Multiple sequence alignment - TraesCS4B01G008800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G008800 chr4B 100.000 2636 0 0 1 2636 5535366 5532731 0.000000e+00 4868.0
1 TraesCS4B01G008800 chrUn 87.586 1595 131 31 853 2401 60956567 60954994 0.000000e+00 1786.0
2 TraesCS4B01G008800 chrUn 86.978 1436 150 22 997 2412 60947716 60946298 0.000000e+00 1581.0
3 TraesCS4B01G008800 chrUn 77.165 635 129 8 1000 1620 60928706 60929338 3.230000e-94 355.0
4 TraesCS4B01G008800 chrUn 93.889 180 10 1 2457 2636 60944265 60944087 1.200000e-68 270.0
5 TraesCS4B01G008800 chrUn 88.000 150 12 4 2487 2634 60931622 60931477 3.490000e-39 172.0
6 TraesCS4B01G008800 chrUn 88.312 77 9 0 633 709 60956778 60956702 2.790000e-15 93.5
7 TraesCS4B01G008800 chrUn 89.706 68 7 0 404 471 60956925 60956858 1.300000e-13 87.9
8 TraesCS4B01G008800 chr4A 86.707 1482 151 29 997 2449 601181240 601179776 0.000000e+00 1604.0
9 TraesCS4B01G008800 chr4A 91.457 1112 63 13 849 1944 601194906 601193811 0.000000e+00 1498.0
10 TraesCS4B01G008800 chr4A 77.077 650 127 15 1000 1632 601156436 601157080 3.230000e-94 355.0
11 TraesCS4B01G008800 chr4A 96.296 162 5 1 2452 2613 601179115 601178955 5.590000e-67 265.0
12 TraesCS4B01G008800 chr4A 83.140 172 15 7 214 384 601195495 601195337 7.600000e-31 145.0
13 TraesCS4B01G008800 chr4A 80.423 189 21 6 404 591 601195277 601195104 2.130000e-26 130.0
14 TraesCS4B01G008800 chr4A 85.897 78 11 0 1025 1102 601161282 601161359 1.680000e-12 84.2
15 TraesCS4B01G008800 chr4A 85.714 77 11 0 633 709 601195112 601195036 6.050000e-12 82.4
16 TraesCS4B01G008800 chr5D 83.333 660 83 20 997 1632 412448817 412449473 3.780000e-163 584.0
17 TraesCS4B01G008800 chr5D 80.142 141 23 5 214 353 489686239 489686103 1.670000e-17 100.0
18 TraesCS4B01G008800 chr5B 82.931 662 85 18 997 1632 496549735 496550394 2.940000e-159 571.0
19 TraesCS4B01G008800 chr5B 82.362 669 82 21 997 1632 496806032 496806697 1.380000e-152 549.0
20 TraesCS4B01G008800 chr5B 80.000 140 24 4 214 353 603691602 603691467 1.670000e-17 100.0
21 TraesCS4B01G008800 chr7B 83.571 140 18 3 214 353 477814835 477814969 2.750000e-25 126.0
22 TraesCS4B01G008800 chr1D 81.757 148 24 2 213 360 53956891 53956747 1.280000e-23 121.0
23 TraesCS4B01G008800 chr7A 80.882 136 22 3 214 347 674819321 674819454 1.290000e-18 104.0
24 TraesCS4B01G008800 chr1B 79.577 142 25 4 214 353 646931244 646931105 6.000000e-17 99.0
25 TraesCS4B01G008800 chr1A 91.429 70 6 0 284 353 49102561 49102630 2.160000e-16 97.1
26 TraesCS4B01G008800 chr1A 78.169 142 27 2 214 353 297698245 297698384 1.300000e-13 87.9
27 TraesCS4B01G008800 chr6B 85.106 94 12 2 262 354 632421326 632421418 7.770000e-16 95.3


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G008800 chr4B 5532731 5535366 2635 True 4868.00 4868 100.000000 1 2636 1 chr4B.!!$R1 2635
1 TraesCS4B01G008800 chrUn 60944087 60947716 3629 True 925.50 1581 90.433500 997 2636 2 chrUn.!!$R2 1639
2 TraesCS4B01G008800 chrUn 60954994 60956925 1931 True 655.80 1786 88.534667 404 2401 3 chrUn.!!$R3 1997
3 TraesCS4B01G008800 chrUn 60928706 60929338 632 False 355.00 355 77.165000 1000 1620 1 chrUn.!!$F1 620
4 TraesCS4B01G008800 chr4A 601178955 601181240 2285 True 934.50 1604 91.501500 997 2613 2 chr4A.!!$R1 1616
5 TraesCS4B01G008800 chr4A 601193811 601195495 1684 True 463.85 1498 85.183500 214 1944 4 chr4A.!!$R2 1730
6 TraesCS4B01G008800 chr4A 601156436 601157080 644 False 355.00 355 77.077000 1000 1632 1 chr4A.!!$F1 632
7 TraesCS4B01G008800 chr5D 412448817 412449473 656 False 584.00 584 83.333000 997 1632 1 chr5D.!!$F1 635
8 TraesCS4B01G008800 chr5B 496549735 496550394 659 False 571.00 571 82.931000 997 1632 1 chr5B.!!$F1 635
9 TraesCS4B01G008800 chr5B 496806032 496806697 665 False 549.00 549 82.362000 997 1632 1 chr5B.!!$F2 635

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
965 1054 0.029834 CACAAGCACCAGCAACAGAC 59.97 55.0 0.0 0.0 45.49 3.51 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2573 5014 0.030504 CGCATGTTGTGGCTTGTGAA 59.969 50.0 0.0 0.0 0.0 3.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 27 7.665690 AGAGAAGCTACACTATCAATATGTGG 58.334 38.462 0.00 0.00 36.16 4.17
27 28 7.507277 AGAGAAGCTACACTATCAATATGTGGA 59.493 37.037 0.00 0.00 36.16 4.02
28 29 7.665690 AGAAGCTACACTATCAATATGTGGAG 58.334 38.462 0.00 0.00 43.46 3.86
29 30 7.507277 AGAAGCTACACTATCAATATGTGGAGA 59.493 37.037 8.56 0.00 43.34 3.71
30 31 7.789202 AGCTACACTATCAATATGTGGAGAT 57.211 36.000 8.56 0.00 43.34 2.75
31 32 8.200024 AGCTACACTATCAATATGTGGAGATT 57.800 34.615 8.56 0.00 43.34 2.40
32 33 8.654997 AGCTACACTATCAATATGTGGAGATTT 58.345 33.333 8.56 0.00 43.34 2.17
33 34 9.277783 GCTACACTATCAATATGTGGAGATTTT 57.722 33.333 8.56 0.00 43.34 1.82
35 36 8.455903 ACACTATCAATATGTGGAGATTTTGG 57.544 34.615 0.00 0.00 36.16 3.28
36 37 8.055181 ACACTATCAATATGTGGAGATTTTGGT 58.945 33.333 0.00 0.00 36.16 3.67
37 38 9.559732 CACTATCAATATGTGGAGATTTTGGTA 57.440 33.333 0.00 0.00 0.00 3.25
38 39 9.561069 ACTATCAATATGTGGAGATTTTGGTAC 57.439 33.333 0.00 0.00 0.00 3.34
39 40 9.559732 CTATCAATATGTGGAGATTTTGGTACA 57.440 33.333 0.00 0.00 0.00 2.90
41 42 8.821686 TCAATATGTGGAGATTTTGGTACATT 57.178 30.769 0.00 0.00 39.30 2.71
42 43 8.685427 TCAATATGTGGAGATTTTGGTACATTG 58.315 33.333 0.00 0.00 39.30 2.82
43 44 8.469200 CAATATGTGGAGATTTTGGTACATTGT 58.531 33.333 0.00 0.00 39.30 2.71
44 45 9.693739 AATATGTGGAGATTTTGGTACATTGTA 57.306 29.630 0.00 0.00 39.30 2.41
45 46 9.693739 ATATGTGGAGATTTTGGTACATTGTAA 57.306 29.630 0.00 0.00 39.30 2.41
46 47 7.447374 TGTGGAGATTTTGGTACATTGTAAG 57.553 36.000 0.00 0.00 39.30 2.34
47 48 7.227873 TGTGGAGATTTTGGTACATTGTAAGA 58.772 34.615 0.00 0.00 39.30 2.10
48 49 7.888021 TGTGGAGATTTTGGTACATTGTAAGAT 59.112 33.333 0.00 0.00 39.30 2.40
49 50 8.739972 GTGGAGATTTTGGTACATTGTAAGATT 58.260 33.333 0.00 0.00 39.30 2.40
50 51 8.739039 TGGAGATTTTGGTACATTGTAAGATTG 58.261 33.333 0.00 0.00 39.30 2.67
51 52 8.190784 GGAGATTTTGGTACATTGTAAGATTGG 58.809 37.037 0.00 0.00 39.30 3.16
52 53 8.877864 AGATTTTGGTACATTGTAAGATTGGA 57.122 30.769 0.00 0.00 39.30 3.53
53 54 8.739972 AGATTTTGGTACATTGTAAGATTGGAC 58.260 33.333 0.00 0.00 39.30 4.02
54 55 8.650143 ATTTTGGTACATTGTAAGATTGGACT 57.350 30.769 0.00 0.00 39.30 3.85
55 56 9.747898 ATTTTGGTACATTGTAAGATTGGACTA 57.252 29.630 0.00 0.00 39.30 2.59
56 57 8.786826 TTTGGTACATTGTAAGATTGGACTAG 57.213 34.615 0.00 0.00 39.30 2.57
57 58 7.490657 TGGTACATTGTAAGATTGGACTAGT 57.509 36.000 0.00 0.00 0.00 2.57
58 59 7.327975 TGGTACATTGTAAGATTGGACTAGTG 58.672 38.462 0.00 0.00 0.00 2.74
59 60 6.258068 GGTACATTGTAAGATTGGACTAGTGC 59.742 42.308 7.56 7.56 0.00 4.40
60 61 5.186198 ACATTGTAAGATTGGACTAGTGCC 58.814 41.667 12.28 8.04 0.00 5.01
61 62 4.901197 TTGTAAGATTGGACTAGTGCCA 57.099 40.909 12.28 10.54 0.00 4.92
62 63 4.202245 TGTAAGATTGGACTAGTGCCAC 57.798 45.455 12.28 3.45 34.56 5.01
63 64 3.580895 TGTAAGATTGGACTAGTGCCACA 59.419 43.478 12.28 3.87 34.56 4.17
64 65 3.788227 AAGATTGGACTAGTGCCACAA 57.212 42.857 12.28 6.64 34.56 3.33
65 66 3.340814 AGATTGGACTAGTGCCACAAG 57.659 47.619 12.28 0.00 34.56 3.16
66 67 2.639839 AGATTGGACTAGTGCCACAAGT 59.360 45.455 12.28 0.96 34.56 3.16
67 68 3.838317 AGATTGGACTAGTGCCACAAGTA 59.162 43.478 12.28 0.00 34.56 2.24
68 69 4.471386 AGATTGGACTAGTGCCACAAGTAT 59.529 41.667 12.28 4.04 34.56 2.12
69 70 3.610040 TGGACTAGTGCCACAAGTATG 57.390 47.619 12.28 0.00 0.00 2.39
70 71 2.903784 TGGACTAGTGCCACAAGTATGT 59.096 45.455 12.28 0.00 41.61 2.29
71 72 3.326588 TGGACTAGTGCCACAAGTATGTT 59.673 43.478 12.28 0.00 37.82 2.71
72 73 3.684788 GGACTAGTGCCACAAGTATGTTG 59.315 47.826 0.00 0.00 37.82 3.33
73 74 4.562757 GGACTAGTGCCACAAGTATGTTGA 60.563 45.833 0.00 0.00 37.82 3.18
74 75 4.968259 ACTAGTGCCACAAGTATGTTGAA 58.032 39.130 0.00 0.00 37.82 2.69
75 76 5.560724 ACTAGTGCCACAAGTATGTTGAAT 58.439 37.500 0.00 0.00 37.82 2.57
76 77 6.003950 ACTAGTGCCACAAGTATGTTGAATT 58.996 36.000 0.00 0.00 37.82 2.17
77 78 5.125100 AGTGCCACAAGTATGTTGAATTG 57.875 39.130 0.00 0.00 37.82 2.32
78 79 3.674753 GTGCCACAAGTATGTTGAATTGC 59.325 43.478 0.00 0.00 37.82 3.56
79 80 3.573538 TGCCACAAGTATGTTGAATTGCT 59.426 39.130 0.00 0.00 37.82 3.91
80 81 4.039004 TGCCACAAGTATGTTGAATTGCTT 59.961 37.500 0.00 0.00 37.82 3.91
81 82 4.990426 GCCACAAGTATGTTGAATTGCTTT 59.010 37.500 0.00 0.00 37.82 3.51
82 83 5.107375 GCCACAAGTATGTTGAATTGCTTTG 60.107 40.000 0.00 0.00 37.82 2.77
83 84 6.215121 CCACAAGTATGTTGAATTGCTTTGA 58.785 36.000 0.00 0.00 37.82 2.69
84 85 6.364165 CCACAAGTATGTTGAATTGCTTTGAG 59.636 38.462 0.00 0.00 37.82 3.02
85 86 6.919662 CACAAGTATGTTGAATTGCTTTGAGT 59.080 34.615 0.00 0.00 37.82 3.41
86 87 7.436080 CACAAGTATGTTGAATTGCTTTGAGTT 59.564 33.333 0.00 0.00 37.82 3.01
87 88 7.981225 ACAAGTATGTTGAATTGCTTTGAGTTT 59.019 29.630 0.00 0.00 35.91 2.66
88 89 8.819974 CAAGTATGTTGAATTGCTTTGAGTTTT 58.180 29.630 0.00 0.00 0.00 2.43
89 90 8.947055 AGTATGTTGAATTGCTTTGAGTTTTT 57.053 26.923 0.00 0.00 0.00 1.94
90 91 8.819974 AGTATGTTGAATTGCTTTGAGTTTTTG 58.180 29.630 0.00 0.00 0.00 2.44
91 92 6.419980 TGTTGAATTGCTTTGAGTTTTTGG 57.580 33.333 0.00 0.00 0.00 3.28
92 93 5.936956 TGTTGAATTGCTTTGAGTTTTTGGT 59.063 32.000 0.00 0.00 0.00 3.67
93 94 7.099764 TGTTGAATTGCTTTGAGTTTTTGGTA 58.900 30.769 0.00 0.00 0.00 3.25
94 95 7.064016 TGTTGAATTGCTTTGAGTTTTTGGTAC 59.936 33.333 0.00 0.00 0.00 3.34
95 96 6.634805 TGAATTGCTTTGAGTTTTTGGTACA 58.365 32.000 0.00 0.00 0.00 2.90
96 97 6.756074 TGAATTGCTTTGAGTTTTTGGTACAG 59.244 34.615 0.00 0.00 42.39 2.74
97 98 5.652994 TTGCTTTGAGTTTTTGGTACAGT 57.347 34.783 0.00 0.00 42.39 3.55
98 99 5.243426 TGCTTTGAGTTTTTGGTACAGTC 57.757 39.130 0.00 0.00 42.39 3.51
99 100 4.947388 TGCTTTGAGTTTTTGGTACAGTCT 59.053 37.500 0.00 0.00 42.39 3.24
100 101 6.116806 TGCTTTGAGTTTTTGGTACAGTCTA 58.883 36.000 0.00 0.00 42.39 2.59
101 102 6.600032 TGCTTTGAGTTTTTGGTACAGTCTAA 59.400 34.615 0.00 0.00 42.39 2.10
102 103 7.132863 GCTTTGAGTTTTTGGTACAGTCTAAG 58.867 38.462 0.00 0.63 42.39 2.18
103 104 7.012044 GCTTTGAGTTTTTGGTACAGTCTAAGA 59.988 37.037 10.98 0.00 42.39 2.10
104 105 8.974060 TTTGAGTTTTTGGTACAGTCTAAGAT 57.026 30.769 0.00 0.00 42.39 2.40
105 106 8.974060 TTGAGTTTTTGGTACAGTCTAAGATT 57.026 30.769 0.00 0.00 42.39 2.40
106 107 8.974060 TGAGTTTTTGGTACAGTCTAAGATTT 57.026 30.769 0.00 0.00 42.39 2.17
107 108 9.403583 TGAGTTTTTGGTACAGTCTAAGATTTT 57.596 29.630 0.00 0.00 42.39 1.82
108 109 9.880064 GAGTTTTTGGTACAGTCTAAGATTTTC 57.120 33.333 0.00 0.00 42.39 2.29
109 110 9.628500 AGTTTTTGGTACAGTCTAAGATTTTCT 57.372 29.630 0.00 0.00 42.39 2.52
112 113 8.974060 TTTGGTACAGTCTAAGATTTTCTTGT 57.026 30.769 0.00 0.00 42.39 3.16
113 114 8.603242 TTGGTACAGTCTAAGATTTTCTTGTC 57.397 34.615 0.00 0.00 42.39 3.18
114 115 7.732025 TGGTACAGTCTAAGATTTTCTTGTCA 58.268 34.615 0.00 0.00 37.29 3.58
115 116 7.872993 TGGTACAGTCTAAGATTTTCTTGTCAG 59.127 37.037 0.00 0.00 37.29 3.51
116 117 6.793492 ACAGTCTAAGATTTTCTTGTCAGC 57.207 37.500 0.07 0.00 37.29 4.26
117 118 5.406780 ACAGTCTAAGATTTTCTTGTCAGCG 59.593 40.000 0.07 0.00 37.29 5.18
118 119 4.390297 AGTCTAAGATTTTCTTGTCAGCGC 59.610 41.667 0.00 0.00 37.29 5.92
119 120 4.152402 GTCTAAGATTTTCTTGTCAGCGCA 59.848 41.667 11.47 0.00 37.29 6.09
120 121 3.988379 AAGATTTTCTTGTCAGCGCAA 57.012 38.095 11.47 0.00 34.98 4.85
121 122 4.510038 AAGATTTTCTTGTCAGCGCAAT 57.490 36.364 11.47 0.00 34.98 3.56
122 123 3.829948 AGATTTTCTTGTCAGCGCAATG 58.170 40.909 11.47 0.00 0.00 2.82
123 124 3.503363 AGATTTTCTTGTCAGCGCAATGA 59.497 39.130 11.47 1.74 0.00 2.57
124 125 3.706802 TTTTCTTGTCAGCGCAATGAA 57.293 38.095 11.47 3.53 0.00 2.57
125 126 3.706802 TTTCTTGTCAGCGCAATGAAA 57.293 38.095 11.47 9.39 0.00 2.69
126 127 3.921119 TTCTTGTCAGCGCAATGAAAT 57.079 38.095 11.47 0.00 0.00 2.17
127 128 3.476295 TCTTGTCAGCGCAATGAAATC 57.524 42.857 11.47 0.00 0.00 2.17
128 129 3.076621 TCTTGTCAGCGCAATGAAATCT 58.923 40.909 11.47 0.00 0.00 2.40
129 130 4.252878 TCTTGTCAGCGCAATGAAATCTA 58.747 39.130 11.47 0.00 0.00 1.98
130 131 4.694982 TCTTGTCAGCGCAATGAAATCTAA 59.305 37.500 11.47 0.00 0.00 2.10
131 132 4.604843 TGTCAGCGCAATGAAATCTAAG 57.395 40.909 11.47 0.00 0.00 2.18
132 133 4.252878 TGTCAGCGCAATGAAATCTAAGA 58.747 39.130 11.47 0.00 0.00 2.10
133 134 4.877823 TGTCAGCGCAATGAAATCTAAGAT 59.122 37.500 11.47 0.00 0.00 2.40
134 135 5.355071 TGTCAGCGCAATGAAATCTAAGATT 59.645 36.000 11.47 0.00 0.00 2.40
135 136 5.680229 GTCAGCGCAATGAAATCTAAGATTG 59.320 40.000 11.47 0.00 0.00 2.67
136 137 5.355071 TCAGCGCAATGAAATCTAAGATTGT 59.645 36.000 11.47 0.00 0.00 2.71
137 138 5.454554 CAGCGCAATGAAATCTAAGATTGTG 59.545 40.000 11.47 0.00 38.67 3.33
138 139 5.124457 AGCGCAATGAAATCTAAGATTGTGT 59.876 36.000 11.47 0.00 38.17 3.72
139 140 5.801947 GCGCAATGAAATCTAAGATTGTGTT 59.198 36.000 0.30 0.00 38.17 3.32
140 141 6.966632 GCGCAATGAAATCTAAGATTGTGTTA 59.033 34.615 0.30 0.00 38.17 2.41
141 142 7.044706 GCGCAATGAAATCTAAGATTGTGTTAC 60.045 37.037 0.30 0.00 38.17 2.50
142 143 8.177663 CGCAATGAAATCTAAGATTGTGTTACT 58.822 33.333 0.00 0.00 33.56 2.24
143 144 9.495754 GCAATGAAATCTAAGATTGTGTTACTC 57.504 33.333 0.00 0.00 0.00 2.59
144 145 9.994432 CAATGAAATCTAAGATTGTGTTACTCC 57.006 33.333 0.00 0.00 0.00 3.85
145 146 8.738645 ATGAAATCTAAGATTGTGTTACTCCC 57.261 34.615 0.00 0.00 0.00 4.30
146 147 7.918076 TGAAATCTAAGATTGTGTTACTCCCT 58.082 34.615 0.00 0.00 0.00 4.20
147 148 8.041323 TGAAATCTAAGATTGTGTTACTCCCTC 58.959 37.037 0.00 0.00 0.00 4.30
148 149 5.934402 TCTAAGATTGTGTTACTCCCTCC 57.066 43.478 0.00 0.00 0.00 4.30
149 150 3.611766 AAGATTGTGTTACTCCCTCCG 57.388 47.619 0.00 0.00 0.00 4.63
150 151 2.816411 AGATTGTGTTACTCCCTCCGA 58.184 47.619 0.00 0.00 0.00 4.55
151 152 3.375699 AGATTGTGTTACTCCCTCCGAT 58.624 45.455 0.00 0.00 0.00 4.18
152 153 3.385111 AGATTGTGTTACTCCCTCCGATC 59.615 47.826 0.00 0.00 0.00 3.69
153 154 1.481871 TGTGTTACTCCCTCCGATCC 58.518 55.000 0.00 0.00 0.00 3.36
154 155 0.384669 GTGTTACTCCCTCCGATCCG 59.615 60.000 0.00 0.00 0.00 4.18
155 156 0.033796 TGTTACTCCCTCCGATCCGT 60.034 55.000 0.00 0.00 0.00 4.69
156 157 0.384669 GTTACTCCCTCCGATCCGTG 59.615 60.000 0.00 0.00 0.00 4.94
157 158 1.389609 TTACTCCCTCCGATCCGTGC 61.390 60.000 0.00 0.00 0.00 5.34
158 159 2.280404 TACTCCCTCCGATCCGTGCT 62.280 60.000 0.00 0.00 0.00 4.40
159 160 2.363795 TCCCTCCGATCCGTGCTT 60.364 61.111 0.00 0.00 0.00 3.91
160 161 1.076559 TCCCTCCGATCCGTGCTTA 60.077 57.895 0.00 0.00 0.00 3.09
161 162 1.107538 TCCCTCCGATCCGTGCTTAG 61.108 60.000 0.00 0.00 0.00 2.18
162 163 1.392710 CCCTCCGATCCGTGCTTAGT 61.393 60.000 0.00 0.00 0.00 2.24
163 164 0.249073 CCTCCGATCCGTGCTTAGTG 60.249 60.000 0.00 0.00 0.00 2.74
164 165 0.872021 CTCCGATCCGTGCTTAGTGC 60.872 60.000 0.00 0.00 43.25 4.40
186 187 9.893305 AGTGCAAATTTTATGTAGTAAGTCAAC 57.107 29.630 0.00 0.00 0.00 3.18
187 188 8.837059 GTGCAAATTTTATGTAGTAAGTCAACG 58.163 33.333 0.00 0.00 0.00 4.10
188 189 8.775527 TGCAAATTTTATGTAGTAAGTCAACGA 58.224 29.630 0.00 0.00 0.00 3.85
189 190 9.047871 GCAAATTTTATGTAGTAAGTCAACGAC 57.952 33.333 0.00 0.00 0.00 4.34
197 198 7.862741 TGTAGTAAGTCAACGACAATTACTG 57.137 36.000 14.35 0.00 35.67 2.74
198 199 5.840940 AGTAAGTCAACGACAATTACTGC 57.159 39.130 7.57 0.00 34.51 4.40
199 200 4.689345 AGTAAGTCAACGACAATTACTGCC 59.311 41.667 7.57 0.00 34.51 4.85
200 201 3.402628 AGTCAACGACAATTACTGCCT 57.597 42.857 0.00 0.00 34.60 4.75
201 202 3.326747 AGTCAACGACAATTACTGCCTC 58.673 45.455 0.00 0.00 34.60 4.70
202 203 3.006967 AGTCAACGACAATTACTGCCTCT 59.993 43.478 0.00 0.00 34.60 3.69
203 204 3.123621 GTCAACGACAATTACTGCCTCTG 59.876 47.826 0.00 0.00 32.09 3.35
204 205 3.067106 CAACGACAATTACTGCCTCTGT 58.933 45.455 0.00 0.00 0.00 3.41
205 206 4.021807 TCAACGACAATTACTGCCTCTGTA 60.022 41.667 0.00 0.00 0.00 2.74
206 207 4.530710 ACGACAATTACTGCCTCTGTAA 57.469 40.909 0.00 0.00 33.64 2.41
207 208 4.890088 ACGACAATTACTGCCTCTGTAAA 58.110 39.130 0.00 0.00 33.06 2.01
208 209 4.689345 ACGACAATTACTGCCTCTGTAAAC 59.311 41.667 0.00 0.00 33.06 2.01
209 210 4.688879 CGACAATTACTGCCTCTGTAAACA 59.311 41.667 0.00 0.00 33.06 2.83
210 211 5.163953 CGACAATTACTGCCTCTGTAAACAG 60.164 44.000 3.64 3.64 45.08 3.16
211 212 5.003804 ACAATTACTGCCTCTGTAAACAGG 58.996 41.667 10.11 0.00 43.91 4.00
212 213 4.910458 ATTACTGCCTCTGTAAACAGGT 57.090 40.909 10.11 2.82 43.91 4.00
217 218 3.997021 CTGCCTCTGTAAACAGGTACAAG 59.003 47.826 10.11 0.27 43.91 3.16
254 256 8.870160 TCAACTTTTTCTAATTTGGATGTGTG 57.130 30.769 0.00 0.00 0.00 3.82
280 282 3.120683 ACGCATGTCAGTGTGTTTATTCG 60.121 43.478 0.00 0.00 39.65 3.34
282 284 4.610456 CGCATGTCAGTGTGTTTATTCGTT 60.610 41.667 0.00 0.00 0.00 3.85
283 285 4.846137 GCATGTCAGTGTGTTTATTCGTTC 59.154 41.667 0.00 0.00 0.00 3.95
302 304 7.153217 TCGTTCTCATTTCAGTCTGTATGTA 57.847 36.000 13.61 5.30 0.00 2.29
305 307 7.542477 CGTTCTCATTTCAGTCTGTATGTAGTT 59.458 37.037 13.61 0.00 0.00 2.24
308 310 8.753133 TCTCATTTCAGTCTGTATGTAGTTCAT 58.247 33.333 13.61 0.00 40.25 2.57
345 347 7.279981 CCAAAACATCTCATAATAGTGAACGGA 59.720 37.037 0.00 0.00 0.00 4.69
346 348 8.331022 CAAAACATCTCATAATAGTGAACGGAG 58.669 37.037 0.00 0.00 0.00 4.63
354 356 1.742761 TAGTGAACGGAGGGAGTACG 58.257 55.000 0.00 0.00 0.00 3.67
407 449 9.067541 GTCTTGTAGACATGGAACAAGCAACTT 62.068 40.741 22.39 0.00 46.18 2.66
441 483 5.939296 GCCAATGAATTCTTGATTTTGGGAA 59.061 36.000 7.05 0.00 36.64 3.97
452 494 8.752005 TCTTGATTTTGGGAAGATCGAATTAT 57.248 30.769 0.00 0.00 0.00 1.28
471 513 7.007725 CGAATTATCATGTTTGTGAGTCTTTGC 59.992 37.037 0.00 0.00 0.00 3.68
472 514 3.988379 TCATGTTTGTGAGTCTTTGCC 57.012 42.857 0.00 0.00 0.00 4.52
473 515 3.554934 TCATGTTTGTGAGTCTTTGCCT 58.445 40.909 0.00 0.00 0.00 4.75
474 516 3.316029 TCATGTTTGTGAGTCTTTGCCTG 59.684 43.478 0.00 0.00 0.00 4.85
476 518 3.351740 TGTTTGTGAGTCTTTGCCTGAA 58.648 40.909 0.00 0.00 0.00 3.02
477 519 3.953612 TGTTTGTGAGTCTTTGCCTGAAT 59.046 39.130 0.00 0.00 0.00 2.57
478 520 4.402155 TGTTTGTGAGTCTTTGCCTGAATT 59.598 37.500 0.00 0.00 0.00 2.17
480 522 6.265196 TGTTTGTGAGTCTTTGCCTGAATTAT 59.735 34.615 0.00 0.00 0.00 1.28
481 523 6.500684 TTGTGAGTCTTTGCCTGAATTATC 57.499 37.500 0.00 0.00 0.00 1.75
482 524 5.559770 TGTGAGTCTTTGCCTGAATTATCA 58.440 37.500 0.00 0.00 0.00 2.15
483 525 6.182627 TGTGAGTCTTTGCCTGAATTATCAT 58.817 36.000 0.00 0.00 34.37 2.45
484 526 6.094464 TGTGAGTCTTTGCCTGAATTATCATG 59.906 38.462 0.00 0.00 34.37 3.07
485 527 6.094603 GTGAGTCTTTGCCTGAATTATCATGT 59.905 38.462 0.00 0.00 34.37 3.21
486 528 6.660521 TGAGTCTTTGCCTGAATTATCATGTT 59.339 34.615 0.00 0.00 34.37 2.71
487 529 7.177216 TGAGTCTTTGCCTGAATTATCATGTTT 59.823 33.333 0.00 0.00 34.37 2.83
488 530 7.318141 AGTCTTTGCCTGAATTATCATGTTTG 58.682 34.615 0.00 0.00 34.37 2.93
489 531 7.039504 AGTCTTTGCCTGAATTATCATGTTTGT 60.040 33.333 0.00 0.00 34.37 2.83
490 532 7.062605 GTCTTTGCCTGAATTATCATGTTTGTG 59.937 37.037 0.00 0.00 34.37 3.33
491 533 6.587206 TTGCCTGAATTATCATGTTTGTGA 57.413 33.333 0.00 0.00 34.37 3.58
492 534 6.198650 TGCCTGAATTATCATGTTTGTGAG 57.801 37.500 0.00 0.00 34.37 3.51
493 535 5.711506 TGCCTGAATTATCATGTTTGTGAGT 59.288 36.000 0.00 0.00 34.37 3.41
494 536 6.127925 TGCCTGAATTATCATGTTTGTGAGTC 60.128 38.462 0.00 0.00 34.37 3.36
495 537 6.094603 GCCTGAATTATCATGTTTGTGAGTCT 59.905 38.462 0.00 0.00 34.37 3.24
496 538 7.362401 GCCTGAATTATCATGTTTGTGAGTCTT 60.362 37.037 0.00 0.00 34.37 3.01
497 539 8.517878 CCTGAATTATCATGTTTGTGAGTCTTT 58.482 33.333 0.00 0.00 34.37 2.52
498 540 9.338291 CTGAATTATCATGTTTGTGAGTCTTTG 57.662 33.333 0.00 0.00 34.37 2.77
499 541 7.809331 TGAATTATCATGTTTGTGAGTCTTTGC 59.191 33.333 0.00 0.00 0.00 3.68
500 542 3.988379 TCATGTTTGTGAGTCTTTGCC 57.012 42.857 0.00 0.00 0.00 4.52
501 543 3.554934 TCATGTTTGTGAGTCTTTGCCT 58.445 40.909 0.00 0.00 0.00 4.75
502 544 3.316029 TCATGTTTGTGAGTCTTTGCCTG 59.684 43.478 0.00 0.00 0.00 4.85
503 545 2.722094 TGTTTGTGAGTCTTTGCCTGT 58.278 42.857 0.00 0.00 0.00 4.00
504 546 3.879998 TGTTTGTGAGTCTTTGCCTGTA 58.120 40.909 0.00 0.00 0.00 2.74
505 547 4.460263 TGTTTGTGAGTCTTTGCCTGTAT 58.540 39.130 0.00 0.00 0.00 2.29
506 548 5.616270 TGTTTGTGAGTCTTTGCCTGTATA 58.384 37.500 0.00 0.00 0.00 1.47
507 549 6.058833 TGTTTGTGAGTCTTTGCCTGTATAA 58.941 36.000 0.00 0.00 0.00 0.98
508 550 6.544197 TGTTTGTGAGTCTTTGCCTGTATAAA 59.456 34.615 0.00 0.00 0.00 1.40
509 551 6.801539 TTGTGAGTCTTTGCCTGTATAAAG 57.198 37.500 0.00 0.00 35.70 1.85
510 552 5.245531 TGTGAGTCTTTGCCTGTATAAAGG 58.754 41.667 4.35 4.35 40.63 3.11
511 553 5.221843 TGTGAGTCTTTGCCTGTATAAAGGT 60.222 40.000 10.81 0.00 39.75 3.50
524 583 7.042925 GCCTGTATAAAGGTTGTTGATAGTACG 60.043 40.741 10.81 0.00 39.75 3.67
528 587 9.787532 GTATAAAGGTTGTTGATAGTACGTACA 57.212 33.333 26.55 13.44 0.00 2.90
540 599 8.462589 TGATAGTACGTACACATTTACCCATA 57.537 34.615 26.55 6.89 0.00 2.74
555 614 9.037737 CATTTACCCATAATTTTGCTCTGATTG 57.962 33.333 0.00 0.00 0.00 2.67
556 615 5.014808 ACCCATAATTTTGCTCTGATTGC 57.985 39.130 0.00 0.00 0.00 3.56
566 625 5.680594 TTGCTCTGATTGCCCATAATTTT 57.319 34.783 0.00 0.00 0.00 1.82
570 629 5.738208 GCTCTGATTGCCCATAATTTTCCTG 60.738 44.000 0.00 0.00 0.00 3.86
575 634 4.799564 TGCCCATAATTTTCCTGTCAAC 57.200 40.909 0.00 0.00 0.00 3.18
583 642 7.118101 CCATAATTTTCCTGTCAACCAACAATG 59.882 37.037 0.00 0.00 0.00 2.82
584 643 5.612725 ATTTTCCTGTCAACCAACAATGT 57.387 34.783 0.00 0.00 0.00 2.71
585 644 5.413309 TTTTCCTGTCAACCAACAATGTT 57.587 34.783 0.00 0.00 0.00 2.71
586 645 6.531503 TTTTCCTGTCAACCAACAATGTTA 57.468 33.333 0.00 0.00 0.00 2.41
587 646 6.723298 TTTCCTGTCAACCAACAATGTTAT 57.277 33.333 0.00 0.00 0.00 1.89
588 647 6.723298 TTCCTGTCAACCAACAATGTTATT 57.277 33.333 0.00 0.00 0.00 1.40
589 648 6.723298 TCCTGTCAACCAACAATGTTATTT 57.277 33.333 0.00 0.00 0.00 1.40
590 649 7.825331 TCCTGTCAACCAACAATGTTATTTA 57.175 32.000 0.00 0.00 0.00 1.40
591 650 8.415950 TCCTGTCAACCAACAATGTTATTTAT 57.584 30.769 0.00 0.00 0.00 1.40
592 651 8.303156 TCCTGTCAACCAACAATGTTATTTATG 58.697 33.333 0.00 0.00 0.00 1.90
593 652 7.063308 CCTGTCAACCAACAATGTTATTTATGC 59.937 37.037 0.00 0.00 0.00 3.14
594 653 7.665690 TGTCAACCAACAATGTTATTTATGCT 58.334 30.769 0.00 0.00 0.00 3.79
595 654 8.147058 TGTCAACCAACAATGTTATTTATGCTT 58.853 29.630 0.00 0.00 0.00 3.91
596 655 8.434661 GTCAACCAACAATGTTATTTATGCTTG 58.565 33.333 0.00 0.00 0.00 4.01
597 656 7.601886 TCAACCAACAATGTTATTTATGCTTGG 59.398 33.333 0.00 0.00 33.78 3.61
598 657 7.003402 ACCAACAATGTTATTTATGCTTGGT 57.997 32.000 0.00 0.00 34.92 3.67
599 658 7.449247 ACCAACAATGTTATTTATGCTTGGTT 58.551 30.769 0.00 0.00 35.56 3.67
600 659 7.936301 ACCAACAATGTTATTTATGCTTGGTTT 59.064 29.630 0.00 0.00 35.56 3.27
601 660 8.442384 CCAACAATGTTATTTATGCTTGGTTTC 58.558 33.333 0.00 0.00 0.00 2.78
602 661 7.810766 ACAATGTTATTTATGCTTGGTTTCG 57.189 32.000 0.00 0.00 0.00 3.46
603 662 7.375053 ACAATGTTATTTATGCTTGGTTTCGT 58.625 30.769 0.00 0.00 0.00 3.85
604 663 7.870445 ACAATGTTATTTATGCTTGGTTTCGTT 59.130 29.630 0.00 0.00 0.00 3.85
605 664 8.707839 CAATGTTATTTATGCTTGGTTTCGTTT 58.292 29.630 0.00 0.00 0.00 3.60
606 665 7.861176 TGTTATTTATGCTTGGTTTCGTTTC 57.139 32.000 0.00 0.00 0.00 2.78
607 666 7.426410 TGTTATTTATGCTTGGTTTCGTTTCA 58.574 30.769 0.00 0.00 0.00 2.69
608 667 7.921214 TGTTATTTATGCTTGGTTTCGTTTCAA 59.079 29.630 0.00 0.00 0.00 2.69
609 668 8.756864 GTTATTTATGCTTGGTTTCGTTTCAAA 58.243 29.630 0.00 0.00 0.00 2.69
610 669 7.961325 ATTTATGCTTGGTTTCGTTTCAAAT 57.039 28.000 0.00 0.00 0.00 2.32
611 670 7.401484 TTTATGCTTGGTTTCGTTTCAAATC 57.599 32.000 0.00 0.00 0.00 2.17
612 671 4.647424 TGCTTGGTTTCGTTTCAAATCT 57.353 36.364 0.00 0.00 0.00 2.40
613 672 4.606961 TGCTTGGTTTCGTTTCAAATCTC 58.393 39.130 0.00 0.00 0.00 2.75
614 673 4.097135 TGCTTGGTTTCGTTTCAAATCTCA 59.903 37.500 0.00 0.00 0.00 3.27
615 674 4.676924 GCTTGGTTTCGTTTCAAATCTCAG 59.323 41.667 0.00 0.00 0.00 3.35
616 675 5.505654 GCTTGGTTTCGTTTCAAATCTCAGA 60.506 40.000 0.00 0.00 0.00 3.27
617 676 6.443934 TTGGTTTCGTTTCAAATCTCAGAA 57.556 33.333 0.00 0.00 0.00 3.02
618 677 6.443934 TGGTTTCGTTTCAAATCTCAGAAA 57.556 33.333 0.00 0.00 0.00 2.52
619 678 6.857956 TGGTTTCGTTTCAAATCTCAGAAAA 58.142 32.000 0.00 0.00 35.71 2.29
620 679 6.972328 TGGTTTCGTTTCAAATCTCAGAAAAG 59.028 34.615 0.00 0.00 35.71 2.27
621 680 6.417930 GGTTTCGTTTCAAATCTCAGAAAAGG 59.582 38.462 0.00 0.00 35.71 3.11
622 681 6.693315 TTCGTTTCAAATCTCAGAAAAGGT 57.307 33.333 0.00 0.00 35.71 3.50
623 682 7.795482 TTCGTTTCAAATCTCAGAAAAGGTA 57.205 32.000 0.00 0.00 35.71 3.08
624 683 7.186021 TCGTTTCAAATCTCAGAAAAGGTAC 57.814 36.000 0.00 0.00 35.71 3.34
625 684 6.764085 TCGTTTCAAATCTCAGAAAAGGTACA 59.236 34.615 0.00 0.00 35.71 2.90
626 685 7.281324 TCGTTTCAAATCTCAGAAAAGGTACAA 59.719 33.333 0.00 0.00 35.71 2.41
627 686 8.076178 CGTTTCAAATCTCAGAAAAGGTACAAT 58.924 33.333 0.00 0.00 35.71 2.71
628 687 9.750125 GTTTCAAATCTCAGAAAAGGTACAATT 57.250 29.630 0.00 0.00 35.71 2.32
630 689 9.748708 TTCAAATCTCAGAAAAGGTACAATTTG 57.251 29.630 0.00 0.00 34.50 2.32
631 690 9.130661 TCAAATCTCAGAAAAGGTACAATTTGA 57.869 29.630 2.79 0.00 37.92 2.69
639 698 7.857885 CAGAAAAGGTACAATTTGAGTCAGTTC 59.142 37.037 2.79 0.94 0.00 3.01
671 730 1.000607 ACAAGCAGCACAGAATTGCAG 60.001 47.619 0.00 0.00 45.62 4.41
679 738 3.499918 AGCACAGAATTGCAGAACTACAC 59.500 43.478 0.00 0.00 45.62 2.90
680 739 3.250762 GCACAGAATTGCAGAACTACACA 59.749 43.478 0.00 0.00 42.49 3.72
681 740 4.261155 GCACAGAATTGCAGAACTACACAA 60.261 41.667 0.00 0.00 42.49 3.33
700 759 0.773644 AGTTGCCATCTTCACCCAGT 59.226 50.000 0.00 0.00 0.00 4.00
701 760 1.985159 AGTTGCCATCTTCACCCAGTA 59.015 47.619 0.00 0.00 0.00 2.74
704 763 1.004277 TGCCATCTTCACCCAGTAACC 59.996 52.381 0.00 0.00 0.00 2.85
705 764 1.004277 GCCATCTTCACCCAGTAACCA 59.996 52.381 0.00 0.00 0.00 3.67
706 765 2.554344 GCCATCTTCACCCAGTAACCAA 60.554 50.000 0.00 0.00 0.00 3.67
707 766 3.877735 GCCATCTTCACCCAGTAACCAAT 60.878 47.826 0.00 0.00 0.00 3.16
708 767 3.696051 CCATCTTCACCCAGTAACCAATG 59.304 47.826 0.00 0.00 0.00 2.82
709 768 4.567537 CCATCTTCACCCAGTAACCAATGA 60.568 45.833 0.00 0.00 0.00 2.57
710 769 4.715534 TCTTCACCCAGTAACCAATGAA 57.284 40.909 0.00 0.00 0.00 2.57
711 770 4.394729 TCTTCACCCAGTAACCAATGAAC 58.605 43.478 0.00 0.00 0.00 3.18
712 771 4.104102 TCTTCACCCAGTAACCAATGAACT 59.896 41.667 0.00 0.00 0.00 3.01
713 772 5.308497 TCTTCACCCAGTAACCAATGAACTA 59.692 40.000 0.00 0.00 0.00 2.24
714 773 5.772393 TCACCCAGTAACCAATGAACTAT 57.228 39.130 0.00 0.00 0.00 2.12
715 774 6.134535 TCACCCAGTAACCAATGAACTATT 57.865 37.500 0.00 0.00 0.00 1.73
716 775 7.260387 TCACCCAGTAACCAATGAACTATTA 57.740 36.000 0.00 0.00 0.00 0.98
717 776 7.867921 TCACCCAGTAACCAATGAACTATTAT 58.132 34.615 0.00 0.00 0.00 1.28
718 777 8.333235 TCACCCAGTAACCAATGAACTATTATT 58.667 33.333 0.00 0.00 0.00 1.40
719 778 8.621286 CACCCAGTAACCAATGAACTATTATTC 58.379 37.037 0.00 0.00 0.00 1.75
720 779 7.778382 ACCCAGTAACCAATGAACTATTATTCC 59.222 37.037 0.00 0.00 0.00 3.01
721 780 7.041372 CCCAGTAACCAATGAACTATTATTCCG 60.041 40.741 0.00 0.00 0.00 4.30
722 781 7.352739 CAGTAACCAATGAACTATTATTCCGC 58.647 38.462 0.00 0.00 0.00 5.54
723 782 7.011950 CAGTAACCAATGAACTATTATTCCGCA 59.988 37.037 0.00 0.00 0.00 5.69
724 783 6.767524 AACCAATGAACTATTATTCCGCAA 57.232 33.333 0.00 0.00 0.00 4.85
725 784 6.767524 ACCAATGAACTATTATTCCGCAAA 57.232 33.333 0.00 0.00 0.00 3.68
726 785 7.164230 ACCAATGAACTATTATTCCGCAAAA 57.836 32.000 0.00 0.00 0.00 2.44
727 786 7.607250 ACCAATGAACTATTATTCCGCAAAAA 58.393 30.769 0.00 0.00 0.00 1.94
753 812 5.744666 AAATGCAATGAATTATTGGCAGC 57.255 34.783 0.00 0.00 45.09 5.25
772 831 2.013563 GCTTTGATGCATCCGAGGACA 61.014 52.381 23.67 0.71 0.00 4.02
775 834 1.737838 TGATGCATCCGAGGACAAAC 58.262 50.000 23.67 0.00 0.00 2.93
776 835 1.003003 TGATGCATCCGAGGACAAACA 59.997 47.619 23.67 0.00 0.00 2.83
777 836 2.292267 GATGCATCCGAGGACAAACAT 58.708 47.619 16.23 0.00 0.00 2.71
778 837 1.737838 TGCATCCGAGGACAAACATC 58.262 50.000 0.00 0.00 0.00 3.06
779 838 1.003003 TGCATCCGAGGACAAACATCA 59.997 47.619 0.00 0.00 0.00 3.07
780 839 1.398390 GCATCCGAGGACAAACATCAC 59.602 52.381 0.00 0.00 0.00 3.06
781 840 2.009774 CATCCGAGGACAAACATCACC 58.990 52.381 0.00 0.00 0.00 4.02
782 841 1.052617 TCCGAGGACAAACATCACCA 58.947 50.000 0.00 0.00 0.00 4.17
783 842 1.628340 TCCGAGGACAAACATCACCAT 59.372 47.619 0.00 0.00 0.00 3.55
784 843 2.835156 TCCGAGGACAAACATCACCATA 59.165 45.455 0.00 0.00 0.00 2.74
794 853 5.125417 ACAAACATCACCATATTACCTGTGC 59.875 40.000 0.00 0.00 0.00 4.57
804 863 0.250295 TTACCTGTGCTGTGCTGGTC 60.250 55.000 0.00 0.00 32.36 4.02
823 882 4.158394 TGGTCTTAATCTTGCCAGCAAATC 59.842 41.667 6.52 0.00 35.33 2.17
825 884 4.094887 GTCTTAATCTTGCCAGCAAATCGA 59.905 41.667 6.52 1.06 35.33 3.59
828 887 0.874390 TCTTGCCAGCAAATCGACAC 59.126 50.000 6.52 0.00 35.33 3.67
844 903 3.443681 TCGACACTCTCTATGCATCACAA 59.556 43.478 0.19 0.00 0.00 3.33
845 904 3.795639 CGACACTCTCTATGCATCACAAG 59.204 47.826 0.19 0.00 0.00 3.16
847 906 3.118482 ACACTCTCTATGCATCACAAGGG 60.118 47.826 0.19 0.78 0.00 3.95
851 939 3.519107 TCTCTATGCATCACAAGGGACAA 59.481 43.478 0.19 0.00 0.00 3.18
858 947 3.612479 GCATCACAAGGGACAAACATCAC 60.612 47.826 0.00 0.00 0.00 3.06
882 971 3.670105 TGGTTCCTCCAATTCCTGC 57.330 52.632 0.00 0.00 44.12 4.85
886 975 0.332632 TTCCTCCAATTCCTGCCCAG 59.667 55.000 0.00 0.00 0.00 4.45
887 976 0.549902 TCCTCCAATTCCTGCCCAGA 60.550 55.000 0.00 0.00 0.00 3.86
893 982 2.613725 CCAATTCCTGCCCAGAAAAAGC 60.614 50.000 0.00 0.00 0.00 3.51
897 986 1.412343 TCCTGCCCAGAAAAAGCAAAC 59.588 47.619 0.00 0.00 35.79 2.93
899 988 0.103937 TGCCCAGAAAAAGCAAACCG 59.896 50.000 0.00 0.00 32.56 4.44
902 991 1.602920 CCCAGAAAAAGCAAACCGAGC 60.603 52.381 0.00 0.00 0.00 5.03
903 992 1.338020 CCAGAAAAAGCAAACCGAGCT 59.662 47.619 0.00 0.00 45.97 4.09
904 993 2.388121 CAGAAAAAGCAAACCGAGCTG 58.612 47.619 0.00 0.00 42.53 4.24
905 994 1.131771 GAAAAAGCAAACCGAGCTGC 58.868 50.000 0.00 0.00 42.53 5.25
908 997 1.109323 AAAGCAAACCGAGCTGCCTT 61.109 50.000 0.00 0.00 42.53 4.35
962 1051 2.784356 GCCACAAGCACCAGCAACA 61.784 57.895 0.00 0.00 45.49 3.33
963 1052 1.361271 CCACAAGCACCAGCAACAG 59.639 57.895 0.00 0.00 45.49 3.16
964 1053 1.102809 CCACAAGCACCAGCAACAGA 61.103 55.000 0.00 0.00 45.49 3.41
965 1054 0.029834 CACAAGCACCAGCAACAGAC 59.970 55.000 0.00 0.00 45.49 3.51
1041 1133 4.947147 TTGGCGCTGGTGGTGGTC 62.947 66.667 7.64 0.00 0.00 4.02
1712 1847 7.380602 TGTTTTTGAATTTGTTTTGCTTGTTGG 59.619 29.630 0.00 0.00 0.00 3.77
1732 1869 0.605589 AAACCTACCTGCCGAGCAAC 60.606 55.000 0.35 0.00 38.41 4.17
1768 1905 0.911053 TGCATGCACATGGTAGGAGA 59.089 50.000 18.46 0.00 39.16 3.71
1769 1906 1.491754 TGCATGCACATGGTAGGAGAT 59.508 47.619 18.46 0.00 39.16 2.75
1793 1930 5.604758 TTTGGTGGTGAAATGATGTTGAA 57.395 34.783 0.00 0.00 0.00 2.69
1801 1938 7.276218 GTGGTGAAATGATGTTGAATTATGTGG 59.724 37.037 0.00 0.00 0.00 4.17
1833 1970 3.927142 GTCGTCTTGATTTGGATCGAACT 59.073 43.478 0.00 0.00 34.91 3.01
1959 2100 1.670811 GAAGGCACCGATGTTGTATGG 59.329 52.381 0.00 0.00 0.00 2.74
2130 2285 3.735237 CTTGGCGATTAGAGCTAAGGA 57.265 47.619 6.43 0.00 45.48 3.36
2241 2410 9.770097 TTCTATCCATTTCAAGATTGTAGCTAG 57.230 33.333 0.00 0.00 0.00 3.42
2360 2530 9.944376 TCCATAGTGTTATTTAGAATGATAGGC 57.056 33.333 0.00 0.00 0.00 3.93
2403 2573 3.704061 AGAAGATAGAGAGGGACACTTGC 59.296 47.826 0.00 0.00 0.00 4.01
2404 2574 3.396685 AGATAGAGAGGGACACTTGCT 57.603 47.619 0.00 0.00 0.00 3.91
2412 2582 5.248477 AGAGAGGGACACTTGCTTTATGTTA 59.752 40.000 0.00 0.00 0.00 2.41
2417 4116 5.648092 GGGACACTTGCTTTATGTTATGACT 59.352 40.000 0.00 0.00 0.00 3.41
2508 4949 5.207768 CAAGAGTTGCATAACAGACACAAC 58.792 41.667 0.00 0.00 40.65 3.32
2581 5022 5.048782 TGAGTCACCATAACAATTCACAAGC 60.049 40.000 0.00 0.00 0.00 4.01
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 8.797438 CCACATATTGATAGTGTAGCTTCTCTA 58.203 37.037 4.85 4.85 0.00 2.43
1 2 7.507277 TCCACATATTGATAGTGTAGCTTCTCT 59.493 37.037 0.00 0.00 0.00 3.10
2 3 7.661968 TCCACATATTGATAGTGTAGCTTCTC 58.338 38.462 0.00 0.00 0.00 2.87
3 4 7.507277 TCTCCACATATTGATAGTGTAGCTTCT 59.493 37.037 0.00 0.00 0.00 2.85
4 5 7.661968 TCTCCACATATTGATAGTGTAGCTTC 58.338 38.462 0.00 0.00 0.00 3.86
5 6 7.603180 TCTCCACATATTGATAGTGTAGCTT 57.397 36.000 0.00 0.00 0.00 3.74
6 7 7.789202 ATCTCCACATATTGATAGTGTAGCT 57.211 36.000 0.00 0.00 0.00 3.32
7 8 8.839310 AAATCTCCACATATTGATAGTGTAGC 57.161 34.615 0.00 0.00 0.00 3.58
9 10 9.559732 CCAAAATCTCCACATATTGATAGTGTA 57.440 33.333 0.00 0.00 0.00 2.90
10 11 8.055181 ACCAAAATCTCCACATATTGATAGTGT 58.945 33.333 0.00 0.00 0.00 3.55
11 12 8.455903 ACCAAAATCTCCACATATTGATAGTG 57.544 34.615 0.00 0.00 0.00 2.74
12 13 9.561069 GTACCAAAATCTCCACATATTGATAGT 57.439 33.333 0.00 0.00 0.00 2.12
13 14 9.559732 TGTACCAAAATCTCCACATATTGATAG 57.440 33.333 0.00 0.00 0.00 2.08
15 16 9.425248 AATGTACCAAAATCTCCACATATTGAT 57.575 29.630 0.00 0.00 0.00 2.57
16 17 8.685427 CAATGTACCAAAATCTCCACATATTGA 58.315 33.333 0.00 0.00 0.00 2.57
17 18 8.469200 ACAATGTACCAAAATCTCCACATATTG 58.531 33.333 0.00 0.00 0.00 1.90
18 19 8.593945 ACAATGTACCAAAATCTCCACATATT 57.406 30.769 0.00 0.00 0.00 1.28
19 20 9.693739 TTACAATGTACCAAAATCTCCACATAT 57.306 29.630 0.00 0.00 0.00 1.78
20 21 9.173021 CTTACAATGTACCAAAATCTCCACATA 57.827 33.333 0.00 0.00 0.00 2.29
21 22 7.888021 TCTTACAATGTACCAAAATCTCCACAT 59.112 33.333 0.00 0.00 0.00 3.21
22 23 7.227873 TCTTACAATGTACCAAAATCTCCACA 58.772 34.615 0.00 0.00 0.00 4.17
23 24 7.681939 TCTTACAATGTACCAAAATCTCCAC 57.318 36.000 0.00 0.00 0.00 4.02
24 25 8.739039 CAATCTTACAATGTACCAAAATCTCCA 58.261 33.333 0.00 0.00 0.00 3.86
25 26 8.190784 CCAATCTTACAATGTACCAAAATCTCC 58.809 37.037 0.00 0.00 0.00 3.71
26 27 8.956426 TCCAATCTTACAATGTACCAAAATCTC 58.044 33.333 0.00 0.00 0.00 2.75
27 28 8.739972 GTCCAATCTTACAATGTACCAAAATCT 58.260 33.333 0.00 0.00 0.00 2.40
28 29 8.739972 AGTCCAATCTTACAATGTACCAAAATC 58.260 33.333 0.00 0.00 0.00 2.17
29 30 8.650143 AGTCCAATCTTACAATGTACCAAAAT 57.350 30.769 0.00 0.00 0.00 1.82
30 31 9.226606 CTAGTCCAATCTTACAATGTACCAAAA 57.773 33.333 0.00 0.00 0.00 2.44
31 32 8.380099 ACTAGTCCAATCTTACAATGTACCAAA 58.620 33.333 0.00 0.00 0.00 3.28
32 33 7.822334 CACTAGTCCAATCTTACAATGTACCAA 59.178 37.037 0.00 0.00 0.00 3.67
33 34 7.327975 CACTAGTCCAATCTTACAATGTACCA 58.672 38.462 0.00 0.00 0.00 3.25
34 35 6.258068 GCACTAGTCCAATCTTACAATGTACC 59.742 42.308 0.00 0.00 0.00 3.34
35 36 6.258068 GGCACTAGTCCAATCTTACAATGTAC 59.742 42.308 0.00 0.00 0.00 2.90
36 37 6.070481 TGGCACTAGTCCAATCTTACAATGTA 60.070 38.462 10.51 0.00 0.00 2.29
37 38 5.186198 GGCACTAGTCCAATCTTACAATGT 58.814 41.667 0.00 0.00 0.00 2.71
38 39 5.065218 GTGGCACTAGTCCAATCTTACAATG 59.935 44.000 11.13 0.00 35.01 2.82
39 40 5.186198 GTGGCACTAGTCCAATCTTACAAT 58.814 41.667 11.13 0.00 35.01 2.71
40 41 4.041075 TGTGGCACTAGTCCAATCTTACAA 59.959 41.667 19.83 0.00 35.01 2.41
41 42 3.580895 TGTGGCACTAGTCCAATCTTACA 59.419 43.478 19.83 6.04 35.01 2.41
42 43 4.202245 TGTGGCACTAGTCCAATCTTAC 57.798 45.455 19.83 4.05 35.01 2.34
43 44 4.286032 ACTTGTGGCACTAGTCCAATCTTA 59.714 41.667 25.50 0.00 35.01 2.10
44 45 3.073062 ACTTGTGGCACTAGTCCAATCTT 59.927 43.478 25.50 4.10 35.01 2.40
45 46 2.639839 ACTTGTGGCACTAGTCCAATCT 59.360 45.455 25.50 4.79 35.01 2.40
46 47 3.059352 ACTTGTGGCACTAGTCCAATC 57.941 47.619 25.50 5.68 35.01 2.67
47 48 4.019321 ACATACTTGTGGCACTAGTCCAAT 60.019 41.667 32.27 20.28 35.83 3.16
48 49 3.326588 ACATACTTGTGGCACTAGTCCAA 59.673 43.478 32.27 19.07 35.83 3.53
49 50 2.903784 ACATACTTGTGGCACTAGTCCA 59.096 45.455 32.27 19.72 35.83 4.02
50 51 3.611766 ACATACTTGTGGCACTAGTCC 57.388 47.619 32.27 0.47 35.83 3.85
51 52 4.566004 TCAACATACTTGTGGCACTAGTC 58.434 43.478 32.27 1.26 35.83 2.59
52 53 4.617253 TCAACATACTTGTGGCACTAGT 57.383 40.909 31.32 31.32 37.84 2.57
53 54 6.317088 CAATTCAACATACTTGTGGCACTAG 58.683 40.000 24.23 24.23 35.83 2.57
54 55 5.335583 GCAATTCAACATACTTGTGGCACTA 60.336 40.000 19.83 10.67 35.83 2.74
55 56 4.559300 GCAATTCAACATACTTGTGGCACT 60.559 41.667 19.83 0.54 35.83 4.40
56 57 3.674753 GCAATTCAACATACTTGTGGCAC 59.325 43.478 11.55 11.55 35.83 5.01
57 58 3.573538 AGCAATTCAACATACTTGTGGCA 59.426 39.130 0.00 0.00 35.83 4.92
58 59 4.178545 AGCAATTCAACATACTTGTGGC 57.821 40.909 0.00 0.00 35.83 5.01
59 60 6.215121 TCAAAGCAATTCAACATACTTGTGG 58.785 36.000 0.00 0.00 35.83 4.17
60 61 6.919662 ACTCAAAGCAATTCAACATACTTGTG 59.080 34.615 0.00 0.00 35.83 3.33
61 62 7.042797 ACTCAAAGCAATTCAACATACTTGT 57.957 32.000 0.00 0.00 37.82 3.16
62 63 7.935338 AACTCAAAGCAATTCAACATACTTG 57.065 32.000 0.00 0.00 0.00 3.16
63 64 8.947055 AAAACTCAAAGCAATTCAACATACTT 57.053 26.923 0.00 0.00 0.00 2.24
64 65 8.819974 CAAAAACTCAAAGCAATTCAACATACT 58.180 29.630 0.00 0.00 0.00 2.12
65 66 8.063630 CCAAAAACTCAAAGCAATTCAACATAC 58.936 33.333 0.00 0.00 0.00 2.39
66 67 7.768120 ACCAAAAACTCAAAGCAATTCAACATA 59.232 29.630 0.00 0.00 0.00 2.29
67 68 6.598850 ACCAAAAACTCAAAGCAATTCAACAT 59.401 30.769 0.00 0.00 0.00 2.71
68 69 5.936956 ACCAAAAACTCAAAGCAATTCAACA 59.063 32.000 0.00 0.00 0.00 3.33
69 70 6.421377 ACCAAAAACTCAAAGCAATTCAAC 57.579 33.333 0.00 0.00 0.00 3.18
70 71 7.099764 TGTACCAAAAACTCAAAGCAATTCAA 58.900 30.769 0.00 0.00 0.00 2.69
71 72 6.634805 TGTACCAAAAACTCAAAGCAATTCA 58.365 32.000 0.00 0.00 0.00 2.57
72 73 6.756542 ACTGTACCAAAAACTCAAAGCAATTC 59.243 34.615 0.00 0.00 0.00 2.17
73 74 6.639563 ACTGTACCAAAAACTCAAAGCAATT 58.360 32.000 0.00 0.00 0.00 2.32
74 75 6.096846 AGACTGTACCAAAAACTCAAAGCAAT 59.903 34.615 0.00 0.00 0.00 3.56
75 76 5.417580 AGACTGTACCAAAAACTCAAAGCAA 59.582 36.000 0.00 0.00 0.00 3.91
76 77 4.947388 AGACTGTACCAAAAACTCAAAGCA 59.053 37.500 0.00 0.00 0.00 3.91
77 78 5.500645 AGACTGTACCAAAAACTCAAAGC 57.499 39.130 0.00 0.00 0.00 3.51
78 79 8.433421 TCTTAGACTGTACCAAAAACTCAAAG 57.567 34.615 0.00 0.00 0.00 2.77
79 80 8.974060 ATCTTAGACTGTACCAAAAACTCAAA 57.026 30.769 0.00 0.00 0.00 2.69
80 81 8.974060 AATCTTAGACTGTACCAAAAACTCAA 57.026 30.769 0.00 0.00 0.00 3.02
81 82 8.974060 AAATCTTAGACTGTACCAAAAACTCA 57.026 30.769 0.00 0.00 0.00 3.41
82 83 9.880064 GAAAATCTTAGACTGTACCAAAAACTC 57.120 33.333 0.00 0.00 0.00 3.01
83 84 9.628500 AGAAAATCTTAGACTGTACCAAAAACT 57.372 29.630 0.00 0.00 0.00 2.66
86 87 9.403583 ACAAGAAAATCTTAGACTGTACCAAAA 57.596 29.630 0.00 0.00 33.78 2.44
87 88 8.974060 ACAAGAAAATCTTAGACTGTACCAAA 57.026 30.769 0.00 0.00 33.78 3.28
88 89 8.208224 TGACAAGAAAATCTTAGACTGTACCAA 58.792 33.333 0.00 0.00 33.78 3.67
89 90 7.732025 TGACAAGAAAATCTTAGACTGTACCA 58.268 34.615 0.00 0.00 33.78 3.25
90 91 7.148557 GCTGACAAGAAAATCTTAGACTGTACC 60.149 40.741 0.00 0.00 33.78 3.34
91 92 7.410942 CGCTGACAAGAAAATCTTAGACTGTAC 60.411 40.741 0.00 0.00 33.78 2.90
92 93 6.586463 CGCTGACAAGAAAATCTTAGACTGTA 59.414 38.462 0.00 0.00 33.78 2.74
93 94 5.406780 CGCTGACAAGAAAATCTTAGACTGT 59.593 40.000 0.00 0.00 33.78 3.55
94 95 5.669848 GCGCTGACAAGAAAATCTTAGACTG 60.670 44.000 0.00 0.00 33.78 3.51
95 96 4.390297 GCGCTGACAAGAAAATCTTAGACT 59.610 41.667 0.00 0.00 33.78 3.24
96 97 4.152402 TGCGCTGACAAGAAAATCTTAGAC 59.848 41.667 9.73 0.00 33.78 2.59
97 98 4.314961 TGCGCTGACAAGAAAATCTTAGA 58.685 39.130 9.73 0.00 33.78 2.10
98 99 4.668576 TGCGCTGACAAGAAAATCTTAG 57.331 40.909 9.73 0.00 33.78 2.18
99 100 5.181056 TCATTGCGCTGACAAGAAAATCTTA 59.819 36.000 9.73 0.00 33.78 2.10
100 101 3.988379 TTGCGCTGACAAGAAAATCTT 57.012 38.095 9.73 0.00 37.14 2.40
101 102 3.503363 TCATTGCGCTGACAAGAAAATCT 59.497 39.130 9.73 0.00 31.96 2.40
102 103 3.825308 TCATTGCGCTGACAAGAAAATC 58.175 40.909 9.73 0.00 31.96 2.17
103 104 3.921119 TCATTGCGCTGACAAGAAAAT 57.079 38.095 9.73 0.00 31.96 1.82
104 105 3.706802 TTCATTGCGCTGACAAGAAAA 57.293 38.095 9.73 0.00 31.96 2.29
105 106 3.706802 TTTCATTGCGCTGACAAGAAA 57.293 38.095 9.73 7.83 31.96 2.52
106 107 3.503363 AGATTTCATTGCGCTGACAAGAA 59.497 39.130 9.73 1.54 31.96 2.52
107 108 3.076621 AGATTTCATTGCGCTGACAAGA 58.923 40.909 9.73 0.00 31.96 3.02
108 109 3.482722 AGATTTCATTGCGCTGACAAG 57.517 42.857 9.73 0.00 31.96 3.16
109 110 4.694982 TCTTAGATTTCATTGCGCTGACAA 59.305 37.500 9.73 3.15 0.00 3.18
110 111 4.252878 TCTTAGATTTCATTGCGCTGACA 58.747 39.130 9.73 0.00 0.00 3.58
111 112 4.864916 TCTTAGATTTCATTGCGCTGAC 57.135 40.909 9.73 0.00 0.00 3.51
112 113 5.355071 ACAATCTTAGATTTCATTGCGCTGA 59.645 36.000 9.73 1.04 30.63 4.26
113 114 5.454554 CACAATCTTAGATTTCATTGCGCTG 59.545 40.000 9.73 0.00 30.63 5.18
114 115 5.124457 ACACAATCTTAGATTTCATTGCGCT 59.876 36.000 9.73 0.00 30.63 5.92
115 116 5.335127 ACACAATCTTAGATTTCATTGCGC 58.665 37.500 4.51 0.00 30.63 6.09
116 117 8.177663 AGTAACACAATCTTAGATTTCATTGCG 58.822 33.333 4.51 0.00 30.63 4.85
117 118 9.495754 GAGTAACACAATCTTAGATTTCATTGC 57.504 33.333 4.51 3.84 30.63 3.56
118 119 9.994432 GGAGTAACACAATCTTAGATTTCATTG 57.006 33.333 4.51 3.45 33.27 2.82
119 120 9.178758 GGGAGTAACACAATCTTAGATTTCATT 57.821 33.333 4.51 2.75 0.00 2.57
120 121 8.552296 AGGGAGTAACACAATCTTAGATTTCAT 58.448 33.333 4.51 0.00 0.00 2.57
121 122 7.918076 AGGGAGTAACACAATCTTAGATTTCA 58.082 34.615 4.51 0.00 0.00 2.69
122 123 7.496263 GGAGGGAGTAACACAATCTTAGATTTC 59.504 40.741 4.51 0.00 0.00 2.17
123 124 7.339482 GGAGGGAGTAACACAATCTTAGATTT 58.661 38.462 4.51 0.00 0.00 2.17
124 125 6.407074 CGGAGGGAGTAACACAATCTTAGATT 60.407 42.308 0.99 0.99 0.00 2.40
125 126 5.069251 CGGAGGGAGTAACACAATCTTAGAT 59.931 44.000 0.00 0.00 0.00 1.98
126 127 4.401519 CGGAGGGAGTAACACAATCTTAGA 59.598 45.833 0.00 0.00 0.00 2.10
127 128 4.401519 TCGGAGGGAGTAACACAATCTTAG 59.598 45.833 0.00 0.00 0.00 2.18
128 129 4.346730 TCGGAGGGAGTAACACAATCTTA 58.653 43.478 0.00 0.00 0.00 2.10
129 130 3.170717 TCGGAGGGAGTAACACAATCTT 58.829 45.455 0.00 0.00 0.00 2.40
130 131 2.816411 TCGGAGGGAGTAACACAATCT 58.184 47.619 0.00 0.00 0.00 2.40
131 132 3.492829 GGATCGGAGGGAGTAACACAATC 60.493 52.174 0.00 0.00 0.00 2.67
132 133 2.434702 GGATCGGAGGGAGTAACACAAT 59.565 50.000 0.00 0.00 0.00 2.71
133 134 1.829222 GGATCGGAGGGAGTAACACAA 59.171 52.381 0.00 0.00 0.00 3.33
134 135 1.481871 GGATCGGAGGGAGTAACACA 58.518 55.000 0.00 0.00 0.00 3.72
135 136 0.384669 CGGATCGGAGGGAGTAACAC 59.615 60.000 0.00 0.00 0.00 3.32
136 137 0.033796 ACGGATCGGAGGGAGTAACA 60.034 55.000 7.35 0.00 0.00 2.41
137 138 0.384669 CACGGATCGGAGGGAGTAAC 59.615 60.000 7.35 0.00 0.00 2.50
138 139 1.389609 GCACGGATCGGAGGGAGTAA 61.390 60.000 7.35 0.00 0.00 2.24
139 140 1.826921 GCACGGATCGGAGGGAGTA 60.827 63.158 7.35 0.00 0.00 2.59
140 141 3.148279 GCACGGATCGGAGGGAGT 61.148 66.667 7.35 0.00 0.00 3.85
141 142 1.107538 TAAGCACGGATCGGAGGGAG 61.108 60.000 7.35 0.00 0.00 4.30
142 143 1.076559 TAAGCACGGATCGGAGGGA 60.077 57.895 7.35 0.00 0.00 4.20
143 144 1.364171 CTAAGCACGGATCGGAGGG 59.636 63.158 7.35 0.00 0.00 4.30
144 145 0.249073 CACTAAGCACGGATCGGAGG 60.249 60.000 7.35 0.19 0.00 4.30
145 146 0.872021 GCACTAAGCACGGATCGGAG 60.872 60.000 7.35 0.00 44.79 4.63
146 147 1.141019 GCACTAAGCACGGATCGGA 59.859 57.895 7.35 0.00 44.79 4.55
147 148 3.706140 GCACTAAGCACGGATCGG 58.294 61.111 0.00 0.00 44.79 4.18
160 161 9.893305 GTTGACTTACTACATAAAATTTGCACT 57.107 29.630 0.00 0.00 0.00 4.40
161 162 8.837059 CGTTGACTTACTACATAAAATTTGCAC 58.163 33.333 0.00 0.00 0.00 4.57
162 163 8.775527 TCGTTGACTTACTACATAAAATTTGCA 58.224 29.630 0.00 0.00 0.00 4.08
163 164 9.047871 GTCGTTGACTTACTACATAAAATTTGC 57.952 33.333 0.00 0.00 0.00 3.68
171 172 9.563898 CAGTAATTGTCGTTGACTTACTACATA 57.436 33.333 9.77 0.00 33.96 2.29
172 173 7.063074 GCAGTAATTGTCGTTGACTTACTACAT 59.937 37.037 9.77 0.00 33.96 2.29
173 174 6.364165 GCAGTAATTGTCGTTGACTTACTACA 59.636 38.462 9.77 0.00 33.96 2.74
174 175 6.183360 GGCAGTAATTGTCGTTGACTTACTAC 60.183 42.308 9.77 6.23 33.96 2.73
175 176 5.865552 GGCAGTAATTGTCGTTGACTTACTA 59.134 40.000 9.77 0.00 33.96 1.82
176 177 4.689345 GGCAGTAATTGTCGTTGACTTACT 59.311 41.667 6.04 6.04 35.43 2.24
177 178 4.689345 AGGCAGTAATTGTCGTTGACTTAC 59.311 41.667 0.00 0.75 36.21 2.34
178 179 4.890088 AGGCAGTAATTGTCGTTGACTTA 58.110 39.130 0.00 0.00 36.21 2.24
179 180 3.740115 AGGCAGTAATTGTCGTTGACTT 58.260 40.909 0.00 0.00 36.21 3.01
180 181 3.006967 AGAGGCAGTAATTGTCGTTGACT 59.993 43.478 0.00 0.00 36.21 3.41
181 182 3.123621 CAGAGGCAGTAATTGTCGTTGAC 59.876 47.826 0.00 0.00 36.21 3.18
182 183 3.244078 ACAGAGGCAGTAATTGTCGTTGA 60.244 43.478 0.00 0.00 36.21 3.18
183 184 3.067106 ACAGAGGCAGTAATTGTCGTTG 58.933 45.455 0.00 0.00 36.21 4.10
184 185 3.402628 ACAGAGGCAGTAATTGTCGTT 57.597 42.857 0.00 0.00 36.21 3.85
185 186 4.530710 TTACAGAGGCAGTAATTGTCGT 57.469 40.909 0.00 0.00 36.21 4.34
186 187 4.688879 TGTTTACAGAGGCAGTAATTGTCG 59.311 41.667 0.00 0.00 36.21 4.35
187 188 5.122396 CCTGTTTACAGAGGCAGTAATTGTC 59.878 44.000 11.35 0.00 46.59 3.18
188 189 5.003804 CCTGTTTACAGAGGCAGTAATTGT 58.996 41.667 11.35 0.00 46.59 2.71
189 190 5.003804 ACCTGTTTACAGAGGCAGTAATTG 58.996 41.667 11.35 0.00 46.59 2.32
190 191 5.242795 ACCTGTTTACAGAGGCAGTAATT 57.757 39.130 11.35 0.00 46.59 1.40
191 192 4.910458 ACCTGTTTACAGAGGCAGTAAT 57.090 40.909 11.35 0.00 46.59 1.89
192 193 4.589798 TGTACCTGTTTACAGAGGCAGTAA 59.410 41.667 11.35 0.00 46.59 2.24
193 194 4.154176 TGTACCTGTTTACAGAGGCAGTA 58.846 43.478 11.35 2.34 46.59 2.74
194 195 2.969950 TGTACCTGTTTACAGAGGCAGT 59.030 45.455 11.35 3.23 46.59 4.40
195 196 3.678056 TGTACCTGTTTACAGAGGCAG 57.322 47.619 11.35 0.00 46.59 4.85
196 197 3.389983 ACTTGTACCTGTTTACAGAGGCA 59.610 43.478 11.35 4.28 46.59 4.75
197 198 4.004196 ACTTGTACCTGTTTACAGAGGC 57.996 45.455 11.35 1.95 46.59 4.70
198 199 8.746530 TCTTATACTTGTACCTGTTTACAGAGG 58.253 37.037 11.35 0.00 46.59 3.69
201 202 9.871238 ACATCTTATACTTGTACCTGTTTACAG 57.129 33.333 2.86 2.86 43.40 2.74
205 206 9.787435 TGAAACATCTTATACTTGTACCTGTTT 57.213 29.630 0.00 0.00 37.10 2.83
206 207 9.787435 TTGAAACATCTTATACTTGTACCTGTT 57.213 29.630 0.00 0.00 0.00 3.16
207 208 9.216117 GTTGAAACATCTTATACTTGTACCTGT 57.784 33.333 0.00 0.00 0.00 4.00
208 209 9.436957 AGTTGAAACATCTTATACTTGTACCTG 57.563 33.333 0.00 0.00 0.00 4.00
239 240 4.629634 TGCGTCTACACACATCCAAATTAG 59.370 41.667 0.00 0.00 0.00 1.73
240 241 4.570930 TGCGTCTACACACATCCAAATTA 58.429 39.130 0.00 0.00 0.00 1.40
241 242 3.407698 TGCGTCTACACACATCCAAATT 58.592 40.909 0.00 0.00 0.00 1.82
245 247 1.275010 ACATGCGTCTACACACATCCA 59.725 47.619 0.00 0.00 0.00 3.41
252 254 1.721389 CACACTGACATGCGTCTACAC 59.279 52.381 0.00 0.00 43.06 2.90
254 256 2.065993 ACACACTGACATGCGTCTAC 57.934 50.000 0.00 0.00 43.06 2.59
264 266 5.900339 TGAGAACGAATAAACACACTGAC 57.100 39.130 0.00 0.00 0.00 3.51
266 268 7.351981 TGAAATGAGAACGAATAAACACACTG 58.648 34.615 0.00 0.00 0.00 3.66
280 282 8.764524 AACTACATACAGACTGAAATGAGAAC 57.235 34.615 21.47 0.00 0.00 3.01
282 284 8.122472 TGAACTACATACAGACTGAAATGAGA 57.878 34.615 21.47 12.10 0.00 3.27
283 285 8.939201 ATGAACTACATACAGACTGAAATGAG 57.061 34.615 21.47 17.00 37.46 2.90
316 318 9.383519 GTTCACTATTATGAGATGTTTTGGAGA 57.616 33.333 0.00 0.00 0.00 3.71
317 319 8.331022 CGTTCACTATTATGAGATGTTTTGGAG 58.669 37.037 0.00 0.00 0.00 3.86
318 320 7.279981 CCGTTCACTATTATGAGATGTTTTGGA 59.720 37.037 0.00 0.00 0.00 3.53
319 321 7.279981 TCCGTTCACTATTATGAGATGTTTTGG 59.720 37.037 0.00 0.00 0.00 3.28
320 322 8.196802 TCCGTTCACTATTATGAGATGTTTTG 57.803 34.615 0.00 0.00 0.00 2.44
321 323 7.495934 CCTCCGTTCACTATTATGAGATGTTTT 59.504 37.037 0.00 0.00 0.00 2.43
322 324 6.986817 CCTCCGTTCACTATTATGAGATGTTT 59.013 38.462 0.00 0.00 0.00 2.83
336 338 0.037303 TCGTACTCCCTCCGTTCACT 59.963 55.000 0.00 0.00 0.00 3.41
345 347 6.541278 GGCATTACTTTTAATTCGTACTCCCT 59.459 38.462 0.00 0.00 0.00 4.20
346 348 6.316890 TGGCATTACTTTTAATTCGTACTCCC 59.683 38.462 0.00 0.00 0.00 4.30
354 356 6.456795 AGGCTCTGGCATTACTTTTAATTC 57.543 37.500 0.00 0.00 40.87 2.17
400 432 2.911926 GCCCCTGGGAGAAGTTGCT 61.912 63.158 16.20 0.00 37.50 3.91
401 433 2.361737 GCCCCTGGGAGAAGTTGC 60.362 66.667 16.20 2.80 37.50 4.17
407 449 0.925720 ATTCATTGGCCCCTGGGAGA 60.926 55.000 16.20 0.00 37.50 3.71
409 451 0.032217 GAATTCATTGGCCCCTGGGA 60.032 55.000 16.20 0.00 37.50 4.37
441 483 7.984050 AGACTCACAAACATGATAATTCGATCT 59.016 33.333 0.00 0.00 0.00 2.75
452 494 3.316029 CAGGCAAAGACTCACAAACATGA 59.684 43.478 0.00 0.00 0.00 3.07
471 513 7.621428 AGACTCACAAACATGATAATTCAGG 57.379 36.000 0.00 0.00 39.53 3.86
472 514 9.338291 CAAAGACTCACAAACATGATAATTCAG 57.662 33.333 0.00 0.00 34.73 3.02
473 515 7.809331 GCAAAGACTCACAAACATGATAATTCA 59.191 33.333 0.00 0.00 36.00 2.57
474 516 7.274250 GGCAAAGACTCACAAACATGATAATTC 59.726 37.037 0.00 0.00 0.00 2.17
476 518 6.435277 AGGCAAAGACTCACAAACATGATAAT 59.565 34.615 0.00 0.00 0.00 1.28
477 519 5.769662 AGGCAAAGACTCACAAACATGATAA 59.230 36.000 0.00 0.00 0.00 1.75
478 520 5.181811 CAGGCAAAGACTCACAAACATGATA 59.818 40.000 0.00 0.00 0.00 2.15
480 522 3.316029 CAGGCAAAGACTCACAAACATGA 59.684 43.478 0.00 0.00 0.00 3.07
481 523 3.067180 ACAGGCAAAGACTCACAAACATG 59.933 43.478 0.00 0.00 0.00 3.21
482 524 3.290710 ACAGGCAAAGACTCACAAACAT 58.709 40.909 0.00 0.00 0.00 2.71
483 525 2.722094 ACAGGCAAAGACTCACAAACA 58.278 42.857 0.00 0.00 0.00 2.83
484 526 6.554334 TTATACAGGCAAAGACTCACAAAC 57.446 37.500 0.00 0.00 0.00 2.93
485 527 6.206634 CCTTTATACAGGCAAAGACTCACAAA 59.793 38.462 0.00 0.00 34.35 2.83
486 528 5.705441 CCTTTATACAGGCAAAGACTCACAA 59.295 40.000 0.00 0.00 34.35 3.33
487 529 5.221843 ACCTTTATACAGGCAAAGACTCACA 60.222 40.000 4.76 0.00 37.47 3.58
488 530 5.246307 ACCTTTATACAGGCAAAGACTCAC 58.754 41.667 4.76 0.00 37.47 3.51
489 531 5.499004 ACCTTTATACAGGCAAAGACTCA 57.501 39.130 4.76 0.00 37.47 3.41
490 532 5.705905 ACAACCTTTATACAGGCAAAGACTC 59.294 40.000 4.76 0.00 37.47 3.36
491 533 5.631119 ACAACCTTTATACAGGCAAAGACT 58.369 37.500 4.76 0.00 37.47 3.24
492 534 5.959618 ACAACCTTTATACAGGCAAAGAC 57.040 39.130 4.76 0.00 37.47 3.01
493 535 6.065374 TCAACAACCTTTATACAGGCAAAGA 58.935 36.000 4.76 0.00 37.47 2.52
494 536 6.325919 TCAACAACCTTTATACAGGCAAAG 57.674 37.500 4.76 0.00 37.47 2.77
495 537 6.909550 ATCAACAACCTTTATACAGGCAAA 57.090 33.333 4.76 0.00 37.47 3.68
496 538 7.172342 ACTATCAACAACCTTTATACAGGCAA 58.828 34.615 4.76 0.00 37.47 4.52
497 539 6.717289 ACTATCAACAACCTTTATACAGGCA 58.283 36.000 4.76 0.00 37.47 4.75
498 540 7.042925 CGTACTATCAACAACCTTTATACAGGC 60.043 40.741 4.76 0.00 37.47 4.85
499 541 7.977853 ACGTACTATCAACAACCTTTATACAGG 59.022 37.037 3.23 3.23 40.23 4.00
500 542 8.922058 ACGTACTATCAACAACCTTTATACAG 57.078 34.615 0.00 0.00 0.00 2.74
501 543 9.787532 GTACGTACTATCAACAACCTTTATACA 57.212 33.333 18.47 0.00 0.00 2.29
502 544 9.787532 TGTACGTACTATCAACAACCTTTATAC 57.212 33.333 25.12 0.00 0.00 1.47
503 545 9.787532 GTGTACGTACTATCAACAACCTTTATA 57.212 33.333 25.12 0.00 0.00 0.98
504 546 8.306038 TGTGTACGTACTATCAACAACCTTTAT 58.694 33.333 25.12 0.00 0.00 1.40
505 547 7.656412 TGTGTACGTACTATCAACAACCTTTA 58.344 34.615 25.12 0.00 0.00 1.85
506 548 6.514947 TGTGTACGTACTATCAACAACCTTT 58.485 36.000 25.12 0.00 0.00 3.11
507 549 6.088016 TGTGTACGTACTATCAACAACCTT 57.912 37.500 25.12 0.00 0.00 3.50
508 550 5.710513 TGTGTACGTACTATCAACAACCT 57.289 39.130 25.12 0.00 0.00 3.50
509 551 6.956299 AATGTGTACGTACTATCAACAACC 57.044 37.500 25.12 0.00 0.00 3.77
510 552 8.375465 GGTAAATGTGTACGTACTATCAACAAC 58.625 37.037 25.12 14.79 0.00 3.32
511 553 7.545265 GGGTAAATGTGTACGTACTATCAACAA 59.455 37.037 25.12 4.88 0.00 2.83
524 583 8.466798 AGAGCAAAATTATGGGTAAATGTGTAC 58.533 33.333 0.00 0.00 0.00 2.90
528 587 7.716799 TCAGAGCAAAATTATGGGTAAATGT 57.283 32.000 0.00 0.00 0.00 2.71
540 599 5.680594 TTATGGGCAATCAGAGCAAAATT 57.319 34.783 0.00 0.00 0.00 1.82
555 614 3.513515 TGGTTGACAGGAAAATTATGGGC 59.486 43.478 0.00 0.00 0.00 5.36
556 615 5.011533 TGTTGGTTGACAGGAAAATTATGGG 59.988 40.000 0.00 0.00 0.00 4.00
566 625 6.723298 AAATAACATTGTTGGTTGACAGGA 57.277 33.333 12.30 0.00 0.00 3.86
570 629 8.434661 CAAGCATAAATAACATTGTTGGTTGAC 58.565 33.333 17.59 2.91 35.20 3.18
575 634 7.903995 AACCAAGCATAAATAACATTGTTGG 57.096 32.000 12.30 4.03 38.31 3.77
583 642 7.861176 TGAAACGAAACCAAGCATAAATAAC 57.139 32.000 0.00 0.00 0.00 1.89
584 643 8.873215 TTTGAAACGAAACCAAGCATAAATAA 57.127 26.923 0.00 0.00 0.00 1.40
585 644 9.134734 GATTTGAAACGAAACCAAGCATAAATA 57.865 29.630 0.00 0.00 0.00 1.40
586 645 7.872483 AGATTTGAAACGAAACCAAGCATAAAT 59.128 29.630 0.00 0.00 0.00 1.40
587 646 7.206687 AGATTTGAAACGAAACCAAGCATAAA 58.793 30.769 0.00 0.00 0.00 1.40
588 647 6.744112 AGATTTGAAACGAAACCAAGCATAA 58.256 32.000 0.00 0.00 0.00 1.90
589 648 6.016693 TGAGATTTGAAACGAAACCAAGCATA 60.017 34.615 0.00 0.00 0.00 3.14
590 649 5.200368 AGATTTGAAACGAAACCAAGCAT 57.800 34.783 0.00 0.00 0.00 3.79
591 650 4.097135 TGAGATTTGAAACGAAACCAAGCA 59.903 37.500 0.00 0.00 0.00 3.91
592 651 4.606961 TGAGATTTGAAACGAAACCAAGC 58.393 39.130 0.00 0.00 0.00 4.01
593 652 6.060028 TCTGAGATTTGAAACGAAACCAAG 57.940 37.500 0.00 0.00 0.00 3.61
594 653 6.443934 TTCTGAGATTTGAAACGAAACCAA 57.556 33.333 0.00 0.00 0.00 3.67
595 654 6.443934 TTTCTGAGATTTGAAACGAAACCA 57.556 33.333 0.00 0.00 0.00 3.67
596 655 6.417930 CCTTTTCTGAGATTTGAAACGAAACC 59.582 38.462 0.00 0.00 32.72 3.27
597 656 6.972901 ACCTTTTCTGAGATTTGAAACGAAAC 59.027 34.615 0.00 0.00 32.72 2.78
598 657 7.095695 ACCTTTTCTGAGATTTGAAACGAAA 57.904 32.000 0.00 0.00 32.72 3.46
599 658 6.693315 ACCTTTTCTGAGATTTGAAACGAA 57.307 33.333 0.00 0.00 32.72 3.85
600 659 6.764085 TGTACCTTTTCTGAGATTTGAAACGA 59.236 34.615 0.00 0.00 32.72 3.85
601 660 6.954944 TGTACCTTTTCTGAGATTTGAAACG 58.045 36.000 0.00 0.00 32.72 3.60
602 661 9.750125 AATTGTACCTTTTCTGAGATTTGAAAC 57.250 29.630 0.00 0.00 32.72 2.78
604 663 9.748708 CAAATTGTACCTTTTCTGAGATTTGAA 57.251 29.630 0.00 0.00 35.22 2.69
605 664 9.130661 TCAAATTGTACCTTTTCTGAGATTTGA 57.869 29.630 0.00 0.00 38.14 2.69
606 665 9.403110 CTCAAATTGTACCTTTTCTGAGATTTG 57.597 33.333 0.00 0.00 34.80 2.32
607 666 9.136323 ACTCAAATTGTACCTTTTCTGAGATTT 57.864 29.630 11.47 0.00 0.00 2.17
608 667 8.697507 ACTCAAATTGTACCTTTTCTGAGATT 57.302 30.769 11.47 0.00 0.00 2.40
609 668 7.939039 TGACTCAAATTGTACCTTTTCTGAGAT 59.061 33.333 11.47 0.73 0.00 2.75
610 669 7.279615 TGACTCAAATTGTACCTTTTCTGAGA 58.720 34.615 11.47 0.00 0.00 3.27
611 670 7.227512 ACTGACTCAAATTGTACCTTTTCTGAG 59.772 37.037 0.00 0.00 0.00 3.35
612 671 7.054124 ACTGACTCAAATTGTACCTTTTCTGA 58.946 34.615 0.00 0.00 0.00 3.27
613 672 7.264373 ACTGACTCAAATTGTACCTTTTCTG 57.736 36.000 0.00 0.00 0.00 3.02
614 673 7.556275 TGAACTGACTCAAATTGTACCTTTTCT 59.444 33.333 0.00 0.00 0.00 2.52
615 674 7.703328 TGAACTGACTCAAATTGTACCTTTTC 58.297 34.615 0.00 0.00 0.00 2.29
616 675 7.639113 TGAACTGACTCAAATTGTACCTTTT 57.361 32.000 0.00 0.00 0.00 2.27
617 676 7.339466 AGTTGAACTGACTCAAATTGTACCTTT 59.661 33.333 0.00 0.00 37.08 3.11
618 677 6.828785 AGTTGAACTGACTCAAATTGTACCTT 59.171 34.615 0.00 0.00 37.08 3.50
619 678 6.357367 AGTTGAACTGACTCAAATTGTACCT 58.643 36.000 0.00 0.00 37.08 3.08
620 679 6.619801 AGTTGAACTGACTCAAATTGTACC 57.380 37.500 0.00 0.00 37.08 3.34
621 680 8.138365 TGTAGTTGAACTGACTCAAATTGTAC 57.862 34.615 8.33 0.00 37.08 2.90
622 681 8.773645 CATGTAGTTGAACTGACTCAAATTGTA 58.226 33.333 8.33 0.00 37.08 2.41
623 682 7.255242 CCATGTAGTTGAACTGACTCAAATTGT 60.255 37.037 8.33 0.00 37.08 2.71
624 683 7.041167 TCCATGTAGTTGAACTGACTCAAATTG 60.041 37.037 8.33 0.00 37.08 2.32
625 684 6.998074 TCCATGTAGTTGAACTGACTCAAATT 59.002 34.615 8.33 0.00 37.08 1.82
626 685 6.533730 TCCATGTAGTTGAACTGACTCAAAT 58.466 36.000 8.33 3.59 37.08 2.32
627 686 5.924356 TCCATGTAGTTGAACTGACTCAAA 58.076 37.500 8.33 0.00 37.08 2.69
628 687 5.545063 TCCATGTAGTTGAACTGACTCAA 57.455 39.130 8.33 0.00 32.89 3.02
629 688 5.163353 TGTTCCATGTAGTTGAACTGACTCA 60.163 40.000 8.33 2.82 39.24 3.41
630 689 5.297547 TGTTCCATGTAGTTGAACTGACTC 58.702 41.667 8.33 0.00 39.24 3.36
631 690 5.290493 TGTTCCATGTAGTTGAACTGACT 57.710 39.130 8.33 0.00 39.24 3.41
639 698 2.553602 TGCTGCTTGTTCCATGTAGTTG 59.446 45.455 0.00 0.00 0.00 3.16
671 730 4.515191 TGAAGATGGCAACTTGTGTAGTTC 59.485 41.667 15.17 0.00 45.29 3.01
679 738 1.542915 CTGGGTGAAGATGGCAACTTG 59.457 52.381 15.17 0.00 37.61 3.16
680 739 1.145738 ACTGGGTGAAGATGGCAACTT 59.854 47.619 9.99 9.99 37.61 2.66
681 740 0.773644 ACTGGGTGAAGATGGCAACT 59.226 50.000 0.00 0.00 37.61 3.16
689 748 4.104102 AGTTCATTGGTTACTGGGTGAAGA 59.896 41.667 0.00 0.00 0.00 2.87
690 749 4.398319 AGTTCATTGGTTACTGGGTGAAG 58.602 43.478 0.00 0.00 0.00 3.02
700 759 7.867305 TTGCGGAATAATAGTTCATTGGTTA 57.133 32.000 0.00 0.00 0.00 2.85
701 760 6.767524 TTGCGGAATAATAGTTCATTGGTT 57.232 33.333 0.00 0.00 0.00 3.67
724 783 9.628746 GCCAATAATTCATTGCATTTTCTTTTT 57.371 25.926 0.00 0.00 42.40 1.94
725 784 8.794553 TGCCAATAATTCATTGCATTTTCTTTT 58.205 25.926 0.00 0.00 42.40 2.27
726 785 8.338072 TGCCAATAATTCATTGCATTTTCTTT 57.662 26.923 0.00 0.00 42.40 2.52
727 786 7.414762 GCTGCCAATAATTCATTGCATTTTCTT 60.415 33.333 0.00 0.00 42.40 2.52
728 787 6.037830 GCTGCCAATAATTCATTGCATTTTCT 59.962 34.615 0.00 0.00 42.40 2.52
729 788 6.037830 AGCTGCCAATAATTCATTGCATTTTC 59.962 34.615 0.00 0.00 42.40 2.29
730 789 5.883673 AGCTGCCAATAATTCATTGCATTTT 59.116 32.000 0.00 0.00 42.40 1.82
731 790 5.433526 AGCTGCCAATAATTCATTGCATTT 58.566 33.333 0.00 0.00 42.40 2.32
732 791 5.031066 AGCTGCCAATAATTCATTGCATT 57.969 34.783 0.00 0.00 42.40 3.56
733 792 4.682778 AGCTGCCAATAATTCATTGCAT 57.317 36.364 0.00 0.00 42.40 3.96
734 793 4.475051 AAGCTGCCAATAATTCATTGCA 57.525 36.364 0.00 0.00 42.40 4.08
735 794 4.871557 TCAAAGCTGCCAATAATTCATTGC 59.128 37.500 0.00 0.00 42.40 3.56
741 800 4.475051 TGCATCAAAGCTGCCAATAATT 57.525 36.364 0.00 0.00 38.89 1.40
745 804 1.138266 GGATGCATCAAAGCTGCCAAT 59.862 47.619 27.25 0.00 38.89 3.16
753 812 2.028420 TGTCCTCGGATGCATCAAAG 57.972 50.000 27.25 21.32 0.00 2.77
772 831 5.357878 CAGCACAGGTAATATGGTGATGTTT 59.642 40.000 0.00 0.00 42.98 2.83
776 835 4.454678 CACAGCACAGGTAATATGGTGAT 58.545 43.478 9.42 0.00 42.98 3.06
777 836 3.872696 CACAGCACAGGTAATATGGTGA 58.127 45.455 9.42 0.00 42.98 4.02
778 837 2.355756 GCACAGCACAGGTAATATGGTG 59.644 50.000 1.38 1.38 45.19 4.17
779 838 2.239654 AGCACAGCACAGGTAATATGGT 59.760 45.455 0.00 0.00 0.00 3.55
780 839 2.615447 CAGCACAGCACAGGTAATATGG 59.385 50.000 0.00 0.00 0.00 2.74
781 840 2.615447 CCAGCACAGCACAGGTAATATG 59.385 50.000 0.00 0.00 0.00 1.78
782 841 2.239654 ACCAGCACAGCACAGGTAATAT 59.760 45.455 0.00 0.00 31.02 1.28
783 842 1.628340 ACCAGCACAGCACAGGTAATA 59.372 47.619 0.00 0.00 31.02 0.98
784 843 0.401738 ACCAGCACAGCACAGGTAAT 59.598 50.000 0.00 0.00 31.02 1.89
794 853 2.421424 GGCAAGATTAAGACCAGCACAG 59.579 50.000 0.00 0.00 0.00 3.66
804 863 4.142622 TGTCGATTTGCTGGCAAGATTAAG 60.143 41.667 8.04 0.15 37.24 1.85
823 882 3.427161 TGTGATGCATAGAGAGTGTCG 57.573 47.619 0.00 0.00 0.00 4.35
825 884 3.118482 CCCTTGTGATGCATAGAGAGTGT 60.118 47.826 0.00 0.00 0.00 3.55
828 887 3.133542 TGTCCCTTGTGATGCATAGAGAG 59.866 47.826 0.00 0.00 0.00 3.20
844 903 1.747444 AGGAGGTGATGTTTGTCCCT 58.253 50.000 0.00 0.00 0.00 4.20
845 904 2.162681 CAAGGAGGTGATGTTTGTCCC 58.837 52.381 0.00 0.00 0.00 4.46
875 964 2.014010 TGCTTTTTCTGGGCAGGAAT 57.986 45.000 0.00 0.00 0.00 3.01
876 965 1.786937 TTGCTTTTTCTGGGCAGGAA 58.213 45.000 0.00 0.00 37.28 3.36
878 967 1.541015 GGTTTGCTTTTTCTGGGCAGG 60.541 52.381 0.00 0.00 37.28 4.85
879 968 1.869342 CGGTTTGCTTTTTCTGGGCAG 60.869 52.381 0.00 0.00 37.28 4.85
880 969 0.103937 CGGTTTGCTTTTTCTGGGCA 59.896 50.000 0.00 0.00 0.00 5.36
881 970 0.387565 TCGGTTTGCTTTTTCTGGGC 59.612 50.000 0.00 0.00 0.00 5.36
882 971 1.602920 GCTCGGTTTGCTTTTTCTGGG 60.603 52.381 0.00 0.00 0.00 4.45
886 975 1.131771 GCAGCTCGGTTTGCTTTTTC 58.868 50.000 0.00 0.00 38.92 2.29
887 976 0.249447 GGCAGCTCGGTTTGCTTTTT 60.249 50.000 0.00 0.00 38.92 1.94
893 982 3.575965 ATTTAAAGGCAGCTCGGTTTG 57.424 42.857 0.00 0.00 0.00 2.93
897 986 1.202114 TGCAATTTAAAGGCAGCTCGG 59.798 47.619 11.94 0.00 32.95 4.63
903 992 3.465742 TTGCACTGCAATTTAAAGGCA 57.534 38.095 12.59 14.41 43.99 4.75
923 1012 2.765135 CTGTGGAGATGATGAGTGAGGT 59.235 50.000 0.00 0.00 0.00 3.85
1657 1778 2.458951 CGGACAACAACACCAAACATG 58.541 47.619 0.00 0.00 0.00 3.21
1712 1847 0.321298 TTGCTCGGCAGGTAGGTTTC 60.321 55.000 0.00 0.00 40.61 2.78
1732 1869 1.868997 CAGTACTTGGTTGCCTGCG 59.131 57.895 0.00 0.00 0.00 5.18
1768 1905 7.479352 TCAACATCATTTCACCACCAAATAT 57.521 32.000 0.00 0.00 0.00 1.28
1769 1906 6.907853 TCAACATCATTTCACCACCAAATA 57.092 33.333 0.00 0.00 0.00 1.40
1793 1930 3.509575 ACGACATTGCAAACCCACATAAT 59.490 39.130 1.71 0.00 0.00 1.28
1801 1938 3.559238 ATCAAGACGACATTGCAAACC 57.441 42.857 1.71 0.00 0.00 3.27
1833 1970 4.021981 TCCAAACATCAACACACACAAACA 60.022 37.500 0.00 0.00 0.00 2.83
1894 2033 3.305744 GGCACAACCCAATACAAAATCGT 60.306 43.478 0.00 0.00 0.00 3.73
1959 2100 4.568152 ATGCCAAACTGAAACTGTGTAC 57.432 40.909 0.00 0.00 0.00 2.90
2171 2326 6.618592 GCATTCACTACACCACAATATATCGC 60.619 42.308 0.00 0.00 0.00 4.58
2255 2424 5.827797 ACGCCACAGAAACATCCAAATATAT 59.172 36.000 0.00 0.00 0.00 0.86
2360 2530 3.758554 CTGTACACCATTTTGGGGAGAAG 59.241 47.826 2.09 0.00 46.22 2.85
2449 4148 6.182507 TCCATGGTTACAAGTAAACTCTGT 57.817 37.500 12.58 4.27 34.02 3.41
2450 4149 7.504924 TTTCCATGGTTACAAGTAAACTCTG 57.495 36.000 12.58 6.81 34.02 3.35
2487 4928 4.708177 AGTTGTGTCTGTTATGCAACTCT 58.292 39.130 0.00 0.00 44.10 3.24
2573 5014 0.030504 CGCATGTTGTGGCTTGTGAA 59.969 50.000 0.00 0.00 0.00 3.18
2581 5022 5.624900 GTGTAATAATATGCGCATGTTGTGG 59.375 40.000 34.11 0.00 0.00 4.17


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.