Multiple sequence alignment - TraesCS4B01G009100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G009100 chr4B 100.000 2948 0 0 1 2948 5934470 5931523 0.000000e+00 5445
1 TraesCS4B01G009100 chr5B 83.899 2385 304 32 213 2549 595637795 595640147 0.000000e+00 2204
2 TraesCS4B01G009100 chr5B 79.061 554 88 17 1170 1702 703110534 703109988 3.610000e-94 355
3 TraesCS4B01G009100 chr5B 86.875 160 17 2 34 193 595637417 595637572 3.020000e-40 176
4 TraesCS4B01G009100 chr4A 79.540 782 124 27 949 1706 492948181 492948950 2.600000e-145 525
5 TraesCS4B01G009100 chr4D 78.231 882 134 41 1156 2012 96602034 96602882 2.030000e-141 512
6 TraesCS4B01G009100 chr6A 78.598 542 97 12 1166 1693 564679846 564680382 1.010000e-89 340
7 TraesCS4B01G009100 chrUn 78.293 539 98 12 1169 1693 334025024 334024491 2.190000e-86 329
8 TraesCS4B01G009100 chr6B 78.229 542 99 12 1166 1693 132813456 132813992 2.190000e-86 329
9 TraesCS4B01G009100 chr6B 78.229 542 99 12 1166 1693 132822892 132823428 2.190000e-86 329
10 TraesCS4B01G009100 chr1A 78.530 517 81 20 1211 1702 449512223 449511712 2.210000e-81 313
11 TraesCS4B01G009100 chr5D 74.007 831 138 42 1593 2378 42308680 42307883 1.740000e-67 267


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G009100 chr4B 5931523 5934470 2947 True 5445 5445 100.000 1 2948 1 chr4B.!!$R1 2947
1 TraesCS4B01G009100 chr5B 595637417 595640147 2730 False 1190 2204 85.387 34 2549 2 chr5B.!!$F1 2515
2 TraesCS4B01G009100 chr5B 703109988 703110534 546 True 355 355 79.061 1170 1702 1 chr5B.!!$R1 532
3 TraesCS4B01G009100 chr4A 492948181 492948950 769 False 525 525 79.540 949 1706 1 chr4A.!!$F1 757
4 TraesCS4B01G009100 chr4D 96602034 96602882 848 False 512 512 78.231 1156 2012 1 chr4D.!!$F1 856
5 TraesCS4B01G009100 chr6A 564679846 564680382 536 False 340 340 78.598 1166 1693 1 chr6A.!!$F1 527
6 TraesCS4B01G009100 chrUn 334024491 334025024 533 True 329 329 78.293 1169 1693 1 chrUn.!!$R1 524
7 TraesCS4B01G009100 chr6B 132813456 132813992 536 False 329 329 78.229 1166 1693 1 chr6B.!!$F1 527
8 TraesCS4B01G009100 chr6B 132822892 132823428 536 False 329 329 78.229 1166 1693 1 chr6B.!!$F2 527
9 TraesCS4B01G009100 chr1A 449511712 449512223 511 True 313 313 78.530 1211 1702 1 chr1A.!!$R1 491
10 TraesCS4B01G009100 chr5D 42307883 42308680 797 True 267 267 74.007 1593 2378 1 chr5D.!!$R1 785

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
634 845 0.102844 ATGGATGGCGCCGAAAATTG 59.897 50.0 23.9 0.0 0.0 2.32 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2606 2927 0.108138 GTGTAGGTAGGGTGCTGCTG 60.108 60.0 0.0 0.0 0.0 4.41 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 6.949352 ATCGATTGCTCATCCAAATAAACT 57.051 33.333 0.00 0.00 0.00 2.66
25 26 8.087982 GATCGATTGCTCATCCAAATAAACTA 57.912 34.615 0.00 0.00 0.00 2.24
26 27 8.627208 ATCGATTGCTCATCCAAATAAACTAT 57.373 30.769 0.00 0.00 0.00 2.12
27 28 7.864686 TCGATTGCTCATCCAAATAAACTATG 58.135 34.615 0.00 0.00 0.00 2.23
28 29 7.498900 TCGATTGCTCATCCAAATAAACTATGT 59.501 33.333 0.00 0.00 0.00 2.29
29 30 8.131100 CGATTGCTCATCCAAATAAACTATGTT 58.869 33.333 0.00 0.00 0.00 2.71
30 31 9.241317 GATTGCTCATCCAAATAAACTATGTTG 57.759 33.333 0.00 0.00 0.00 3.33
31 32 7.936496 TGCTCATCCAAATAAACTATGTTGA 57.064 32.000 0.00 0.00 0.00 3.18
32 33 8.523915 TGCTCATCCAAATAAACTATGTTGAT 57.476 30.769 0.00 0.00 0.00 2.57
94 95 9.373603 GCTATAGTTCTTCTAGATACAGATCGA 57.626 37.037 0.84 0.00 37.15 3.59
98 99 8.458573 AGTTCTTCTAGATACAGATCGATTGT 57.541 34.615 14.65 14.65 37.15 2.71
108 109 7.935755 AGATACAGATCGATTGTTCATCCAAAT 59.064 33.333 15.21 4.31 37.15 2.32
119 120 9.565213 GATTGTTCATCCAAATAAACTCTCTTG 57.435 33.333 0.00 0.00 0.00 3.02
123 124 7.687941 TCATCCAAATAAACTCTCTTGGTTC 57.312 36.000 0.00 0.00 39.51 3.62
125 126 6.200878 TCCAAATAAACTCTCTTGGTTCCT 57.799 37.500 0.00 0.00 39.51 3.36
140 141 9.892130 CTCTTGGTTCCTCATATTATTATACCC 57.108 37.037 0.00 0.00 0.00 3.69
144 145 8.882282 TGGTTCCTCATATTATTATACCCGAAA 58.118 33.333 0.00 0.00 0.00 3.46
149 150 9.367444 CCTCATATTATTATACCCGAAACACTC 57.633 37.037 0.00 0.00 0.00 3.51
152 153 6.758806 ATTATTATACCCGAAACACTCCCT 57.241 37.500 0.00 0.00 0.00 4.20
153 154 4.684484 ATTATACCCGAAACACTCCCTC 57.316 45.455 0.00 0.00 0.00 4.30
193 194 1.700739 TCGAAAAGAGGCAAGGGGTAA 59.299 47.619 0.00 0.00 0.00 2.85
194 195 2.084546 CGAAAAGAGGCAAGGGGTAAG 58.915 52.381 0.00 0.00 0.00 2.34
195 196 2.447443 GAAAAGAGGCAAGGGGTAAGG 58.553 52.381 0.00 0.00 0.00 2.69
196 197 1.456919 AAAGAGGCAAGGGGTAAGGT 58.543 50.000 0.00 0.00 0.00 3.50
197 198 1.456919 AAGAGGCAAGGGGTAAGGTT 58.543 50.000 0.00 0.00 0.00 3.50
198 199 2.354261 AGAGGCAAGGGGTAAGGTTA 57.646 50.000 0.00 0.00 0.00 2.85
208 209 5.906772 AGGGGTAAGGTTATCGATTCATT 57.093 39.130 1.71 4.39 0.00 2.57
246 456 7.831690 TCAGTTAGTTAAATGATTATGTGGGCA 59.168 33.333 0.00 0.00 35.64 5.36
247 457 8.632679 CAGTTAGTTAAATGATTATGTGGGCAT 58.367 33.333 0.00 0.00 35.07 4.40
264 474 8.615878 TGTGGGCATATGAGTATATTTGTTAC 57.384 34.615 6.97 0.00 0.00 2.50
284 494 9.800433 TTGTTACCAATGCAACATATATCTTTG 57.200 29.630 0.00 0.79 34.78 2.77
285 495 9.183368 TGTTACCAATGCAACATATATCTTTGA 57.817 29.630 0.00 0.00 29.93 2.69
327 537 5.351458 TGGTGTTCATGTCGATTCTATCAG 58.649 41.667 0.00 0.00 0.00 2.90
333 543 6.535274 TCATGTCGATTCTATCAGCATTTG 57.465 37.500 0.00 0.00 0.00 2.32
354 564 4.093743 TGTGTTATCCTCCTTCTGCACTA 58.906 43.478 0.00 0.00 0.00 2.74
355 565 4.716784 TGTGTTATCCTCCTTCTGCACTAT 59.283 41.667 0.00 0.00 0.00 2.12
358 568 1.794714 TCCTCCTTCTGCACTATCCC 58.205 55.000 0.00 0.00 0.00 3.85
371 581 1.771255 ACTATCCCAGATTGCACTCCC 59.229 52.381 0.00 0.00 0.00 4.30
372 582 0.758734 TATCCCAGATTGCACTCCCG 59.241 55.000 0.00 0.00 0.00 5.14
380 590 3.950794 TTGCACTCCCGGATCGCAC 62.951 63.158 0.73 0.00 31.10 5.34
384 595 3.822192 CTCCCGGATCGCACGTGA 61.822 66.667 22.23 0.00 0.00 4.35
388 599 4.470170 CGGATCGCACGTGACGGA 62.470 66.667 22.23 13.21 0.00 4.69
406 617 5.294306 TGACGGACATTTTGCTTCATAGATC 59.706 40.000 0.00 0.00 0.00 2.75
414 625 7.122353 ACATTTTGCTTCATAGATCTCTTGCTT 59.878 33.333 0.00 0.00 0.00 3.91
431 642 3.133118 TGCTTCTTGCATCGGTAAGCAA 61.133 45.455 15.11 0.00 46.84 3.91
458 669 8.975410 TGCTCATCTCTGAATTTAATTGTTTG 57.025 30.769 0.00 0.00 0.00 2.93
462 673 8.579006 TCATCTCTGAATTTAATTGTTTGCACT 58.421 29.630 0.00 0.00 0.00 4.40
478 689 2.743664 TGCACTTGATGAGCATACACAC 59.256 45.455 0.00 0.00 37.35 3.82
482 693 4.093998 CACTTGATGAGCATACACACCTTC 59.906 45.833 0.00 0.00 0.00 3.46
494 705 6.456988 GCATACACACCTTCTATTTCTTTCCG 60.457 42.308 0.00 0.00 0.00 4.30
504 715 9.003658 CCTTCTATTTCTTTCCGTGCATATTAT 57.996 33.333 0.00 0.00 0.00 1.28
568 779 9.853555 TTATGTTTGTTCAAAACATATAGGCTG 57.146 29.630 19.04 0.00 46.35 4.85
569 780 6.155827 TGTTTGTTCAAAACATATAGGCTGC 58.844 36.000 0.00 0.00 41.79 5.25
573 784 7.637631 TGTTCAAAACATATAGGCTGCAATA 57.362 32.000 0.50 0.00 36.25 1.90
586 797 6.705863 AGGCTGCAATATTCTTCCTTTTAG 57.294 37.500 0.50 0.00 0.00 1.85
589 800 5.594317 GCTGCAATATTCTTCCTTTTAGGGA 59.406 40.000 0.00 0.00 35.59 4.20
590 801 6.096846 GCTGCAATATTCTTCCTTTTAGGGAA 59.903 38.462 0.00 0.00 42.39 3.97
599 810 9.997172 ATTCTTCCTTTTAGGGAAATTGAGTAT 57.003 29.630 0.00 0.00 43.74 2.12
600 811 9.462606 TTCTTCCTTTTAGGGAAATTGAGTATC 57.537 33.333 0.00 0.00 43.74 2.24
623 834 5.827797 TCTATGGTTTACAAAGATGGATGGC 59.172 40.000 0.00 0.00 0.00 4.40
627 838 0.813610 TACAAAGATGGATGGCGCCG 60.814 55.000 23.90 5.43 0.00 6.46
630 841 0.679640 AAAGATGGATGGCGCCGAAA 60.680 50.000 23.90 4.21 0.00 3.46
634 845 0.102844 ATGGATGGCGCCGAAAATTG 59.897 50.000 23.90 0.00 0.00 2.32
636 847 0.736053 GGATGGCGCCGAAAATTGTA 59.264 50.000 23.90 0.00 0.00 2.41
637 848 1.133407 GGATGGCGCCGAAAATTGTAA 59.867 47.619 23.90 0.00 0.00 2.41
638 849 2.416162 GGATGGCGCCGAAAATTGTAAA 60.416 45.455 23.90 0.00 0.00 2.01
648 859 6.242829 GCCGAAAATTGTAAAATGCATCTTG 58.757 36.000 0.00 0.00 0.00 3.02
685 896 2.268920 CAGTCATGGACACCCCCG 59.731 66.667 0.00 0.00 34.60 5.73
690 901 2.285818 ATGGACACCCCCGCCTTA 60.286 61.111 0.00 0.00 0.00 2.69
691 902 2.676265 ATGGACACCCCCGCCTTAC 61.676 63.158 0.00 0.00 0.00 2.34
699 923 3.387947 CCCGCCTTACGTCACCCT 61.388 66.667 0.00 0.00 41.42 4.34
705 929 2.223745 GCCTTACGTCACCCTTGAAAA 58.776 47.619 0.00 0.00 31.90 2.29
706 930 2.619646 GCCTTACGTCACCCTTGAAAAA 59.380 45.455 0.00 0.00 31.90 1.94
728 952 7.989416 AAAAACCAATCTACTTATTCGGACA 57.011 32.000 0.00 0.00 0.00 4.02
730 954 6.980051 AACCAATCTACTTATTCGGACAAC 57.020 37.500 0.00 0.00 0.00 3.32
731 955 5.107133 ACCAATCTACTTATTCGGACAACG 58.893 41.667 0.00 0.00 46.11 4.10
732 956 4.506654 CCAATCTACTTATTCGGACAACGG 59.493 45.833 0.00 0.00 44.45 4.44
733 957 3.155093 TCTACTTATTCGGACAACGGC 57.845 47.619 0.00 0.00 44.45 5.68
734 958 2.159198 TCTACTTATTCGGACAACGGCC 60.159 50.000 0.00 0.00 44.45 6.13
735 959 0.322322 ACTTATTCGGACAACGGCCA 59.678 50.000 2.24 0.00 44.45 5.36
736 960 1.065709 ACTTATTCGGACAACGGCCAT 60.066 47.619 2.24 0.00 44.45 4.40
744 968 0.515564 GACAACGGCCATGTGTGTAC 59.484 55.000 15.43 0.00 0.00 2.90
784 1008 9.914834 AAAGGTTAGTTAGGATACAATATTGCA 57.085 29.630 15.48 2.71 41.41 4.08
785 1009 9.914834 AAGGTTAGTTAGGATACAATATTGCAA 57.085 29.630 15.48 0.00 41.41 4.08
786 1010 9.561069 AGGTTAGTTAGGATACAATATTGCAAG 57.439 33.333 15.48 0.00 41.41 4.01
787 1011 9.555727 GGTTAGTTAGGATACAATATTGCAAGA 57.444 33.333 15.48 0.00 41.41 3.02
815 1039 9.753674 AAATTACCCTCAAGATTTCTATGAACA 57.246 29.630 0.00 0.00 0.00 3.18
816 1040 9.753674 AATTACCCTCAAGATTTCTATGAACAA 57.246 29.630 0.00 0.00 0.00 2.83
823 1047 8.099364 TCAAGATTTCTATGAACAAACCACTC 57.901 34.615 0.00 0.00 0.00 3.51
837 1061 6.116126 ACAAACCACTCTATTAGAGAATGGC 58.884 40.000 24.24 0.00 45.07 4.40
846 1070 6.341316 TCTATTAGAGAATGGCTTCACACAC 58.659 40.000 0.00 0.00 33.56 3.82
848 1072 5.738619 TTAGAGAATGGCTTCACACACTA 57.261 39.130 0.00 0.00 33.56 2.74
858 1082 5.418524 TGGCTTCACACACTATGCAATAAAT 59.581 36.000 0.00 0.00 0.00 1.40
860 1084 6.912591 GGCTTCACACACTATGCAATAAATAC 59.087 38.462 0.00 0.00 0.00 1.89
864 1088 6.478673 TCACACACTATGCAATAAATACGGAG 59.521 38.462 0.00 0.00 0.00 4.63
865 1089 6.478673 CACACACTATGCAATAAATACGGAGA 59.521 38.462 0.00 0.00 0.00 3.71
868 1092 7.384932 CACACTATGCAATAAATACGGAGATGA 59.615 37.037 0.00 0.00 0.00 2.92
871 1095 6.791887 ATGCAATAAATACGGAGATGACAG 57.208 37.500 0.00 0.00 0.00 3.51
879 1103 6.388435 AATACGGAGATGACAGTACTAACC 57.612 41.667 0.00 0.00 0.00 2.85
880 1104 3.965694 ACGGAGATGACAGTACTAACCT 58.034 45.455 0.00 0.00 0.00 3.50
884 1108 6.606395 ACGGAGATGACAGTACTAACCTATTT 59.394 38.462 0.00 0.00 0.00 1.40
896 1120 7.876582 AGTACTAACCTATTTGTTGTTCCTCAC 59.123 37.037 0.00 0.00 0.00 3.51
909 1133 6.653526 TTGTTCCTCACAATGTCATTTGAT 57.346 33.333 0.00 0.00 40.71 2.57
912 1136 4.665451 TCCTCACAATGTCATTTGATGGT 58.335 39.130 0.00 0.00 0.00 3.55
920 1144 5.918426 ATGTCATTTGATGGTATGTGCAA 57.082 34.783 0.00 0.00 0.00 4.08
941 1165 9.214953 GTGCAAATATCTTTTCAAGTAGAATCG 57.785 33.333 0.00 0.00 35.83 3.34
942 1166 7.910162 TGCAAATATCTTTTCAAGTAGAATCGC 59.090 33.333 0.00 0.00 35.83 4.58
1029 1253 3.505480 AATGCTGGATCATCCTCTTCC 57.495 47.619 4.96 0.00 37.46 3.46
1042 1266 1.202770 CCTCTTCCCCAAGTGAAACGT 60.203 52.381 0.00 0.00 45.86 3.99
1046 1270 1.961793 TCCCCAAGTGAAACGTTCAG 58.038 50.000 0.00 0.00 45.86 3.02
1089 1313 8.958119 TGGAATGTCTCTATATTACACCAAAC 57.042 34.615 0.00 0.00 0.00 2.93
1127 1351 2.092968 TGCCTGAGTATCACATTCACCC 60.093 50.000 0.00 0.00 42.56 4.61
1136 1360 6.143915 AGTATCACATTCACCCTACATACCT 58.856 40.000 0.00 0.00 0.00 3.08
1144 1368 2.569853 CACCCTACATACCTGTCCACAA 59.430 50.000 0.00 0.00 36.79 3.33
1234 1458 7.546358 TGTCAAAAAGAAAAGCTTCTCAATCA 58.454 30.769 1.97 0.00 41.23 2.57
1239 1463 7.761651 AAAGAAAAGCTTCTCAATCAACAAC 57.238 32.000 1.97 0.00 41.23 3.32
1245 1469 3.291585 CTTCTCAATCAACAACGCACAC 58.708 45.455 0.00 0.00 0.00 3.82
1390 1634 3.266513 TGATGACCCATCCATCTTCAACA 59.733 43.478 0.00 0.00 39.87 3.33
1422 1666 3.624777 AGAGGTTTGCCATGAATACCAG 58.375 45.455 0.00 0.00 37.19 4.00
1460 1706 2.098607 TCTATCTAAACACCGCTGACCG 59.901 50.000 0.00 0.00 0.00 4.79
1532 1779 0.912486 ACTACACATCCCTCTTGCCC 59.088 55.000 0.00 0.00 0.00 5.36
1545 1792 1.718757 CTTGCCCAGGCGCAACTATC 61.719 60.000 10.83 0.00 43.65 2.08
1546 1793 2.124736 GCCCAGGCGCAACTATCA 60.125 61.111 10.83 0.00 0.00 2.15
1552 1799 1.394917 CAGGCGCAACTATCAACACTC 59.605 52.381 10.83 0.00 0.00 3.51
1710 1972 5.222130 ACCACCAACAAAGAGAGGTATGAAT 60.222 40.000 0.00 0.00 32.01 2.57
1714 1976 7.493971 CACCAACAAAGAGAGGTATGAATAGAG 59.506 40.741 0.00 0.00 32.01 2.43
1784 2046 3.644966 TGTCACAGTCAAAAGGAGGTT 57.355 42.857 0.00 0.00 0.00 3.50
1836 2098 6.255453 TCAAGTTGTCAAAAAGCATAAGCAAC 59.745 34.615 2.11 0.00 45.49 4.17
1840 2121 6.384258 TGTCAAAAAGCATAAGCAACAGTA 57.616 33.333 0.00 0.00 45.49 2.74
1841 2122 6.980593 TGTCAAAAAGCATAAGCAACAGTAT 58.019 32.000 0.00 0.00 45.49 2.12
1842 2123 6.862608 TGTCAAAAAGCATAAGCAACAGTATG 59.137 34.615 0.00 0.00 45.49 2.39
1922 2204 3.076621 TGTTCTCTAACAGCAATGCAGG 58.923 45.455 8.35 1.12 40.69 4.85
1923 2205 3.244526 TGTTCTCTAACAGCAATGCAGGA 60.245 43.478 8.35 0.00 40.69 3.86
1941 2223 5.221481 TGCAGGAAACAACATGACAATGAAT 60.221 36.000 0.00 0.00 37.24 2.57
1943 2225 6.529125 GCAGGAAACAACATGACAATGAATAG 59.471 38.462 0.00 0.00 37.24 1.73
1951 2233 9.013229 ACAACATGACAATGAATAGCTAAGAAA 57.987 29.630 0.00 0.00 37.24 2.52
1968 2250 3.956744 AGAAAGGCCAAGAGGATAACAC 58.043 45.455 5.01 0.00 36.89 3.32
1970 2252 0.541863 AGGCCAAGAGGATAACACCG 59.458 55.000 5.01 0.00 36.89 4.94
2008 2291 5.049405 GGTACTGTCAGTTTCATGTCCAAAG 60.049 44.000 11.54 0.00 0.00 2.77
2015 2298 7.492020 TGTCAGTTTCATGTCCAAAGAAAATTG 59.508 33.333 0.00 0.00 33.54 2.32
2019 2302 5.119931 TCATGTCCAAAGAAAATTGTCCG 57.880 39.130 0.00 0.00 0.00 4.79
2031 2314 8.631480 AAGAAAATTGTCCGAAAGTTAGGTAT 57.369 30.769 0.00 0.00 0.00 2.73
2032 2315 8.040716 AGAAAATTGTCCGAAAGTTAGGTATG 57.959 34.615 0.00 0.00 0.00 2.39
2038 2345 5.105877 TGTCCGAAAGTTAGGTATGTCTCTG 60.106 44.000 0.00 0.00 0.00 3.35
2047 2354 2.035632 GGTATGTCTCTGCTAGCCTGT 58.964 52.381 13.29 0.00 0.00 4.00
2062 2369 5.070580 GCTAGCCTGTTTAGAGGAGGATAAA 59.929 44.000 2.29 0.00 34.69 1.40
2068 2375 8.594550 GCCTGTTTAGAGGAGGATAAATGTATA 58.405 37.037 0.00 0.00 34.69 1.47
2102 2410 9.359653 AGCTCTTTTTACAATATGCAGGATATT 57.640 29.630 1.36 1.36 37.68 1.28
2149 2457 6.560253 ACAAACTACACTGCCTTCTATTTG 57.440 37.500 0.00 0.00 0.00 2.32
2155 2463 8.494016 ACTACACTGCCTTCTATTTGAATTAC 57.506 34.615 0.00 0.00 33.71 1.89
2159 2467 8.947115 ACACTGCCTTCTATTTGAATTACTTAC 58.053 33.333 0.00 0.00 33.71 2.34
2184 2499 9.461312 ACATTGTGGCTTTAATTGTAATCTCTA 57.539 29.630 0.00 0.00 0.00 2.43
2211 2526 4.467198 AGTAGTACTTTTGGGTGATCCG 57.533 45.455 0.00 0.00 38.76 4.18
2259 2574 3.621715 GCTTATGCAACTATATACGGGCC 59.378 47.826 0.00 0.00 39.41 5.80
2275 2590 1.111277 GGCCGGATTACATTGCCTTT 58.889 50.000 5.05 0.00 39.05 3.11
2282 2597 7.151976 GCCGGATTACATTGCCTTTTATTTAT 58.848 34.615 5.05 0.00 0.00 1.40
2315 2630 3.624326 TGTGGCTCACTTTTTCAATCG 57.376 42.857 6.83 0.00 35.11 3.34
2316 2631 2.287547 TGTGGCTCACTTTTTCAATCGC 60.288 45.455 6.83 0.00 35.11 4.58
2317 2632 1.069296 TGGCTCACTTTTTCAATCGCG 60.069 47.619 0.00 0.00 0.00 5.87
2318 2633 1.069227 GGCTCACTTTTTCAATCGCGT 60.069 47.619 5.77 0.00 0.00 6.01
2319 2634 1.971962 GCTCACTTTTTCAATCGCGTG 59.028 47.619 5.77 0.00 0.00 5.34
2351 2667 9.690913 ATTGGTAATTACATGATGATCCTATGG 57.309 33.333 17.16 0.00 0.00 2.74
2360 2676 6.070366 ACATGATGATCCTATGGATGTAGTGG 60.070 42.308 0.00 0.00 43.27 4.00
2364 2680 4.019950 TGATCCTATGGATGTAGTGGCATG 60.020 45.833 3.57 0.00 43.27 4.06
2367 2683 1.683943 ATGGATGTAGTGGCATGTGC 58.316 50.000 0.00 0.00 41.14 4.57
2371 2687 3.213506 GGATGTAGTGGCATGTGCATTA 58.786 45.455 7.36 0.00 44.36 1.90
2381 2697 6.379703 AGTGGCATGTGCATTAACCTTAATTA 59.620 34.615 7.36 0.00 44.36 1.40
2402 2718 8.782137 AATTATGAGGTATATGGGTTGCTTTT 57.218 30.769 0.00 0.00 0.00 2.27
2419 2735 8.031277 GGTTGCTTTTCACTTTATTGAGATGAT 58.969 33.333 0.00 0.00 0.00 2.45
2515 2836 8.895737 GGATAGGTTATGTCAAAATTTTCGGTA 58.104 33.333 0.00 0.00 0.00 4.02
2545 2866 7.088589 ACTTCCAAAATCTTGATTACATCCG 57.911 36.000 0.00 0.00 34.14 4.18
2549 2870 8.153479 TCCAAAATCTTGATTACATCCGTATG 57.847 34.615 0.00 0.00 35.45 2.39
2550 2871 7.990314 TCCAAAATCTTGATTACATCCGTATGA 59.010 33.333 0.00 0.00 34.31 2.15
2551 2872 8.620416 CCAAAATCTTGATTACATCCGTATGAA 58.380 33.333 0.00 0.00 34.31 2.57
2554 2875 9.559732 AAATCTTGATTACATCCGTATGAATGA 57.440 29.630 0.00 0.00 36.54 2.57
2555 2876 9.559732 AATCTTGATTACATCCGTATGAATGAA 57.440 29.630 0.00 0.00 36.54 2.57
2556 2877 8.365399 TCTTGATTACATCCGTATGAATGAAC 57.635 34.615 0.00 0.00 36.54 3.18
2557 2878 7.441157 TCTTGATTACATCCGTATGAATGAACC 59.559 37.037 0.00 0.00 36.54 3.62
2558 2879 6.826668 TGATTACATCCGTATGAATGAACCT 58.173 36.000 0.00 0.00 36.54 3.50
2559 2880 7.958088 TGATTACATCCGTATGAATGAACCTA 58.042 34.615 0.00 0.00 36.54 3.08
2560 2881 7.870954 TGATTACATCCGTATGAATGAACCTAC 59.129 37.037 0.00 0.00 36.54 3.18
2561 2882 4.957296 ACATCCGTATGAATGAACCTACC 58.043 43.478 0.00 0.00 36.54 3.18
2562 2883 4.407621 ACATCCGTATGAATGAACCTACCA 59.592 41.667 0.00 0.00 36.54 3.25
2563 2884 5.104693 ACATCCGTATGAATGAACCTACCAA 60.105 40.000 0.00 0.00 36.54 3.67
2564 2885 5.423704 TCCGTATGAATGAACCTACCAAA 57.576 39.130 0.00 0.00 0.00 3.28
2565 2886 5.806818 TCCGTATGAATGAACCTACCAAAA 58.193 37.500 0.00 0.00 0.00 2.44
2566 2887 6.419791 TCCGTATGAATGAACCTACCAAAAT 58.580 36.000 0.00 0.00 0.00 1.82
2567 2888 6.887545 TCCGTATGAATGAACCTACCAAAATT 59.112 34.615 0.00 0.00 0.00 1.82
2568 2889 7.394923 TCCGTATGAATGAACCTACCAAAATTT 59.605 33.333 0.00 0.00 0.00 1.82
2569 2890 8.032451 CCGTATGAATGAACCTACCAAAATTTT 58.968 33.333 0.00 0.00 0.00 1.82
2578 2899 9.699703 TGAACCTACCAAAATTTTATAGCAAAC 57.300 29.630 2.44 2.66 0.00 2.93
2579 2900 9.146984 GAACCTACCAAAATTTTATAGCAAACC 57.853 33.333 2.44 0.00 0.00 3.27
2580 2901 8.196378 ACCTACCAAAATTTTATAGCAAACCA 57.804 30.769 2.44 0.00 0.00 3.67
2581 2902 8.652290 ACCTACCAAAATTTTATAGCAAACCAA 58.348 29.630 2.44 0.00 0.00 3.67
2582 2903 8.931775 CCTACCAAAATTTTATAGCAAACCAAC 58.068 33.333 2.44 0.00 0.00 3.77
2583 2904 9.482627 CTACCAAAATTTTATAGCAAACCAACA 57.517 29.630 2.44 0.00 0.00 3.33
2584 2905 8.738645 ACCAAAATTTTATAGCAAACCAACAA 57.261 26.923 2.44 0.00 0.00 2.83
2585 2906 8.616942 ACCAAAATTTTATAGCAAACCAACAAC 58.383 29.630 2.44 0.00 0.00 3.32
2586 2907 8.835439 CCAAAATTTTATAGCAAACCAACAACT 58.165 29.630 2.44 0.00 0.00 3.16
2596 2917 9.908152 ATAGCAAACCAACAACTAAACTAAATC 57.092 29.630 0.00 0.00 0.00 2.17
2597 2918 7.777095 AGCAAACCAACAACTAAACTAAATCA 58.223 30.769 0.00 0.00 0.00 2.57
2598 2919 8.421002 AGCAAACCAACAACTAAACTAAATCAT 58.579 29.630 0.00 0.00 0.00 2.45
2599 2920 9.685828 GCAAACCAACAACTAAACTAAATCATA 57.314 29.630 0.00 0.00 0.00 2.15
2612 2933 8.649973 AAACTAAATCATACTACTACAGCAGC 57.350 34.615 0.00 0.00 0.00 5.25
2613 2934 7.348080 ACTAAATCATACTACTACAGCAGCA 57.652 36.000 0.00 0.00 0.00 4.41
2614 2935 7.203910 ACTAAATCATACTACTACAGCAGCAC 58.796 38.462 0.00 0.00 0.00 4.40
2615 2936 4.592485 ATCATACTACTACAGCAGCACC 57.408 45.455 0.00 0.00 0.00 5.01
2616 2937 2.693591 TCATACTACTACAGCAGCACCC 59.306 50.000 0.00 0.00 0.00 4.61
2617 2938 2.526888 TACTACTACAGCAGCACCCT 57.473 50.000 0.00 0.00 0.00 4.34
2618 2939 2.526888 ACTACTACAGCAGCACCCTA 57.473 50.000 0.00 0.00 0.00 3.53
2619 2940 2.100989 ACTACTACAGCAGCACCCTAC 58.899 52.381 0.00 0.00 0.00 3.18
2620 2941 1.409427 CTACTACAGCAGCACCCTACC 59.591 57.143 0.00 0.00 0.00 3.18
2621 2942 0.252284 ACTACAGCAGCACCCTACCT 60.252 55.000 0.00 0.00 0.00 3.08
2622 2943 1.006758 ACTACAGCAGCACCCTACCTA 59.993 52.381 0.00 0.00 0.00 3.08
2623 2944 1.409427 CTACAGCAGCACCCTACCTAC 59.591 57.143 0.00 0.00 0.00 3.18
2624 2945 0.544357 ACAGCAGCACCCTACCTACA 60.544 55.000 0.00 0.00 0.00 2.74
2625 2946 0.108138 CAGCAGCACCCTACCTACAC 60.108 60.000 0.00 0.00 0.00 2.90
2626 2947 0.252284 AGCAGCACCCTACCTACACT 60.252 55.000 0.00 0.00 0.00 3.55
2627 2948 1.006758 AGCAGCACCCTACCTACACTA 59.993 52.381 0.00 0.00 0.00 2.74
2628 2949 1.829222 GCAGCACCCTACCTACACTAA 59.171 52.381 0.00 0.00 0.00 2.24
2629 2950 2.159085 GCAGCACCCTACCTACACTAAG 60.159 54.545 0.00 0.00 0.00 2.18
2630 2951 2.431057 CAGCACCCTACCTACACTAAGG 59.569 54.545 0.00 0.00 42.82 2.69
2631 2952 1.138464 GCACCCTACCTACACTAAGGC 59.862 57.143 0.00 0.00 40.62 4.35
2632 2953 1.761198 CACCCTACCTACACTAAGGCC 59.239 57.143 0.00 0.00 40.62 5.19
2633 2954 1.363629 ACCCTACCTACACTAAGGCCA 59.636 52.381 5.01 0.00 40.62 5.36
2634 2955 2.225701 ACCCTACCTACACTAAGGCCAA 60.226 50.000 5.01 0.00 40.62 4.52
2635 2956 2.434702 CCCTACCTACACTAAGGCCAAG 59.565 54.545 5.01 4.21 40.62 3.61
2636 2957 2.158943 CCTACCTACACTAAGGCCAAGC 60.159 54.545 5.01 0.00 40.62 4.01
2637 2958 1.358152 ACCTACACTAAGGCCAAGCA 58.642 50.000 5.01 0.00 40.62 3.91
2638 2959 1.279271 ACCTACACTAAGGCCAAGCAG 59.721 52.381 5.01 0.98 40.62 4.24
2639 2960 1.373570 CTACACTAAGGCCAAGCAGC 58.626 55.000 5.01 0.00 0.00 5.25
2640 2961 0.690192 TACACTAAGGCCAAGCAGCA 59.310 50.000 5.01 0.00 0.00 4.41
2641 2962 0.607489 ACACTAAGGCCAAGCAGCAG 60.607 55.000 5.01 0.00 0.00 4.24
2642 2963 1.001641 ACTAAGGCCAAGCAGCAGG 60.002 57.895 5.01 0.00 0.00 4.85
2643 2964 1.001641 CTAAGGCCAAGCAGCAGGT 60.002 57.895 5.01 0.00 0.00 4.00
2644 2965 1.303561 TAAGGCCAAGCAGCAGGTG 60.304 57.895 5.01 0.00 0.00 4.00
2654 2975 1.432251 CAGCAGGTGCATAGCAAGC 59.568 57.895 4.48 0.00 41.47 4.01
2655 2976 1.001764 AGCAGGTGCATAGCAAGCA 60.002 52.632 4.48 0.00 41.47 3.91
2656 2977 0.395311 AGCAGGTGCATAGCAAGCAT 60.395 50.000 4.48 0.00 44.79 3.79
2657 2978 0.248907 GCAGGTGCATAGCAAGCATG 60.249 55.000 0.00 0.00 44.79 4.06
2658 2979 0.384309 CAGGTGCATAGCAAGCATGG 59.616 55.000 0.00 0.00 44.79 3.66
2659 2980 0.256752 AGGTGCATAGCAAGCATGGA 59.743 50.000 0.00 0.00 44.79 3.41
2660 2981 1.105457 GGTGCATAGCAAGCATGGAA 58.895 50.000 0.00 0.00 44.79 3.53
2661 2982 1.202336 GGTGCATAGCAAGCATGGAAC 60.202 52.381 0.00 0.00 44.79 3.62
2662 2983 1.473677 GTGCATAGCAAGCATGGAACA 59.526 47.619 0.00 0.00 44.79 3.18
2663 2984 1.473677 TGCATAGCAAGCATGGAACAC 59.526 47.619 0.00 0.00 36.87 3.32
2664 2985 4.079434 TGCATAGCAAGCATGGAACACG 62.079 50.000 0.00 0.00 36.87 4.49
2673 2994 3.124686 TGGAACACGCAAAAGGCC 58.875 55.556 0.00 0.00 40.31 5.19
2674 2995 1.754621 TGGAACACGCAAAAGGCCA 60.755 52.632 5.01 0.00 40.31 5.36
2675 2996 1.323271 TGGAACACGCAAAAGGCCAA 61.323 50.000 5.01 0.00 40.31 4.52
2676 2997 0.597377 GGAACACGCAAAAGGCCAAG 60.597 55.000 5.01 0.00 40.31 3.61
2677 2998 0.383949 GAACACGCAAAAGGCCAAGA 59.616 50.000 5.01 0.00 40.31 3.02
2678 2999 1.000274 GAACACGCAAAAGGCCAAGAT 60.000 47.619 5.01 0.00 40.31 2.40
2679 3000 0.598065 ACACGCAAAAGGCCAAGATC 59.402 50.000 5.01 0.00 40.31 2.75
2680 3001 0.109132 CACGCAAAAGGCCAAGATCC 60.109 55.000 5.01 0.00 40.31 3.36
2681 3002 0.539438 ACGCAAAAGGCCAAGATCCA 60.539 50.000 5.01 0.00 40.31 3.41
2682 3003 0.602562 CGCAAAAGGCCAAGATCCAA 59.397 50.000 5.01 0.00 40.31 3.53
2683 3004 1.000731 CGCAAAAGGCCAAGATCCAAA 59.999 47.619 5.01 0.00 40.31 3.28
2684 3005 2.691927 GCAAAAGGCCAAGATCCAAAG 58.308 47.619 5.01 0.00 36.11 2.77
2685 3006 2.299867 GCAAAAGGCCAAGATCCAAAGA 59.700 45.455 5.01 0.00 36.11 2.52
2686 3007 3.615834 GCAAAAGGCCAAGATCCAAAGAG 60.616 47.826 5.01 0.00 36.11 2.85
2687 3008 1.844687 AAGGCCAAGATCCAAAGAGC 58.155 50.000 5.01 0.00 0.00 4.09
2688 3009 0.700564 AGGCCAAGATCCAAAGAGCA 59.299 50.000 5.01 0.00 0.00 4.26
2689 3010 1.101331 GGCCAAGATCCAAAGAGCAG 58.899 55.000 0.00 0.00 0.00 4.24
2690 3011 1.615384 GGCCAAGATCCAAAGAGCAGT 60.615 52.381 0.00 0.00 0.00 4.40
2691 3012 1.742268 GCCAAGATCCAAAGAGCAGTC 59.258 52.381 0.00 0.00 0.00 3.51
2692 3013 2.617532 GCCAAGATCCAAAGAGCAGTCT 60.618 50.000 0.00 0.00 32.81 3.24
2693 3014 3.369892 GCCAAGATCCAAAGAGCAGTCTA 60.370 47.826 0.00 0.00 30.45 2.59
2694 3015 4.187694 CCAAGATCCAAAGAGCAGTCTAC 58.812 47.826 0.00 0.00 30.45 2.59
2695 3016 4.187694 CAAGATCCAAAGAGCAGTCTACC 58.812 47.826 0.00 0.00 30.45 3.18
2696 3017 3.445008 AGATCCAAAGAGCAGTCTACCA 58.555 45.455 0.00 0.00 30.45 3.25
2697 3018 3.840666 AGATCCAAAGAGCAGTCTACCAA 59.159 43.478 0.00 0.00 30.45 3.67
2698 3019 3.685139 TCCAAAGAGCAGTCTACCAAG 57.315 47.619 0.00 0.00 30.45 3.61
2699 3020 2.972713 TCCAAAGAGCAGTCTACCAAGT 59.027 45.455 0.00 0.00 30.45 3.16
2700 3021 3.070018 CCAAAGAGCAGTCTACCAAGTG 58.930 50.000 0.00 0.00 30.45 3.16
2701 3022 3.495100 CCAAAGAGCAGTCTACCAAGTGT 60.495 47.826 0.00 0.00 30.45 3.55
2702 3023 4.130118 CAAAGAGCAGTCTACCAAGTGTT 58.870 43.478 0.00 0.00 30.45 3.32
2703 3024 4.423625 AAGAGCAGTCTACCAAGTGTTT 57.576 40.909 0.00 0.00 30.45 2.83
2704 3025 3.733337 AGAGCAGTCTACCAAGTGTTTG 58.267 45.455 0.00 0.00 0.00 2.93
2705 3026 3.134804 AGAGCAGTCTACCAAGTGTTTGT 59.865 43.478 0.00 0.00 32.21 2.83
2706 3027 3.877508 GAGCAGTCTACCAAGTGTTTGTT 59.122 43.478 0.00 0.00 32.21 2.83
2707 3028 4.270008 AGCAGTCTACCAAGTGTTTGTTT 58.730 39.130 0.00 0.00 32.21 2.83
2708 3029 4.096382 AGCAGTCTACCAAGTGTTTGTTTG 59.904 41.667 0.00 0.00 32.21 2.93
2709 3030 4.142469 GCAGTCTACCAAGTGTTTGTTTGT 60.142 41.667 0.00 0.00 32.21 2.83
2710 3031 5.621329 GCAGTCTACCAAGTGTTTGTTTGTT 60.621 40.000 0.00 0.00 32.21 2.83
2711 3032 6.386654 CAGTCTACCAAGTGTTTGTTTGTTT 58.613 36.000 0.00 0.00 32.21 2.83
2712 3033 6.866248 CAGTCTACCAAGTGTTTGTTTGTTTT 59.134 34.615 0.00 0.00 32.21 2.43
2713 3034 7.061789 CAGTCTACCAAGTGTTTGTTTGTTTTC 59.938 37.037 0.00 0.00 32.21 2.29
2714 3035 6.864165 GTCTACCAAGTGTTTGTTTGTTTTCA 59.136 34.615 0.00 0.00 32.21 2.69
2715 3036 7.544217 GTCTACCAAGTGTTTGTTTGTTTTCAT 59.456 33.333 0.00 0.00 32.21 2.57
2716 3037 6.479095 ACCAAGTGTTTGTTTGTTTTCATG 57.521 33.333 0.00 0.00 32.21 3.07
2717 3038 6.226787 ACCAAGTGTTTGTTTGTTTTCATGA 58.773 32.000 0.00 0.00 32.21 3.07
2718 3039 6.878389 ACCAAGTGTTTGTTTGTTTTCATGAT 59.122 30.769 0.00 0.00 32.21 2.45
2719 3040 7.390162 ACCAAGTGTTTGTTTGTTTTCATGATT 59.610 29.630 0.00 0.00 32.21 2.57
2720 3041 8.235905 CCAAGTGTTTGTTTGTTTTCATGATTT 58.764 29.630 0.00 0.00 32.21 2.17
2721 3042 9.609950 CAAGTGTTTGTTTGTTTTCATGATTTT 57.390 25.926 0.00 0.00 0.00 1.82
2722 3043 9.824534 AAGTGTTTGTTTGTTTTCATGATTTTC 57.175 25.926 0.00 0.00 0.00 2.29
2723 3044 8.450180 AGTGTTTGTTTGTTTTCATGATTTTCC 58.550 29.630 0.00 0.00 0.00 3.13
2724 3045 8.233190 GTGTTTGTTTGTTTTCATGATTTTCCA 58.767 29.630 0.00 0.00 0.00 3.53
2725 3046 8.233190 TGTTTGTTTGTTTTCATGATTTTCCAC 58.767 29.630 0.00 0.00 0.00 4.02
2726 3047 7.912056 TTGTTTGTTTTCATGATTTTCCACA 57.088 28.000 0.00 0.00 0.00 4.17
2727 3048 8.503458 TTGTTTGTTTTCATGATTTTCCACAT 57.497 26.923 0.00 0.00 0.00 3.21
2728 3049 8.503458 TGTTTGTTTTCATGATTTTCCACATT 57.497 26.923 0.00 0.00 0.00 2.71
2729 3050 8.954350 TGTTTGTTTTCATGATTTTCCACATTT 58.046 25.926 0.00 0.00 0.00 2.32
2733 3054 9.993454 TGTTTTCATGATTTTCCACATTTATCA 57.007 25.926 0.00 0.00 0.00 2.15
2737 3058 8.651391 TCATGATTTTCCACATTTATCATTGC 57.349 30.769 0.00 0.00 34.61 3.56
2738 3059 8.258708 TCATGATTTTCCACATTTATCATTGCA 58.741 29.630 0.00 0.00 34.61 4.08
2739 3060 8.547894 CATGATTTTCCACATTTATCATTGCAG 58.452 33.333 0.00 0.00 34.61 4.41
2740 3061 7.838884 TGATTTTCCACATTTATCATTGCAGA 58.161 30.769 0.00 0.00 0.00 4.26
2741 3062 8.312564 TGATTTTCCACATTTATCATTGCAGAA 58.687 29.630 0.00 0.00 0.00 3.02
2742 3063 9.153721 GATTTTCCACATTTATCATTGCAGAAA 57.846 29.630 0.00 0.00 0.00 2.52
2743 3064 7.887996 TTTCCACATTTATCATTGCAGAAAC 57.112 32.000 0.00 0.00 0.00 2.78
2744 3065 6.839124 TCCACATTTATCATTGCAGAAACT 57.161 33.333 0.00 0.00 0.00 2.66
2745 3066 6.855836 TCCACATTTATCATTGCAGAAACTC 58.144 36.000 0.00 0.00 0.00 3.01
2746 3067 6.660521 TCCACATTTATCATTGCAGAAACTCT 59.339 34.615 0.00 0.00 0.00 3.24
2747 3068 7.177216 TCCACATTTATCATTGCAGAAACTCTT 59.823 33.333 0.00 0.00 0.00 2.85
2748 3069 8.461222 CCACATTTATCATTGCAGAAACTCTTA 58.539 33.333 0.00 0.00 0.00 2.10
2751 3072 9.674824 CATTTATCATTGCAGAAACTCTTATCC 57.325 33.333 0.00 0.00 0.00 2.59
2752 3073 8.806429 TTTATCATTGCAGAAACTCTTATCCA 57.194 30.769 0.00 0.00 0.00 3.41
2753 3074 6.690194 ATCATTGCAGAAACTCTTATCCAC 57.310 37.500 0.00 0.00 0.00 4.02
2754 3075 5.559770 TCATTGCAGAAACTCTTATCCACA 58.440 37.500 0.00 0.00 0.00 4.17
2755 3076 6.003326 TCATTGCAGAAACTCTTATCCACAA 58.997 36.000 0.00 0.00 0.00 3.33
2756 3077 6.489700 TCATTGCAGAAACTCTTATCCACAAA 59.510 34.615 0.00 0.00 0.00 2.83
2757 3078 6.899393 TTGCAGAAACTCTTATCCACAAAT 57.101 33.333 0.00 0.00 0.00 2.32
2758 3079 6.899393 TGCAGAAACTCTTATCCACAAATT 57.101 33.333 0.00 0.00 0.00 1.82
2759 3080 6.913170 TGCAGAAACTCTTATCCACAAATTC 58.087 36.000 0.00 0.00 0.00 2.17
2760 3081 6.071952 TGCAGAAACTCTTATCCACAAATTCC 60.072 38.462 0.00 0.00 0.00 3.01
2761 3082 6.625960 GCAGAAACTCTTATCCACAAATTCCC 60.626 42.308 0.00 0.00 0.00 3.97
2762 3083 5.648092 AGAAACTCTTATCCACAAATTCCCG 59.352 40.000 0.00 0.00 0.00 5.14
2763 3084 3.279434 ACTCTTATCCACAAATTCCCGC 58.721 45.455 0.00 0.00 0.00 6.13
2764 3085 3.278574 CTCTTATCCACAAATTCCCGCA 58.721 45.455 0.00 0.00 0.00 5.69
2765 3086 3.278574 TCTTATCCACAAATTCCCGCAG 58.721 45.455 0.00 0.00 0.00 5.18
2766 3087 2.799126 TATCCACAAATTCCCGCAGT 57.201 45.000 0.00 0.00 0.00 4.40
2767 3088 2.799126 ATCCACAAATTCCCGCAGTA 57.201 45.000 0.00 0.00 0.00 2.74
2768 3089 2.570415 TCCACAAATTCCCGCAGTAA 57.430 45.000 0.00 0.00 0.00 2.24
2769 3090 2.156098 TCCACAAATTCCCGCAGTAAC 58.844 47.619 0.00 0.00 0.00 2.50
2770 3091 1.135803 CCACAAATTCCCGCAGTAACG 60.136 52.381 0.00 0.00 0.00 3.18
2771 3092 0.519961 ACAAATTCCCGCAGTAACGC 59.480 50.000 0.00 0.00 0.00 4.84
2779 3100 4.799824 GCAGTAACGCGCGGGGTA 62.800 66.667 35.22 22.94 0.00 3.69
2780 3101 2.882301 CAGTAACGCGCGGGGTAC 60.882 66.667 35.86 35.86 0.00 3.34
2805 3126 9.261180 ACCATCTAGTTATCAACAATAATGACG 57.739 33.333 0.00 0.00 32.53 4.35
2806 3127 8.223769 CCATCTAGTTATCAACAATAATGACGC 58.776 37.037 0.00 0.00 32.53 5.19
2807 3128 8.982685 CATCTAGTTATCAACAATAATGACGCT 58.017 33.333 0.00 0.00 32.53 5.07
2812 3133 9.325198 AGTTATCAACAATAATGACGCTATTCA 57.675 29.630 0.00 0.00 32.53 2.57
2813 3134 9.929722 GTTATCAACAATAATGACGCTATTCAA 57.070 29.630 0.00 0.00 32.53 2.69
2815 3136 7.841915 TCAACAATAATGACGCTATTCAAGA 57.158 32.000 0.00 0.00 0.00 3.02
2816 3137 8.262715 TCAACAATAATGACGCTATTCAAGAA 57.737 30.769 0.00 0.00 0.00 2.52
2817 3138 8.390354 TCAACAATAATGACGCTATTCAAGAAG 58.610 33.333 0.00 0.00 0.00 2.85
2818 3139 8.390354 CAACAATAATGACGCTATTCAAGAAGA 58.610 33.333 0.00 0.00 0.00 2.87
2819 3140 8.136057 ACAATAATGACGCTATTCAAGAAGAG 57.864 34.615 0.27 0.27 33.10 2.85
2820 3141 7.225538 ACAATAATGACGCTATTCAAGAAGAGG 59.774 37.037 6.58 0.41 30.78 3.69
2821 3142 4.744795 ATGACGCTATTCAAGAAGAGGT 57.255 40.909 6.58 3.22 30.78 3.85
2822 3143 5.854010 ATGACGCTATTCAAGAAGAGGTA 57.146 39.130 6.58 0.00 30.78 3.08
2823 3144 5.250235 TGACGCTATTCAAGAAGAGGTAG 57.750 43.478 6.58 0.00 30.78 3.18
2824 3145 4.948004 TGACGCTATTCAAGAAGAGGTAGA 59.052 41.667 6.58 0.00 30.78 2.59
2825 3146 5.417894 TGACGCTATTCAAGAAGAGGTAGAA 59.582 40.000 6.58 0.00 30.78 2.10
2826 3147 6.071560 TGACGCTATTCAAGAAGAGGTAGAAA 60.072 38.462 6.58 0.00 30.78 2.52
2827 3148 6.100668 ACGCTATTCAAGAAGAGGTAGAAAC 58.899 40.000 6.58 0.00 30.78 2.78
2828 3149 6.071278 ACGCTATTCAAGAAGAGGTAGAAACT 60.071 38.462 6.58 0.00 30.78 2.66
2829 3150 6.254589 CGCTATTCAAGAAGAGGTAGAAACTG 59.745 42.308 6.58 0.00 30.78 3.16
2830 3151 7.100409 GCTATTCAAGAAGAGGTAGAAACTGT 58.900 38.462 6.58 0.00 30.78 3.55
2831 3152 7.276878 GCTATTCAAGAAGAGGTAGAAACTGTC 59.723 40.741 6.58 0.00 30.78 3.51
2832 3153 6.479972 TTCAAGAAGAGGTAGAAACTGTCA 57.520 37.500 0.00 0.00 0.00 3.58
2833 3154 6.479972 TCAAGAAGAGGTAGAAACTGTCAA 57.520 37.500 0.00 0.00 0.00 3.18
2834 3155 7.067496 TCAAGAAGAGGTAGAAACTGTCAAT 57.933 36.000 0.00 0.00 0.00 2.57
2835 3156 6.931281 TCAAGAAGAGGTAGAAACTGTCAATG 59.069 38.462 0.00 0.00 0.00 2.82
2836 3157 5.241662 AGAAGAGGTAGAAACTGTCAATGC 58.758 41.667 0.00 0.00 0.00 3.56
2837 3158 4.899352 AGAGGTAGAAACTGTCAATGCT 57.101 40.909 0.00 0.00 0.00 3.79
2838 3159 6.211584 AGAAGAGGTAGAAACTGTCAATGCTA 59.788 38.462 0.00 0.00 0.00 3.49
2839 3160 6.360370 AGAGGTAGAAACTGTCAATGCTAA 57.640 37.500 0.00 0.00 0.00 3.09
2840 3161 6.769512 AGAGGTAGAAACTGTCAATGCTAAA 58.230 36.000 0.00 0.00 0.00 1.85
2841 3162 7.224297 AGAGGTAGAAACTGTCAATGCTAAAA 58.776 34.615 0.00 0.00 0.00 1.52
2842 3163 7.885399 AGAGGTAGAAACTGTCAATGCTAAAAT 59.115 33.333 0.00 0.00 0.00 1.82
2843 3164 8.409358 AGGTAGAAACTGTCAATGCTAAAATT 57.591 30.769 0.00 0.00 0.00 1.82
2844 3165 9.515226 AGGTAGAAACTGTCAATGCTAAAATTA 57.485 29.630 0.00 0.00 0.00 1.40
2860 3181 9.868277 TGCTAAAATTAATTAAGACAACCATGG 57.132 29.630 11.19 11.19 0.00 3.66
2861 3182 9.313118 GCTAAAATTAATTAAGACAACCATGGG 57.687 33.333 18.09 0.85 0.00 4.00
2864 3185 5.652994 TTAATTAAGACAACCATGGGTGC 57.347 39.130 30.15 21.27 35.34 5.01
2865 3186 2.666272 TTAAGACAACCATGGGTGCA 57.334 45.000 30.15 9.78 35.34 4.57
2866 3187 2.666272 TAAGACAACCATGGGTGCAA 57.334 45.000 30.15 9.76 35.34 4.08
2867 3188 1.786937 AAGACAACCATGGGTGCAAA 58.213 45.000 30.15 0.00 35.34 3.68
2868 3189 1.786937 AGACAACCATGGGTGCAAAA 58.213 45.000 30.15 0.00 35.34 2.44
2869 3190 2.328319 AGACAACCATGGGTGCAAAAT 58.672 42.857 30.15 9.94 35.34 1.82
2870 3191 2.705127 AGACAACCATGGGTGCAAAATT 59.295 40.909 30.15 9.09 35.34 1.82
2871 3192 3.066380 GACAACCATGGGTGCAAAATTC 58.934 45.455 30.15 14.67 35.34 2.17
2872 3193 2.705127 ACAACCATGGGTGCAAAATTCT 59.295 40.909 30.15 4.36 35.34 2.40
2873 3194 3.900601 ACAACCATGGGTGCAAAATTCTA 59.099 39.130 30.15 0.00 35.34 2.10
2874 3195 4.531732 ACAACCATGGGTGCAAAATTCTAT 59.468 37.500 30.15 2.69 35.34 1.98
2875 3196 4.741321 ACCATGGGTGCAAAATTCTATG 57.259 40.909 18.09 0.00 32.98 2.23
2876 3197 4.095946 ACCATGGGTGCAAAATTCTATGT 58.904 39.130 18.09 0.00 32.98 2.29
2877 3198 4.160252 ACCATGGGTGCAAAATTCTATGTC 59.840 41.667 18.09 0.00 32.98 3.06
2878 3199 4.353737 CATGGGTGCAAAATTCTATGTCG 58.646 43.478 0.00 0.00 0.00 4.35
2879 3200 3.417101 TGGGTGCAAAATTCTATGTCGT 58.583 40.909 0.00 0.00 0.00 4.34
2880 3201 3.823873 TGGGTGCAAAATTCTATGTCGTT 59.176 39.130 0.00 0.00 0.00 3.85
2881 3202 4.279671 TGGGTGCAAAATTCTATGTCGTTT 59.720 37.500 0.00 0.00 0.00 3.60
2882 3203 4.857037 GGGTGCAAAATTCTATGTCGTTTC 59.143 41.667 0.00 0.00 0.00 2.78
2883 3204 5.335661 GGGTGCAAAATTCTATGTCGTTTCT 60.336 40.000 0.00 0.00 0.00 2.52
2884 3205 6.149633 GGTGCAAAATTCTATGTCGTTTCTT 58.850 36.000 0.00 0.00 0.00 2.52
2885 3206 7.302524 GGTGCAAAATTCTATGTCGTTTCTTA 58.697 34.615 0.00 0.00 0.00 2.10
2886 3207 7.481798 GGTGCAAAATTCTATGTCGTTTCTTAG 59.518 37.037 0.00 0.00 0.00 2.18
2887 3208 8.015658 GTGCAAAATTCTATGTCGTTTCTTAGT 58.984 33.333 0.00 0.00 0.00 2.24
2888 3209 8.227791 TGCAAAATTCTATGTCGTTTCTTAGTC 58.772 33.333 0.00 0.00 0.00 2.59
2889 3210 8.227791 GCAAAATTCTATGTCGTTTCTTAGTCA 58.772 33.333 0.00 0.00 0.00 3.41
2892 3213 7.829378 ATTCTATGTCGTTTCTTAGTCAACC 57.171 36.000 0.00 0.00 0.00 3.77
2893 3214 6.585695 TCTATGTCGTTTCTTAGTCAACCT 57.414 37.500 0.00 0.00 0.00 3.50
2894 3215 6.989659 TCTATGTCGTTTCTTAGTCAACCTT 58.010 36.000 0.00 0.00 0.00 3.50
2895 3216 8.114331 TCTATGTCGTTTCTTAGTCAACCTTA 57.886 34.615 0.00 0.00 0.00 2.69
2896 3217 8.746530 TCTATGTCGTTTCTTAGTCAACCTTAT 58.253 33.333 0.00 0.00 0.00 1.73
2899 3220 9.715121 ATGTCGTTTCTTAGTCAACCTTATAAA 57.285 29.630 0.00 0.00 0.00 1.40
2900 3221 9.545105 TGTCGTTTCTTAGTCAACCTTATAAAA 57.455 29.630 0.00 0.00 0.00 1.52
2901 3222 9.803130 GTCGTTTCTTAGTCAACCTTATAAAAC 57.197 33.333 0.00 0.00 0.00 2.43
2902 3223 9.768662 TCGTTTCTTAGTCAACCTTATAAAACT 57.231 29.630 0.00 0.00 0.00 2.66
2911 3232 9.939802 AGTCAACCTTATAAAACTAAAGACGAT 57.060 29.630 0.00 0.00 0.00 3.73
2912 3233 9.968743 GTCAACCTTATAAAACTAAAGACGATG 57.031 33.333 0.00 0.00 0.00 3.84
2913 3234 9.932207 TCAACCTTATAAAACTAAAGACGATGA 57.068 29.630 0.00 0.00 0.00 2.92
2923 3244 8.641499 AAACTAAAGACGATGAAAATTTTGCA 57.359 26.923 8.47 6.82 0.00 4.08
2924 3245 8.641499 AACTAAAGACGATGAAAATTTTGCAA 57.359 26.923 8.47 0.00 0.00 4.08
2925 3246 8.641499 ACTAAAGACGATGAAAATTTTGCAAA 57.359 26.923 8.05 8.05 0.00 3.68
2926 3247 9.092876 ACTAAAGACGATGAAAATTTTGCAAAA 57.907 25.926 25.76 25.76 0.00 2.44
2927 3248 9.913451 CTAAAGACGATGAAAATTTTGCAAAAA 57.087 25.926 27.10 11.87 0.00 1.94
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 6.963796 AGTTTATTTGGATGAGCAATCGATC 58.036 36.000 0.00 0.00 35.99 3.69
1 2 6.949352 AGTTTATTTGGATGAGCAATCGAT 57.051 33.333 0.00 0.00 35.99 3.59
2 3 7.498900 ACATAGTTTATTTGGATGAGCAATCGA 59.501 33.333 0.00 0.00 35.99 3.59
3 4 7.642669 ACATAGTTTATTTGGATGAGCAATCG 58.357 34.615 0.00 0.00 35.99 3.34
4 5 9.241317 CAACATAGTTTATTTGGATGAGCAATC 57.759 33.333 0.00 0.00 34.19 2.67
5 6 8.970020 TCAACATAGTTTATTTGGATGAGCAAT 58.030 29.630 0.00 0.00 0.00 3.56
6 7 8.347004 TCAACATAGTTTATTTGGATGAGCAA 57.653 30.769 0.00 0.00 0.00 3.91
7 8 7.936496 TCAACATAGTTTATTTGGATGAGCA 57.064 32.000 0.00 0.00 0.00 4.26
22 23 9.646522 AGCCTAATTTTCCATAATCAACATAGT 57.353 29.630 0.00 0.00 0.00 2.12
25 26 9.822185 GAAAGCCTAATTTTCCATAATCAACAT 57.178 29.630 0.00 0.00 0.00 2.71
26 27 8.811017 TGAAAGCCTAATTTTCCATAATCAACA 58.189 29.630 0.00 0.00 34.43 3.33
27 28 9.651913 TTGAAAGCCTAATTTTCCATAATCAAC 57.348 29.630 0.00 0.00 34.43 3.18
58 59 9.422681 TCTAGAAGAACTATAGCAAGTACCATT 57.577 33.333 0.00 0.00 0.00 3.16
59 60 8.998277 TCTAGAAGAACTATAGCAAGTACCAT 57.002 34.615 0.00 0.00 0.00 3.55
89 90 8.616076 AGAGTTTATTTGGATGAACAATCGATC 58.384 33.333 0.00 0.00 35.00 3.69
92 93 7.978982 AGAGAGTTTATTTGGATGAACAATCG 58.021 34.615 0.00 0.00 35.00 3.34
94 95 8.526147 CCAAGAGAGTTTATTTGGATGAACAAT 58.474 33.333 0.00 0.00 42.05 2.71
95 96 7.505585 ACCAAGAGAGTTTATTTGGATGAACAA 59.494 33.333 8.93 0.00 42.05 2.83
96 97 7.004086 ACCAAGAGAGTTTATTTGGATGAACA 58.996 34.615 8.93 0.00 42.05 3.18
97 98 7.454260 ACCAAGAGAGTTTATTTGGATGAAC 57.546 36.000 8.93 0.00 42.05 3.18
98 99 7.176690 GGAACCAAGAGAGTTTATTTGGATGAA 59.823 37.037 8.93 0.00 42.05 2.57
119 120 9.159364 GTTTCGGGTATAATAATATGAGGAACC 57.841 37.037 0.00 0.00 0.00 3.62
123 124 9.367444 GAGTGTTTCGGGTATAATAATATGAGG 57.633 37.037 0.00 0.00 0.00 3.86
125 126 8.316214 GGGAGTGTTTCGGGTATAATAATATGA 58.684 37.037 0.00 0.00 0.00 2.15
140 141 3.354467 AGTACCTAGAGGGAGTGTTTCG 58.646 50.000 0.00 0.00 40.27 3.46
144 145 4.976442 TCATCTAGTACCTAGAGGGAGTGT 59.024 45.833 11.66 0.00 44.80 3.55
149 150 5.942961 TCAGTTCATCTAGTACCTAGAGGG 58.057 45.833 11.66 5.21 44.80 4.30
152 153 7.063934 TCGATCAGTTCATCTAGTACCTAGA 57.936 40.000 3.61 3.61 45.52 2.43
153 154 7.731882 TTCGATCAGTTCATCTAGTACCTAG 57.268 40.000 0.00 0.00 35.57 3.02
171 172 1.340114 ACCCCTTGCCTCTTTTCGATC 60.340 52.381 0.00 0.00 0.00 3.69
173 174 1.354101 TACCCCTTGCCTCTTTTCGA 58.646 50.000 0.00 0.00 0.00 3.71
176 177 1.787058 ACCTTACCCCTTGCCTCTTTT 59.213 47.619 0.00 0.00 0.00 2.27
208 209 9.796120 CATTTAACTAACTGAACTGTCCAAAAA 57.204 29.630 0.00 0.00 0.00 1.94
221 431 7.995289 TGCCCACATAATCATTTAACTAACTG 58.005 34.615 0.00 0.00 0.00 3.16
240 450 8.040716 GGTAACAAATATACTCATATGCCCAC 57.959 38.462 0.00 0.00 0.00 4.61
286 496 9.308000 TGAACACCATGGTCTATCTTAATTTTT 57.692 29.630 16.53 0.00 34.53 1.94
287 497 8.877864 TGAACACCATGGTCTATCTTAATTTT 57.122 30.769 16.53 0.00 34.53 1.82
303 513 5.917462 TGATAGAATCGACATGAACACCAT 58.083 37.500 0.00 0.00 35.44 3.55
316 526 7.172190 AGGATAACACAAATGCTGATAGAATCG 59.828 37.037 0.00 0.00 0.00 3.34
327 537 4.439289 GCAGAAGGAGGATAACACAAATGC 60.439 45.833 0.00 0.00 0.00 3.56
333 543 3.618690 AGTGCAGAAGGAGGATAACAC 57.381 47.619 0.00 0.00 0.00 3.32
354 564 1.528824 CGGGAGTGCAATCTGGGAT 59.471 57.895 14.60 0.00 0.00 3.85
355 565 2.669133 CCGGGAGTGCAATCTGGGA 61.669 63.158 14.60 0.00 0.00 4.37
358 568 0.877649 CGATCCGGGAGTGCAATCTG 60.878 60.000 14.60 7.02 0.00 2.90
371 581 4.470170 TCCGTCACGTGCGATCCG 62.470 66.667 26.33 15.73 0.00 4.18
372 582 2.879462 GTCCGTCACGTGCGATCC 60.879 66.667 26.33 13.71 0.00 3.36
380 590 1.262950 TGAAGCAAAATGTCCGTCACG 59.737 47.619 0.00 0.00 0.00 4.35
384 595 5.431765 AGATCTATGAAGCAAAATGTCCGT 58.568 37.500 0.00 0.00 0.00 4.69
388 599 6.602406 AGCAAGAGATCTATGAAGCAAAATGT 59.398 34.615 11.25 0.00 0.00 2.71
434 645 7.543172 TGCAAACAATTAAATTCAGAGATGAGC 59.457 33.333 0.00 0.00 0.00 4.26
444 655 7.953710 GCTCATCAAGTGCAAACAATTAAATTC 59.046 33.333 0.00 0.00 36.75 2.17
458 669 2.096496 GGTGTGTATGCTCATCAAGTGC 59.904 50.000 0.00 0.00 37.26 4.40
462 673 4.558226 AGAAGGTGTGTATGCTCATCAA 57.442 40.909 0.00 0.00 0.00 2.57
478 689 6.867662 ATATGCACGGAAAGAAATAGAAGG 57.132 37.500 0.00 0.00 0.00 3.46
522 733 9.812347 AACATAATGCAGATAATAATTCAGGGA 57.188 29.630 0.00 0.00 0.00 4.20
545 756 6.155827 GCAGCCTATATGTTTTGAACAAACA 58.844 36.000 2.78 2.78 45.86 2.83
568 779 9.317936 CAATTTCCCTAAAAGGAAGAATATTGC 57.682 33.333 0.00 0.00 46.44 3.56
573 784 9.997172 ATACTCAATTTCCCTAAAAGGAAGAAT 57.003 29.630 0.00 0.00 46.44 2.40
586 797 8.974060 TGTAAACCATAGATACTCAATTTCCC 57.026 34.615 0.00 0.00 0.00 3.97
598 809 6.491403 GCCATCCATCTTTGTAAACCATAGAT 59.509 38.462 0.00 0.00 41.00 1.98
599 810 5.827797 GCCATCCATCTTTGTAAACCATAGA 59.172 40.000 0.00 0.00 35.90 1.98
600 811 5.277974 CGCCATCCATCTTTGTAAACCATAG 60.278 44.000 0.00 0.00 0.00 2.23
623 834 4.562394 AGATGCATTTTACAATTTTCGGCG 59.438 37.500 0.00 0.00 0.00 6.46
627 838 8.872845 CCTACCAAGATGCATTTTACAATTTTC 58.127 33.333 0.00 0.00 0.00 2.29
630 841 6.070881 TGCCTACCAAGATGCATTTTACAATT 60.071 34.615 0.00 0.00 0.00 2.32
634 845 4.981806 TGCCTACCAAGATGCATTTTAC 57.018 40.909 0.00 0.00 0.00 2.01
648 859 3.808728 TGCATGAGACTAAATGCCTACC 58.191 45.455 16.23 0.00 46.95 3.18
705 929 7.360607 CGTTGTCCGAATAAGTAGATTGGTTTT 60.361 37.037 0.00 0.00 39.56 2.43
706 930 6.091713 CGTTGTCCGAATAAGTAGATTGGTTT 59.908 38.462 0.00 0.00 39.56 3.27
719 943 0.250793 ACATGGCCGTTGTCCGAATA 59.749 50.000 5.35 0.00 39.56 1.75
720 944 1.002624 ACATGGCCGTTGTCCGAAT 60.003 52.632 5.35 0.00 39.56 3.34
724 948 0.604243 TACACACATGGCCGTTGTCC 60.604 55.000 8.12 0.00 0.00 4.02
725 949 0.515564 GTACACACATGGCCGTTGTC 59.484 55.000 8.12 0.00 0.00 3.18
726 950 0.179043 TGTACACACATGGCCGTTGT 60.179 50.000 5.35 5.35 0.00 3.32
727 951 0.237235 GTGTACACACATGGCCGTTG 59.763 55.000 21.14 0.00 45.75 4.10
728 952 2.624169 GTGTACACACATGGCCGTT 58.376 52.632 21.14 0.00 45.75 4.44
759 983 9.914834 TTGCAATATTGTATCCTAACTAACCTT 57.085 29.630 16.61 0.00 0.00 3.50
775 999 9.434420 TTGAGGGTAATTTTTCTTGCAATATTG 57.566 29.630 11.27 11.27 0.00 1.90
777 1001 9.034800 TCTTGAGGGTAATTTTTCTTGCAATAT 57.965 29.630 0.00 0.00 0.00 1.28
780 1004 6.723298 TCTTGAGGGTAATTTTTCTTGCAA 57.277 33.333 0.00 0.00 0.00 4.08
823 1047 6.344500 AGTGTGTGAAGCCATTCTCTAATAG 58.656 40.000 0.00 0.00 36.33 1.73
837 1061 7.011016 TCCGTATTTATTGCATAGTGTGTGAAG 59.989 37.037 0.00 0.00 0.00 3.02
846 1070 7.600375 ACTGTCATCTCCGTATTTATTGCATAG 59.400 37.037 0.00 0.00 0.00 2.23
848 1072 6.291377 ACTGTCATCTCCGTATTTATTGCAT 58.709 36.000 0.00 0.00 0.00 3.96
858 1082 5.108187 AGGTTAGTACTGTCATCTCCGTA 57.892 43.478 5.39 0.00 0.00 4.02
860 1084 6.636562 AATAGGTTAGTACTGTCATCTCCG 57.363 41.667 5.39 0.00 0.00 4.63
864 1088 8.773404 ACAACAAATAGGTTAGTACTGTCATC 57.227 34.615 5.39 0.00 0.00 2.92
865 1089 9.216117 GAACAACAAATAGGTTAGTACTGTCAT 57.784 33.333 5.39 0.00 0.00 3.06
868 1092 7.742767 AGGAACAACAAATAGGTTAGTACTGT 58.257 34.615 5.39 0.00 0.00 3.55
871 1095 7.658575 TGTGAGGAACAACAAATAGGTTAGTAC 59.341 37.037 0.00 0.00 35.24 2.73
896 1120 5.652518 TGCACATACCATCAAATGACATTG 58.347 37.500 0.34 0.00 0.00 2.82
904 1128 9.585099 GAAAAGATATTTGCACATACCATCAAA 57.415 29.630 0.00 0.00 33.64 2.69
905 1129 8.747471 TGAAAAGATATTTGCACATACCATCAA 58.253 29.630 0.00 0.00 0.00 2.57
965 1189 6.018098 GCCACAATCAAATCATTTTGTCACAA 60.018 34.615 0.00 0.00 42.37 3.33
988 1212 6.501781 CATTAGACTCCATTTTTGATCTGCC 58.498 40.000 0.00 0.00 0.00 4.85
989 1213 5.975939 GCATTAGACTCCATTTTTGATCTGC 59.024 40.000 0.00 0.00 0.00 4.26
995 1219 5.902613 TCCAGCATTAGACTCCATTTTTG 57.097 39.130 0.00 0.00 0.00 2.44
1029 1253 2.285083 TCACTGAACGTTTCACTTGGG 58.715 47.619 0.46 0.00 35.46 4.12
1063 1287 9.561069 GTTTGGTGTAATATAGAGACATTCCAT 57.439 33.333 0.00 0.00 0.00 3.41
1064 1288 7.709182 CGTTTGGTGTAATATAGAGACATTCCA 59.291 37.037 0.00 0.00 0.00 3.53
1065 1289 7.924412 TCGTTTGGTGTAATATAGAGACATTCC 59.076 37.037 0.00 0.00 0.00 3.01
1073 1297 5.128171 ACAGCCTCGTTTGGTGTAATATAGA 59.872 40.000 5.00 0.00 0.00 1.98
1089 1313 3.357079 AAGCGCCAAACAGCCTCG 61.357 61.111 2.29 0.00 0.00 4.63
1111 1335 6.267928 AGGTATGTAGGGTGAATGTGATACTC 59.732 42.308 0.00 0.00 0.00 2.59
1117 1341 4.442706 GACAGGTATGTAGGGTGAATGTG 58.557 47.826 0.00 0.00 40.68 3.21
1127 1351 6.231211 AGTCTTTTTGTGGACAGGTATGTAG 58.769 40.000 0.00 0.00 40.68 2.74
1136 1360 2.241176 ACAGGGAGTCTTTTTGTGGACA 59.759 45.455 0.00 0.00 35.18 4.02
1144 1368 8.832735 TCCATTAAGTATAACAGGGAGTCTTTT 58.167 33.333 0.00 0.00 0.00 2.27
1390 1634 8.537728 TCATGGCAAACCTCTCAATATTTATT 57.462 30.769 0.00 0.00 36.63 1.40
1480 1727 3.524789 TCCTCTGGTGTTTGGATCATCAT 59.475 43.478 0.00 0.00 0.00 2.45
1532 1779 1.394917 GAGTGTTGATAGTTGCGCCTG 59.605 52.381 4.18 0.00 0.00 4.85
1576 1827 8.601476 CCGGTTGATTTATACAGAGTTCTAAAC 58.399 37.037 0.00 0.00 0.00 2.01
1784 2046 1.627329 AGTTCTGCAGCCTCAAGATCA 59.373 47.619 9.47 0.00 0.00 2.92
1836 2098 7.432059 AGTGATATGAGATGACACACATACTG 58.568 38.462 0.00 0.00 39.56 2.74
1840 2121 7.147672 TGGTAAGTGATATGAGATGACACACAT 60.148 37.037 0.00 0.00 42.47 3.21
1841 2122 6.154363 TGGTAAGTGATATGAGATGACACACA 59.846 38.462 0.00 0.00 34.47 3.72
1842 2123 6.573434 TGGTAAGTGATATGAGATGACACAC 58.427 40.000 0.00 0.00 34.47 3.82
1843 2124 6.790232 TGGTAAGTGATATGAGATGACACA 57.210 37.500 0.00 0.00 34.47 3.72
1844 2125 8.668510 ATTTGGTAAGTGATATGAGATGACAC 57.331 34.615 0.00 0.00 0.00 3.67
1845 2126 9.330063 GAATTTGGTAAGTGATATGAGATGACA 57.670 33.333 0.00 0.00 0.00 3.58
1846 2127 8.778358 GGAATTTGGTAAGTGATATGAGATGAC 58.222 37.037 0.00 0.00 0.00 3.06
1847 2128 8.493607 TGGAATTTGGTAAGTGATATGAGATGA 58.506 33.333 0.00 0.00 0.00 2.92
1848 2129 8.681486 TGGAATTTGGTAAGTGATATGAGATG 57.319 34.615 0.00 0.00 0.00 2.90
1849 2130 9.699410 TTTGGAATTTGGTAAGTGATATGAGAT 57.301 29.630 0.00 0.00 0.00 2.75
1850 2131 9.699410 ATTTGGAATTTGGTAAGTGATATGAGA 57.301 29.630 0.00 0.00 0.00 3.27
1894 2176 6.476706 GCATTGCTGTTAGAGAACAAAAAGTT 59.523 34.615 0.16 0.00 44.90 2.66
1904 2186 3.701205 TTCCTGCATTGCTGTTAGAGA 57.299 42.857 10.49 0.00 0.00 3.10
1908 2190 3.382865 TGTTGTTTCCTGCATTGCTGTTA 59.617 39.130 10.49 0.00 0.00 2.41
1916 2198 4.281435 TCATTGTCATGTTGTTTCCTGCAT 59.719 37.500 0.00 0.00 0.00 3.96
1922 2204 9.282247 CTTAGCTATTCATTGTCATGTTGTTTC 57.718 33.333 0.00 0.00 0.00 2.78
1923 2205 9.013229 TCTTAGCTATTCATTGTCATGTTGTTT 57.987 29.630 0.00 0.00 0.00 2.83
1941 2223 3.450904 TCCTCTTGGCCTTTCTTAGCTA 58.549 45.455 3.32 0.00 0.00 3.32
1943 2225 2.789409 TCCTCTTGGCCTTTCTTAGC 57.211 50.000 3.32 0.00 0.00 3.09
1951 2233 0.541863 CGGTGTTATCCTCTTGGCCT 59.458 55.000 3.32 0.00 0.00 5.19
1979 2262 6.360370 ACATGAAACTGACAGTACCTATGT 57.640 37.500 8.91 13.56 0.00 2.29
1992 2275 7.042523 GGACAATTTTCTTTGGACATGAAACTG 60.043 37.037 0.00 0.00 30.66 3.16
2008 2291 7.813645 ACATACCTAACTTTCGGACAATTTTC 58.186 34.615 0.00 0.00 0.00 2.29
2015 2298 5.341617 CAGAGACATACCTAACTTTCGGAC 58.658 45.833 0.00 0.00 0.00 4.79
2019 2302 5.980715 GCTAGCAGAGACATACCTAACTTTC 59.019 44.000 10.63 0.00 0.00 2.62
2031 2314 3.431415 TCTAAACAGGCTAGCAGAGACA 58.569 45.455 18.24 0.00 34.40 3.41
2032 2315 3.181480 CCTCTAAACAGGCTAGCAGAGAC 60.181 52.174 22.54 4.69 32.98 3.36
2038 2345 2.389715 TCCTCCTCTAAACAGGCTAGC 58.610 52.381 6.04 6.04 32.91 3.42
2073 2380 8.213518 TCCTGCATATTGTAAAAAGAGCTTAG 57.786 34.615 0.00 0.00 0.00 2.18
2075 2382 7.651027 ATCCTGCATATTGTAAAAAGAGCTT 57.349 32.000 0.00 0.00 0.00 3.74
2076 2383 8.930846 ATATCCTGCATATTGTAAAAAGAGCT 57.069 30.769 0.00 0.00 0.00 4.09
2077 2384 9.403110 CAATATCCTGCATATTGTAAAAAGAGC 57.597 33.333 9.46 0.00 45.24 4.09
2090 2398 5.039920 AGTGCTTGACAATATCCTGCATA 57.960 39.130 1.48 0.00 37.05 3.14
2102 2410 1.134431 TGCTTGAGTGAGTGCTTGACA 60.134 47.619 0.00 0.00 0.00 3.58
2184 2499 8.211629 GGATCACCCAAAAGTACTACTAATGAT 58.788 37.037 0.00 2.11 34.14 2.45
2194 2509 2.354821 GCATCGGATCACCCAAAAGTAC 59.645 50.000 0.00 0.00 34.14 2.73
2200 2515 0.255604 ACATGCATCGGATCACCCAA 59.744 50.000 0.00 0.00 34.14 4.12
2211 2526 8.663025 CATTATCCATAACTCAGTACATGCATC 58.337 37.037 0.00 0.00 0.00 3.91
2288 2603 9.638239 GATTGAAAAAGTGAGCCACAATATAAA 57.362 29.630 7.86 0.00 36.74 1.40
2305 2620 3.953874 TGAGTTCACGCGATTGAAAAA 57.046 38.095 15.93 0.00 37.24 1.94
2309 2624 1.731709 CCAATGAGTTCACGCGATTGA 59.268 47.619 15.93 3.57 0.00 2.57
2310 2625 1.464608 ACCAATGAGTTCACGCGATTG 59.535 47.619 15.93 10.39 0.00 2.67
2312 2627 2.665649 TACCAATGAGTTCACGCGAT 57.334 45.000 15.93 0.00 0.00 4.58
2313 2628 2.442212 TTACCAATGAGTTCACGCGA 57.558 45.000 15.93 0.00 0.00 5.87
2315 2630 5.539582 TGTAATTACCAATGAGTTCACGC 57.460 39.130 13.01 0.00 0.00 5.34
2316 2631 7.302350 TCATGTAATTACCAATGAGTTCACG 57.698 36.000 13.01 0.00 0.00 4.35
2317 2632 8.892723 TCATCATGTAATTACCAATGAGTTCAC 58.107 33.333 18.29 0.00 32.85 3.18
2318 2633 9.631257 ATCATCATGTAATTACCAATGAGTTCA 57.369 29.630 18.29 7.52 32.85 3.18
2351 2667 4.498009 GGTTAATGCACATGCCACTACATC 60.498 45.833 0.49 0.00 41.18 3.06
2360 2676 7.596248 CCTCATAATTAAGGTTAATGCACATGC 59.404 37.037 0.00 0.00 42.50 4.06
2371 2687 9.807921 CAACCCATATACCTCATAATTAAGGTT 57.192 33.333 12.96 5.60 43.45 3.50
2381 2697 5.594317 GTGAAAAGCAACCCATATACCTCAT 59.406 40.000 0.00 0.00 0.00 2.90
2393 2709 7.370383 TCATCTCAATAAAGTGAAAAGCAACC 58.630 34.615 0.00 0.00 0.00 3.77
2467 2785 5.822519 TCCTATTTGTACCATTCACAGATGC 59.177 40.000 0.00 0.00 0.00 3.91
2471 2789 7.509546 ACCTATCCTATTTGTACCATTCACAG 58.490 38.462 0.00 0.00 0.00 3.66
2510 2831 9.893634 TCAAGATTTTGGAAGTAATTATACCGA 57.106 29.630 0.00 0.00 34.97 4.69
2552 2873 9.699703 GTTTGCTATAAAATTTTGGTAGGTTCA 57.300 29.630 13.76 6.73 0.00 3.18
2553 2874 9.146984 GGTTTGCTATAAAATTTTGGTAGGTTC 57.853 33.333 13.76 4.67 0.00 3.62
2554 2875 8.652290 TGGTTTGCTATAAAATTTTGGTAGGTT 58.348 29.630 13.76 0.00 0.00 3.50
2555 2876 8.196378 TGGTTTGCTATAAAATTTTGGTAGGT 57.804 30.769 13.76 0.00 0.00 3.08
2556 2877 8.931775 GTTGGTTTGCTATAAAATTTTGGTAGG 58.068 33.333 13.76 1.22 0.00 3.18
2557 2878 9.482627 TGTTGGTTTGCTATAAAATTTTGGTAG 57.517 29.630 13.76 14.81 0.00 3.18
2558 2879 9.832445 TTGTTGGTTTGCTATAAAATTTTGGTA 57.168 25.926 13.76 5.82 0.00 3.25
2559 2880 8.616942 GTTGTTGGTTTGCTATAAAATTTTGGT 58.383 29.630 13.76 4.96 0.00 3.67
2560 2881 8.835439 AGTTGTTGGTTTGCTATAAAATTTTGG 58.165 29.630 13.76 5.09 0.00 3.28
2570 2891 9.908152 GATTTAGTTTAGTTGTTGGTTTGCTAT 57.092 29.630 0.00 0.00 0.00 2.97
2571 2892 8.904834 TGATTTAGTTTAGTTGTTGGTTTGCTA 58.095 29.630 0.00 0.00 0.00 3.49
2572 2893 7.777095 TGATTTAGTTTAGTTGTTGGTTTGCT 58.223 30.769 0.00 0.00 0.00 3.91
2573 2894 7.995463 TGATTTAGTTTAGTTGTTGGTTTGC 57.005 32.000 0.00 0.00 0.00 3.68
2586 2907 9.745880 GCTGCTGTAGTAGTATGATTTAGTTTA 57.254 33.333 0.00 0.00 0.00 2.01
2587 2908 8.258007 TGCTGCTGTAGTAGTATGATTTAGTTT 58.742 33.333 0.00 0.00 0.00 2.66
2588 2909 7.707035 GTGCTGCTGTAGTAGTATGATTTAGTT 59.293 37.037 0.00 0.00 0.00 2.24
2589 2910 7.203910 GTGCTGCTGTAGTAGTATGATTTAGT 58.796 38.462 0.00 0.00 0.00 2.24
2590 2911 6.642950 GGTGCTGCTGTAGTAGTATGATTTAG 59.357 42.308 0.00 0.00 0.00 1.85
2591 2912 6.462487 GGGTGCTGCTGTAGTAGTATGATTTA 60.462 42.308 0.00 0.00 0.00 1.40
2592 2913 5.360591 GGTGCTGCTGTAGTAGTATGATTT 58.639 41.667 0.00 0.00 0.00 2.17
2593 2914 4.202264 GGGTGCTGCTGTAGTAGTATGATT 60.202 45.833 0.00 0.00 0.00 2.57
2594 2915 3.322254 GGGTGCTGCTGTAGTAGTATGAT 59.678 47.826 0.00 0.00 0.00 2.45
2595 2916 2.693591 GGGTGCTGCTGTAGTAGTATGA 59.306 50.000 0.00 0.00 0.00 2.15
2596 2917 2.695666 AGGGTGCTGCTGTAGTAGTATG 59.304 50.000 0.00 0.00 0.00 2.39
2597 2918 3.033659 AGGGTGCTGCTGTAGTAGTAT 57.966 47.619 0.00 0.00 0.00 2.12
2598 2919 2.526888 AGGGTGCTGCTGTAGTAGTA 57.473 50.000 0.00 0.00 0.00 1.82
2599 2920 2.100989 GTAGGGTGCTGCTGTAGTAGT 58.899 52.381 0.00 0.00 0.00 2.73
2600 2921 1.409427 GGTAGGGTGCTGCTGTAGTAG 59.591 57.143 0.00 0.00 0.00 2.57
2601 2922 1.006758 AGGTAGGGTGCTGCTGTAGTA 59.993 52.381 0.00 0.00 0.00 1.82
2602 2923 0.252284 AGGTAGGGTGCTGCTGTAGT 60.252 55.000 0.00 0.00 0.00 2.73
2603 2924 1.409427 GTAGGTAGGGTGCTGCTGTAG 59.591 57.143 0.00 0.00 0.00 2.74
2604 2925 1.272816 TGTAGGTAGGGTGCTGCTGTA 60.273 52.381 0.00 0.00 0.00 2.74
2605 2926 0.544357 TGTAGGTAGGGTGCTGCTGT 60.544 55.000 0.00 0.00 0.00 4.40
2606 2927 0.108138 GTGTAGGTAGGGTGCTGCTG 60.108 60.000 0.00 0.00 0.00 4.41
2607 2928 0.252284 AGTGTAGGTAGGGTGCTGCT 60.252 55.000 0.00 0.00 0.00 4.24
2608 2929 1.481871 TAGTGTAGGTAGGGTGCTGC 58.518 55.000 0.00 0.00 0.00 5.25
2609 2930 2.431057 CCTTAGTGTAGGTAGGGTGCTG 59.569 54.545 0.00 0.00 0.00 4.41
2610 2931 2.748388 CCTTAGTGTAGGTAGGGTGCT 58.252 52.381 0.00 0.00 0.00 4.40
2611 2932 1.138464 GCCTTAGTGTAGGTAGGGTGC 59.862 57.143 0.00 0.00 37.63 5.01
2612 2933 1.761198 GGCCTTAGTGTAGGTAGGGTG 59.239 57.143 0.00 0.00 37.63 4.61
2613 2934 1.363629 TGGCCTTAGTGTAGGTAGGGT 59.636 52.381 3.32 0.00 37.63 4.34
2614 2935 2.170012 TGGCCTTAGTGTAGGTAGGG 57.830 55.000 3.32 0.00 37.63 3.53
2615 2936 2.158943 GCTTGGCCTTAGTGTAGGTAGG 60.159 54.545 3.32 0.00 37.63 3.18
2616 2937 2.500098 TGCTTGGCCTTAGTGTAGGTAG 59.500 50.000 3.32 0.00 37.63 3.18
2617 2938 2.500098 CTGCTTGGCCTTAGTGTAGGTA 59.500 50.000 3.32 0.00 37.63 3.08
2618 2939 1.279271 CTGCTTGGCCTTAGTGTAGGT 59.721 52.381 3.32 0.00 37.63 3.08
2619 2940 2.014068 GCTGCTTGGCCTTAGTGTAGG 61.014 57.143 3.32 0.00 38.40 3.18
2620 2941 1.339055 TGCTGCTTGGCCTTAGTGTAG 60.339 52.381 3.32 3.68 0.00 2.74
2621 2942 0.690192 TGCTGCTTGGCCTTAGTGTA 59.310 50.000 3.32 0.00 0.00 2.90
2622 2943 0.607489 CTGCTGCTTGGCCTTAGTGT 60.607 55.000 3.32 0.00 0.00 3.55
2623 2944 1.310933 CCTGCTGCTTGGCCTTAGTG 61.311 60.000 3.32 0.74 0.00 2.74
2624 2945 1.001641 CCTGCTGCTTGGCCTTAGT 60.002 57.895 3.32 0.00 0.00 2.24
2625 2946 1.001641 ACCTGCTGCTTGGCCTTAG 60.002 57.895 3.32 2.21 0.00 2.18
2626 2947 1.303561 CACCTGCTGCTTGGCCTTA 60.304 57.895 3.32 0.00 0.00 2.69
2627 2948 2.599578 CACCTGCTGCTTGGCCTT 60.600 61.111 3.32 0.00 0.00 4.35
2636 2957 1.310216 TGCTTGCTATGCACCTGCTG 61.310 55.000 8.51 3.82 38.71 4.41
2637 2958 0.395311 ATGCTTGCTATGCACCTGCT 60.395 50.000 8.51 0.00 43.59 4.24
2638 2959 0.248907 CATGCTTGCTATGCACCTGC 60.249 55.000 0.00 0.00 43.59 4.85
2639 2960 0.384309 CCATGCTTGCTATGCACCTG 59.616 55.000 0.00 0.00 43.59 4.00
2640 2961 0.256752 TCCATGCTTGCTATGCACCT 59.743 50.000 0.00 0.00 43.59 4.00
2641 2962 1.105457 TTCCATGCTTGCTATGCACC 58.895 50.000 0.00 0.00 43.59 5.01
2642 2963 1.473677 TGTTCCATGCTTGCTATGCAC 59.526 47.619 0.00 0.00 43.59 4.57
2643 2964 1.473677 GTGTTCCATGCTTGCTATGCA 59.526 47.619 0.00 0.00 44.95 3.96
2644 2965 1.532505 CGTGTTCCATGCTTGCTATGC 60.533 52.381 0.00 0.00 0.00 3.14
2645 2966 1.532505 GCGTGTTCCATGCTTGCTATG 60.533 52.381 1.28 0.00 42.44 2.23
2646 2967 0.734889 GCGTGTTCCATGCTTGCTAT 59.265 50.000 1.28 0.00 42.44 2.97
2647 2968 0.605050 TGCGTGTTCCATGCTTGCTA 60.605 50.000 9.58 0.00 45.53 3.49
2648 2969 1.454572 TTGCGTGTTCCATGCTTGCT 61.455 50.000 9.58 0.00 45.53 3.91
2649 2970 0.597118 TTTGCGTGTTCCATGCTTGC 60.597 50.000 9.58 0.00 45.53 4.01
2650 2971 1.788308 CTTTTGCGTGTTCCATGCTTG 59.212 47.619 9.58 0.00 45.53 4.01
2651 2972 1.269726 CCTTTTGCGTGTTCCATGCTT 60.270 47.619 9.58 0.00 45.53 3.91
2652 2973 0.314935 CCTTTTGCGTGTTCCATGCT 59.685 50.000 9.58 0.00 45.53 3.79
2653 2974 1.284297 GCCTTTTGCGTGTTCCATGC 61.284 55.000 1.52 1.52 45.53 4.06
2654 2975 0.667184 GGCCTTTTGCGTGTTCCATG 60.667 55.000 0.00 0.00 42.61 3.66
2655 2976 1.112315 TGGCCTTTTGCGTGTTCCAT 61.112 50.000 3.32 0.00 42.61 3.41
2656 2977 1.323271 TTGGCCTTTTGCGTGTTCCA 61.323 50.000 3.32 0.00 42.61 3.53
2657 2978 0.597377 CTTGGCCTTTTGCGTGTTCC 60.597 55.000 3.32 0.00 42.61 3.62
2658 2979 0.383949 TCTTGGCCTTTTGCGTGTTC 59.616 50.000 3.32 0.00 42.61 3.18
2659 2980 1.000274 GATCTTGGCCTTTTGCGTGTT 60.000 47.619 3.32 0.00 42.61 3.32
2660 2981 0.598065 GATCTTGGCCTTTTGCGTGT 59.402 50.000 3.32 0.00 42.61 4.49
2661 2982 0.109132 GGATCTTGGCCTTTTGCGTG 60.109 55.000 3.32 0.00 42.61 5.34
2662 2983 0.539438 TGGATCTTGGCCTTTTGCGT 60.539 50.000 3.32 0.00 42.61 5.24
2663 2984 0.602562 TTGGATCTTGGCCTTTTGCG 59.397 50.000 3.32 0.00 42.61 4.85
2664 2985 2.299867 TCTTTGGATCTTGGCCTTTTGC 59.700 45.455 3.32 0.00 40.16 3.68
2665 2986 3.615834 GCTCTTTGGATCTTGGCCTTTTG 60.616 47.826 3.32 0.00 0.00 2.44
2666 2987 2.564504 GCTCTTTGGATCTTGGCCTTTT 59.435 45.455 3.32 0.00 0.00 2.27
2667 2988 2.174360 GCTCTTTGGATCTTGGCCTTT 58.826 47.619 3.32 0.00 0.00 3.11
2668 2989 1.076024 TGCTCTTTGGATCTTGGCCTT 59.924 47.619 3.32 0.00 0.00 4.35
2669 2990 0.700564 TGCTCTTTGGATCTTGGCCT 59.299 50.000 3.32 0.00 0.00 5.19
2670 2991 1.101331 CTGCTCTTTGGATCTTGGCC 58.899 55.000 0.00 0.00 0.00 5.36
2671 2992 1.742268 GACTGCTCTTTGGATCTTGGC 59.258 52.381 0.00 0.00 0.00 4.52
2672 2993 3.347077 AGACTGCTCTTTGGATCTTGG 57.653 47.619 0.00 0.00 0.00 3.61
2673 2994 4.187694 GGTAGACTGCTCTTTGGATCTTG 58.812 47.826 0.00 0.00 0.00 3.02
2674 2995 3.840666 TGGTAGACTGCTCTTTGGATCTT 59.159 43.478 0.00 0.00 0.00 2.40
2675 2996 3.445008 TGGTAGACTGCTCTTTGGATCT 58.555 45.455 0.00 0.00 0.00 2.75
2676 2997 3.895232 TGGTAGACTGCTCTTTGGATC 57.105 47.619 0.00 0.00 0.00 3.36
2677 2998 3.584848 ACTTGGTAGACTGCTCTTTGGAT 59.415 43.478 0.00 0.00 0.00 3.41
2678 2999 2.972713 ACTTGGTAGACTGCTCTTTGGA 59.027 45.455 0.00 0.00 0.00 3.53
2679 3000 3.070018 CACTTGGTAGACTGCTCTTTGG 58.930 50.000 0.00 0.00 0.00 3.28
2680 3001 3.733337 ACACTTGGTAGACTGCTCTTTG 58.267 45.455 0.00 0.00 0.00 2.77
2681 3002 4.423625 AACACTTGGTAGACTGCTCTTT 57.576 40.909 0.00 0.00 0.00 2.52
2682 3003 4.130118 CAAACACTTGGTAGACTGCTCTT 58.870 43.478 0.00 0.00 0.00 2.85
2683 3004 3.134804 ACAAACACTTGGTAGACTGCTCT 59.865 43.478 0.00 0.00 36.82 4.09
2684 3005 3.467803 ACAAACACTTGGTAGACTGCTC 58.532 45.455 0.00 0.00 36.82 4.26
2685 3006 3.560636 ACAAACACTTGGTAGACTGCT 57.439 42.857 0.00 0.00 36.82 4.24
2686 3007 4.142469 ACAAACAAACACTTGGTAGACTGC 60.142 41.667 0.00 0.00 36.82 4.40
2687 3008 5.560966 ACAAACAAACACTTGGTAGACTG 57.439 39.130 0.00 0.00 36.82 3.51
2688 3009 6.584185 AAACAAACAAACACTTGGTAGACT 57.416 33.333 0.00 0.00 36.82 3.24
2689 3010 6.864165 TGAAAACAAACAAACACTTGGTAGAC 59.136 34.615 0.00 0.00 36.82 2.59
2690 3011 6.982852 TGAAAACAAACAAACACTTGGTAGA 58.017 32.000 0.00 0.00 36.82 2.59
2691 3012 7.543868 TCATGAAAACAAACAAACACTTGGTAG 59.456 33.333 0.00 0.00 36.82 3.18
2692 3013 7.378966 TCATGAAAACAAACAAACACTTGGTA 58.621 30.769 0.00 0.00 36.82 3.25
2693 3014 6.226787 TCATGAAAACAAACAAACACTTGGT 58.773 32.000 0.00 0.00 36.82 3.67
2694 3015 6.718454 TCATGAAAACAAACAAACACTTGG 57.282 33.333 0.00 0.00 36.82 3.61
2695 3016 9.609950 AAAATCATGAAAACAAACAAACACTTG 57.390 25.926 0.00 0.00 38.61 3.16
2696 3017 9.824534 GAAAATCATGAAAACAAACAAACACTT 57.175 25.926 0.00 0.00 0.00 3.16
2697 3018 8.450180 GGAAAATCATGAAAACAAACAAACACT 58.550 29.630 0.00 0.00 0.00 3.55
2698 3019 8.233190 TGGAAAATCATGAAAACAAACAAACAC 58.767 29.630 0.00 0.00 0.00 3.32
2699 3020 8.233190 GTGGAAAATCATGAAAACAAACAAACA 58.767 29.630 0.00 0.00 0.00 2.83
2700 3021 8.233190 TGTGGAAAATCATGAAAACAAACAAAC 58.767 29.630 0.00 0.00 0.00 2.93
2701 3022 8.327941 TGTGGAAAATCATGAAAACAAACAAA 57.672 26.923 0.00 0.00 0.00 2.83
2702 3023 7.912056 TGTGGAAAATCATGAAAACAAACAA 57.088 28.000 0.00 0.00 0.00 2.83
2703 3024 8.503458 AATGTGGAAAATCATGAAAACAAACA 57.497 26.923 0.00 1.76 0.00 2.83
2707 3028 9.993454 TGATAAATGTGGAAAATCATGAAAACA 57.007 25.926 0.00 0.00 0.00 2.83
2711 3032 9.100554 GCAATGATAAATGTGGAAAATCATGAA 57.899 29.630 0.00 0.00 0.00 2.57
2712 3033 8.258708 TGCAATGATAAATGTGGAAAATCATGA 58.741 29.630 0.00 0.00 0.00 3.07
2713 3034 8.426881 TGCAATGATAAATGTGGAAAATCATG 57.573 30.769 0.00 0.00 0.00 3.07
2714 3035 8.479689 TCTGCAATGATAAATGTGGAAAATCAT 58.520 29.630 0.00 0.00 0.00 2.45
2715 3036 7.838884 TCTGCAATGATAAATGTGGAAAATCA 58.161 30.769 0.00 0.00 0.00 2.57
2716 3037 8.706492 TTCTGCAATGATAAATGTGGAAAATC 57.294 30.769 0.00 0.00 0.00 2.17
2717 3038 8.938906 GTTTCTGCAATGATAAATGTGGAAAAT 58.061 29.630 0.00 0.00 0.00 1.82
2718 3039 8.149647 AGTTTCTGCAATGATAAATGTGGAAAA 58.850 29.630 0.00 0.00 0.00 2.29
2719 3040 7.669427 AGTTTCTGCAATGATAAATGTGGAAA 58.331 30.769 0.00 0.00 0.00 3.13
2720 3041 7.177216 AGAGTTTCTGCAATGATAAATGTGGAA 59.823 33.333 0.00 0.00 0.00 3.53
2721 3042 6.660521 AGAGTTTCTGCAATGATAAATGTGGA 59.339 34.615 0.00 0.00 0.00 4.02
2722 3043 6.860080 AGAGTTTCTGCAATGATAAATGTGG 58.140 36.000 0.00 0.00 0.00 4.17
2725 3046 9.674824 GGATAAGAGTTTCTGCAATGATAAATG 57.325 33.333 0.00 0.00 0.00 2.32
2726 3047 9.412460 TGGATAAGAGTTTCTGCAATGATAAAT 57.588 29.630 0.00 0.00 0.00 1.40
2727 3048 8.677300 GTGGATAAGAGTTTCTGCAATGATAAA 58.323 33.333 0.00 0.00 0.00 1.40
2728 3049 7.828717 TGTGGATAAGAGTTTCTGCAATGATAA 59.171 33.333 0.00 0.00 0.00 1.75
2729 3050 7.337938 TGTGGATAAGAGTTTCTGCAATGATA 58.662 34.615 0.00 0.00 0.00 2.15
2730 3051 6.182627 TGTGGATAAGAGTTTCTGCAATGAT 58.817 36.000 0.00 0.00 0.00 2.45
2731 3052 5.559770 TGTGGATAAGAGTTTCTGCAATGA 58.440 37.500 0.00 0.00 0.00 2.57
2732 3053 5.885230 TGTGGATAAGAGTTTCTGCAATG 57.115 39.130 0.00 0.00 0.00 2.82
2733 3054 6.899393 TTTGTGGATAAGAGTTTCTGCAAT 57.101 33.333 0.00 0.00 0.00 3.56
2734 3055 6.899393 ATTTGTGGATAAGAGTTTCTGCAA 57.101 33.333 0.00 0.00 0.00 4.08
2735 3056 6.071952 GGAATTTGTGGATAAGAGTTTCTGCA 60.072 38.462 0.00 0.00 0.00 4.41
2736 3057 6.325596 GGAATTTGTGGATAAGAGTTTCTGC 58.674 40.000 0.00 0.00 0.00 4.26
2737 3058 6.403636 CGGGAATTTGTGGATAAGAGTTTCTG 60.404 42.308 0.00 0.00 0.00 3.02
2738 3059 5.648092 CGGGAATTTGTGGATAAGAGTTTCT 59.352 40.000 0.00 0.00 0.00 2.52
2739 3060 5.676331 GCGGGAATTTGTGGATAAGAGTTTC 60.676 44.000 0.00 0.00 0.00 2.78
2740 3061 4.157840 GCGGGAATTTGTGGATAAGAGTTT 59.842 41.667 0.00 0.00 0.00 2.66
2741 3062 3.694566 GCGGGAATTTGTGGATAAGAGTT 59.305 43.478 0.00 0.00 0.00 3.01
2742 3063 3.279434 GCGGGAATTTGTGGATAAGAGT 58.721 45.455 0.00 0.00 0.00 3.24
2743 3064 3.278574 TGCGGGAATTTGTGGATAAGAG 58.721 45.455 0.00 0.00 0.00 2.85
2744 3065 3.278574 CTGCGGGAATTTGTGGATAAGA 58.721 45.455 0.00 0.00 0.00 2.10
2745 3066 3.016736 ACTGCGGGAATTTGTGGATAAG 58.983 45.455 0.00 0.00 0.00 1.73
2746 3067 3.080300 ACTGCGGGAATTTGTGGATAA 57.920 42.857 0.00 0.00 0.00 1.75
2747 3068 2.799126 ACTGCGGGAATTTGTGGATA 57.201 45.000 0.00 0.00 0.00 2.59
2748 3069 2.752903 GTTACTGCGGGAATTTGTGGAT 59.247 45.455 0.00 0.00 0.00 3.41
2749 3070 2.156098 GTTACTGCGGGAATTTGTGGA 58.844 47.619 0.00 0.00 0.00 4.02
2750 3071 1.135803 CGTTACTGCGGGAATTTGTGG 60.136 52.381 0.00 0.00 0.00 4.17
2751 3072 1.727857 GCGTTACTGCGGGAATTTGTG 60.728 52.381 0.00 0.00 0.00 3.33
2752 3073 0.519961 GCGTTACTGCGGGAATTTGT 59.480 50.000 0.00 0.00 0.00 2.83
2753 3074 3.306206 GCGTTACTGCGGGAATTTG 57.694 52.632 0.00 0.00 0.00 2.32
2762 3083 4.799824 TACCCCGCGCGTTACTGC 62.800 66.667 29.95 0.00 0.00 4.40
2763 3084 2.882301 GTACCCCGCGCGTTACTG 60.882 66.667 29.95 12.82 0.00 2.74
2764 3085 4.133796 GGTACCCCGCGCGTTACT 62.134 66.667 29.95 10.35 0.00 2.24
2765 3086 3.721557 ATGGTACCCCGCGCGTTAC 62.722 63.158 29.95 23.73 0.00 2.50
2766 3087 3.429080 GATGGTACCCCGCGCGTTA 62.429 63.158 29.95 13.87 0.00 3.18
2767 3088 4.825252 GATGGTACCCCGCGCGTT 62.825 66.667 29.95 14.98 0.00 4.84
2769 3090 3.553437 CTAGATGGTACCCCGCGCG 62.553 68.421 25.67 25.67 0.00 6.86
2770 3091 2.024590 AACTAGATGGTACCCCGCGC 62.025 60.000 10.07 0.00 0.00 6.86
2771 3092 1.321474 TAACTAGATGGTACCCCGCG 58.679 55.000 10.07 0.00 0.00 6.46
2772 3093 2.895404 TGATAACTAGATGGTACCCCGC 59.105 50.000 10.07 0.00 0.00 6.13
2773 3094 4.342951 TGTTGATAACTAGATGGTACCCCG 59.657 45.833 10.07 0.00 0.00 5.73
2774 3095 5.881923 TGTTGATAACTAGATGGTACCCC 57.118 43.478 10.07 0.88 0.00 4.95
2779 3100 9.261180 CGTCATTATTGTTGATAACTAGATGGT 57.739 33.333 0.00 0.00 33.20 3.55
2780 3101 8.223769 GCGTCATTATTGTTGATAACTAGATGG 58.776 37.037 0.00 0.00 33.20 3.51
2781 3102 8.982685 AGCGTCATTATTGTTGATAACTAGATG 58.017 33.333 0.00 0.00 33.20 2.90
2786 3107 9.325198 TGAATAGCGTCATTATTGTTGATAACT 57.675 29.630 0.00 0.00 33.20 2.24
2787 3108 9.929722 TTGAATAGCGTCATTATTGTTGATAAC 57.070 29.630 0.00 0.00 33.20 1.89
2789 3110 9.541143 TCTTGAATAGCGTCATTATTGTTGATA 57.459 29.630 0.00 0.00 0.00 2.15
2790 3111 8.437360 TCTTGAATAGCGTCATTATTGTTGAT 57.563 30.769 0.00 0.00 0.00 2.57
2791 3112 7.841915 TCTTGAATAGCGTCATTATTGTTGA 57.158 32.000 0.00 0.00 0.00 3.18
2792 3113 8.390354 TCTTCTTGAATAGCGTCATTATTGTTG 58.610 33.333 0.00 0.00 0.00 3.33
2793 3114 8.492673 TCTTCTTGAATAGCGTCATTATTGTT 57.507 30.769 0.00 0.00 0.00 2.83
2794 3115 7.225538 CCTCTTCTTGAATAGCGTCATTATTGT 59.774 37.037 0.00 0.00 0.00 2.71
2795 3116 7.225538 ACCTCTTCTTGAATAGCGTCATTATTG 59.774 37.037 0.00 0.00 0.00 1.90
2796 3117 7.275920 ACCTCTTCTTGAATAGCGTCATTATT 58.724 34.615 0.00 0.00 0.00 1.40
2797 3118 6.821388 ACCTCTTCTTGAATAGCGTCATTAT 58.179 36.000 0.00 0.00 0.00 1.28
2798 3119 6.222038 ACCTCTTCTTGAATAGCGTCATTA 57.778 37.500 0.00 0.00 0.00 1.90
2799 3120 5.091261 ACCTCTTCTTGAATAGCGTCATT 57.909 39.130 0.00 0.00 0.00 2.57
2800 3121 4.744795 ACCTCTTCTTGAATAGCGTCAT 57.255 40.909 0.00 0.00 0.00 3.06
2801 3122 4.948004 TCTACCTCTTCTTGAATAGCGTCA 59.052 41.667 0.00 0.00 0.00 4.35
2802 3123 5.502153 TCTACCTCTTCTTGAATAGCGTC 57.498 43.478 0.00 0.00 0.00 5.19
2803 3124 5.916661 TTCTACCTCTTCTTGAATAGCGT 57.083 39.130 0.00 0.00 0.00 5.07
2804 3125 6.254589 CAGTTTCTACCTCTTCTTGAATAGCG 59.745 42.308 0.00 0.00 0.00 4.26
2805 3126 7.100409 ACAGTTTCTACCTCTTCTTGAATAGC 58.900 38.462 0.00 0.00 0.00 2.97
2806 3127 8.307483 TGACAGTTTCTACCTCTTCTTGAATAG 58.693 37.037 0.00 0.00 0.00 1.73
2807 3128 8.190326 TGACAGTTTCTACCTCTTCTTGAATA 57.810 34.615 0.00 0.00 0.00 1.75
2808 3129 7.067496 TGACAGTTTCTACCTCTTCTTGAAT 57.933 36.000 0.00 0.00 0.00 2.57
2809 3130 6.479972 TGACAGTTTCTACCTCTTCTTGAA 57.520 37.500 0.00 0.00 0.00 2.69
2810 3131 6.479972 TTGACAGTTTCTACCTCTTCTTGA 57.520 37.500 0.00 0.00 0.00 3.02
2811 3132 6.348050 GCATTGACAGTTTCTACCTCTTCTTG 60.348 42.308 0.00 0.00 0.00 3.02
2812 3133 5.703130 GCATTGACAGTTTCTACCTCTTCTT 59.297 40.000 0.00 0.00 0.00 2.52
2813 3134 5.012561 AGCATTGACAGTTTCTACCTCTTCT 59.987 40.000 0.00 0.00 0.00 2.85
2814 3135 5.241662 AGCATTGACAGTTTCTACCTCTTC 58.758 41.667 0.00 0.00 0.00 2.87
2815 3136 5.234466 AGCATTGACAGTTTCTACCTCTT 57.766 39.130 0.00 0.00 0.00 2.85
2816 3137 4.899352 AGCATTGACAGTTTCTACCTCT 57.101 40.909 0.00 0.00 0.00 3.69
2817 3138 7.435068 TTTTAGCATTGACAGTTTCTACCTC 57.565 36.000 0.00 0.00 0.00 3.85
2818 3139 8.409358 AATTTTAGCATTGACAGTTTCTACCT 57.591 30.769 0.00 0.00 0.00 3.08
2834 3155 9.868277 CCATGGTTGTCTTAATTAATTTTAGCA 57.132 29.630 5.91 5.00 0.00 3.49
2835 3156 9.313118 CCCATGGTTGTCTTAATTAATTTTAGC 57.687 33.333 11.73 2.83 0.00 3.09
2838 3159 7.606073 GCACCCATGGTTGTCTTAATTAATTTT 59.394 33.333 11.36 0.00 31.02 1.82
2839 3160 7.102993 GCACCCATGGTTGTCTTAATTAATTT 58.897 34.615 11.36 0.00 31.02 1.82
2840 3161 6.212388 TGCACCCATGGTTGTCTTAATTAATT 59.788 34.615 11.36 5.89 31.02 1.40
2841 3162 5.719085 TGCACCCATGGTTGTCTTAATTAAT 59.281 36.000 11.36 0.00 31.02 1.40
2842 3163 5.080337 TGCACCCATGGTTGTCTTAATTAA 58.920 37.500 11.36 0.00 31.02 1.40
2843 3164 4.667573 TGCACCCATGGTTGTCTTAATTA 58.332 39.130 11.36 0.00 31.02 1.40
2844 3165 3.505386 TGCACCCATGGTTGTCTTAATT 58.495 40.909 11.36 0.00 31.02 1.40
2845 3166 3.168035 TGCACCCATGGTTGTCTTAAT 57.832 42.857 11.36 0.00 31.02 1.40
2846 3167 2.666272 TGCACCCATGGTTGTCTTAA 57.334 45.000 11.36 0.00 31.02 1.85
2847 3168 2.666272 TTGCACCCATGGTTGTCTTA 57.334 45.000 11.36 0.00 31.02 2.10
2848 3169 1.786937 TTTGCACCCATGGTTGTCTT 58.213 45.000 11.36 0.00 31.02 3.01
2849 3170 1.786937 TTTTGCACCCATGGTTGTCT 58.213 45.000 11.36 0.00 31.02 3.41
2850 3171 2.837532 ATTTTGCACCCATGGTTGTC 57.162 45.000 11.36 4.11 31.02 3.18
2851 3172 2.705127 AGAATTTTGCACCCATGGTTGT 59.295 40.909 11.36 0.00 31.02 3.32
2852 3173 3.405823 AGAATTTTGCACCCATGGTTG 57.594 42.857 11.73 8.19 31.02 3.77
2853 3174 4.531732 ACATAGAATTTTGCACCCATGGTT 59.468 37.500 11.73 0.00 31.02 3.67
2854 3175 4.095946 ACATAGAATTTTGCACCCATGGT 58.904 39.130 11.73 0.00 35.62 3.55
2855 3176 4.685924 GACATAGAATTTTGCACCCATGG 58.314 43.478 4.14 4.14 0.00 3.66
2856 3177 4.142403 ACGACATAGAATTTTGCACCCATG 60.142 41.667 0.00 0.00 0.00 3.66
2857 3178 4.016444 ACGACATAGAATTTTGCACCCAT 58.984 39.130 0.00 0.00 0.00 4.00
2858 3179 3.417101 ACGACATAGAATTTTGCACCCA 58.583 40.909 0.00 0.00 0.00 4.51
2859 3180 4.434713 AACGACATAGAATTTTGCACCC 57.565 40.909 0.00 0.00 0.00 4.61
2860 3181 5.699839 AGAAACGACATAGAATTTTGCACC 58.300 37.500 0.00 0.00 0.00 5.01
2861 3182 8.015658 ACTAAGAAACGACATAGAATTTTGCAC 58.984 33.333 0.00 0.00 0.00 4.57
2862 3183 8.094798 ACTAAGAAACGACATAGAATTTTGCA 57.905 30.769 0.00 0.00 0.00 4.08
2863 3184 8.227791 TGACTAAGAAACGACATAGAATTTTGC 58.772 33.333 0.00 0.00 0.00 3.68
2866 3187 8.718734 GGTTGACTAAGAAACGACATAGAATTT 58.281 33.333 0.00 0.00 0.00 1.82
2867 3188 8.095169 AGGTTGACTAAGAAACGACATAGAATT 58.905 33.333 0.00 0.00 0.00 2.17
2868 3189 7.612677 AGGTTGACTAAGAAACGACATAGAAT 58.387 34.615 0.00 0.00 0.00 2.40
2869 3190 6.989659 AGGTTGACTAAGAAACGACATAGAA 58.010 36.000 0.00 0.00 0.00 2.10
2870 3191 6.585695 AGGTTGACTAAGAAACGACATAGA 57.414 37.500 0.00 0.00 0.00 1.98
2871 3192 8.928270 ATAAGGTTGACTAAGAAACGACATAG 57.072 34.615 0.00 0.00 0.00 2.23
2873 3194 9.715121 TTTATAAGGTTGACTAAGAAACGACAT 57.285 29.630 0.00 0.00 0.00 3.06
2874 3195 9.545105 TTTTATAAGGTTGACTAAGAAACGACA 57.455 29.630 0.00 0.00 0.00 4.35
2875 3196 9.803130 GTTTTATAAGGTTGACTAAGAAACGAC 57.197 33.333 0.00 0.00 0.00 4.34
2876 3197 9.768662 AGTTTTATAAGGTTGACTAAGAAACGA 57.231 29.630 0.00 0.00 0.00 3.85
2885 3206 9.939802 ATCGTCTTTAGTTTTATAAGGTTGACT 57.060 29.630 0.00 0.00 0.00 3.41
2886 3207 9.968743 CATCGTCTTTAGTTTTATAAGGTTGAC 57.031 33.333 0.00 0.00 0.00 3.18
2887 3208 9.932207 TCATCGTCTTTAGTTTTATAAGGTTGA 57.068 29.630 0.00 0.00 0.00 3.18
2897 3218 9.092876 TGCAAAATTTTCATCGTCTTTAGTTTT 57.907 25.926 0.00 0.00 0.00 2.43
2898 3219 8.641499 TGCAAAATTTTCATCGTCTTTAGTTT 57.359 26.923 0.00 0.00 0.00 2.66
2899 3220 8.641499 TTGCAAAATTTTCATCGTCTTTAGTT 57.359 26.923 0.00 0.00 0.00 2.24
2900 3221 8.641499 TTTGCAAAATTTTCATCGTCTTTAGT 57.359 26.923 10.02 0.00 0.00 2.24
2901 3222 9.913451 TTTTTGCAAAATTTTCATCGTCTTTAG 57.087 25.926 24.39 0.00 0.00 1.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.