAATATGATGAGCGGGCAAAAA | 58.568 | 39.130 | 0.00 | 0.00 | 0.00 | 1.94 |
1934 | 2528 | 3.737663 | GCAAATATGATGAGCGGGCAAAA | 60.738 | 43.478 | 0.00 | 0.00 | 0.00 | 2.44 |
1935 | 2529 | 2.223782 | GCAAATATGATGAGCGGGCAAA | 60.224 | 45.455 | 0.00 | 0.00 | 0.00 | 3.68 |
1937 | 2531 | 0.953727 | GCAAATATGATGAGCGGGCA | 59.046 | 50.000 | 0.00 | 0.00 | 0.00 | 5.36 |
1938 | 2532 | 0.110056 | CGCAAATATGATGAGCGGGC | 60.110 | 55.000 | 0.00 | 0.00 | 44.20 | 6.13 |
1942 | 2536 | 1.056464 | CGCGCGCAAATATGATGAGC | 61.056 | 55.000 | 32.61 | 7.23 | 39.77 | 4.26 |
1943 | 2537 | 0.233074 | ACGCGCGCAAATATGATGAG | 59.767 | 50.000 | 32.58 | 12.35 | 0.00 | 2.90 |
1944 | 2538 | 0.655208 | AACGCGCGCAAATATGATGA | 59.345 | 45.000 | 32.58 | 0.00 | 0.00 | 2.92 |
1945 | 2539 | 0.765953 | CAACGCGCGCAAATATGATG | 59.234 | 50.000 | 32.58 | 14.29 | 0.00 | 3.07 |
1946 | 2540 | 0.655208 | TCAACGCGCGCAAATATGAT | 59.345 | 45.000 | 32.58 | 3.21 | 0.00 | 2.45 |
1947 | 2541 | 0.655208 | ATCAACGCGCGCAAATATGA | 59.345 | 45.000 | 32.58 | 24.47 | 0.00 | 2.15 |
1950 | 2544 | 1.061729 | CCATCAACGCGCGCAAATA | 59.938 | 52.632 | 32.58 | 13.96 | 0.00 | 1.40 |
1951 | 2545 | 2.202466 | CCATCAACGCGCGCAAAT | 60.202 | 55.556 | 32.58 | 17.65 | 0.00 | 2.32 |
1952 | 2546 | 3.349808 | TCCATCAACGCGCGCAAA | 61.350 | 55.556 | 32.58 | 15.92 | 0.00 | 3.68 |
1953 | 2547 | 4.083600 | GTCCATCAACGCGCGCAA | 62.084 | 61.111 | 32.58 | 16.34 | 0.00 | 4.85 |
1955 | 2549 | 3.308878 | AAAGTCCATCAACGCGCGC | 62.309 | 57.895 | 32.58 | 23.91 | 0.00 | 6.86 |
1959 | 2553 | 1.212751 | GGCCAAAGTCCATCAACGC | 59.787 | 57.895 | 0.00 | 0.00 | 0.00 | 4.84 |
1960 | 2554 | 0.893270 | TGGGCCAAAGTCCATCAACG | 60.893 | 55.000 | 2.13 | 0.00 | 45.08 | 4.10 |
1968 | 2562 | 2.859992 | CAGCTACTGGGCCAAAGTC | 58.140 | 57.895 | 13.25 | 4.95 | 0.00 | 3.01 |
1978 | 2572 | 2.202851 | CTGCCGCTCCAGCTACTG | 60.203 | 66.667 | 0.00 | 0.00 | 39.32 | 2.74 |
1979 | 2573 | 3.465403 | CCTGCCGCTCCAGCTACT | 61.465 | 66.667 | 0.00 | 0.00 | 39.32 | 2.57 |
1983 | 2577 | 4.552365 | TATGCCTGCCGCTCCAGC | 62.552 | 66.667 | 0.00 | 0.00 | 38.78 | 4.85 |
1984 | 2578 | 2.280660 | CTATGCCTGCCGCTCCAG | 60.281 | 66.667 | 0.00 | 0.00 | 38.78 | 3.86 |
1985 | 2579 | 3.865383 | CCTATGCCTGCCGCTCCA | 61.865 | 66.667 | 0.00 | 0.00 | 38.78 | 3.86 |
1987 | 2581 | 2.280457 | GACCTATGCCTGCCGCTC | 60.280 | 66.667 | 0.00 | 0.00 | 38.78 | 5.03 |
1989 | 2583 | 3.697439 | TTGGACCTATGCCTGCCGC | 62.697 | 63.158 | 0.00 | 0.00 | 38.31 | 6.53 |
1990 | 2584 | 1.819632 | GTTGGACCTATGCCTGCCG | 60.820 | 63.158 | 0.00 | 0.00 | 0.00 | 5.69 |
1992 | 2586 | 1.369091 | CGTGTTGGACCTATGCCTGC | 61.369 | 60.000 | 0.00 | 0.00 | 0.00 | 4.85 |
1993 | 2587 | 0.744414 | CCGTGTTGGACCTATGCCTG | 60.744 | 60.000 | 0.00 | 0.00 | 42.00 | 4.85 |
2011 | 2921 | 1.103398 | AGCGCAAAGGCCACATATCC | 61.103 | 55.000 | 11.47 | 0.00 | 36.38 | 2.59 |
2029 | 2939 | 8.979574 | GGTTGTATTGTTCTTATATCCGAGAAG | 58.020 | 37.037 | 0.00 | 0.00 | 32.91 | 2.85 |
2065 | 2975 | 4.401202 | ACCAAAGAACTACCAAACCTTGTG | 59.599 | 41.667 | 0.00 | 0.00 | 0.00 | 3.33 |
2066 | 2976 | 4.401202 | CACCAAAGAACTACCAAACCTTGT | 59.599 | 41.667 | 0.00 | 0.00 | 0.00 | 3.16 |
2067 | 2977 | 4.202111 | CCACCAAAGAACTACCAAACCTTG | 60.202 | 45.833 | 0.00 | 0.00 | 0.00 | 3.61 |
2068 | 2978 | 3.958147 | CCACCAAAGAACTACCAAACCTT | 59.042 | 43.478 | 0.00 | 0.00 | 0.00 | 3.50 |
2069 | 2979 | 3.562182 | CCACCAAAGAACTACCAAACCT | 58.438 | 45.455 | 0.00 | 0.00 | 0.00 | 3.50 |
2098 | 3008 | 0.780637 | TCACTCTGACCTCCCTCAGT | 59.219 | 55.000 | 0.00 | 0.00 | 39.08 | 3.41 |
2107 | 3017 | 1.824230 | AGCTCTCACATCACTCTGACC | 59.176 | 52.381 | 0.00 | 0.00 | 0.00 | 4.02 |
2122 | 3032 | 1.272147 | GGATTTGAACCCCACAGCTCT | 60.272 | 52.381 | 0.00 | 0.00 | 0.00 | 4.09 |
2136 | 3046 | 8.253113 | AGAAAAAGTAAGCACATATGGGATTTG | 58.747 | 33.333 | 14.61 | 0.00 | 0.00 | 2.32 |
2162 | 3073 | 7.443879 | TGCCTTCGATCTAATAATAATGCAACA | 59.556 | 33.333 | 0.00 | 0.00 | 0.00 | 3.33 |
2164 | 3075 | 7.443879 | TGTGCCTTCGATCTAATAATAATGCAA | 59.556 | 33.333 | 0.00 | 0.00 | 0.00 | 4.08 |
2188 | 3099 | 2.542907 | CCGAACGGCTGCAACTTGT | 61.543 | 57.895 | 0.50 | 0.00 | 0.00 | 3.16 |
2199 | 3110 | 3.041940 | GACACTGTGGCCGAACGG | 61.042 | 66.667 | 13.09 | 9.00 | 38.57 | 4.44 |
2200 | 3111 | 3.041940 | GGACACTGTGGCCGAACG | 61.042 | 66.667 | 18.48 | 0.00 | 34.69 | 3.95 |
2216 | 3127 | 2.656947 | ATTTCATATGTGGTCCCCGG | 57.343 | 50.000 | 1.90 | 0.00 | 0.00 | 5.73 |
2230 | 3141 | 7.441017 | ACAAAAGAAAATCATCCGGAATTTCA | 58.559 | 30.769 | 24.73 | 6.07 | 44.39 | 2.69 |
2231 | 3142 | 7.889589 | ACAAAAGAAAATCATCCGGAATTTC | 57.110 | 32.000 | 9.01 | 16.39 | 42.99 | 2.17 |
2238 | 3149 | 7.201266 | CGCTAGAAAACAAAAGAAAATCATCCG | 60.201 | 37.037 | 0.00 | 0.00 | 0.00 | 4.18 |
2244 | 3160 | 8.188139 | TCTGTTCGCTAGAAAACAAAAGAAAAT | 58.812 | 29.630 | 10.44 | 0.00 | 38.23 | 1.82 |
2246 | 3162 | 6.964934 | GTCTGTTCGCTAGAAAACAAAAGAAA | 59.035 | 34.615 | 10.44 | 0.00 | 38.23 | 2.52 |
2249 | 3165 | 5.677178 | GTGTCTGTTCGCTAGAAAACAAAAG | 59.323 | 40.000 | 10.44 | 2.17 | 38.23 | 2.27 |
2260 | 3176 | 5.493133 | AATTTTTGTGTGTCTGTTCGCTA | 57.507 | 34.783 | 0.00 | 0.00 | 0.00 | 4.26 |
2265 | 3181 | 7.971722 | GTGGTACTAAATTTTTGTGTGTCTGTT | 59.028 | 33.333 | 0.00 | 0.00 | 0.00 | 3.16 |
2268 | 3184 | 6.831868 | AGGTGGTACTAAATTTTTGTGTGTCT | 59.168 | 34.615 | 0.00 | 0.00 | 0.00 | 3.41 |
2272 | 3188 | 6.608002 | TCCAAGGTGGTACTAAATTTTTGTGT | 59.392 | 34.615 | 0.00 | 0.00 | 39.03 | 3.72 |
2276 | 3192 | 7.523415 | TCTCTCCAAGGTGGTACTAAATTTTT | 58.477 | 34.615 | 0.00 | 0.00 | 39.03 | 1.94 |
2308 | 3224 | 7.494625 | TCACTTTTTCTTTCGTAGTTCACAGAT | 59.505 | 33.333 | 0.00 | 0.00 | 0.00 | 2.90 |
2309 | 3225 | 6.814644 | TCACTTTTTCTTTCGTAGTTCACAGA | 59.185 | 34.615 | 0.00 | 0.00 | 0.00 | 3.41 |
2310 | 3226 | 7.000575 | TCACTTTTTCTTTCGTAGTTCACAG | 57.999 | 36.000 | 0.00 | 0.00 | 0.00 | 3.66 |
2311 | 3227 | 6.971527 | TCACTTTTTCTTTCGTAGTTCACA | 57.028 | 33.333 | 0.00 | 0.00 | 0.00 | 3.58 |
2312 | 3228 | 7.747357 | TGTTTCACTTTTTCTTTCGTAGTTCAC | 59.253 | 33.333 | 0.00 | 0.00 | 0.00 | 3.18 |
2313 | 3229 | 7.808672 | TGTTTCACTTTTTCTTTCGTAGTTCA | 58.191 | 30.769 | 0.00 | 0.00 | 0.00 | 3.18 |
2314 | 3230 | 8.734030 | CATGTTTCACTTTTTCTTTCGTAGTTC | 58.266 | 33.333 | 0.00 | 0.00 | 0.00 | 3.01 |
2315 | 3231 | 8.241367 | ACATGTTTCACTTTTTCTTTCGTAGTT | 58.759 | 29.630 | 0.00 | 0.00 | 0.00 | 2.24 |
2316 | 3232 | 7.758495 | ACATGTTTCACTTTTTCTTTCGTAGT | 58.242 | 30.769 | 0.00 | 0.00 | 0.00 | 2.73 |
2317 | 3233 | 8.614994 | AACATGTTTCACTTTTTCTTTCGTAG | 57.385 | 30.769 | 4.92 | 0.00 | 0.00 | 3.51 |
2319 | 3235 | 8.973835 | TTAACATGTTTCACTTTTTCTTTCGT | 57.026 | 26.923 | 17.78 | 0.00 | 0.00 | 3.85 |
2320 | 3236 | 9.833894 | CATTAACATGTTTCACTTTTTCTTTCG | 57.166 | 29.630 | 17.78 | 0.00 | 0.00 | 3.46 |
2325 | 3241 | 7.708752 | TGGTCCATTAACATGTTTCACTTTTTC | 59.291 | 33.333 | 17.78 | 0.88 | 0.00 | 2.29 |
2328 | 3244 | 6.723298 | TGGTCCATTAACATGTTTCACTTT | 57.277 | 33.333 | 17.78 | 0.00 | 0.00 | 2.66 |
2330 | 3246 | 6.462347 | GGTTTGGTCCATTAACATGTTTCACT | 60.462 | 38.462 | 17.78 | 0.00 | 0.00 | 3.41 |
2345 | 3261 | 4.044065 | AGGTGATATTCTTGGTTTGGTCCA | 59.956 | 41.667 | 0.00 | 0.00 | 35.49 | 4.02 |
2399 | 3316 | 4.377839 | TTTTTGTTCTTCCGTTGCATCA | 57.622 | 36.364 | 0.00 | 0.00 | 0.00 | 3.07 |
2401 | 3318 | 4.942852 | TGATTTTTGTTCTTCCGTTGCAT | 58.057 | 34.783 | 0.00 | 0.00 | 0.00 | 3.96 |
2428 | 3348 | 3.711863 | AGTGTGGTCATGGCCATTAAAT | 58.288 | 40.909 | 24.46 | 8.06 | 41.08 | 1.40 |
2431 | 3351 | 2.824936 | CAAAGTGTGGTCATGGCCATTA | 59.175 | 45.455 | 24.46 | 12.38 | 41.08 | 1.90 |
2448 | 3368 | 4.093998 | GTGTATGTCAGTGATGGAGCAAAG | 59.906 | 45.833 | 0.00 | 0.00 | 0.00 | 2.77 |
2462 | 3382 | 8.531146 | TGAAAATGAGACTGATAGTGTATGTCA | 58.469 | 33.333 | 0.00 | 0.00 | 0.00 | 3.58 |
2465 | 3385 | 9.538508 | TCATGAAAATGAGACTGATAGTGTATG | 57.461 | 33.333 | 0.00 | 0.00 | 0.00 | 2.39 |
2558 | 3478 | 9.300441 | CGTAAAAATGTCGAATTTGAAAAATGG | 57.700 | 29.630 | 0.00 | 0.00 | 0.00 | 3.16 |
2619 | 3561 | 9.439500 | AAGTTTGCAAATGTATAAAATGCTCAT | 57.561 | 25.926 | 16.21 | 0.00 | 37.86 | 2.90 |
2620 | 3562 | 8.830201 | AAGTTTGCAAATGTATAAAATGCTCA | 57.170 | 26.923 | 16.21 | 0.00 | 37.86 | 4.26 |
2677 | 3621 | 6.575162 | ATGTTCGCCTATTCAAGAAAAGTT | 57.425 | 33.333 | 0.00 | 0.00 | 0.00 | 2.66 |
2679 | 3623 | 7.308435 | AGAAATGTTCGCCTATTCAAGAAAAG | 58.692 | 34.615 | 0.00 | 0.00 | 34.02 | 2.27 |
2785 | 3764 | 7.754069 | TCAAAACTGTTTGCTTATTCAAGTG | 57.246 | 32.000 | 6.53 | 0.00 | 43.30 | 3.16 |
2793 | 3772 | 9.877178 | TCCTAAAAATTCAAAACTGTTTGCTTA | 57.123 | 25.926 | 6.53 | 0.00 | 43.30 | 3.09 |
2794 | 3773 | 8.785329 | TCCTAAAAATTCAAAACTGTTTGCTT | 57.215 | 26.923 | 6.53 | 0.00 | 43.30 | 3.91 |
2795 | 3774 | 8.962884 | ATCCTAAAAATTCAAAACTGTTTGCT | 57.037 | 26.923 | 6.53 | 0.00 | 43.30 | 3.91 |
2840 | 3963 | 9.136952 | TGAACAAAATTTTGCCAATTCAAAAAG | 57.863 | 25.926 | 26.94 | 2.71 | 45.50 | 2.27 |
2937 | 4069 | 6.883756 | ACAAATGTTCCCAGTTTTGAAAACAT | 59.116 | 30.769 | 21.34 | 3.72 | 39.13 | 2.71 |
3145 | 4379 | 3.199071 | TGGGATAAGATACAACGTGCCTT | 59.801 | 43.478 | 0.00 | 0.00 | 0.00 | 4.35 |
3185 | 4419 | 3.679639 | GCCCATGCAATAGGAACCTTTTG | 60.680 | 47.826 | 15.95 | 15.95 | 37.80 | 2.44 |
3316 | 4559 | 6.948309 | ACCTAATAATAAAGGGGCTATTGCTG | 59.052 | 38.462 | 0.00 | 0.00 | 37.18 | 4.41 |
3594 | 4927 | 8.865001 | GCGATGCCAAATTAATTAAACTTGTAA | 58.135 | 29.630 | 16.33 | 8.77 | 0.00 | 2.41 |
3596 | 4929 | 6.870965 | TGCGATGCCAAATTAATTAAACTTGT | 59.129 | 30.769 | 16.33 | 4.70 | 0.00 | 3.16 |
3597 | 4930 | 7.288317 | TGCGATGCCAAATTAATTAAACTTG | 57.712 | 32.000 | 1.21 | 8.78 | 0.00 | 3.16 |
3630 | 4974 | 6.892658 | TTGCTAGATCTGCTTAACCAAAAA | 57.107 | 33.333 | 5.18 | 0.00 | 0.00 | 1.94 |
3677 | 5021 | 6.882610 | AGCTGTACAAGATGAAAATGTTGA | 57.117 | 33.333 | 0.00 | 0.00 | 0.00 | 3.18 |
3679 | 5023 | 6.040842 | ACCAAGCTGTACAAGATGAAAATGTT | 59.959 | 34.615 | 0.00 | 0.00 | 0.00 | 2.71 |
3713 | 5057 | 1.009829 | GTGGCTTGCTAACATCCTCG | 58.990 | 55.000 | 0.00 | 0.00 | 0.00 | 4.63 |
3779 | 5123 | 3.788227 | AGGAAGAAGTATGTGGCACAA | 57.212 | 42.857 | 25.95 | 11.25 | 44.16 | 3.33 |
3782 | 5126 | 3.369471 | GCACTAGGAAGAAGTATGTGGCA | 60.369 | 47.826 | 0.00 | 0.00 | 0.00 | 4.92 |
3869 | 5213 | 1.152030 | TTGTCTCCTCCTGCCAGGT | 60.152 | 57.895 | 11.27 | 0.00 | 36.53 | 4.00 |
3891 | 5235 | 6.552725 | ACAGCTTAGATCAGATATTGACTCCA | 59.447 | 38.462 | 0.00 | 0.00 | 38.99 | 3.86 |
3914 | 5258 | 8.037758 | ACATGAAACAAAAGTGGTATTTTCACA | 58.962 | 29.630 | 0.00 | 0.00 | 36.18 | 3.58 |
3926 | 5270 | 6.454795 | ACAGAACACAACATGAAACAAAAGT | 58.545 | 32.000 | 0.00 | 0.00 | 0.00 | 2.66 |
3930 | 5274 | 5.356751 | AGCTACAGAACACAACATGAAACAA | 59.643 | 36.000 | 0.00 | 0.00 | 0.00 | 2.83 |
3944 | 5288 | 7.148787 | GCGTCCACATATTTATAGCTACAGAAC | 60.149 | 40.741 | 0.00 | 0.00 | 0.00 | 3.01 |
3947 | 5291 | 6.089551 | GTGCGTCCACATATTTATAGCTACAG | 59.910 | 42.308 | 0.00 | 0.00 | 41.67 | 2.74 |
3952 | 5296 | 3.739300 | ACGTGCGTCCACATATTTATAGC | 59.261 | 43.478 | 0.00 | 0.00 | 42.17 | 2.97 |
3958 | 5302 | 1.366111 | GGCACGTGCGTCCACATATT | 61.366 | 55.000 | 32.35 | 0.00 | 42.17 | 1.28 |
3973 | 5317 | 1.482278 | GATCGATCTTCTGACGGCAC | 58.518 | 55.000 | 18.29 | 0.00 | 0.00 | 5.01 |
3999 | 5356 | 1.031571 | TCGGTTGATGCATGAAGCCC | 61.032 | 55.000 | 20.06 | 8.69 | 44.83 | 5.19 |
4004 | 5361 | 3.493176 | CCTCTGTATCGGTTGATGCATGA | 60.493 | 47.826 | 2.46 | 0.00 | 44.63 | 3.07 |
4005 | 5362 | 2.804527 | CCTCTGTATCGGTTGATGCATG | 59.195 | 50.000 | 2.46 | 0.00 | 44.63 | 4.06 |
4006 | 5363 | 2.808202 | GCCTCTGTATCGGTTGATGCAT | 60.808 | 50.000 | 0.00 | 0.00 | 44.63 | 3.96 |
4021 | 5378 | 0.388294 | TCATCGAGCATCTGCCTCTG | 59.612 | 55.000 | 0.00 | 0.00 | 43.38 | 3.35 |
4030 | 5387 | 0.249120 | TTTCCCACGTCATCGAGCAT | 59.751 | 50.000 | 0.00 | 0.00 | 40.62 | 3.79 |
4038 | 5395 | 2.489971 | GTCAATCAGTTTCCCACGTCA | 58.510 | 47.619 | 0.00 | 0.00 | 0.00 | 4.35 |
4042 | 5399 | 2.814336 | GTCTGGTCAATCAGTTTCCCAC | 59.186 | 50.000 | 0.00 | 0.00 | 36.25 | 4.61 |
4052 | 5409 | 3.057946 | GCAGGAAACAAGTCTGGTCAATC | 60.058 | 47.826 | 0.00 | 0.00 | 0.00 | 2.67 |
4058 | 5415 | 2.260844 | TGAGCAGGAAACAAGTCTGG | 57.739 | 50.000 | 0.00 | 0.00 | 0.00 | 3.86 |
4076 | 5433 | 5.514559 | CACACAAGTCGAAGAGAGATACATG | 59.485 | 44.000 | 0.00 | 0.00 | 36.95 | 3.21 |
4106 | 5463 | 2.961536 | TGATGGACCTTCTTAGGGGA | 57.038 | 50.000 | 8.71 | 0.00 | 46.58 | 4.81 |
4107 | 5464 | 3.321950 | AGATGATGGACCTTCTTAGGGG | 58.678 | 50.000 | 8.71 | 0.00 | 46.58 | 4.79 |
4108 | 5465 | 3.326297 | GGAGATGATGGACCTTCTTAGGG | 59.674 | 52.174 | 8.71 | 0.00 | 46.58 | 3.53 |
4149 | 5506 | 8.301720 | ACTATGTGTTACAACGAATGACTTCTA | 58.698 | 33.333 | 0.00 | 0.00 | 0.00 | 2.10 |
4200 | 5557 | 8.958506 | ACTTTAATACGTAGAGAAGATGTGACT | 58.041 | 33.333 | 16.67 | 0.00 | 0.00 | 3.41 |
4203 | 5560 | 9.999009 | TGTACTTTAATACGTAGAGAAGATGTG | 57.001 | 33.333 | 16.67 | 0.00 | 0.00 | 3.21 |
4217 | 5574 | 8.649841 | TGAGCACACGTTTATGTACTTTAATAC | 58.350 | 33.333 | 0.00 | 0.00 | 0.00 | 1.89 |
4228 | 5585 | 4.403015 | TGACAATGAGCACACGTTTATG | 57.597 | 40.909 | 0.00 | 0.00 | 0.00 | 1.90 |
4229 | 5586 | 4.672542 | GCATGACAATGAGCACACGTTTAT | 60.673 | 41.667 | 0.00 | 0.00 | 35.67 | 1.40 |
4230 | 5587 | 3.364864 | GCATGACAATGAGCACACGTTTA | 60.365 | 43.478 | 0.00 | 0.00 | 35.67 | 2.01 |
4234 | 5591 | 0.518195 | TGCATGACAATGAGCACACG | 59.482 | 50.000 | 0.00 | 0.00 | 35.67 | 4.49 |
4235 | 5592 | 2.710220 | TTGCATGACAATGAGCACAC | 57.290 | 45.000 | 0.00 | 0.00 | 36.62 | 3.82 |
4257 | 5614 | 0.109781 | GTGGTTTCGATGTTGCGCAT | 60.110 | 50.000 | 12.75 | 0.00 | 41.24 | 4.73 |
4278 | 5635 | 7.120138 | ACAGACTTCAAAGTTTTAAAAGACGGA | 59.880 | 33.333 | 0.00 | 0.00 | 39.88 | 4.69 |
4334 | 5695 | 8.921205 | GGGAGTACCTAACTATTGACATTAGAA | 58.079 | 37.037 | 10.59 | 0.00 | 39.07 | 2.10 |
4352 | 5713 | 2.845363 | TTTGAAACGGAGGGAGTACC | 57.155 | 50.000 | 0.00 | 0.00 | 40.67 | 3.34 |
4354 | 5715 | 5.246656 | TGAGTAATTTGAAACGGAGGGAGTA | 59.753 | 40.000 | 0.00 | 0.00 | 0.00 | 2.59 |
4355 | 5716 | 4.041198 | TGAGTAATTTGAAACGGAGGGAGT | 59.959 | 41.667 | 0.00 | 0.00 | 0.00 | 3.85 |
4356 | 5717 | 4.575885 | TGAGTAATTTGAAACGGAGGGAG | 58.424 | 43.478 | 0.00 | 0.00 | 0.00 | 4.30 |
4357 | 5718 | 4.627284 | TGAGTAATTTGAAACGGAGGGA | 57.373 | 40.909 | 0.00 | 0.00 | 0.00 | 4.20 |
4358 | 5719 | 4.034048 | CGATGAGTAATTTGAAACGGAGGG | 59.966 | 45.833 | 0.00 | 0.00 | 0.00 | 4.30 |
4359 | 5720 | 4.630069 | ACGATGAGTAATTTGAAACGGAGG | 59.370 | 41.667 | 0.00 | 0.00 | 0.00 | 4.30 |
4360 | 5721 | 5.445939 | CCACGATGAGTAATTTGAAACGGAG | 60.446 | 44.000 | 0.00 | 0.00 | 0.00 | 4.63 |
4361 | 5722 | 4.390603 | CCACGATGAGTAATTTGAAACGGA | 59.609 | 41.667 | 0.00 | 0.00 | 0.00 | 4.69 |
4362 | 5723 | 4.153475 | ACCACGATGAGTAATTTGAAACGG | 59.847 | 41.667 | 0.00 | 0.00 | 0.00 | 4.44 |
4363 | 5724 | 5.277601 | ACCACGATGAGTAATTTGAAACG | 57.722 | 39.130 | 0.00 | 0.00 | 0.00 | 3.60 |
4364 | 5725 | 7.924103 | AAAACCACGATGAGTAATTTGAAAC | 57.076 | 32.000 | 0.00 | 0.00 | 0.00 | 2.78 |
4365 | 5726 | 8.842280 | ACTAAAACCACGATGAGTAATTTGAAA | 58.158 | 29.630 | 0.00 | 0.00 | 0.00 | 2.69 |
4366 | 5727 | 8.385898 | ACTAAAACCACGATGAGTAATTTGAA | 57.614 | 30.769 | 0.00 | 0.00 | 0.00 | 2.69 |
4367 | 5728 | 7.972832 | ACTAAAACCACGATGAGTAATTTGA | 57.027 | 32.000 | 0.00 | 0.00 | 0.00 | 2.69 |
4368 | 5729 | 8.286800 | TGAACTAAAACCACGATGAGTAATTTG | 58.713 | 33.333 | 0.00 | 0.00 | 0.00 | 2.32 |
4369 | 5730 | 8.385898 | TGAACTAAAACCACGATGAGTAATTT | 57.614 | 30.769 | 0.00 | 0.00 | 0.00 | 1.82 |
4370 | 5731 | 7.972832 | TGAACTAAAACCACGATGAGTAATT | 57.027 | 32.000 | 0.00 | 0.00 | 0.00 | 1.40 |
4371 | 5732 | 7.972832 | TTGAACTAAAACCACGATGAGTAAT | 57.027 | 32.000 | 0.00 | 0.00 | 0.00 | 1.89 |
4372 | 5733 | 7.789273 | TTTGAACTAAAACCACGATGAGTAA | 57.211 | 32.000 | 0.00 | 0.00 | 0.00 | 2.24 |
4373 | 5734 | 7.972832 | ATTTGAACTAAAACCACGATGAGTA | 57.027 | 32.000 | 0.00 | 0.00 | 0.00 | 2.59 |
4374 | 5735 | 6.877611 | ATTTGAACTAAAACCACGATGAGT | 57.122 | 33.333 | 0.00 | 0.00 | 0.00 | 3.41 |
4375 | 5736 | 8.664798 | TCATATTTGAACTAAAACCACGATGAG | 58.335 | 33.333 | 0.00 | 0.00 | 0.00 | 2.90 |
4376 | 5737 | 8.554835 | TCATATTTGAACTAAAACCACGATGA | 57.445 | 30.769 | 0.00 | 0.00 | 0.00 | 2.92 |
4400 | 5761 | 9.968743 | CCAAATTACTCATCGTAGTTTTAGTTC | 57.031 | 33.333 | 0.00 | 0.00 | 36.31 | 3.01 |
4401 | 5762 | 9.715121 | TCCAAATTACTCATCGTAGTTTTAGTT | 57.285 | 29.630 | 0.00 | 0.00 | 36.31 | 2.24 |
4402 | 5763 | 9.715121 | TTCCAAATTACTCATCGTAGTTTTAGT | 57.285 | 29.630 | 0.00 | 0.00 | 36.31 | 2.24 |
4403 | 5764 | 9.968743 | GTTCCAAATTACTCATCGTAGTTTTAG | 57.031 | 33.333 | 0.00 | 0.00 | 36.31 | 1.85 |
4404 | 5765 | 8.649841 | CGTTCCAAATTACTCATCGTAGTTTTA | 58.350 | 33.333 | 0.00 | 0.00 | 36.31 | 1.52 |
4405 | 5766 | 7.360607 | CCGTTCCAAATTACTCATCGTAGTTTT | 60.361 | 37.037 | 0.00 | 0.00 | 36.31 | 2.43 |
4406 | 5767 | 6.091713 | CCGTTCCAAATTACTCATCGTAGTTT | 59.908 | 38.462 | 0.00 | 0.00 | 38.20 | 2.66 |
4407 | 5768 | 5.579511 | CCGTTCCAAATTACTCATCGTAGTT | 59.420 | 40.000 | 0.00 | 0.00 | 30.27 | 2.24 |
4408 | 5769 | 5.105635 | TCCGTTCCAAATTACTCATCGTAGT | 60.106 | 40.000 | 0.00 | 0.00 | 0.00 | 2.73 |
4409 | 5770 | 5.345702 | TCCGTTCCAAATTACTCATCGTAG | 58.654 | 41.667 | 0.00 | 0.00 | 0.00 | 3.51 |
4410 | 5771 | 5.327616 | TCCGTTCCAAATTACTCATCGTA | 57.672 | 39.130 | 0.00 | 0.00 | 0.00 | 3.43 |
4411 | 5772 | 4.181578 | CTCCGTTCCAAATTACTCATCGT | 58.818 | 43.478 | 0.00 | 0.00 | 0.00 | 3.73 |
4412 | 5773 | 3.555956 | CCTCCGTTCCAAATTACTCATCG | 59.444 | 47.826 | 0.00 | 0.00 | 0.00 | 3.84 |
4413 | 5774 | 3.877508 | CCCTCCGTTCCAAATTACTCATC | 59.122 | 47.826 | 0.00 | 0.00 | 0.00 | 2.92 |
4414 | 5775 | 3.521937 | TCCCTCCGTTCCAAATTACTCAT | 59.478 | 43.478 | 0.00 | 0.00 | 0.00 | 2.90 |
4415 | 5776 | 2.907696 | TCCCTCCGTTCCAAATTACTCA | 59.092 | 45.455 | 0.00 | 0.00 | 0.00 | 3.41 |
4416 | 5777 | 3.055312 | ACTCCCTCCGTTCCAAATTACTC | 60.055 | 47.826 | 0.00 | 0.00 | 0.00 | 2.59 |
4417 | 5778 | 2.910977 | ACTCCCTCCGTTCCAAATTACT | 59.089 | 45.455 | 0.00 | 0.00 | 0.00 | 2.24 |
4418 | 5779 | 3.345508 | ACTCCCTCCGTTCCAAATTAC | 57.654 | 47.619 | 0.00 | 0.00 | 0.00 | 1.89 |
4419 | 5780 | 4.098894 | AGTACTCCCTCCGTTCCAAATTA | 58.901 | 43.478 | 0.00 | 0.00 | 0.00 | 1.40 |
4420 | 5781 | 2.910977 | AGTACTCCCTCCGTTCCAAATT | 59.089 | 45.455 | 0.00 | 0.00 | 0.00 | 1.82 |
4421 | 5782 | 2.547990 | AGTACTCCCTCCGTTCCAAAT | 58.452 | 47.619 | 0.00 | 0.00 | 0.00 | 2.32 |
4422 | 5783 | 2.019807 | AGTACTCCCTCCGTTCCAAA | 57.980 | 50.000 | 0.00 | 0.00 | 0.00 | 3.28 |
4423 | 5784 | 1.897802 | GAAGTACTCCCTCCGTTCCAA | 59.102 | 52.381 | 0.00 | 0.00 | 0.00 | 3.53 |
4424 | 5785 | 1.076677 | AGAAGTACTCCCTCCGTTCCA | 59.923 | 52.381 | 0.00 | 0.00 | 0.00 | 3.53 |
4425 | 5786 | 1.750206 | GAGAAGTACTCCCTCCGTTCC | 59.250 | 57.143 | 12.00 | 0.00 | 39.53 | 3.62 |
4426 | 5787 | 2.725637 | AGAGAAGTACTCCCTCCGTTC | 58.274 | 52.381 | 16.95 | 1.23 | 45.96 | 3.95 |
4427 | 5788 | 2.826725 | CAAGAGAAGTACTCCCTCCGTT | 59.173 | 50.000 | 16.95 | 7.40 | 45.96 | 4.44 |
4428 | 5789 | 2.448453 | CAAGAGAAGTACTCCCTCCGT | 58.552 | 52.381 | 16.95 | 7.17 | 45.96 | 4.69 |
4429 | 5790 | 1.751924 | CCAAGAGAAGTACTCCCTCCG | 59.248 | 57.143 | 16.95 | 11.08 | 45.96 | 4.63 |
4430 | 5791 | 2.761767 | GACCAAGAGAAGTACTCCCTCC | 59.238 | 54.545 | 16.95 | 3.48 | 45.96 | 4.30 |
4431 | 5792 | 3.432378 | TGACCAAGAGAAGTACTCCCTC | 58.568 | 50.000 | 14.19 | 14.19 | 45.96 | 4.30 |
4432 | 5793 | 3.544698 | TGACCAAGAGAAGTACTCCCT | 57.455 | 47.619 | 0.00 | 0.00 | 45.96 | 4.20 |
4433 | 5794 | 3.769844 | TCATGACCAAGAGAAGTACTCCC | 59.230 | 47.826 | 0.00 | 0.00 | 45.96 | 4.30 |
4434 | 5795 | 5.606348 | ATCATGACCAAGAGAAGTACTCC | 57.394 | 43.478 | 0.00 | 0.00 | 45.96 | 3.85 |
4513 | 5877 | 7.391148 | TTTCTTTGGAGAATGGTAATAGCAC | 57.609 | 36.000 | 0.00 | 0.00 | 41.35 | 4.40 |
4544 | 5908 | 3.328931 | CAGTATCCTCCATAGGTGCCAAT | 59.671 | 47.826 | 0.00 | 0.00 | 44.09 | 3.16 |
4548 | 5912 | 4.464069 | GATCAGTATCCTCCATAGGTGC | 57.536 | 50.000 | 0.00 | 0.00 | 44.09 | 5.01 |
4578 | 5942 | 2.346766 | TGCAGTGAGTTTGTGGACAT | 57.653 | 45.000 | 0.00 | 0.00 | 0.00 | 3.06 |
4669 | 6035 | 9.661954 | TCTTAGGTTTATCAGGAACTATCAGAT | 57.338 | 33.333 | 0.00 | 0.00 | 36.02 | 2.90 |
4785 | 6151 | 6.472887 | CCAAGACCTCTACTATTCCACAAAA | 58.527 | 40.000 | 0.00 | 0.00 | 0.00 | 2.44 |
4789 | 6155 | 4.031611 | ACCCAAGACCTCTACTATTCCAC | 58.968 | 47.826 | 0.00 | 0.00 | 0.00 | 4.02 |
4810 | 6176 | 0.602905 | ACGGTGCTTAGCCAAGTCAC | 60.603 | 55.000 | 0.29 | 9.65 | 37.73 | 3.67 |
4815 | 6181 | 1.877443 | GAGAAAACGGTGCTTAGCCAA | 59.123 | 47.619 | 0.29 | 0.00 | 0.00 | 4.52 |
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.