Multiple sequence alignment - TraesCS4B01G008600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G008600 chr4B 100.000 1938 0 0 1 1938 5531758 5529821 0.000000e+00 3579.0
1 TraesCS4B01G008600 chr4B 100.000 686 0 0 2162 2847 5529597 5528912 0.000000e+00 1267.0
2 TraesCS4B01G008600 chr4B 81.933 476 71 10 1415 1887 5521619 5521156 3.440000e-104 388.0
3 TraesCS4B01G008600 chr4B 81.818 341 52 8 962 1297 5521951 5521616 7.770000e-71 278.0
4 TraesCS4B01G008600 chr4B 88.172 186 17 3 383 566 51675897 51675715 1.720000e-52 217.0
5 TraesCS4B01G008600 chr4A 91.125 1262 78 14 693 1938 601177814 601176571 0.000000e+00 1679.0
6 TraesCS4B01G008600 chr4A 88.690 336 34 3 1415 1748 601155539 601155206 9.500000e-110 407.0
7 TraesCS4B01G008600 chr4A 97.059 170 5 0 1 170 601177982 601177813 1.290000e-73 287.0
8 TraesCS4B01G008600 chr4A 81.176 340 57 4 962 1297 601155871 601155535 1.680000e-67 267.0
9 TraesCS4B01G008600 chr4A 93.182 176 12 0 2162 2337 601176515 601176340 2.810000e-65 259.0
10 TraesCS4B01G008600 chr4A 91.195 159 14 0 169 327 244230190 244230032 1.720000e-52 217.0
11 TraesCS4B01G008600 chr4A 90.833 120 10 1 576 694 204180542 204180661 2.940000e-35 159.0
12 TraesCS4B01G008600 chr4A 90.833 120 10 1 576 694 244230147 244230028 2.940000e-35 159.0
13 TraesCS4B01G008600 chr4A 97.500 40 0 1 336 375 346685140 346685178 1.830000e-07 67.6
14 TraesCS4B01G008600 chrUn 88.741 1279 86 24 696 1938 60942963 60941707 0.000000e+00 1511.0
15 TraesCS4B01G008600 chrUn 86.679 533 45 13 2162 2683 60933201 60932684 4.120000e-158 568.0
16 TraesCS4B01G008600 chrUn 82.387 511 61 14 2162 2645 60941651 60941143 4.390000e-113 418.0
17 TraesCS4B01G008600 chrUn 82.667 450 68 5 1415 1862 60927592 60927151 9.560000e-105 390.0
18 TraesCS4B01G008600 chrUn 82.596 339 53 6 962 1297 60927924 60927589 7.710000e-76 294.0
19 TraesCS4B01G008600 chrUn 96.491 171 6 0 1 171 60943134 60942964 1.670000e-72 283.0
20 TraesCS4B01G008600 chrUn 87.778 180 19 2 384 563 47298113 47297937 1.030000e-49 207.0
21 TraesCS4B01G008600 chrUn 87.778 180 19 2 384 563 47305906 47306082 1.030000e-49 207.0
22 TraesCS4B01G008600 chr7D 89.247 186 17 2 378 563 49663675 49663493 2.210000e-56 230.0
23 TraesCS4B01G008600 chr7D 91.824 159 12 1 169 327 382733644 382733801 1.330000e-53 220.0
24 TraesCS4B01G008600 chr7D 90.244 123 11 1 576 698 382733687 382733808 2.940000e-35 159.0
25 TraesCS4B01G008600 chr3D 91.411 163 13 1 165 327 338164423 338164262 3.690000e-54 222.0
26 TraesCS4B01G008600 chr3D 90.833 120 10 1 576 694 338164377 338164258 2.940000e-35 159.0
27 TraesCS4B01G008600 chr3D 97.674 43 0 1 337 378 360568721 360568763 3.930000e-09 73.1
28 TraesCS4B01G008600 chr1A 88.235 187 20 2 378 563 586743764 586743949 3.690000e-54 222.0
29 TraesCS4B01G008600 chr5B 89.011 182 15 4 383 563 564185655 564185832 1.330000e-53 220.0
30 TraesCS4B01G008600 chr2B 90.798 163 15 0 165 327 512624083 512624245 4.780000e-53 219.0
31 TraesCS4B01G008600 chr5D 90.798 163 14 1 165 327 101809923 101809762 1.720000e-52 217.0
32 TraesCS4B01G008600 chr5D 90.833 120 10 1 576 694 101809877 101809758 2.940000e-35 159.0
33 TraesCS4B01G008600 chr7A 88.043 184 19 2 383 566 732805772 732805592 6.180000e-52 215.0
34 TraesCS4B01G008600 chr6A 90.184 163 16 0 165 327 216194059 216194221 2.220000e-51 213.0
35 TraesCS4B01G008600 chr7B 87.302 189 19 3 377 563 639504817 639505002 7.990000e-51 211.0
36 TraesCS4B01G008600 chr7B 90.566 159 15 0 169 327 695503180 695503338 7.990000e-51 211.0
37 TraesCS4B01G008600 chr7B 97.561 41 1 0 337 377 673438155 673438195 1.420000e-08 71.3
38 TraesCS4B01G008600 chr5A 90.303 165 11 5 165 327 422444468 422444307 7.990000e-51 211.0
39 TraesCS4B01G008600 chr5A 84.874 119 16 1 595 711 491240762 491240644 4.980000e-23 119.0
40 TraesCS4B01G008600 chr1D 90.184 163 15 1 165 327 207810885 207810724 7.990000e-51 211.0
41 TraesCS4B01G008600 chr1D 90.833 120 10 1 576 694 216825200 216825081 2.940000e-35 159.0
42 TraesCS4B01G008600 chr1D 100.000 38 0 0 341 378 9267352 9267315 1.420000e-08 71.3
43 TraesCS4B01G008600 chr3A 86.772 189 19 5 378 563 684643643 684643458 3.720000e-49 206.0
44 TraesCS4B01G008600 chr3A 91.667 120 9 1 576 694 343808558 343808677 6.310000e-37 165.0
45 TraesCS4B01G008600 chr2D 91.667 120 9 1 576 694 476515266 476515147 6.310000e-37 165.0
46 TraesCS4B01G008600 chr2A 90.833 120 10 1 576 694 245782602 245782483 2.940000e-35 159.0
47 TraesCS4B01G008600 chr4D 97.674 43 0 1 336 378 386984676 386984717 3.930000e-09 73.1
48 TraesCS4B01G008600 chr4D 100.000 38 0 0 341 378 455326589 455326552 1.420000e-08 71.3
49 TraesCS4B01G008600 chr3B 100.000 39 0 0 341 379 5745776 5745738 3.930000e-09 73.1
50 TraesCS4B01G008600 chr3B 95.349 43 1 1 336 378 526693537 526693578 1.830000e-07 67.6
51 TraesCS4B01G008600 chr6B 97.500 40 0 1 336 375 644487826 644487864 1.830000e-07 67.6


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G008600 chr4B 5528912 5531758 2846 True 2423.000000 3579 100.000000 1 2847 2 chr4B.!!$R3 2846
1 TraesCS4B01G008600 chr4B 5521156 5521951 795 True 333.000000 388 81.875500 962 1887 2 chr4B.!!$R2 925
2 TraesCS4B01G008600 chr4A 601176340 601177982 1642 True 741.666667 1679 93.788667 1 2337 3 chr4A.!!$R3 2336
3 TraesCS4B01G008600 chr4A 601155206 601155871 665 True 337.000000 407 84.933000 962 1748 2 chr4A.!!$R2 786
4 TraesCS4B01G008600 chrUn 60941143 60943134 1991 True 737.333333 1511 89.206333 1 2645 3 chrUn.!!$R4 2644
5 TraesCS4B01G008600 chrUn 60932684 60933201 517 True 568.000000 568 86.679000 2162 2683 1 chrUn.!!$R2 521
6 TraesCS4B01G008600 chrUn 60927151 60927924 773 True 342.000000 390 82.631500 962 1862 2 chrUn.!!$R3 900

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
331 332 0.323629 TTTAGGAACAGAGGGCACGG 59.676 55.0 0.00 0.0 0.0 4.94 F
332 333 0.543410 TTAGGAACAGAGGGCACGGA 60.543 55.0 0.00 0.0 0.0 4.69 F
1442 1496 0.320771 AGAGCTGCTTTACGTGGTGG 60.321 55.0 2.53 0.0 0.0 4.61 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1423 1477 0.320771 CCACCACGTAAAGCAGCTCT 60.321 55.000 0.0 0.0 0.00 4.09 R
1768 1822 1.614317 GCTGCACCACCATTCTTAGGT 60.614 52.381 0.0 0.0 40.85 3.08 R
2772 2876 0.392060 CACCTAACTTACGCCACCCC 60.392 60.000 0.0 0.0 0.00 4.95 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 1.350071 AACTGGCCAATTCCATGCAA 58.650 45.000 7.01 0.00 35.22 4.08
132 133 6.094603 GCCTCAACTTGACAAATATGATCTGT 59.905 38.462 0.00 0.00 0.00 3.41
133 134 7.470079 CCTCAACTTGACAAATATGATCTGTG 58.530 38.462 0.00 0.00 0.00 3.66
164 165 5.693769 ACCCTGCAAGTATGTAATGTAGT 57.306 39.130 0.00 0.00 0.00 2.73
177 178 7.778185 ATGTAATGTAGTACATACTCCCTCC 57.222 40.000 16.08 0.29 41.79 4.30
178 179 5.766670 TGTAATGTAGTACATACTCCCTCCG 59.233 44.000 16.08 0.00 37.97 4.63
179 180 3.939740 TGTAGTACATACTCCCTCCGT 57.060 47.619 0.00 0.00 37.73 4.69
180 181 4.240881 TGTAGTACATACTCCCTCCGTT 57.759 45.455 0.00 0.00 37.73 4.44
181 182 4.202441 TGTAGTACATACTCCCTCCGTTC 58.798 47.826 0.00 0.00 37.73 3.95
182 183 2.664015 AGTACATACTCCCTCCGTTCC 58.336 52.381 0.00 0.00 0.00 3.62
183 184 2.244252 AGTACATACTCCCTCCGTTCCT 59.756 50.000 0.00 0.00 0.00 3.36
184 185 3.461085 AGTACATACTCCCTCCGTTCCTA 59.539 47.826 0.00 0.00 0.00 2.94
185 186 3.393426 ACATACTCCCTCCGTTCCTAA 57.607 47.619 0.00 0.00 0.00 2.69
186 187 3.716431 ACATACTCCCTCCGTTCCTAAA 58.284 45.455 0.00 0.00 0.00 1.85
187 188 4.296056 ACATACTCCCTCCGTTCCTAAAT 58.704 43.478 0.00 0.00 0.00 1.40
188 189 5.461327 ACATACTCCCTCCGTTCCTAAATA 58.539 41.667 0.00 0.00 0.00 1.40
189 190 6.082707 ACATACTCCCTCCGTTCCTAAATAT 58.917 40.000 0.00 0.00 0.00 1.28
190 191 7.243824 ACATACTCCCTCCGTTCCTAAATATA 58.756 38.462 0.00 0.00 0.00 0.86
191 192 7.731688 ACATACTCCCTCCGTTCCTAAATATAA 59.268 37.037 0.00 0.00 0.00 0.98
192 193 6.667558 ACTCCCTCCGTTCCTAAATATAAG 57.332 41.667 0.00 0.00 0.00 1.73
193 194 6.141790 ACTCCCTCCGTTCCTAAATATAAGT 58.858 40.000 0.00 0.00 0.00 2.24
194 195 6.267242 ACTCCCTCCGTTCCTAAATATAAGTC 59.733 42.308 0.00 0.00 0.00 3.01
195 196 6.379579 TCCCTCCGTTCCTAAATATAAGTCT 58.620 40.000 0.00 0.00 0.00 3.24
196 197 6.842807 TCCCTCCGTTCCTAAATATAAGTCTT 59.157 38.462 0.00 0.00 0.00 3.01
197 198 7.346436 TCCCTCCGTTCCTAAATATAAGTCTTT 59.654 37.037 0.00 0.00 0.00 2.52
198 199 7.656542 CCCTCCGTTCCTAAATATAAGTCTTTC 59.343 40.741 0.00 0.00 0.00 2.62
199 200 8.422566 CCTCCGTTCCTAAATATAAGTCTTTCT 58.577 37.037 0.00 0.00 0.00 2.52
215 216 8.970859 AAGTCTTTCTAGATATTTCACCATGG 57.029 34.615 11.19 11.19 31.86 3.66
216 217 8.324191 AGTCTTTCTAGATATTTCACCATGGA 57.676 34.615 21.47 0.00 31.86 3.41
217 218 8.207545 AGTCTTTCTAGATATTTCACCATGGAC 58.792 37.037 21.47 0.00 31.86 4.02
218 219 8.207545 GTCTTTCTAGATATTTCACCATGGACT 58.792 37.037 21.47 0.00 31.86 3.85
219 220 9.434275 TCTTTCTAGATATTTCACCATGGACTA 57.566 33.333 21.47 0.00 0.00 2.59
220 221 9.482627 CTTTCTAGATATTTCACCATGGACTAC 57.517 37.037 21.47 1.35 0.00 2.73
221 222 8.547481 TTCTAGATATTTCACCATGGACTACA 57.453 34.615 21.47 0.00 0.00 2.74
222 223 8.727100 TCTAGATATTTCACCATGGACTACAT 57.273 34.615 21.47 6.11 41.57 2.29
223 224 9.822727 TCTAGATATTTCACCATGGACTACATA 57.177 33.333 21.47 8.17 37.84 2.29
224 225 9.862371 CTAGATATTTCACCATGGACTACATAC 57.138 37.037 21.47 4.24 37.84 2.39
225 226 7.378966 AGATATTTCACCATGGACTACATACG 58.621 38.462 21.47 0.00 37.84 3.06
226 227 3.812156 TTCACCATGGACTACATACGG 57.188 47.619 21.47 0.00 37.84 4.02
227 228 3.021177 TCACCATGGACTACATACGGA 57.979 47.619 21.47 0.00 37.84 4.69
228 229 3.572642 TCACCATGGACTACATACGGAT 58.427 45.455 21.47 0.00 37.84 4.18
229 230 3.320826 TCACCATGGACTACATACGGATG 59.679 47.826 21.47 5.94 37.84 3.51
231 232 4.279922 CACCATGGACTACATACGGATGTA 59.720 45.833 21.47 19.32 44.77 2.29
232 233 5.047306 CACCATGGACTACATACGGATGTAT 60.047 44.000 20.64 11.04 45.42 2.29
233 234 6.152154 CACCATGGACTACATACGGATGTATA 59.848 42.308 20.64 8.48 45.42 1.47
234 235 6.895756 ACCATGGACTACATACGGATGTATAT 59.104 38.462 20.64 12.15 45.42 0.86
235 236 8.057011 ACCATGGACTACATACGGATGTATATA 58.943 37.037 20.64 8.47 45.42 0.86
236 237 8.568794 CCATGGACTACATACGGATGTATATAG 58.431 40.741 20.64 13.28 45.42 1.31
237 238 9.338622 CATGGACTACATACGGATGTATATAGA 57.661 37.037 20.64 5.22 45.42 1.98
238 239 8.728337 TGGACTACATACGGATGTATATAGAC 57.272 38.462 20.64 10.95 45.42 2.59
239 240 8.546322 TGGACTACATACGGATGTATATAGACT 58.454 37.037 20.64 0.00 45.42 3.24
240 241 9.393512 GGACTACATACGGATGTATATAGACTT 57.606 37.037 20.64 0.00 45.42 3.01
261 262 9.531158 AGACTTAGTTTATAGTGTAGGTTGACT 57.469 33.333 0.00 0.00 0.00 3.41
262 263 9.786105 GACTTAGTTTATAGTGTAGGTTGACTC 57.214 37.037 0.00 0.00 0.00 3.36
263 264 9.305555 ACTTAGTTTATAGTGTAGGTTGACTCA 57.694 33.333 0.00 0.00 0.00 3.41
269 270 6.743575 ATAGTGTAGGTTGACTCATTTTGC 57.256 37.500 0.00 0.00 0.00 3.68
270 271 4.718961 AGTGTAGGTTGACTCATTTTGCT 58.281 39.130 0.00 0.00 0.00 3.91
271 272 4.757149 AGTGTAGGTTGACTCATTTTGCTC 59.243 41.667 0.00 0.00 0.00 4.26
272 273 4.757149 GTGTAGGTTGACTCATTTTGCTCT 59.243 41.667 0.00 0.00 0.00 4.09
273 274 4.997395 TGTAGGTTGACTCATTTTGCTCTC 59.003 41.667 0.00 0.00 0.00 3.20
274 275 4.363991 AGGTTGACTCATTTTGCTCTCT 57.636 40.909 0.00 0.00 0.00 3.10
275 276 5.489792 AGGTTGACTCATTTTGCTCTCTA 57.510 39.130 0.00 0.00 0.00 2.43
276 277 6.059787 AGGTTGACTCATTTTGCTCTCTAT 57.940 37.500 0.00 0.00 0.00 1.98
277 278 5.879223 AGGTTGACTCATTTTGCTCTCTATG 59.121 40.000 0.00 0.00 0.00 2.23
278 279 5.448360 GGTTGACTCATTTTGCTCTCTATGC 60.448 44.000 0.00 0.00 0.00 3.14
279 280 4.835678 TGACTCATTTTGCTCTCTATGCA 58.164 39.130 0.00 0.00 38.80 3.96
280 281 4.874396 TGACTCATTTTGCTCTCTATGCAG 59.126 41.667 0.00 0.00 41.71 4.41
281 282 4.841422 ACTCATTTTGCTCTCTATGCAGT 58.159 39.130 0.00 0.00 41.71 4.40
282 283 4.874966 ACTCATTTTGCTCTCTATGCAGTC 59.125 41.667 0.00 0.00 41.71 3.51
283 284 4.194640 TCATTTTGCTCTCTATGCAGTCC 58.805 43.478 0.00 0.00 41.71 3.85
284 285 2.698855 TTTGCTCTCTATGCAGTCCC 57.301 50.000 0.00 0.00 41.71 4.46
285 286 1.871418 TTGCTCTCTATGCAGTCCCT 58.129 50.000 0.00 0.00 41.71 4.20
286 287 1.871418 TGCTCTCTATGCAGTCCCTT 58.129 50.000 0.00 0.00 35.31 3.95
287 288 3.032265 TGCTCTCTATGCAGTCCCTTA 57.968 47.619 0.00 0.00 35.31 2.69
288 289 3.581101 TGCTCTCTATGCAGTCCCTTAT 58.419 45.455 0.00 0.00 35.31 1.73
289 290 3.969976 TGCTCTCTATGCAGTCCCTTATT 59.030 43.478 0.00 0.00 35.31 1.40
290 291 4.202295 TGCTCTCTATGCAGTCCCTTATTG 60.202 45.833 0.00 0.00 35.31 1.90
291 292 4.039730 GCTCTCTATGCAGTCCCTTATTGA 59.960 45.833 0.00 0.00 0.00 2.57
292 293 5.453903 GCTCTCTATGCAGTCCCTTATTGAA 60.454 44.000 0.00 0.00 0.00 2.69
293 294 6.560003 TCTCTATGCAGTCCCTTATTGAAA 57.440 37.500 0.00 0.00 0.00 2.69
294 295 7.141758 TCTCTATGCAGTCCCTTATTGAAAT 57.858 36.000 0.00 0.00 0.00 2.17
295 296 7.220030 TCTCTATGCAGTCCCTTATTGAAATC 58.780 38.462 0.00 0.00 0.00 2.17
296 297 7.071698 TCTCTATGCAGTCCCTTATTGAAATCT 59.928 37.037 0.00 0.00 0.00 2.40
297 298 7.220030 TCTATGCAGTCCCTTATTGAAATCTC 58.780 38.462 0.00 0.00 0.00 2.75
298 299 5.178096 TGCAGTCCCTTATTGAAATCTCA 57.822 39.130 0.00 0.00 0.00 3.27
299 300 5.569355 TGCAGTCCCTTATTGAAATCTCAA 58.431 37.500 0.00 0.00 45.53 3.02
300 301 6.009589 TGCAGTCCCTTATTGAAATCTCAAA 58.990 36.000 0.00 0.00 44.64 2.69
301 302 6.493115 TGCAGTCCCTTATTGAAATCTCAAAA 59.507 34.615 0.00 0.00 44.64 2.44
302 303 7.015098 TGCAGTCCCTTATTGAAATCTCAAAAA 59.985 33.333 0.00 0.00 44.64 1.94
326 327 9.462606 AAAACACTTATATTTAGGAACAGAGGG 57.537 33.333 0.00 0.00 0.00 4.30
327 328 6.592870 ACACTTATATTTAGGAACAGAGGGC 58.407 40.000 0.00 0.00 0.00 5.19
328 329 6.157994 ACACTTATATTTAGGAACAGAGGGCA 59.842 38.462 0.00 0.00 0.00 5.36
329 330 6.483640 CACTTATATTTAGGAACAGAGGGCAC 59.516 42.308 0.00 0.00 0.00 5.01
330 331 2.403252 ATTTAGGAACAGAGGGCACG 57.597 50.000 0.00 0.00 0.00 5.34
331 332 0.323629 TTTAGGAACAGAGGGCACGG 59.676 55.000 0.00 0.00 0.00 4.94
332 333 0.543410 TTAGGAACAGAGGGCACGGA 60.543 55.000 0.00 0.00 0.00 4.69
333 334 0.970937 TAGGAACAGAGGGCACGGAG 60.971 60.000 0.00 0.00 0.00 4.63
334 335 2.266055 GAACAGAGGGCACGGAGG 59.734 66.667 0.00 0.00 0.00 4.30
335 336 3.959991 GAACAGAGGGCACGGAGGC 62.960 68.421 0.00 0.00 43.27 4.70
354 355 6.288941 GAGGCCCTCTCCTAAATATAAGTC 57.711 45.833 2.64 0.00 36.38 3.01
355 356 5.983608 AGGCCCTCTCCTAAATATAAGTCT 58.016 41.667 0.00 0.00 33.95 3.24
356 357 6.394747 AGGCCCTCTCCTAAATATAAGTCTT 58.605 40.000 0.00 0.00 33.95 3.01
357 358 6.852372 AGGCCCTCTCCTAAATATAAGTCTTT 59.148 38.462 0.00 0.00 33.95 2.52
358 359 7.351187 AGGCCCTCTCCTAAATATAAGTCTTTT 59.649 37.037 0.00 0.00 33.95 2.27
359 360 7.999545 GGCCCTCTCCTAAATATAAGTCTTTTT 59.000 37.037 0.00 0.00 0.00 1.94
381 382 9.753674 TTTTTAGAGATTTCAATATGGACCTGT 57.246 29.630 0.00 0.00 0.00 4.00
382 383 8.737168 TTTAGAGATTTCAATATGGACCTGTG 57.263 34.615 0.00 0.00 0.00 3.66
383 384 6.319048 AGAGATTTCAATATGGACCTGTGT 57.681 37.500 0.00 0.00 0.00 3.72
384 385 6.725364 AGAGATTTCAATATGGACCTGTGTT 58.275 36.000 0.00 0.00 0.00 3.32
385 386 7.177878 AGAGATTTCAATATGGACCTGTGTTT 58.822 34.615 0.00 0.00 0.00 2.83
386 387 7.671398 AGAGATTTCAATATGGACCTGTGTTTT 59.329 33.333 0.00 0.00 0.00 2.43
387 388 7.605449 AGATTTCAATATGGACCTGTGTTTTG 58.395 34.615 0.00 0.00 0.00 2.44
388 389 6.968263 TTTCAATATGGACCTGTGTTTTGA 57.032 33.333 0.00 0.00 0.00 2.69
389 390 7.537596 TTTCAATATGGACCTGTGTTTTGAT 57.462 32.000 0.00 0.00 0.00 2.57
390 391 7.537596 TTCAATATGGACCTGTGTTTTGATT 57.462 32.000 0.00 0.00 0.00 2.57
391 392 7.537596 TCAATATGGACCTGTGTTTTGATTT 57.462 32.000 0.00 0.00 0.00 2.17
392 393 7.961351 TCAATATGGACCTGTGTTTTGATTTT 58.039 30.769 0.00 0.00 0.00 1.82
393 394 8.428063 TCAATATGGACCTGTGTTTTGATTTTT 58.572 29.630 0.00 0.00 0.00 1.94
394 395 8.497554 CAATATGGACCTGTGTTTTGATTTTTG 58.502 33.333 0.00 0.00 0.00 2.44
395 396 4.764172 TGGACCTGTGTTTTGATTTTTGG 58.236 39.130 0.00 0.00 0.00 3.28
396 397 4.223923 TGGACCTGTGTTTTGATTTTTGGT 59.776 37.500 0.00 0.00 0.00 3.67
397 398 5.182487 GGACCTGTGTTTTGATTTTTGGTT 58.818 37.500 0.00 0.00 0.00 3.67
398 399 5.645929 GGACCTGTGTTTTGATTTTTGGTTT 59.354 36.000 0.00 0.00 0.00 3.27
399 400 6.403092 GGACCTGTGTTTTGATTTTTGGTTTG 60.403 38.462 0.00 0.00 0.00 2.93
400 401 6.234177 ACCTGTGTTTTGATTTTTGGTTTGA 58.766 32.000 0.00 0.00 0.00 2.69
401 402 6.371271 ACCTGTGTTTTGATTTTTGGTTTGAG 59.629 34.615 0.00 0.00 0.00 3.02
402 403 6.593382 CCTGTGTTTTGATTTTTGGTTTGAGA 59.407 34.615 0.00 0.00 0.00 3.27
403 404 7.280652 CCTGTGTTTTGATTTTTGGTTTGAGAT 59.719 33.333 0.00 0.00 0.00 2.75
404 405 8.558973 TGTGTTTTGATTTTTGGTTTGAGATT 57.441 26.923 0.00 0.00 0.00 2.40
405 406 9.007901 TGTGTTTTGATTTTTGGTTTGAGATTT 57.992 25.926 0.00 0.00 0.00 2.17
406 407 9.838975 GTGTTTTGATTTTTGGTTTGAGATTTT 57.161 25.926 0.00 0.00 0.00 1.82
439 440 3.924238 CCAAGATGGCCGAATTTCG 57.076 52.632 11.81 11.81 40.07 3.46
456 457 8.986039 CGAATTTCGGTCATTTTCAAAAATTT 57.014 26.923 10.95 0.00 34.90 1.82
457 458 9.091255 CGAATTTCGGTCATTTTCAAAAATTTC 57.909 29.630 10.95 0.00 34.90 2.17
458 459 8.986039 AATTTCGGTCATTTTCAAAAATTTCG 57.014 26.923 0.00 3.97 36.52 3.46
459 460 6.517914 TTCGGTCATTTTCAAAAATTTCGG 57.482 33.333 0.00 1.19 36.52 4.30
460 461 4.446051 TCGGTCATTTTCAAAAATTTCGGC 59.554 37.500 0.00 0.00 36.52 5.54
461 462 4.376920 CGGTCATTTTCAAAAATTTCGGCC 60.377 41.667 0.00 0.00 36.52 6.13
462 463 4.513318 GGTCATTTTCAAAAATTTCGGCCA 59.487 37.500 2.24 0.00 36.52 5.36
463 464 5.008118 GGTCATTTTCAAAAATTTCGGCCAA 59.992 36.000 2.24 0.00 36.52 4.52
464 465 6.458888 GGTCATTTTCAAAAATTTCGGCCAAA 60.459 34.615 2.24 2.92 36.52 3.28
465 466 6.969473 GTCATTTTCAAAAATTTCGGCCAAAA 59.031 30.769 2.24 0.00 36.52 2.44
466 467 7.647318 GTCATTTTCAAAAATTTCGGCCAAAAT 59.353 29.630 2.24 0.00 36.52 1.82
467 468 8.193438 TCATTTTCAAAAATTTCGGCCAAAATT 58.807 25.926 8.64 8.64 39.83 1.82
468 469 8.815189 CATTTTCAAAAATTTCGGCCAAAATTT 58.185 25.926 19.32 19.32 45.90 1.82
473 474 5.431420 AAATTTCGGCCAAAATTTTGACC 57.569 34.783 28.44 25.36 43.05 4.02
480 481 5.431420 GGCCAAAATTTTGACCGAAATTT 57.569 34.783 28.44 12.55 45.95 1.82
481 482 5.211454 GGCCAAAATTTTGACCGAAATTTG 58.789 37.500 28.44 11.21 44.26 2.32
482 483 5.008118 GGCCAAAATTTTGACCGAAATTTGA 59.992 36.000 28.44 0.00 44.26 2.69
483 484 5.906838 GCCAAAATTTTGACCGAAATTTGAC 59.093 36.000 28.44 9.12 44.26 3.18
484 485 6.238347 GCCAAAATTTTGACCGAAATTTGACT 60.238 34.615 28.44 4.22 44.26 3.41
485 486 7.042389 GCCAAAATTTTGACCGAAATTTGACTA 60.042 33.333 28.44 0.00 44.26 2.59
486 487 8.821894 CCAAAATTTTGACCGAAATTTGACTAA 58.178 29.630 28.44 0.00 44.26 2.24
523 524 4.679662 GACCAATTTCGGTCGAAGATAGA 58.320 43.478 5.93 0.00 45.77 1.98
524 525 5.277857 ACCAATTTCGGTCGAAGATAGAT 57.722 39.130 5.93 0.00 40.67 1.98
525 526 5.671493 ACCAATTTCGGTCGAAGATAGATT 58.329 37.500 5.93 0.94 40.67 2.40
526 527 6.113411 ACCAATTTCGGTCGAAGATAGATTT 58.887 36.000 5.93 0.00 40.67 2.17
527 528 6.598064 ACCAATTTCGGTCGAAGATAGATTTT 59.402 34.615 5.93 0.00 40.67 1.82
528 529 6.907212 CCAATTTCGGTCGAAGATAGATTTTG 59.093 38.462 5.93 3.05 40.67 2.44
529 530 5.464965 TTTCGGTCGAAGATAGATTTTGC 57.535 39.130 5.93 0.00 40.67 3.68
530 531 3.454375 TCGGTCGAAGATAGATTTTGCC 58.546 45.455 0.00 0.00 40.67 4.52
531 532 2.544267 CGGTCGAAGATAGATTTTGCCC 59.456 50.000 0.00 0.00 40.67 5.36
532 533 2.879026 GGTCGAAGATAGATTTTGCCCC 59.121 50.000 0.00 0.00 40.67 5.80
533 534 3.541632 GTCGAAGATAGATTTTGCCCCA 58.458 45.455 0.00 0.00 40.67 4.96
534 535 3.561725 GTCGAAGATAGATTTTGCCCCAG 59.438 47.826 0.00 0.00 40.67 4.45
535 536 2.880890 CGAAGATAGATTTTGCCCCAGG 59.119 50.000 0.00 0.00 0.00 4.45
554 555 1.934463 CCGAGATGGCCGAAATTCG 59.066 57.895 8.62 8.62 40.07 3.34
565 566 2.535934 CGAAATTCGGCCGAAATTCA 57.464 45.000 43.90 28.18 41.53 2.57
566 567 2.857618 CGAAATTCGGCCGAAATTCAA 58.142 42.857 43.90 27.55 41.53 2.69
567 568 3.238441 CGAAATTCGGCCGAAATTCAAA 58.762 40.909 43.90 26.91 41.53 2.69
568 569 3.670991 CGAAATTCGGCCGAAATTCAAAA 59.329 39.130 43.90 26.27 41.53 2.44
569 570 4.326009 CGAAATTCGGCCGAAATTCAAAAT 59.674 37.500 43.90 27.62 41.53 1.82
570 571 5.513495 CGAAATTCGGCCGAAATTCAAAATA 59.487 36.000 43.90 25.01 41.53 1.40
571 572 6.505732 CGAAATTCGGCCGAAATTCAAAATAC 60.506 38.462 43.90 28.47 41.53 1.89
572 573 4.768130 TTCGGCCGAAATTCAAAATACA 57.232 36.364 37.13 10.94 0.00 2.29
573 574 4.349663 TCGGCCGAAATTCAAAATACAG 57.650 40.909 28.99 0.00 0.00 2.74
574 575 4.004314 TCGGCCGAAATTCAAAATACAGA 58.996 39.130 28.99 0.00 0.00 3.41
575 576 4.638421 TCGGCCGAAATTCAAAATACAGAT 59.362 37.500 28.99 0.00 0.00 2.90
576 577 5.818336 TCGGCCGAAATTCAAAATACAGATA 59.182 36.000 28.99 0.00 0.00 1.98
577 578 6.485313 TCGGCCGAAATTCAAAATACAGATAT 59.515 34.615 28.99 0.00 0.00 1.63
578 579 6.578545 CGGCCGAAATTCAAAATACAGATATG 59.421 38.462 24.07 0.00 0.00 1.78
579 580 6.863126 GGCCGAAATTCAAAATACAGATATGG 59.137 38.462 0.00 0.00 0.00 2.74
580 581 7.255451 GGCCGAAATTCAAAATACAGATATGGA 60.255 37.037 0.00 0.00 0.00 3.41
581 582 7.591426 GCCGAAATTCAAAATACAGATATGGAC 59.409 37.037 0.00 0.00 0.00 4.02
582 583 8.840321 CCGAAATTCAAAATACAGATATGGACT 58.160 33.333 0.00 0.00 0.00 3.85
589 590 9.908152 TCAAAATACAGATATGGACTACATACG 57.092 33.333 0.00 0.00 44.41 3.06
590 591 9.140286 CAAAATACAGATATGGACTACATACGG 57.860 37.037 0.00 0.00 44.41 4.02
591 592 8.645814 AAATACAGATATGGACTACATACGGA 57.354 34.615 0.00 0.00 44.41 4.69
592 593 5.961396 ACAGATATGGACTACATACGGAC 57.039 43.478 0.00 0.00 44.41 4.79
593 594 5.382616 ACAGATATGGACTACATACGGACA 58.617 41.667 0.00 0.00 44.41 4.02
594 595 6.010850 ACAGATATGGACTACATACGGACAT 58.989 40.000 0.00 0.00 44.41 3.06
595 596 7.173032 ACAGATATGGACTACATACGGACATA 58.827 38.462 0.00 0.00 44.41 2.29
596 597 7.834681 ACAGATATGGACTACATACGGACATAT 59.165 37.037 0.00 0.00 44.41 1.78
597 598 9.338622 CAGATATGGACTACATACGGACATATA 57.661 37.037 0.00 0.00 44.41 0.86
603 604 8.453320 TGGACTACATACGGACATATATAAACG 58.547 37.037 0.00 0.00 0.00 3.60
604 605 8.454106 GGACTACATACGGACATATATAAACGT 58.546 37.037 11.02 11.02 38.23 3.99
624 625 6.006759 ACGTAGTTTAGAGTGTAGGTTCAC 57.993 41.667 0.00 0.00 37.78 3.18
625 626 5.767168 ACGTAGTTTAGAGTGTAGGTTCACT 59.233 40.000 0.00 0.00 45.46 3.41
634 635 4.718961 AGTGTAGGTTCACTCATTTTGCT 58.281 39.130 0.00 0.00 44.07 3.91
635 636 4.757149 AGTGTAGGTTCACTCATTTTGCTC 59.243 41.667 0.00 0.00 44.07 4.26
636 637 4.072131 TGTAGGTTCACTCATTTTGCTCC 58.928 43.478 0.00 0.00 0.00 4.70
637 638 3.228188 AGGTTCACTCATTTTGCTCCA 57.772 42.857 0.00 0.00 0.00 3.86
638 639 3.771216 AGGTTCACTCATTTTGCTCCAT 58.229 40.909 0.00 0.00 0.00 3.41
639 640 4.922206 AGGTTCACTCATTTTGCTCCATA 58.078 39.130 0.00 0.00 0.00 2.74
640 641 5.513233 AGGTTCACTCATTTTGCTCCATAT 58.487 37.500 0.00 0.00 0.00 1.78
641 642 5.359009 AGGTTCACTCATTTTGCTCCATATG 59.641 40.000 0.00 0.00 0.00 1.78
642 643 5.126061 GGTTCACTCATTTTGCTCCATATGT 59.874 40.000 1.24 0.00 0.00 2.29
643 644 6.318648 GGTTCACTCATTTTGCTCCATATGTA 59.681 38.462 1.24 0.00 0.00 2.29
644 645 7.412853 GTTCACTCATTTTGCTCCATATGTAG 58.587 38.462 1.24 0.00 0.00 2.74
645 646 6.653020 TCACTCATTTTGCTCCATATGTAGT 58.347 36.000 1.24 0.00 0.00 2.73
646 647 7.112122 TCACTCATTTTGCTCCATATGTAGTT 58.888 34.615 1.24 0.00 0.00 2.24
647 648 7.280876 TCACTCATTTTGCTCCATATGTAGTTC 59.719 37.037 1.24 0.00 0.00 3.01
648 649 7.066163 CACTCATTTTGCTCCATATGTAGTTCA 59.934 37.037 1.24 0.00 0.00 3.18
649 650 7.776969 ACTCATTTTGCTCCATATGTAGTTCAT 59.223 33.333 1.24 0.00 40.25 2.57
650 651 9.276590 CTCATTTTGCTCCATATGTAGTTCATA 57.723 33.333 1.24 0.00 42.30 2.15
651 652 9.797642 TCATTTTGCTCCATATGTAGTTCATAT 57.202 29.630 1.24 0.00 46.85 1.78
654 655 7.439157 TTGCTCCATATGTAGTTCATATTGC 57.561 36.000 1.24 6.06 44.49 3.56
655 656 6.532826 TGCTCCATATGTAGTTCATATTGCA 58.467 36.000 13.09 13.09 44.49 4.08
656 657 6.997476 TGCTCCATATGTAGTTCATATTGCAA 59.003 34.615 0.00 0.00 44.49 4.08
657 658 7.666804 TGCTCCATATGTAGTTCATATTGCAAT 59.333 33.333 17.56 17.56 44.49 3.56
658 659 8.517878 GCTCCATATGTAGTTCATATTGCAATT 58.482 33.333 18.75 0.21 44.49 2.32
688 689 8.738645 AAAACACTTATATTTAGGAGCAGAGG 57.261 34.615 0.00 0.00 0.00 3.69
689 690 6.426646 ACACTTATATTTAGGAGCAGAGGG 57.573 41.667 0.00 0.00 0.00 4.30
690 691 6.143915 ACACTTATATTTAGGAGCAGAGGGA 58.856 40.000 0.00 0.00 0.00 4.20
691 692 6.268847 ACACTTATATTTAGGAGCAGAGGGAG 59.731 42.308 0.00 0.00 0.00 4.30
692 693 6.268847 CACTTATATTTAGGAGCAGAGGGAGT 59.731 42.308 0.00 0.00 0.00 3.85
693 694 7.451877 CACTTATATTTAGGAGCAGAGGGAGTA 59.548 40.741 0.00 0.00 0.00 2.59
717 718 3.398406 TGACATGAGCACAAACGTGTAT 58.602 40.909 0.00 0.00 35.72 2.29
727 728 4.435518 GCACAAACGTGTATATCACCTGTG 60.436 45.833 15.79 15.79 43.57 3.66
777 778 2.450476 AGCCAATTTGTTCCAGCTAGG 58.550 47.619 0.00 0.00 39.47 3.02
797 806 2.176889 GAGTGTCCCTACAGGCTACAA 58.823 52.381 3.93 0.00 35.91 2.41
800 809 1.272807 GTCCCTACAGGCTACAACCA 58.727 55.000 0.00 0.00 34.51 3.67
801 810 1.838077 GTCCCTACAGGCTACAACCAT 59.162 52.381 0.00 0.00 34.51 3.55
802 811 1.837439 TCCCTACAGGCTACAACCATG 59.163 52.381 0.00 0.00 34.51 3.66
803 812 1.837439 CCCTACAGGCTACAACCATGA 59.163 52.381 0.00 0.00 0.00 3.07
806 815 3.055094 CCTACAGGCTACAACCATGAACT 60.055 47.826 0.00 0.00 0.00 3.01
808 817 2.106511 ACAGGCTACAACCATGAACTGT 59.893 45.455 0.00 0.00 0.00 3.55
809 818 3.326588 ACAGGCTACAACCATGAACTGTA 59.673 43.478 0.00 0.00 0.00 2.74
810 819 4.202419 ACAGGCTACAACCATGAACTGTAA 60.202 41.667 0.00 0.00 0.00 2.41
811 820 4.154195 CAGGCTACAACCATGAACTGTAAC 59.846 45.833 0.00 0.00 0.00 2.50
812 821 4.069304 GGCTACAACCATGAACTGTAACA 58.931 43.478 0.00 0.00 0.00 2.41
813 822 4.083484 GGCTACAACCATGAACTGTAACAC 60.083 45.833 0.00 0.00 0.00 3.32
865 889 2.361757 TGTCACAAGGGCATCAAACTTG 59.638 45.455 0.00 0.00 45.27 3.16
881 905 2.073816 ACTTGGGAAACAACGATAGCG 58.926 47.619 0.00 0.00 44.79 4.26
883 907 2.684001 TGGGAAACAACGATAGCGAT 57.316 45.000 7.69 0.00 41.64 4.58
889 913 1.953559 ACAACGATAGCGATGGCAAT 58.046 45.000 15.15 0.00 43.56 3.56
911 935 3.317603 CAATTTGTTTGGCCCCTACAG 57.682 47.619 0.00 0.00 0.00 2.74
912 936 1.937191 ATTTGTTTGGCCCCTACAGG 58.063 50.000 0.00 0.00 0.00 4.00
991 1028 5.245526 CCCTTCACACAACCTTACTACTACT 59.754 44.000 0.00 0.00 0.00 2.57
992 1029 6.435277 CCCTTCACACAACCTTACTACTACTA 59.565 42.308 0.00 0.00 0.00 1.82
993 1030 7.311408 CCTTCACACAACCTTACTACTACTAC 58.689 42.308 0.00 0.00 0.00 2.73
1039 1079 1.137825 CTCGTCGTCCTCCTTGCTC 59.862 63.158 0.00 0.00 0.00 4.26
1143 1183 1.071699 GGCACCTTCTTCACCTACACA 59.928 52.381 0.00 0.00 0.00 3.72
1156 1196 1.103803 CTACACAGGCCTCTTCGCTA 58.896 55.000 0.00 0.00 0.00 4.26
1157 1197 1.683917 CTACACAGGCCTCTTCGCTAT 59.316 52.381 0.00 0.00 0.00 2.97
1253 1293 3.905678 CTCCTACGCCGCCCTCAG 61.906 72.222 0.00 0.00 0.00 3.35
1318 1358 6.260377 AGGTAACAAAACTTTACACGCTTTC 58.740 36.000 0.00 0.00 41.41 2.62
1322 1362 5.507974 ACAAAACTTTACACGCTTTCTAGC 58.492 37.500 0.00 0.00 44.21 3.42
1324 1364 5.593183 AAACTTTACACGCTTTCTAGCTC 57.407 39.130 0.00 0.00 45.51 4.09
1334 1374 4.510711 ACGCTTTCTAGCTCATCATGATTG 59.489 41.667 5.16 3.28 45.51 2.67
1400 1454 5.578005 ATGTGCTTCTTCTTCCATGATTG 57.422 39.130 0.00 0.00 0.00 2.67
1442 1496 0.320771 AGAGCTGCTTTACGTGGTGG 60.321 55.000 2.53 0.00 0.00 4.61
1447 1501 1.373812 GCTTTACGTGGTGGAGGGT 59.626 57.895 0.00 0.00 0.00 4.34
1558 1612 2.363306 TGGTGCACTTCCAGTTCAAT 57.637 45.000 17.98 0.00 0.00 2.57
1559 1613 3.500448 TGGTGCACTTCCAGTTCAATA 57.500 42.857 17.98 0.00 0.00 1.90
1570 1624 2.632377 CAGTTCAATAGTGGCGACCAT 58.368 47.619 0.00 0.00 35.28 3.55
1658 1712 2.284625 AGTCCGGCATCCCTGACA 60.285 61.111 0.00 0.00 44.95 3.58
1684 1738 2.797515 CGAGAAGTCGCTTCACGTT 58.202 52.632 21.47 5.49 44.78 3.99
1768 1822 0.249120 CTCCAGATACACCGCCAACA 59.751 55.000 0.00 0.00 0.00 3.33
1820 1874 3.191539 GCTTCGCGCTGCTAGCTT 61.192 61.111 17.23 0.00 39.60 3.74
1831 1885 2.510238 CTAGCTTGCTTCGCCGCT 60.510 61.111 0.00 5.36 37.83 5.52
1841 1895 2.462255 CTTCGCCGCTGCATTGTTGT 62.462 55.000 0.00 0.00 37.32 3.32
1913 1968 5.709164 AGGAGCGTAGTCTAAAAGTACTTCA 59.291 40.000 8.95 0.00 32.43 3.02
1916 1971 6.562518 AGCGTAGTCTAAAAGTACTTCATCC 58.437 40.000 8.95 0.00 32.43 3.51
2256 2313 7.011499 AGTTGACACTTGGGTACATAATACA 57.989 36.000 0.00 0.00 0.00 2.29
2257 2314 7.103641 AGTTGACACTTGGGTACATAATACAG 58.896 38.462 0.00 0.00 0.00 2.74
2300 2357 4.614555 TGCAACCGACAAATAGCTAATG 57.385 40.909 0.00 2.74 0.00 1.90
2328 2385 7.147567 TGGATATATTATCCACACACACACACT 60.148 37.037 11.36 0.00 42.81 3.55
2358 2419 9.349713 ACTCAAGAAATAGGTGTTTAATTGACA 57.650 29.630 0.00 0.00 30.30 3.58
2385 2454 6.052360 TCATGCTAGTAAAAGACACAACACA 58.948 36.000 0.00 0.00 0.00 3.72
2408 2477 2.576191 ACTCCCCTTCCAATTTCGATGA 59.424 45.455 0.00 0.00 0.00 2.92
2550 2653 7.094377 GGGCAGTGTTGAATATAAAGACTTCAA 60.094 37.037 0.00 0.00 36.74 2.69
2551 2654 8.296713 GGCAGTGTTGAATATAAAGACTTCAAA 58.703 33.333 1.07 0.00 39.74 2.69
2572 2675 5.551760 AATGAACTTTCTATTCTGGTGCG 57.448 39.130 0.00 0.00 0.00 5.34
2592 2695 4.391830 TGCGAGTGTCATCTAAATTTGTCC 59.608 41.667 0.00 0.00 0.00 4.02
2600 2703 5.637810 GTCATCTAAATTTGTCCGACTCACA 59.362 40.000 0.00 0.00 0.00 3.58
2640 2744 4.321745 GCAAACATGTAAGCAGTTCATTCG 59.678 41.667 15.30 0.00 0.00 3.34
2647 2751 2.105006 AGCAGTTCATTCGATGCTGT 57.895 45.000 8.09 0.00 46.75 4.40
2660 2764 3.325753 GCTGTGAGGCCAGACCCT 61.326 66.667 5.01 0.00 40.58 4.34
2662 2766 1.553690 GCTGTGAGGCCAGACCCTAA 61.554 60.000 5.01 0.00 40.58 2.69
2663 2767 0.250513 CTGTGAGGCCAGACCCTAAC 59.749 60.000 5.01 0.00 40.58 2.34
2673 2777 3.385115 CCAGACCCTAACAAGTCCCTAT 58.615 50.000 0.00 0.00 33.29 2.57
2679 2783 4.227527 ACCCTAACAAGTCCCTATGGAAAG 59.772 45.833 0.00 0.00 44.07 2.62
2683 2787 6.374613 CCTAACAAGTCCCTATGGAAAGAAAC 59.625 42.308 0.00 0.00 44.07 2.78
2684 2788 5.319043 ACAAGTCCCTATGGAAAGAAACA 57.681 39.130 0.00 0.00 44.07 2.83
2685 2789 5.892348 ACAAGTCCCTATGGAAAGAAACAT 58.108 37.500 0.00 0.00 44.07 2.71
2686 2790 5.946377 ACAAGTCCCTATGGAAAGAAACATC 59.054 40.000 0.00 0.00 44.07 3.06
2687 2791 5.779241 AGTCCCTATGGAAAGAAACATCA 57.221 39.130 0.00 0.00 44.07 3.07
2688 2792 5.749462 AGTCCCTATGGAAAGAAACATCAG 58.251 41.667 0.00 0.00 44.07 2.90
2689 2793 4.884164 GTCCCTATGGAAAGAAACATCAGG 59.116 45.833 0.00 0.00 44.07 3.86
2690 2794 4.788075 TCCCTATGGAAAGAAACATCAGGA 59.212 41.667 0.00 0.00 37.86 3.86
2691 2795 5.433051 TCCCTATGGAAAGAAACATCAGGAT 59.567 40.000 0.00 0.00 37.86 3.24
2692 2796 5.767168 CCCTATGGAAAGAAACATCAGGATC 59.233 44.000 0.00 0.00 0.00 3.36
2693 2797 5.468072 CCTATGGAAAGAAACATCAGGATCG 59.532 44.000 0.00 0.00 0.00 3.69
2694 2798 3.609853 TGGAAAGAAACATCAGGATCGG 58.390 45.455 0.00 0.00 0.00 4.18
2695 2799 2.356069 GGAAAGAAACATCAGGATCGGC 59.644 50.000 0.00 0.00 0.00 5.54
2696 2800 3.274288 GAAAGAAACATCAGGATCGGCT 58.726 45.455 0.00 0.00 0.00 5.52
2697 2801 3.356529 AAGAAACATCAGGATCGGCTT 57.643 42.857 0.00 0.00 0.00 4.35
2698 2802 4.487714 AAGAAACATCAGGATCGGCTTA 57.512 40.909 0.00 0.00 0.00 3.09
2699 2803 4.487714 AGAAACATCAGGATCGGCTTAA 57.512 40.909 0.00 0.00 0.00 1.85
2700 2804 4.192317 AGAAACATCAGGATCGGCTTAAC 58.808 43.478 0.00 0.00 0.00 2.01
2701 2805 2.622064 ACATCAGGATCGGCTTAACC 57.378 50.000 0.00 0.00 0.00 2.85
2702 2806 2.119495 ACATCAGGATCGGCTTAACCT 58.881 47.619 0.00 0.00 35.61 3.50
2703 2807 3.305720 ACATCAGGATCGGCTTAACCTA 58.694 45.455 0.00 0.00 35.61 3.08
2704 2808 3.322254 ACATCAGGATCGGCTTAACCTAG 59.678 47.826 0.00 0.00 35.61 3.02
2705 2809 2.317040 TCAGGATCGGCTTAACCTAGG 58.683 52.381 7.41 7.41 35.61 3.02
2706 2810 2.091499 TCAGGATCGGCTTAACCTAGGA 60.091 50.000 17.98 0.00 35.61 2.94
2707 2811 2.900546 CAGGATCGGCTTAACCTAGGAT 59.099 50.000 17.98 6.20 35.61 3.24
2708 2812 3.056465 CAGGATCGGCTTAACCTAGGATC 60.056 52.174 17.98 4.99 34.01 3.36
2709 2813 3.166679 GGATCGGCTTAACCTAGGATCT 58.833 50.000 17.98 1.63 34.75 2.75
2710 2814 3.579151 GGATCGGCTTAACCTAGGATCTT 59.421 47.826 17.98 1.48 34.75 2.40
2711 2815 4.561105 GATCGGCTTAACCTAGGATCTTG 58.439 47.826 17.98 2.55 32.76 3.02
2712 2816 2.698797 TCGGCTTAACCTAGGATCTTGG 59.301 50.000 17.98 1.47 35.61 3.61
2713 2817 2.698797 CGGCTTAACCTAGGATCTTGGA 59.301 50.000 17.98 0.00 35.61 3.53
2714 2818 3.243907 CGGCTTAACCTAGGATCTTGGAG 60.244 52.174 17.98 3.93 35.61 3.86
2715 2819 3.967987 GGCTTAACCTAGGATCTTGGAGA 59.032 47.826 17.98 0.00 34.51 3.71
2716 2820 4.595350 GGCTTAACCTAGGATCTTGGAGAT 59.405 45.833 17.98 0.00 34.52 2.75
2717 2821 5.072464 GGCTTAACCTAGGATCTTGGAGATT 59.928 44.000 17.98 0.00 32.80 2.40
2718 2822 5.994668 GCTTAACCTAGGATCTTGGAGATTG 59.005 44.000 17.98 0.00 34.53 2.67
2719 2823 6.408662 GCTTAACCTAGGATCTTGGAGATTGT 60.409 42.308 17.98 0.00 34.53 2.71
2720 2824 7.510675 TTAACCTAGGATCTTGGAGATTGTT 57.489 36.000 17.98 0.00 34.53 2.83
2721 2825 8.618240 TTAACCTAGGATCTTGGAGATTGTTA 57.382 34.615 17.98 0.00 34.53 2.41
2722 2826 6.487299 ACCTAGGATCTTGGAGATTGTTAC 57.513 41.667 17.98 0.00 34.53 2.50
2723 2827 5.964477 ACCTAGGATCTTGGAGATTGTTACA 59.036 40.000 17.98 0.00 34.53 2.41
2724 2828 6.443849 ACCTAGGATCTTGGAGATTGTTACAA 59.556 38.462 17.98 0.00 34.53 2.41
2725 2829 7.037586 ACCTAGGATCTTGGAGATTGTTACAAA 60.038 37.037 17.98 0.00 34.53 2.83
2726 2830 7.281100 CCTAGGATCTTGGAGATTGTTACAAAC 59.719 40.741 1.05 0.00 34.53 2.93
2727 2831 6.784031 AGGATCTTGGAGATTGTTACAAACT 58.216 36.000 7.59 7.59 34.53 2.66
2728 2832 7.234355 AGGATCTTGGAGATTGTTACAAACTT 58.766 34.615 9.16 0.00 34.53 2.66
2729 2833 8.383175 AGGATCTTGGAGATTGTTACAAACTTA 58.617 33.333 9.16 0.25 34.53 2.24
2730 2834 9.178758 GGATCTTGGAGATTGTTACAAACTTAT 57.821 33.333 9.16 0.25 34.53 1.73
2731 2835 9.994432 GATCTTGGAGATTGTTACAAACTTATG 57.006 33.333 9.16 5.21 34.53 1.90
2732 2836 8.918202 TCTTGGAGATTGTTACAAACTTATGT 57.082 30.769 9.16 0.00 37.32 2.29
2733 2837 8.783093 TCTTGGAGATTGTTACAAACTTATGTG 58.217 33.333 9.16 1.19 34.75 3.21
2734 2838 8.458573 TTGGAGATTGTTACAAACTTATGTGT 57.541 30.769 9.16 0.00 34.75 3.72
2735 2839 9.562408 TTGGAGATTGTTACAAACTTATGTGTA 57.438 29.630 9.16 0.00 34.75 2.90
2736 2840 9.562408 TGGAGATTGTTACAAACTTATGTGTAA 57.438 29.630 9.16 0.00 37.77 2.41
2765 2869 9.726438 ATTCAATATAGTCCTAAGTATTGCACC 57.274 33.333 0.00 0.00 35.53 5.01
2766 2870 8.492415 TCAATATAGTCCTAAGTATTGCACCT 57.508 34.615 0.00 0.00 35.53 4.00
2767 2871 8.934697 TCAATATAGTCCTAAGTATTGCACCTT 58.065 33.333 0.00 0.00 35.53 3.50
2772 2876 7.923414 AGTCCTAAGTATTGCACCTTAAAAG 57.077 36.000 0.00 0.00 0.00 2.27
2781 2885 4.834911 CCTTAAAAGGGGTGGCGT 57.165 55.556 0.42 0.00 42.66 5.68
2782 2886 3.961582 CCTTAAAAGGGGTGGCGTA 57.038 52.632 0.42 0.00 42.66 4.42
2783 2887 2.203470 CCTTAAAAGGGGTGGCGTAA 57.797 50.000 0.42 0.00 42.66 3.18
2784 2888 2.089201 CCTTAAAAGGGGTGGCGTAAG 58.911 52.381 0.42 0.00 42.66 2.34
2785 2889 2.553685 CCTTAAAAGGGGTGGCGTAAGT 60.554 50.000 0.42 0.00 42.66 2.24
2786 2890 2.955342 TAAAAGGGGTGGCGTAAGTT 57.045 45.000 0.00 0.00 41.68 2.66
2787 2891 2.955342 AAAAGGGGTGGCGTAAGTTA 57.045 45.000 0.00 0.00 41.68 2.24
2788 2892 2.484742 AAAGGGGTGGCGTAAGTTAG 57.515 50.000 0.00 0.00 41.68 2.34
2789 2893 0.616891 AAGGGGTGGCGTAAGTTAGG 59.383 55.000 0.00 0.00 41.68 2.69
2790 2894 0.546027 AGGGGTGGCGTAAGTTAGGT 60.546 55.000 4.63 0.00 41.68 3.08
2791 2895 0.392060 GGGGTGGCGTAAGTTAGGTG 60.392 60.000 4.63 0.00 41.68 4.00
2792 2896 1.022982 GGGTGGCGTAAGTTAGGTGC 61.023 60.000 4.63 0.00 41.68 5.01
2793 2897 1.022982 GGTGGCGTAAGTTAGGTGCC 61.023 60.000 11.89 11.89 45.91 5.01
2794 2898 1.022982 GTGGCGTAAGTTAGGTGCCC 61.023 60.000 14.82 5.04 45.12 5.36
2795 2899 1.196104 TGGCGTAAGTTAGGTGCCCT 61.196 55.000 14.82 0.00 45.12 5.19
2796 2900 0.461516 GGCGTAAGTTAGGTGCCCTC 60.462 60.000 8.80 0.00 39.83 4.30
2797 2901 0.461516 GCGTAAGTTAGGTGCCCTCC 60.462 60.000 4.63 0.00 41.68 4.30
2798 2902 0.899720 CGTAAGTTAGGTGCCCTCCA 59.100 55.000 0.00 0.00 34.61 3.86
2799 2903 1.276989 CGTAAGTTAGGTGCCCTCCAA 59.723 52.381 0.00 0.00 34.61 3.53
2800 2904 2.289819 CGTAAGTTAGGTGCCCTCCAAA 60.290 50.000 0.00 0.00 34.61 3.28
2801 2905 3.758425 GTAAGTTAGGTGCCCTCCAAAA 58.242 45.455 0.00 0.00 34.61 2.44
2802 2906 3.322191 AAGTTAGGTGCCCTCCAAAAA 57.678 42.857 0.00 0.00 34.61 1.94
2803 2907 3.542969 AGTTAGGTGCCCTCCAAAAAT 57.457 42.857 0.00 0.00 34.61 1.82
2804 2908 3.431415 AGTTAGGTGCCCTCCAAAAATC 58.569 45.455 0.00 0.00 34.61 2.17
2805 2909 3.076032 AGTTAGGTGCCCTCCAAAAATCT 59.924 43.478 0.00 0.00 34.61 2.40
2806 2910 4.291249 AGTTAGGTGCCCTCCAAAAATCTA 59.709 41.667 0.00 0.00 34.61 1.98
2807 2911 3.825908 AGGTGCCCTCCAAAAATCTAA 57.174 42.857 0.00 0.00 0.00 2.10
2808 2912 3.701664 AGGTGCCCTCCAAAAATCTAAG 58.298 45.455 0.00 0.00 0.00 2.18
2809 2913 3.076032 AGGTGCCCTCCAAAAATCTAAGT 59.924 43.478 0.00 0.00 0.00 2.24
2810 2914 3.832490 GGTGCCCTCCAAAAATCTAAGTT 59.168 43.478 0.00 0.00 0.00 2.66
2811 2915 4.321974 GGTGCCCTCCAAAAATCTAAGTTG 60.322 45.833 0.00 0.00 0.00 3.16
2812 2916 4.522789 GTGCCCTCCAAAAATCTAAGTTGA 59.477 41.667 0.00 0.00 0.00 3.18
2813 2917 4.766891 TGCCCTCCAAAAATCTAAGTTGAG 59.233 41.667 0.00 0.00 0.00 3.02
2814 2918 5.010282 GCCCTCCAAAAATCTAAGTTGAGA 58.990 41.667 0.00 0.00 0.00 3.27
2815 2919 5.476945 GCCCTCCAAAAATCTAAGTTGAGAA 59.523 40.000 0.00 0.00 0.00 2.87
2816 2920 6.570571 GCCCTCCAAAAATCTAAGTTGAGAAC 60.571 42.308 0.00 0.00 0.00 3.01
2817 2921 6.071896 CCCTCCAAAAATCTAAGTTGAGAACC 60.072 42.308 0.00 0.00 0.00 3.62
2818 2922 6.490040 CCTCCAAAAATCTAAGTTGAGAACCA 59.510 38.462 0.00 0.00 0.00 3.67
2819 2923 7.177392 CCTCCAAAAATCTAAGTTGAGAACCAT 59.823 37.037 0.00 0.00 0.00 3.55
2820 2924 8.110860 TCCAAAAATCTAAGTTGAGAACCATC 57.889 34.615 0.00 0.00 0.00 3.51
2821 2925 7.944554 TCCAAAAATCTAAGTTGAGAACCATCT 59.055 33.333 0.00 0.00 39.10 2.90
2822 2926 8.579863 CCAAAAATCTAAGTTGAGAACCATCTT 58.420 33.333 0.00 0.00 38.15 2.40
2823 2927 9.971922 CAAAAATCTAAGTTGAGAACCATCTTT 57.028 29.630 0.00 0.00 36.50 2.52
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
132 133 1.255882 CTTGCAGGGTATTTGGTGCA 58.744 50.000 0.00 0.00 44.01 4.57
133 134 1.256812 ACTTGCAGGGTATTTGGTGC 58.743 50.000 0.00 0.00 36.42 5.01
164 165 4.524802 TTAGGAACGGAGGGAGTATGTA 57.475 45.455 0.00 0.00 0.00 2.29
170 171 6.494146 AGACTTATATTTAGGAACGGAGGGAG 59.506 42.308 0.00 0.00 0.00 4.30
171 172 6.379579 AGACTTATATTTAGGAACGGAGGGA 58.620 40.000 0.00 0.00 0.00 4.20
172 173 6.667558 AGACTTATATTTAGGAACGGAGGG 57.332 41.667 0.00 0.00 0.00 4.30
173 174 8.422566 AGAAAGACTTATATTTAGGAACGGAGG 58.577 37.037 0.00 0.00 0.00 4.30
190 191 8.772250 TCCATGGTGAAATATCTAGAAAGACTT 58.228 33.333 12.58 0.00 33.57 3.01
191 192 8.207545 GTCCATGGTGAAATATCTAGAAAGACT 58.792 37.037 12.58 0.00 33.57 3.24
192 193 8.207545 AGTCCATGGTGAAATATCTAGAAAGAC 58.792 37.037 12.58 0.00 33.57 3.01
193 194 8.324191 AGTCCATGGTGAAATATCTAGAAAGA 57.676 34.615 12.58 0.00 35.80 2.52
194 195 9.482627 GTAGTCCATGGTGAAATATCTAGAAAG 57.517 37.037 12.58 0.00 0.00 2.62
195 196 8.988060 TGTAGTCCATGGTGAAATATCTAGAAA 58.012 33.333 12.58 0.00 0.00 2.52
196 197 8.547481 TGTAGTCCATGGTGAAATATCTAGAA 57.453 34.615 12.58 0.00 0.00 2.10
197 198 8.727100 ATGTAGTCCATGGTGAAATATCTAGA 57.273 34.615 12.58 0.00 30.69 2.43
198 199 9.862371 GTATGTAGTCCATGGTGAAATATCTAG 57.138 37.037 12.58 0.00 34.86 2.43
199 200 8.520351 CGTATGTAGTCCATGGTGAAATATCTA 58.480 37.037 12.58 1.07 34.86 1.98
200 201 7.378966 CGTATGTAGTCCATGGTGAAATATCT 58.621 38.462 12.58 1.94 34.86 1.98
201 202 6.590292 CCGTATGTAGTCCATGGTGAAATATC 59.410 42.308 12.58 0.00 34.86 1.63
202 203 6.269077 TCCGTATGTAGTCCATGGTGAAATAT 59.731 38.462 12.58 3.78 34.86 1.28
203 204 5.599242 TCCGTATGTAGTCCATGGTGAAATA 59.401 40.000 12.58 0.63 34.86 1.40
204 205 4.407621 TCCGTATGTAGTCCATGGTGAAAT 59.592 41.667 12.58 1.61 34.86 2.17
205 206 3.770388 TCCGTATGTAGTCCATGGTGAAA 59.230 43.478 12.58 0.00 34.86 2.69
206 207 3.367321 TCCGTATGTAGTCCATGGTGAA 58.633 45.455 12.58 0.00 34.86 3.18
207 208 3.021177 TCCGTATGTAGTCCATGGTGA 57.979 47.619 12.58 0.00 34.86 4.02
208 209 3.069586 ACATCCGTATGTAGTCCATGGTG 59.930 47.826 12.58 0.00 44.66 4.17
209 210 3.305720 ACATCCGTATGTAGTCCATGGT 58.694 45.455 12.58 0.00 44.66 3.55
235 236 9.531158 AGTCAACCTACACTATAAACTAAGTCT 57.469 33.333 0.00 0.00 0.00 3.24
236 237 9.786105 GAGTCAACCTACACTATAAACTAAGTC 57.214 37.037 0.00 0.00 0.00 3.01
237 238 9.305555 TGAGTCAACCTACACTATAAACTAAGT 57.694 33.333 0.00 0.00 0.00 2.24
243 244 8.726988 GCAAAATGAGTCAACCTACACTATAAA 58.273 33.333 0.00 0.00 0.00 1.40
244 245 8.100791 AGCAAAATGAGTCAACCTACACTATAA 58.899 33.333 0.00 0.00 0.00 0.98
245 246 7.620880 AGCAAAATGAGTCAACCTACACTATA 58.379 34.615 0.00 0.00 0.00 1.31
246 247 6.476378 AGCAAAATGAGTCAACCTACACTAT 58.524 36.000 0.00 0.00 0.00 2.12
247 248 5.865085 AGCAAAATGAGTCAACCTACACTA 58.135 37.500 0.00 0.00 0.00 2.74
248 249 4.718961 AGCAAAATGAGTCAACCTACACT 58.281 39.130 0.00 0.00 0.00 3.55
249 250 4.757149 AGAGCAAAATGAGTCAACCTACAC 59.243 41.667 0.00 0.00 0.00 2.90
250 251 4.973168 AGAGCAAAATGAGTCAACCTACA 58.027 39.130 0.00 0.00 0.00 2.74
251 252 5.241662 AGAGAGCAAAATGAGTCAACCTAC 58.758 41.667 0.00 0.00 0.00 3.18
252 253 5.489792 AGAGAGCAAAATGAGTCAACCTA 57.510 39.130 0.00 0.00 0.00 3.08
253 254 4.363991 AGAGAGCAAAATGAGTCAACCT 57.636 40.909 0.00 0.00 0.00 3.50
254 255 5.448360 GCATAGAGAGCAAAATGAGTCAACC 60.448 44.000 0.00 0.00 0.00 3.77
255 256 5.122869 TGCATAGAGAGCAAAATGAGTCAAC 59.877 40.000 0.00 0.00 39.39 3.18
256 257 5.247862 TGCATAGAGAGCAAAATGAGTCAA 58.752 37.500 0.00 0.00 39.39 3.18
257 258 4.835678 TGCATAGAGAGCAAAATGAGTCA 58.164 39.130 0.00 0.00 39.39 3.41
258 259 4.874966 ACTGCATAGAGAGCAAAATGAGTC 59.125 41.667 0.00 0.00 42.17 3.36
259 260 4.841422 ACTGCATAGAGAGCAAAATGAGT 58.159 39.130 0.00 0.00 42.17 3.41
260 261 4.272991 GGACTGCATAGAGAGCAAAATGAG 59.727 45.833 0.00 0.00 42.17 2.90
261 262 4.194640 GGACTGCATAGAGAGCAAAATGA 58.805 43.478 0.00 0.00 42.17 2.57
262 263 3.314635 GGGACTGCATAGAGAGCAAAATG 59.685 47.826 0.00 0.00 42.17 2.32
263 264 3.201708 AGGGACTGCATAGAGAGCAAAAT 59.798 43.478 0.00 0.00 42.17 1.82
264 265 2.573462 AGGGACTGCATAGAGAGCAAAA 59.427 45.455 0.00 0.00 42.17 2.44
265 266 2.191400 AGGGACTGCATAGAGAGCAAA 58.809 47.619 0.00 0.00 42.17 3.68
266 267 1.871418 AGGGACTGCATAGAGAGCAA 58.129 50.000 0.00 0.00 42.17 3.91
267 268 1.871418 AAGGGACTGCATAGAGAGCA 58.129 50.000 0.00 0.00 40.86 4.26
268 269 4.039730 TCAATAAGGGACTGCATAGAGAGC 59.960 45.833 0.00 0.00 40.86 4.09
269 270 5.798125 TCAATAAGGGACTGCATAGAGAG 57.202 43.478 0.00 0.00 40.86 3.20
270 271 6.560003 TTTCAATAAGGGACTGCATAGAGA 57.440 37.500 0.00 0.00 40.86 3.10
271 272 7.222872 AGATTTCAATAAGGGACTGCATAGAG 58.777 38.462 0.00 0.00 40.86 2.43
272 273 7.141758 AGATTTCAATAAGGGACTGCATAGA 57.858 36.000 0.00 0.00 40.86 1.98
273 274 6.994496 TGAGATTTCAATAAGGGACTGCATAG 59.006 38.462 0.00 0.00 40.86 2.23
274 275 6.899089 TGAGATTTCAATAAGGGACTGCATA 58.101 36.000 0.00 0.00 40.86 3.14
275 276 5.759059 TGAGATTTCAATAAGGGACTGCAT 58.241 37.500 0.00 0.00 40.86 3.96
276 277 5.178096 TGAGATTTCAATAAGGGACTGCA 57.822 39.130 0.00 0.00 40.86 4.41
277 278 6.515272 TTTGAGATTTCAATAAGGGACTGC 57.485 37.500 0.00 0.00 42.60 4.40
300 301 9.462606 CCCTCTGTTCCTAAATATAAGTGTTTT 57.537 33.333 0.00 0.00 0.00 2.43
301 302 7.556635 GCCCTCTGTTCCTAAATATAAGTGTTT 59.443 37.037 0.00 0.00 0.00 2.83
302 303 7.054751 GCCCTCTGTTCCTAAATATAAGTGTT 58.945 38.462 0.00 0.00 0.00 3.32
303 304 6.157994 TGCCCTCTGTTCCTAAATATAAGTGT 59.842 38.462 0.00 0.00 0.00 3.55
304 305 6.483640 GTGCCCTCTGTTCCTAAATATAAGTG 59.516 42.308 0.00 0.00 0.00 3.16
305 306 6.592870 GTGCCCTCTGTTCCTAAATATAAGT 58.407 40.000 0.00 0.00 0.00 2.24
306 307 5.696724 CGTGCCCTCTGTTCCTAAATATAAG 59.303 44.000 0.00 0.00 0.00 1.73
307 308 5.454187 CCGTGCCCTCTGTTCCTAAATATAA 60.454 44.000 0.00 0.00 0.00 0.98
308 309 4.039973 CCGTGCCCTCTGTTCCTAAATATA 59.960 45.833 0.00 0.00 0.00 0.86
309 310 3.181454 CCGTGCCCTCTGTTCCTAAATAT 60.181 47.826 0.00 0.00 0.00 1.28
310 311 2.169769 CCGTGCCCTCTGTTCCTAAATA 59.830 50.000 0.00 0.00 0.00 1.40
311 312 1.065418 CCGTGCCCTCTGTTCCTAAAT 60.065 52.381 0.00 0.00 0.00 1.40
312 313 0.323629 CCGTGCCCTCTGTTCCTAAA 59.676 55.000 0.00 0.00 0.00 1.85
313 314 0.543410 TCCGTGCCCTCTGTTCCTAA 60.543 55.000 0.00 0.00 0.00 2.69
314 315 0.970937 CTCCGTGCCCTCTGTTCCTA 60.971 60.000 0.00 0.00 0.00 2.94
315 316 2.203788 TCCGTGCCCTCTGTTCCT 60.204 61.111 0.00 0.00 0.00 3.36
316 317 2.266055 CTCCGTGCCCTCTGTTCC 59.734 66.667 0.00 0.00 0.00 3.62
317 318 2.266055 CCTCCGTGCCCTCTGTTC 59.734 66.667 0.00 0.00 0.00 3.18
318 319 4.021925 GCCTCCGTGCCCTCTGTT 62.022 66.667 0.00 0.00 0.00 3.16
331 332 6.020389 AGACTTATATTTAGGAGAGGGCCTC 58.980 44.000 26.42 26.42 39.50 4.70
332 333 5.983608 AGACTTATATTTAGGAGAGGGCCT 58.016 41.667 5.25 5.25 42.15 5.19
333 334 6.689663 AAGACTTATATTTAGGAGAGGGCC 57.310 41.667 0.00 0.00 0.00 5.80
334 335 8.982091 AAAAAGACTTATATTTAGGAGAGGGC 57.018 34.615 0.00 0.00 0.00 5.19
355 356 9.753674 ACAGGTCCATATTGAAATCTCTAAAAA 57.246 29.630 0.00 0.00 0.00 1.94
356 357 9.177608 CACAGGTCCATATTGAAATCTCTAAAA 57.822 33.333 0.00 0.00 0.00 1.52
357 358 8.328758 ACACAGGTCCATATTGAAATCTCTAAA 58.671 33.333 0.00 0.00 0.00 1.85
358 359 7.861629 ACACAGGTCCATATTGAAATCTCTAA 58.138 34.615 0.00 0.00 0.00 2.10
359 360 7.437713 ACACAGGTCCATATTGAAATCTCTA 57.562 36.000 0.00 0.00 0.00 2.43
360 361 6.319048 ACACAGGTCCATATTGAAATCTCT 57.681 37.500 0.00 0.00 0.00 3.10
361 362 7.396540 AAACACAGGTCCATATTGAAATCTC 57.603 36.000 0.00 0.00 0.00 2.75
362 363 7.451255 TCAAAACACAGGTCCATATTGAAATCT 59.549 33.333 0.00 0.00 0.00 2.40
363 364 7.601856 TCAAAACACAGGTCCATATTGAAATC 58.398 34.615 0.00 0.00 0.00 2.17
364 365 7.537596 TCAAAACACAGGTCCATATTGAAAT 57.462 32.000 0.00 0.00 0.00 2.17
365 366 6.968263 TCAAAACACAGGTCCATATTGAAA 57.032 33.333 0.00 0.00 0.00 2.69
366 367 7.537596 AATCAAAACACAGGTCCATATTGAA 57.462 32.000 0.00 0.00 0.00 2.69
367 368 7.537596 AAATCAAAACACAGGTCCATATTGA 57.462 32.000 0.00 0.00 0.00 2.57
368 369 8.497554 CAAAAATCAAAACACAGGTCCATATTG 58.502 33.333 0.00 0.00 0.00 1.90
369 370 7.661027 CCAAAAATCAAAACACAGGTCCATATT 59.339 33.333 0.00 0.00 0.00 1.28
370 371 7.160726 CCAAAAATCAAAACACAGGTCCATAT 58.839 34.615 0.00 0.00 0.00 1.78
371 372 6.098982 ACCAAAAATCAAAACACAGGTCCATA 59.901 34.615 0.00 0.00 0.00 2.74
372 373 5.104569 ACCAAAAATCAAAACACAGGTCCAT 60.105 36.000 0.00 0.00 0.00 3.41
373 374 4.223923 ACCAAAAATCAAAACACAGGTCCA 59.776 37.500 0.00 0.00 0.00 4.02
374 375 4.765273 ACCAAAAATCAAAACACAGGTCC 58.235 39.130 0.00 0.00 0.00 4.46
375 376 6.370166 TCAAACCAAAAATCAAAACACAGGTC 59.630 34.615 0.00 0.00 0.00 3.85
376 377 6.234177 TCAAACCAAAAATCAAAACACAGGT 58.766 32.000 0.00 0.00 0.00 4.00
377 378 6.593382 TCTCAAACCAAAAATCAAAACACAGG 59.407 34.615 0.00 0.00 0.00 4.00
378 379 7.593875 TCTCAAACCAAAAATCAAAACACAG 57.406 32.000 0.00 0.00 0.00 3.66
379 380 8.558973 AATCTCAAACCAAAAATCAAAACACA 57.441 26.923 0.00 0.00 0.00 3.72
380 381 9.838975 AAAATCTCAAACCAAAAATCAAAACAC 57.161 25.926 0.00 0.00 0.00 3.32
421 422 3.924238 CGAAATTCGGCCATCTTGG 57.076 52.632 7.61 0.00 41.55 3.61
431 432 8.986039 AAATTTTTGAAAATGACCGAAATTCG 57.014 26.923 8.62 8.62 38.53 3.34
432 433 9.091255 CGAAATTTTTGAAAATGACCGAAATTC 57.909 29.630 2.71 0.94 38.53 2.17
433 434 8.067189 CCGAAATTTTTGAAAATGACCGAAATT 58.933 29.630 14.15 0.00 38.53 1.82
434 435 7.571892 CCGAAATTTTTGAAAATGACCGAAAT 58.428 30.769 14.15 0.00 38.53 2.17
435 436 6.510317 GCCGAAATTTTTGAAAATGACCGAAA 60.510 34.615 14.15 0.00 38.53 3.46
436 437 5.050702 GCCGAAATTTTTGAAAATGACCGAA 60.051 36.000 14.15 0.00 38.53 4.30
437 438 4.446051 GCCGAAATTTTTGAAAATGACCGA 59.554 37.500 14.15 0.00 38.53 4.69
438 439 4.376920 GGCCGAAATTTTTGAAAATGACCG 60.377 41.667 2.71 6.75 38.53 4.79
439 440 4.513318 TGGCCGAAATTTTTGAAAATGACC 59.487 37.500 0.00 2.34 38.53 4.02
440 441 5.665381 TGGCCGAAATTTTTGAAAATGAC 57.335 34.783 0.00 0.81 38.53 3.06
441 442 6.683974 TTTGGCCGAAATTTTTGAAAATGA 57.316 29.167 1.75 0.00 38.53 2.57
442 443 7.927305 ATTTTGGCCGAAATTTTTGAAAATG 57.073 28.000 23.22 0.00 38.53 2.32
443 444 8.939201 AAATTTTGGCCGAAATTTTTGAAAAT 57.061 23.077 35.89 20.62 43.17 1.82
459 460 5.906838 GTCAAATTTCGGTCAAAATTTTGGC 59.093 36.000 26.45 25.34 43.05 4.52
460 461 7.245419 AGTCAAATTTCGGTCAAAATTTTGG 57.755 32.000 26.45 13.59 43.05 3.28
503 504 6.604735 AAATCTATCTTCGACCGAAATTGG 57.395 37.500 6.32 0.00 33.34 3.16
504 505 6.412072 GCAAAATCTATCTTCGACCGAAATTG 59.588 38.462 6.32 4.97 33.34 2.32
505 506 6.458342 GGCAAAATCTATCTTCGACCGAAATT 60.458 38.462 6.32 0.63 33.34 1.82
506 507 5.007724 GGCAAAATCTATCTTCGACCGAAAT 59.992 40.000 6.32 5.90 33.34 2.17
507 508 4.331717 GGCAAAATCTATCTTCGACCGAAA 59.668 41.667 6.32 0.00 33.34 3.46
508 509 3.869246 GGCAAAATCTATCTTCGACCGAA 59.131 43.478 4.72 4.72 0.00 4.30
509 510 3.454375 GGCAAAATCTATCTTCGACCGA 58.546 45.455 0.00 0.00 0.00 4.69
510 511 2.544267 GGGCAAAATCTATCTTCGACCG 59.456 50.000 0.00 0.00 0.00 4.79
511 512 2.879026 GGGGCAAAATCTATCTTCGACC 59.121 50.000 0.00 0.00 0.00 4.79
512 513 3.541632 TGGGGCAAAATCTATCTTCGAC 58.458 45.455 0.00 0.00 0.00 4.20
513 514 3.433598 CCTGGGGCAAAATCTATCTTCGA 60.434 47.826 0.00 0.00 0.00 3.71
514 515 2.880890 CCTGGGGCAAAATCTATCTTCG 59.119 50.000 0.00 0.00 0.00 3.79
536 537 1.934463 CGAATTTCGGCCATCTCGG 59.066 57.895 10.95 0.00 36.00 4.63
546 547 2.535934 TGAATTTCGGCCGAATTTCG 57.464 45.000 41.19 17.36 42.55 3.46
547 548 5.778161 ATTTTGAATTTCGGCCGAATTTC 57.222 34.783 41.52 41.52 41.25 2.17
548 549 6.159988 TGTATTTTGAATTTCGGCCGAATTT 58.840 32.000 38.89 37.01 33.79 1.82
549 550 5.715070 TGTATTTTGAATTTCGGCCGAATT 58.285 33.333 38.89 31.79 33.79 2.17
550 551 5.124776 TCTGTATTTTGAATTTCGGCCGAAT 59.875 36.000 38.89 26.73 33.79 3.34
551 552 4.456222 TCTGTATTTTGAATTTCGGCCGAA 59.544 37.500 35.81 35.81 0.00 4.30
552 553 4.004314 TCTGTATTTTGAATTTCGGCCGA 58.996 39.130 27.28 27.28 0.00 5.54
553 554 4.349663 TCTGTATTTTGAATTTCGGCCG 57.650 40.909 22.12 22.12 0.00 6.13
554 555 6.863126 CCATATCTGTATTTTGAATTTCGGCC 59.137 38.462 0.00 0.00 0.00 6.13
555 556 7.591426 GTCCATATCTGTATTTTGAATTTCGGC 59.409 37.037 0.00 0.00 0.00 5.54
556 557 8.840321 AGTCCATATCTGTATTTTGAATTTCGG 58.160 33.333 0.00 0.00 0.00 4.30
563 564 9.908152 CGTATGTAGTCCATATCTGTATTTTGA 57.092 33.333 0.00 0.00 38.29 2.69
564 565 9.140286 CCGTATGTAGTCCATATCTGTATTTTG 57.860 37.037 0.00 0.00 38.29 2.44
565 566 9.085645 TCCGTATGTAGTCCATATCTGTATTTT 57.914 33.333 0.00 0.00 38.29 1.82
566 567 8.521176 GTCCGTATGTAGTCCATATCTGTATTT 58.479 37.037 0.00 0.00 38.29 1.40
567 568 7.668469 TGTCCGTATGTAGTCCATATCTGTATT 59.332 37.037 0.00 0.00 38.29 1.89
568 569 7.173032 TGTCCGTATGTAGTCCATATCTGTAT 58.827 38.462 0.00 0.00 38.29 2.29
569 570 6.536447 TGTCCGTATGTAGTCCATATCTGTA 58.464 40.000 0.00 0.00 38.29 2.74
570 571 5.382616 TGTCCGTATGTAGTCCATATCTGT 58.617 41.667 0.00 0.00 38.29 3.41
571 572 5.959618 TGTCCGTATGTAGTCCATATCTG 57.040 43.478 0.00 0.00 38.29 2.90
577 578 8.453320 CGTTTATATATGTCCGTATGTAGTCCA 58.547 37.037 0.00 0.00 0.00 4.02
578 579 8.454106 ACGTTTATATATGTCCGTATGTAGTCC 58.546 37.037 0.00 0.00 0.00 3.85
597 598 8.796475 TGAACCTACACTCTAAACTACGTTTAT 58.204 33.333 0.00 0.00 37.37 1.40
598 599 8.076178 GTGAACCTACACTCTAAACTACGTTTA 58.924 37.037 0.00 0.01 36.29 2.01
599 600 6.920210 GTGAACCTACACTCTAAACTACGTTT 59.080 38.462 0.00 0.00 37.38 3.60
600 601 6.264067 AGTGAACCTACACTCTAAACTACGTT 59.736 38.462 0.00 0.00 46.36 3.99
601 602 5.767168 AGTGAACCTACACTCTAAACTACGT 59.233 40.000 0.00 0.00 46.36 3.57
602 603 6.251655 AGTGAACCTACACTCTAAACTACG 57.748 41.667 0.00 0.00 46.36 3.51
613 614 4.083271 GGAGCAAAATGAGTGAACCTACAC 60.083 45.833 0.00 0.00 40.60 2.90
614 615 4.072131 GGAGCAAAATGAGTGAACCTACA 58.928 43.478 0.00 0.00 0.00 2.74
615 616 4.072131 TGGAGCAAAATGAGTGAACCTAC 58.928 43.478 0.00 0.00 0.00 3.18
616 617 4.365514 TGGAGCAAAATGAGTGAACCTA 57.634 40.909 0.00 0.00 0.00 3.08
617 618 3.228188 TGGAGCAAAATGAGTGAACCT 57.772 42.857 0.00 0.00 0.00 3.50
618 619 5.126061 ACATATGGAGCAAAATGAGTGAACC 59.874 40.000 7.80 0.00 0.00 3.62
619 620 6.199937 ACATATGGAGCAAAATGAGTGAAC 57.800 37.500 7.80 0.00 0.00 3.18
620 621 7.112122 ACTACATATGGAGCAAAATGAGTGAA 58.888 34.615 15.30 0.00 0.00 3.18
621 622 6.653020 ACTACATATGGAGCAAAATGAGTGA 58.347 36.000 15.30 0.00 0.00 3.41
622 623 6.932356 ACTACATATGGAGCAAAATGAGTG 57.068 37.500 15.30 0.00 0.00 3.51
623 624 7.112122 TGAACTACATATGGAGCAAAATGAGT 58.888 34.615 15.30 0.00 0.00 3.41
624 625 7.558161 TGAACTACATATGGAGCAAAATGAG 57.442 36.000 15.30 0.00 0.00 2.90
625 626 9.797642 ATATGAACTACATATGGAGCAAAATGA 57.202 29.630 15.30 0.00 46.54 2.57
662 663 9.178758 CCTCTGCTCCTAAATATAAGTGTTTTT 57.821 33.333 0.00 0.00 0.00 1.94
663 664 7.775561 CCCTCTGCTCCTAAATATAAGTGTTTT 59.224 37.037 0.00 0.00 0.00 2.43
664 665 7.127339 TCCCTCTGCTCCTAAATATAAGTGTTT 59.873 37.037 0.00 0.00 0.00 2.83
665 666 6.615726 TCCCTCTGCTCCTAAATATAAGTGTT 59.384 38.462 0.00 0.00 0.00 3.32
666 667 6.143915 TCCCTCTGCTCCTAAATATAAGTGT 58.856 40.000 0.00 0.00 0.00 3.55
667 668 6.268847 ACTCCCTCTGCTCCTAAATATAAGTG 59.731 42.308 0.00 0.00 0.00 3.16
668 669 6.386284 ACTCCCTCTGCTCCTAAATATAAGT 58.614 40.000 0.00 0.00 0.00 2.24
669 670 6.926630 ACTCCCTCTGCTCCTAAATATAAG 57.073 41.667 0.00 0.00 0.00 1.73
671 672 9.647918 CATATACTCCCTCTGCTCCTAAATATA 57.352 37.037 0.00 0.00 0.00 0.86
672 673 8.347591 TCATATACTCCCTCTGCTCCTAAATAT 58.652 37.037 0.00 0.00 0.00 1.28
673 674 7.616150 GTCATATACTCCCTCTGCTCCTAAATA 59.384 40.741 0.00 0.00 0.00 1.40
674 675 6.439058 GTCATATACTCCCTCTGCTCCTAAAT 59.561 42.308 0.00 0.00 0.00 1.40
675 676 5.775701 GTCATATACTCCCTCTGCTCCTAAA 59.224 44.000 0.00 0.00 0.00 1.85
676 677 5.162980 TGTCATATACTCCCTCTGCTCCTAA 60.163 44.000 0.00 0.00 0.00 2.69
677 678 4.354087 TGTCATATACTCCCTCTGCTCCTA 59.646 45.833 0.00 0.00 0.00 2.94
678 679 3.141083 TGTCATATACTCCCTCTGCTCCT 59.859 47.826 0.00 0.00 0.00 3.69
679 680 3.501349 TGTCATATACTCCCTCTGCTCC 58.499 50.000 0.00 0.00 0.00 4.70
680 681 4.769488 TCATGTCATATACTCCCTCTGCTC 59.231 45.833 0.00 0.00 0.00 4.26
681 682 4.745351 TCATGTCATATACTCCCTCTGCT 58.255 43.478 0.00 0.00 0.00 4.24
682 683 4.620332 GCTCATGTCATATACTCCCTCTGC 60.620 50.000 0.00 0.00 0.00 4.26
683 684 4.525874 TGCTCATGTCATATACTCCCTCTG 59.474 45.833 0.00 0.00 0.00 3.35
684 685 4.526262 GTGCTCATGTCATATACTCCCTCT 59.474 45.833 0.00 0.00 0.00 3.69
685 686 4.281941 TGTGCTCATGTCATATACTCCCTC 59.718 45.833 0.00 0.00 0.00 4.30
686 687 4.226384 TGTGCTCATGTCATATACTCCCT 58.774 43.478 0.00 0.00 0.00 4.20
687 688 4.607293 TGTGCTCATGTCATATACTCCC 57.393 45.455 0.00 0.00 0.00 4.30
688 689 5.050769 CGTTTGTGCTCATGTCATATACTCC 60.051 44.000 0.00 0.00 0.00 3.85
689 690 5.520288 ACGTTTGTGCTCATGTCATATACTC 59.480 40.000 0.00 0.00 0.00 2.59
690 691 5.291858 CACGTTTGTGCTCATGTCATATACT 59.708 40.000 0.00 0.00 39.67 2.12
691 692 5.492854 CACGTTTGTGCTCATGTCATATAC 58.507 41.667 0.00 0.00 39.67 1.47
692 693 5.717038 CACGTTTGTGCTCATGTCATATA 57.283 39.130 0.00 0.00 39.67 0.86
693 694 4.604843 CACGTTTGTGCTCATGTCATAT 57.395 40.909 0.00 0.00 39.67 1.78
717 718 6.833041 TGTTTCCTAAGTTTCACAGGTGATA 58.167 36.000 2.52 0.00 39.64 2.15
727 728 4.023536 TGCCATCGTTGTTTCCTAAGTTTC 60.024 41.667 0.00 0.00 0.00 2.78
777 778 1.848652 TGTAGCCTGTAGGGACACTC 58.151 55.000 0.00 0.00 37.23 3.51
797 806 4.640771 ATCCAGTGTTACAGTTCATGGT 57.359 40.909 0.00 0.00 0.00 3.55
801 810 9.952030 TGATTATAAATCCAGTGTTACAGTTCA 57.048 29.630 0.00 0.00 0.00 3.18
809 818 9.685276 TTGAGACATGATTATAAATCCAGTGTT 57.315 29.630 0.00 0.00 0.00 3.32
810 819 9.113838 GTTGAGACATGATTATAAATCCAGTGT 57.886 33.333 0.00 1.08 0.00 3.55
811 820 8.562892 GGTTGAGACATGATTATAAATCCAGTG 58.437 37.037 0.00 0.00 0.00 3.66
812 821 8.274322 TGGTTGAGACATGATTATAAATCCAGT 58.726 33.333 0.00 0.00 0.00 4.00
813 822 8.681486 TGGTTGAGACATGATTATAAATCCAG 57.319 34.615 0.00 0.00 0.00 3.86
865 889 1.597663 CCATCGCTATCGTTGTTTCCC 59.402 52.381 0.00 0.00 34.54 3.97
912 936 5.467063 GTGATTATTTGTAGGAGGCTGTAGC 59.533 44.000 0.00 0.00 41.14 3.58
959 996 0.764890 TTGTGTGAAGGGTGGAGGAG 59.235 55.000 0.00 0.00 0.00 3.69
991 1028 2.052891 CGACGACACCATTTTCACGTA 58.947 47.619 0.00 0.00 34.26 3.57
992 1029 0.856641 CGACGACACCATTTTCACGT 59.143 50.000 0.00 0.00 36.71 4.49
993 1030 0.856641 ACGACGACACCATTTTCACG 59.143 50.000 0.00 0.00 0.00 4.35
1039 1079 2.044551 GAGGGCAAGGAAGGGCAG 60.045 66.667 0.00 0.00 0.00 4.85
1103 1143 1.512926 GTTGAGGAGCGACACATTGT 58.487 50.000 0.00 0.00 0.00 2.71
1109 1149 3.611674 TGCCGTTGAGGAGCGACA 61.612 61.111 0.00 0.00 45.00 4.35
1143 1183 4.581105 TCGATAGCGAAGAGGCCT 57.419 55.556 3.86 3.86 44.78 5.19
1156 1196 3.000819 TGGGTTGGCGGAGTCGAT 61.001 61.111 0.00 0.00 39.00 3.59
1157 1197 3.691342 CTGGGTTGGCGGAGTCGA 61.691 66.667 0.00 0.00 39.00 4.20
1318 1358 6.038997 TGAGGATCAATCATGATGAGCTAG 57.961 41.667 9.46 0.00 45.97 3.42
1350 1404 7.266922 TGACATGAGCACTAACGTGTATATA 57.733 36.000 0.00 0.00 43.16 0.86
1351 1405 6.144078 TGACATGAGCACTAACGTGTATAT 57.856 37.500 0.00 0.00 43.16 0.86
1352 1406 5.570234 TGACATGAGCACTAACGTGTATA 57.430 39.130 0.00 0.00 43.16 1.47
1353 1407 4.450082 TGACATGAGCACTAACGTGTAT 57.550 40.909 0.00 0.00 43.16 2.29
1354 1408 3.926821 TGACATGAGCACTAACGTGTA 57.073 42.857 0.00 0.00 43.16 2.90
1355 1409 2.812358 TGACATGAGCACTAACGTGT 57.188 45.000 0.00 0.00 43.16 4.49
1356 1410 6.642540 ACATATATGACATGAGCACTAACGTG 59.357 38.462 19.63 0.00 44.07 4.49
1362 1416 5.224821 AGCACATATATGACATGAGCACT 57.775 39.130 19.63 0.00 40.93 4.40
1376 1430 6.238953 GCAATCATGGAAGAAGAAGCACATAT 60.239 38.462 0.00 0.00 0.00 1.78
1377 1431 5.066893 GCAATCATGGAAGAAGAAGCACATA 59.933 40.000 0.00 0.00 0.00 2.29
1423 1477 0.320771 CCACCACGTAAAGCAGCTCT 60.321 55.000 0.00 0.00 0.00 4.09
1442 1496 4.767255 CACCAGCAGCGGACCCTC 62.767 72.222 9.87 0.00 0.00 4.30
1558 1612 2.267642 GCCACATGGTCGCCACTA 59.732 61.111 0.00 0.00 35.80 2.74
1658 1712 2.688794 GCGACTTCTCGAGGACGGT 61.689 63.158 13.56 0.00 43.06 4.83
1768 1822 1.614317 GCTGCACCACCATTCTTAGGT 60.614 52.381 0.00 0.00 40.85 3.08
1831 1885 3.192212 TCACAAGTCACAACAACAATGCA 59.808 39.130 0.00 0.00 0.00 3.96
1841 1895 4.154015 CAGTCACAACTTCACAAGTCACAA 59.846 41.667 0.00 0.00 41.91 3.33
2328 2385 8.918202 ATTAAACACCTATTTCTTGAGTGTGA 57.082 30.769 0.00 0.00 40.63 3.58
2358 2419 6.710295 TGTTGTGTCTTTTACTAGCATGATGT 59.290 34.615 0.00 0.00 0.00 3.06
2367 2428 7.156673 GGGAGTATGTGTTGTGTCTTTTACTA 58.843 38.462 0.00 0.00 0.00 1.82
2385 2454 4.412199 TCATCGAAATTGGAAGGGGAGTAT 59.588 41.667 0.00 0.00 0.00 2.12
2408 2477 3.898123 TCTTGACTAGAGACAACCTTGCT 59.102 43.478 0.00 0.00 0.00 3.91
2453 2556 5.039645 TCTCTTGGGGTTATCATCTTCCTT 58.960 41.667 0.00 0.00 0.00 3.36
2462 2565 8.926092 AGCTTAAATTATCTCTTGGGGTTATC 57.074 34.615 0.00 0.00 0.00 1.75
2463 2566 9.355916 GAAGCTTAAATTATCTCTTGGGGTTAT 57.644 33.333 0.00 0.00 0.00 1.89
2550 2653 5.245531 TCGCACCAGAATAGAAAGTTCATT 58.754 37.500 0.00 0.00 0.00 2.57
2551 2654 4.832248 TCGCACCAGAATAGAAAGTTCAT 58.168 39.130 0.00 0.00 0.00 2.57
2572 2675 5.869888 AGTCGGACAAATTTAGATGACACTC 59.130 40.000 11.27 0.00 0.00 3.51
2592 2695 2.669924 CCATCAGTTGTCATGTGAGTCG 59.330 50.000 0.00 0.00 0.00 4.18
2600 2703 2.865119 TGCAGTCCATCAGTTGTCAT 57.135 45.000 0.00 0.00 0.00 3.06
2640 2744 1.451028 GGTCTGGCCTCACAGCATC 60.451 63.158 3.32 0.00 38.36 3.91
2647 2751 0.984230 CTTGTTAGGGTCTGGCCTCA 59.016 55.000 3.32 0.00 37.43 3.86
2660 2764 6.843752 TGTTTCTTTCCATAGGGACTTGTTA 58.156 36.000 0.00 0.00 44.89 2.41
2662 2766 5.319043 TGTTTCTTTCCATAGGGACTTGT 57.681 39.130 0.00 0.00 44.89 3.16
2663 2767 5.945784 TGATGTTTCTTTCCATAGGGACTTG 59.054 40.000 0.00 0.00 44.89 3.16
2673 2777 3.609853 CCGATCCTGATGTTTCTTTCCA 58.390 45.455 0.00 0.00 0.00 3.53
2679 2783 3.312697 GGTTAAGCCGATCCTGATGTTTC 59.687 47.826 0.00 0.00 0.00 2.78
2683 2787 2.918712 AGGTTAAGCCGATCCTGATG 57.081 50.000 0.00 0.00 43.70 3.07
2684 2788 2.900546 CCTAGGTTAAGCCGATCCTGAT 59.099 50.000 0.00 0.00 43.70 2.90
2685 2789 2.091499 TCCTAGGTTAAGCCGATCCTGA 60.091 50.000 9.08 0.00 43.70 3.86
2686 2790 2.317040 TCCTAGGTTAAGCCGATCCTG 58.683 52.381 9.08 0.00 43.70 3.86
2687 2791 2.769602 TCCTAGGTTAAGCCGATCCT 57.230 50.000 9.08 0.00 43.70 3.24
2688 2792 3.166679 AGATCCTAGGTTAAGCCGATCC 58.833 50.000 9.08 0.00 43.70 3.36
2689 2793 4.561105 CAAGATCCTAGGTTAAGCCGATC 58.439 47.826 9.08 14.53 43.70 3.69
2690 2794 3.325135 CCAAGATCCTAGGTTAAGCCGAT 59.675 47.826 9.08 0.30 43.70 4.18
2691 2795 2.698797 CCAAGATCCTAGGTTAAGCCGA 59.301 50.000 9.08 0.00 43.70 5.54
2692 2796 2.698797 TCCAAGATCCTAGGTTAAGCCG 59.301 50.000 9.08 0.00 43.70 5.52
2693 2797 3.967987 TCTCCAAGATCCTAGGTTAAGCC 59.032 47.826 9.08 0.00 37.58 4.35
2694 2798 5.816955 ATCTCCAAGATCCTAGGTTAAGC 57.183 43.478 9.08 0.00 25.75 3.09
2695 2799 7.130681 ACAATCTCCAAGATCCTAGGTTAAG 57.869 40.000 9.08 0.00 32.89 1.85
2696 2800 7.510675 AACAATCTCCAAGATCCTAGGTTAA 57.489 36.000 9.08 0.00 32.89 2.01
2697 2801 7.622081 TGTAACAATCTCCAAGATCCTAGGTTA 59.378 37.037 9.08 0.00 32.89 2.85
2698 2802 6.443849 TGTAACAATCTCCAAGATCCTAGGTT 59.556 38.462 9.08 0.00 32.89 3.50
2699 2803 5.964477 TGTAACAATCTCCAAGATCCTAGGT 59.036 40.000 9.08 0.00 32.89 3.08
2700 2804 6.485830 TGTAACAATCTCCAAGATCCTAGG 57.514 41.667 0.82 0.82 32.89 3.02
2701 2805 8.043710 AGTTTGTAACAATCTCCAAGATCCTAG 58.956 37.037 0.00 0.00 32.89 3.02
2702 2806 7.918076 AGTTTGTAACAATCTCCAAGATCCTA 58.082 34.615 0.00 0.00 32.89 2.94
2703 2807 6.784031 AGTTTGTAACAATCTCCAAGATCCT 58.216 36.000 0.00 0.00 32.89 3.24
2704 2808 7.454260 AAGTTTGTAACAATCTCCAAGATCC 57.546 36.000 0.00 0.00 32.89 3.36
2705 2809 9.994432 CATAAGTTTGTAACAATCTCCAAGATC 57.006 33.333 0.00 0.00 32.89 2.75
2706 2810 9.520515 ACATAAGTTTGTAACAATCTCCAAGAT 57.479 29.630 0.00 0.00 36.28 2.40
2707 2811 8.783093 CACATAAGTTTGTAACAATCTCCAAGA 58.217 33.333 0.00 0.00 0.00 3.02
2708 2812 8.567948 ACACATAAGTTTGTAACAATCTCCAAG 58.432 33.333 0.00 0.00 0.00 3.61
2709 2813 8.458573 ACACATAAGTTTGTAACAATCTCCAA 57.541 30.769 0.00 0.00 0.00 3.53
2710 2814 9.562408 TTACACATAAGTTTGTAACAATCTCCA 57.438 29.630 0.00 0.00 34.09 3.86
2739 2843 9.726438 GGTGCAATACTTAGGACTATATTGAAT 57.274 33.333 13.14 0.00 37.25 2.57
2740 2844 8.934697 AGGTGCAATACTTAGGACTATATTGAA 58.065 33.333 13.14 4.16 37.25 2.69
2741 2845 8.492415 AGGTGCAATACTTAGGACTATATTGA 57.508 34.615 13.14 1.79 37.25 2.57
2746 2850 9.614792 CTTTTAAGGTGCAATACTTAGGACTAT 57.385 33.333 0.00 0.00 31.48 2.12
2747 2851 8.044908 CCTTTTAAGGTGCAATACTTAGGACTA 58.955 37.037 0.15 0.00 41.41 2.59
2748 2852 6.884836 CCTTTTAAGGTGCAATACTTAGGACT 59.115 38.462 0.15 0.00 41.41 3.85
2749 2853 6.095021 CCCTTTTAAGGTGCAATACTTAGGAC 59.905 42.308 7.69 0.00 44.98 3.85
2750 2854 6.184789 CCCTTTTAAGGTGCAATACTTAGGA 58.815 40.000 7.69 3.64 44.98 2.94
2751 2855 5.359860 CCCCTTTTAAGGTGCAATACTTAGG 59.640 44.000 7.69 0.00 44.98 2.69
2752 2856 5.949952 ACCCCTTTTAAGGTGCAATACTTAG 59.050 40.000 7.69 0.00 44.98 2.18
2753 2857 5.712917 CACCCCTTTTAAGGTGCAATACTTA 59.287 40.000 7.69 0.00 46.55 2.24
2754 2858 4.526650 CACCCCTTTTAAGGTGCAATACTT 59.473 41.667 7.69 0.00 46.55 2.24
2755 2859 4.086457 CACCCCTTTTAAGGTGCAATACT 58.914 43.478 7.69 0.00 46.55 2.12
2756 2860 4.450082 CACCCCTTTTAAGGTGCAATAC 57.550 45.455 7.69 0.00 46.55 1.89
2763 2867 1.066471 TACGCCACCCCTTTTAAGGT 58.934 50.000 7.69 0.00 44.98 3.50
2764 2868 2.089201 CTTACGCCACCCCTTTTAAGG 58.911 52.381 1.35 1.35 46.06 2.69
2765 2869 2.786777 ACTTACGCCACCCCTTTTAAG 58.213 47.619 0.00 0.00 0.00 1.85
2766 2870 2.955342 ACTTACGCCACCCCTTTTAA 57.045 45.000 0.00 0.00 0.00 1.52
2767 2871 2.955342 AACTTACGCCACCCCTTTTA 57.045 45.000 0.00 0.00 0.00 1.52
2768 2872 2.553685 CCTAACTTACGCCACCCCTTTT 60.554 50.000 0.00 0.00 0.00 2.27
2769 2873 1.003928 CCTAACTTACGCCACCCCTTT 59.996 52.381 0.00 0.00 0.00 3.11
2770 2874 0.616891 CCTAACTTACGCCACCCCTT 59.383 55.000 0.00 0.00 0.00 3.95
2771 2875 0.546027 ACCTAACTTACGCCACCCCT 60.546 55.000 0.00 0.00 0.00 4.79
2772 2876 0.392060 CACCTAACTTACGCCACCCC 60.392 60.000 0.00 0.00 0.00 4.95
2773 2877 1.022982 GCACCTAACTTACGCCACCC 61.023 60.000 0.00 0.00 0.00 4.61
2774 2878 1.022982 GGCACCTAACTTACGCCACC 61.023 60.000 0.00 0.00 42.50 4.61
2775 2879 2.463592 GGCACCTAACTTACGCCAC 58.536 57.895 0.00 0.00 42.50 5.01
2789 2893 4.522789 TCAACTTAGATTTTTGGAGGGCAC 59.477 41.667 0.00 0.00 0.00 5.01
2790 2894 4.735369 TCAACTTAGATTTTTGGAGGGCA 58.265 39.130 0.00 0.00 0.00 5.36
2791 2895 5.010282 TCTCAACTTAGATTTTTGGAGGGC 58.990 41.667 0.00 0.00 0.00 5.19
2792 2896 6.071896 GGTTCTCAACTTAGATTTTTGGAGGG 60.072 42.308 0.00 0.00 0.00 4.30
2793 2897 6.490040 TGGTTCTCAACTTAGATTTTTGGAGG 59.510 38.462 0.00 0.00 0.00 4.30
2794 2898 7.510549 TGGTTCTCAACTTAGATTTTTGGAG 57.489 36.000 0.00 0.00 0.00 3.86
2795 2899 7.944554 AGATGGTTCTCAACTTAGATTTTTGGA 59.055 33.333 0.00 0.00 0.00 3.53
2796 2900 8.115490 AGATGGTTCTCAACTTAGATTTTTGG 57.885 34.615 0.00 0.00 0.00 3.28
2797 2901 9.971922 AAAGATGGTTCTCAACTTAGATTTTTG 57.028 29.630 0.00 0.00 37.48 2.44


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.