Multiple sequence alignment - TraesCS4B01G008000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G008000 chr4B 100.000 3548 0 0 1 3548 5358440 5361987 0.000000e+00 6553.0
1 TraesCS4B01G008000 chr4B 100.000 2592 0 0 3943 6534 5362382 5364973 0.000000e+00 4787.0
2 TraesCS4B01G008000 chr4B 85.686 1523 186 17 2042 3548 5406977 5408483 0.000000e+00 1576.0
3 TraesCS4B01G008000 chr4B 85.800 1000 110 17 4598 5591 5409103 5410076 0.000000e+00 1031.0
4 TraesCS4B01G008000 chr4B 88.697 522 55 2 3943 4460 5408534 5409055 9.240000e-178 634.0
5 TraesCS4B01G008000 chr4B 84.746 472 64 8 1437 1906 5406286 5406751 3.570000e-127 466.0
6 TraesCS4B01G008000 chr4B 92.233 206 15 1 6329 6534 35911091 35910887 2.300000e-74 291.0
7 TraesCS4B01G008000 chr4B 82.645 121 13 7 766 880 5405561 5405679 4.170000e-17 100.0
8 TraesCS4B01G008000 chr4A 96.253 2375 68 8 1185 3548 601033042 601035406 0.000000e+00 3873.0
9 TraesCS4B01G008000 chr4A 96.491 1653 52 5 3943 5591 601035456 601037106 0.000000e+00 2726.0
10 TraesCS4B01G008000 chr4A 90.369 488 44 3 5850 6336 601037441 601037926 7.150000e-179 638.0
11 TraesCS4B01G008000 chr4A 95.971 273 10 1 245 517 601031597 601031868 6.010000e-120 442.0
12 TraesCS4B01G008000 chr4A 93.561 264 15 1 5583 5844 601037135 601037398 6.140000e-105 392.0
13 TraesCS4B01G008000 chr4A 88.037 326 17 11 503 826 601032294 601032599 3.720000e-97 366.0
14 TraesCS4B01G008000 chr4A 91.473 258 10 2 854 1109 601032793 601033040 1.740000e-90 344.0
15 TraesCS4B01G008000 chr4A 84.810 237 11 8 1 237 601030864 601031075 1.430000e-51 215.0
16 TraesCS4B01G008000 chr4A 100.000 32 0 0 629 660 601032468 601032499 7.080000e-05 60.2
17 TraesCS4B01G008000 chr3A 83.582 1005 147 11 4598 5591 50904527 50903530 0.000000e+00 926.0
18 TraesCS4B01G008000 chr3A 79.868 1366 191 44 2248 3548 50906560 50905214 0.000000e+00 922.0
19 TraesCS4B01G008000 chr3A 83.660 306 48 2 1447 1750 50907258 50906953 2.980000e-73 287.0
20 TraesCS4B01G008000 chr3A 91.304 207 16 2 6328 6534 94095851 94095647 1.390000e-71 281.0
21 TraesCS4B01G008000 chr3A 84.324 185 26 2 2065 2249 50906903 50906722 1.870000e-40 178.0
22 TraesCS4B01G008000 chr5D 84.049 815 124 5 4598 5408 552919757 552920569 0.000000e+00 780.0
23 TraesCS4B01G008000 chr5D 75.788 793 155 26 2076 2854 553345920 553345151 3.720000e-97 366.0
24 TraesCS4B01G008000 chr5D 82.687 335 50 5 4156 4483 553344743 553344410 2.300000e-74 291.0
25 TraesCS4B01G008000 chr5D 92.965 199 12 2 6337 6534 257156209 257156012 8.290000e-74 289.0
26 TraesCS4B01G008000 chr5D 90.594 202 18 1 6333 6534 386175931 386175731 3.880000e-67 267.0
27 TraesCS4B01G008000 chr5D 88.263 213 25 0 4262 4474 552919483 552919695 8.410000e-64 255.0
28 TraesCS4B01G008000 chr5D 85.484 62 5 4 5099 5158 371842765 371842824 1.970000e-05 62.1
29 TraesCS4B01G008000 chr5B 80.305 985 172 16 4598 5568 697378354 697377378 0.000000e+00 725.0
30 TraesCS4B01G008000 chr5B 83.747 443 64 5 4048 4483 697378871 697378430 4.710000e-111 412.0
31 TraesCS4B01G008000 chr5B 92.857 42 3 0 5117 5158 441671321 441671362 1.970000e-05 62.1
32 TraesCS4B01G008000 chr3D 93.909 197 11 1 6338 6534 26008572 26008377 4.950000e-76 296.0
33 TraesCS4B01G008000 chr6B 90.995 211 17 2 6325 6534 608169432 608169223 3.860000e-72 283.0
34 TraesCS4B01G008000 chrUn 91.457 199 16 1 6334 6532 110646327 110646130 8.350000e-69 272.0
35 TraesCS4B01G008000 chr7D 91.371 197 15 2 6338 6534 625229033 625229227 1.080000e-67 268.0
36 TraesCS4B01G008000 chr2D 90.955 199 17 1 6336 6534 551329595 551329398 3.880000e-67 267.0
37 TraesCS4B01G008000 chr4D 87.391 230 29 0 2405 2634 3909842 3909613 1.400000e-66 265.0
38 TraesCS4B01G008000 chr1B 74.386 285 60 7 1448 1730 622938284 622938011 6.930000e-20 110.0
39 TraesCS4B01G008000 chr1B 78.363 171 32 5 2669 2836 588328612 588328444 8.960000e-19 106.0
40 TraesCS4B01G008000 chr1A 80.851 141 21 2 1447 1587 532379065 532379199 8.960000e-19 106.0
41 TraesCS4B01G008000 chr1A 82.906 117 20 0 2669 2785 532629728 532629612 8.960000e-19 106.0
42 TraesCS4B01G008000 chr1D 73.056 360 71 18 1448 1797 434515187 434515530 3.220000e-18 104.0
43 TraesCS4B01G008000 chr1D 77.914 163 34 2 2669 2830 434594277 434594116 4.170000e-17 100.0
44 TraesCS4B01G008000 chr1D 74.254 268 48 18 3058 3316 433923723 433923978 6.980000e-15 93.5
45 TraesCS4B01G008000 chr1D 90.909 44 3 1 1444 1487 435364869 435364911 2.540000e-04 58.4
46 TraesCS4B01G008000 chr5A 92.857 42 3 0 5117 5158 474929392 474929433 1.970000e-05 62.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G008000 chr4B 5358440 5364973 6533 False 5670.000000 6553 100.000000 1 6534 2 chr4B.!!$F1 6533
1 TraesCS4B01G008000 chr4B 5405561 5410076 4515 False 761.400000 1576 85.514800 766 5591 5 chr4B.!!$F2 4825
2 TraesCS4B01G008000 chr4A 601030864 601037926 7062 False 1006.244444 3873 92.996111 1 6336 9 chr4A.!!$F1 6335
3 TraesCS4B01G008000 chr3A 50903530 50907258 3728 True 578.250000 926 82.858500 1447 5591 4 chr3A.!!$R2 4144
4 TraesCS4B01G008000 chr5D 552919483 552920569 1086 False 517.500000 780 86.156000 4262 5408 2 chr5D.!!$F2 1146
5 TraesCS4B01G008000 chr5D 553344410 553345920 1510 True 328.500000 366 79.237500 2076 4483 2 chr5D.!!$R3 2407
6 TraesCS4B01G008000 chr5B 697377378 697378871 1493 True 568.500000 725 82.026000 4048 5568 2 chr5B.!!$R1 1520

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
925 2047 0.039074 ACGACTCTGTGCGAAAGAGG 60.039 55.000 12.96 1.59 44.58 3.69 F
931 2053 0.318441 CTGTGCGAAAGAGGGTCTGA 59.682 55.000 0.00 0.00 0.00 3.27 F
1395 2882 0.540454 TAAACACACACACACCCGGA 59.460 50.000 0.73 0.00 0.00 5.14 F
1396 2883 1.027792 AAACACACACACACCCGGAC 61.028 55.000 0.73 0.00 0.00 4.79 F
2416 4164 1.255667 ACACTCCGCCGTACCTTGAT 61.256 55.000 0.00 0.00 0.00 2.57 F
2550 4304 2.025416 CCATCATTCCAACCACCACCTA 60.025 50.000 0.00 0.00 0.00 3.08 F
2551 4305 2.871096 TCATTCCAACCACCACCTAC 57.129 50.000 0.00 0.00 0.00 3.18 F
2763 4553 3.431415 CGATACTATGGTCTGGGATGGA 58.569 50.000 0.00 0.00 0.00 3.41 F
4629 6532 3.073356 TGACCCTTTAAGTACCAACTGGG 59.927 47.826 0.00 8.69 39.87 4.45 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1974 3463 1.275291 TGGTCCGAAGTTGATCCTGTC 59.725 52.381 0.00 0.00 0.00 3.51 R
2551 4305 1.961277 GTCCTGTGAGTTGGTGCCG 60.961 63.158 0.00 0.00 0.00 5.69 R
2943 4738 3.492313 GACATCCGTGAGATTTGCAAAC 58.508 45.455 15.41 8.73 30.59 2.93 R
3389 5240 4.889409 CAGGATTGTTGCCATACCTACAAT 59.111 41.667 0.00 0.00 41.50 2.71 R
3471 5337 5.012239 ACAACTACCGGAACTACTATGTGA 58.988 41.667 9.46 0.00 0.00 3.58 R
4469 6369 3.675228 GCCCTTCAAATTGCAGACTGATG 60.675 47.826 6.65 0.00 0.00 3.07 R
4525 6427 4.998672 CCTTGTATTTTGAGGTTGTCGGTA 59.001 41.667 0.00 0.00 0.00 4.02 R
4736 6647 2.288948 TGGGTCACTGCATTTTCATTGC 60.289 45.455 0.00 0.00 40.55 3.56 R
6484 8486 0.033796 CTCCGGACCCACTACCACTA 60.034 60.000 0.00 0.00 0.00 2.74 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
79 80 6.868339 GTGGCATTCTAAACAGCTTTTGTAAT 59.132 34.615 0.00 0.00 39.73 1.89
101 102 0.458260 AAAAACACAAGGTCACCCGC 59.542 50.000 0.00 0.00 35.12 6.13
102 103 0.681564 AAAACACAAGGTCACCCGCA 60.682 50.000 0.00 0.00 35.12 5.69
103 104 0.681564 AAACACAAGGTCACCCGCAA 60.682 50.000 0.00 0.00 35.12 4.85
104 105 0.681564 AACACAAGGTCACCCGCAAA 60.682 50.000 0.00 0.00 35.12 3.68
105 106 0.681564 ACACAAGGTCACCCGCAAAA 60.682 50.000 0.00 0.00 35.12 2.44
106 107 0.457851 CACAAGGTCACCCGCAAAAA 59.542 50.000 0.00 0.00 35.12 1.94
136 137 5.064441 AGGCAAATCTTTTCGAATTGAGG 57.936 39.130 11.60 3.72 35.04 3.86
150 151 8.621532 TTCGAATTGAGGGATAATTAAGATGG 57.378 34.615 0.00 0.00 0.00 3.51
172 173 9.748708 GATGGCAGCTTTTAAATATTCAATGTA 57.251 29.630 0.00 0.00 0.00 2.29
222 223 6.072342 TCGCATCATCATCCCAATTCTTATTG 60.072 38.462 0.00 0.00 40.70 1.90
237 238 8.929746 CAATTCTTATTGGCTTTCCTTCTTTTC 58.070 33.333 0.00 0.00 37.97 2.29
238 239 7.595819 TTCTTATTGGCTTTCCTTCTTTTCA 57.404 32.000 0.00 0.00 0.00 2.69
243 244 5.930837 TGGCTTTCCTTCTTTTCAAAAGA 57.069 34.783 8.60 8.60 0.00 2.52
365 880 2.005370 TTCCCGTGTGACCTCTAAGT 57.995 50.000 0.00 0.00 0.00 2.24
380 895 7.837689 TGACCTCTAAGTGTGTATGGTTAGTAT 59.162 37.037 0.00 0.00 0.00 2.12
384 899 8.004087 TCTAAGTGTGTATGGTTAGTATGTCC 57.996 38.462 0.00 0.00 0.00 4.02
387 902 7.253905 AGTGTGTATGGTTAGTATGTCCTTT 57.746 36.000 0.00 0.00 0.00 3.11
462 977 9.383519 TGTCACTTTTGTTTGGCATTTTAAATA 57.616 25.926 0.00 0.00 0.00 1.40
548 1503 7.387673 GGCAAATTTAGTTTTTATGTGCCTTCT 59.612 33.333 7.99 0.00 45.33 2.85
554 1509 5.574188 AGTTTTTATGTGCCTTCTCTGGAT 58.426 37.500 0.00 0.00 0.00 3.41
557 1512 6.916360 TTTTATGTGCCTTCTCTGGATTTT 57.084 33.333 0.00 0.00 0.00 1.82
561 1516 1.888512 TGCCTTCTCTGGATTTTGCAC 59.111 47.619 0.00 0.00 0.00 4.57
571 1526 3.443037 TGGATTTTGCACTGTTTTGTCG 58.557 40.909 0.00 0.00 0.00 4.35
575 1530 3.840890 TTTGCACTGTTTTGTCGAACT 57.159 38.095 0.00 0.00 0.00 3.01
581 1536 4.261031 GCACTGTTTTGTCGAACTGGTATT 60.261 41.667 0.00 0.00 34.10 1.89
626 1581 3.188048 GCTCTCCTATCATGGCAAATTCG 59.812 47.826 0.00 0.00 0.00 3.34
627 1582 4.384056 CTCTCCTATCATGGCAAATTCGT 58.616 43.478 0.00 0.00 0.00 3.85
632 1587 4.799949 CCTATCATGGCAAATTCGTTGTTG 59.200 41.667 0.00 0.00 39.63 3.33
633 1588 3.724508 TCATGGCAAATTCGTTGTTGT 57.275 38.095 0.00 0.00 39.63 3.32
634 1589 4.837896 TCATGGCAAATTCGTTGTTGTA 57.162 36.364 0.00 0.00 39.63 2.41
635 1590 5.188327 TCATGGCAAATTCGTTGTTGTAA 57.812 34.783 0.00 0.00 39.63 2.41
636 1591 5.777802 TCATGGCAAATTCGTTGTTGTAAT 58.222 33.333 0.00 0.00 39.63 1.89
637 1592 6.914259 TCATGGCAAATTCGTTGTTGTAATA 58.086 32.000 0.00 0.00 39.63 0.98
638 1593 7.371159 TCATGGCAAATTCGTTGTTGTAATAA 58.629 30.769 0.00 0.00 39.63 1.40
639 1594 7.867909 TCATGGCAAATTCGTTGTTGTAATAAA 59.132 29.630 0.00 0.00 39.63 1.40
640 1595 7.396190 TGGCAAATTCGTTGTTGTAATAAAC 57.604 32.000 0.00 0.00 39.63 2.01
641 1596 7.203910 TGGCAAATTCGTTGTTGTAATAAACT 58.796 30.769 0.00 0.00 39.63 2.66
642 1597 8.350722 TGGCAAATTCGTTGTTGTAATAAACTA 58.649 29.630 0.00 0.00 39.63 2.24
643 1598 8.632551 GGCAAATTCGTTGTTGTAATAAACTAC 58.367 33.333 0.00 0.00 39.63 2.73
644 1599 9.171701 GCAAATTCGTTGTTGTAATAAACTACA 57.828 29.630 0.00 0.00 41.22 2.74
660 1615 4.634184 ACTACAGTACGATCGAGCAAAT 57.366 40.909 24.34 0.00 0.00 2.32
679 1634 6.273071 GCAAATCTGCCGTCCTAAAATATTT 58.727 36.000 0.00 0.00 43.26 1.40
685 1640 7.159372 TCTGCCGTCCTAAAATATTTATCTCC 58.841 38.462 0.01 0.00 0.00 3.71
687 1642 6.043938 TGCCGTCCTAAAATATTTATCTCCCT 59.956 38.462 0.01 0.00 0.00 4.20
688 1643 6.371825 GCCGTCCTAAAATATTTATCTCCCTG 59.628 42.308 0.01 0.00 0.00 4.45
690 1645 7.937394 CCGTCCTAAAATATTTATCTCCCTGTT 59.063 37.037 0.01 0.00 0.00 3.16
691 1646 8.774586 CGTCCTAAAATATTTATCTCCCTGTTG 58.225 37.037 0.01 0.00 0.00 3.33
747 1702 4.021925 AAGCCGGGTGAGGTGAGC 62.022 66.667 7.07 0.00 0.00 4.26
848 1804 3.594827 CCGTTCGTCGACATCGCG 61.595 66.667 17.16 13.18 42.86 5.87
924 2046 1.056103 CACGACTCTGTGCGAAAGAG 58.944 55.000 8.20 8.20 45.57 2.85
925 2047 0.039074 ACGACTCTGTGCGAAAGAGG 60.039 55.000 12.96 1.59 44.58 3.69
926 2048 0.734253 CGACTCTGTGCGAAAGAGGG 60.734 60.000 12.96 0.00 44.58 4.30
927 2049 0.318762 GACTCTGTGCGAAAGAGGGT 59.681 55.000 12.96 1.82 44.58 4.34
928 2050 0.318762 ACTCTGTGCGAAAGAGGGTC 59.681 55.000 12.96 0.00 44.58 4.46
929 2051 0.605589 CTCTGTGCGAAAGAGGGTCT 59.394 55.000 2.92 0.00 38.00 3.85
931 2053 0.318441 CTGTGCGAAAGAGGGTCTGA 59.682 55.000 0.00 0.00 0.00 3.27
932 2054 0.976641 TGTGCGAAAGAGGGTCTGAT 59.023 50.000 0.00 0.00 0.00 2.90
943 2065 7.176865 CGAAAGAGGGTCTGATATATACTTGGA 59.823 40.741 0.00 0.00 0.00 3.53
1019 2273 1.135199 CATGTCATGGTTGCTGCTTCC 60.135 52.381 4.78 3.98 0.00 3.46
1130 2607 2.651455 CACTCTACAGTGTCCCCGATA 58.349 52.381 0.00 0.00 44.63 2.92
1139 2616 1.127343 TGTCCCCGATACATGCATGA 58.873 50.000 32.75 16.49 0.00 3.07
1143 2620 3.058016 GTCCCCGATACATGCATGATTTG 60.058 47.826 32.75 20.36 0.00 2.32
1159 2636 7.337150 CATGATTTGCACGTCAACTTTATTT 57.663 32.000 4.48 0.00 33.73 1.40
1160 2637 6.746104 TGATTTGCACGTCAACTTTATTTG 57.254 33.333 0.00 0.00 33.73 2.32
1161 2638 6.269315 TGATTTGCACGTCAACTTTATTTGT 58.731 32.000 0.00 0.00 33.73 2.83
1163 2640 6.952935 TTTGCACGTCAACTTTATTTGTTT 57.047 29.167 0.00 0.00 33.73 2.83
1258 2739 3.428862 GGTGAAATGTTCGCTAAATGGGG 60.429 47.826 1.94 0.00 40.00 4.96
1389 2876 8.894731 ACAAACACTATAATAAACACACACACA 58.105 29.630 0.00 0.00 0.00 3.72
1391 2878 7.429636 ACACTATAATAAACACACACACACC 57.570 36.000 0.00 0.00 0.00 4.16
1392 2879 6.428771 ACACTATAATAAACACACACACACCC 59.571 38.462 0.00 0.00 0.00 4.61
1393 2880 5.640357 ACTATAATAAACACACACACACCCG 59.360 40.000 0.00 0.00 0.00 5.28
1394 2881 1.600023 ATAAACACACACACACCCGG 58.400 50.000 0.00 0.00 0.00 5.73
1395 2882 0.540454 TAAACACACACACACCCGGA 59.460 50.000 0.73 0.00 0.00 5.14
1396 2883 1.027792 AAACACACACACACCCGGAC 61.028 55.000 0.73 0.00 0.00 4.79
1397 2884 1.906105 AACACACACACACCCGGACT 61.906 55.000 0.73 0.00 0.00 3.85
1398 2885 1.594293 CACACACACACCCGGACTC 60.594 63.158 0.73 0.00 0.00 3.36
1432 2919 6.594744 AGAATGCACATAGTCAATACCATGA 58.405 36.000 0.00 0.00 30.29 3.07
1436 2923 7.263100 TGCACATAGTCAATACCATGATTTC 57.737 36.000 0.00 0.00 30.29 2.17
1511 3000 2.102588 GGGCTACGTGGATAACATCACT 59.897 50.000 1.81 0.00 0.00 3.41
1694 3183 2.435372 TGCCTGGGCTAAAATACCTG 57.565 50.000 13.05 0.00 42.51 4.00
1919 3408 2.049618 GCGCTAGATCTGAGGCCG 60.050 66.667 5.18 1.99 0.00 6.13
1974 3463 1.746615 CATGGCCTGGTTCTGGTCG 60.747 63.158 3.32 0.00 29.45 4.79
1995 3484 1.276421 ACAGGATCAACTTCGGACCAG 59.724 52.381 0.00 0.00 0.00 4.00
2026 3515 3.951037 AGTGCTACTATCAGGTGAGAGTG 59.049 47.826 15.87 8.17 45.17 3.51
2063 3642 7.191551 ACTCTATCACAAAATGCAATTGATCG 58.808 34.615 19.06 9.24 36.10 3.69
2074 3653 7.837202 AATGCAATTGATCGATTGTTTCAAT 57.163 28.000 28.55 14.06 40.78 2.57
2416 4164 1.255667 ACACTCCGCCGTACCTTGAT 61.256 55.000 0.00 0.00 0.00 2.57
2550 4304 2.025416 CCATCATTCCAACCACCACCTA 60.025 50.000 0.00 0.00 0.00 3.08
2551 4305 2.871096 TCATTCCAACCACCACCTAC 57.129 50.000 0.00 0.00 0.00 3.18
2763 4553 3.431415 CGATACTATGGTCTGGGATGGA 58.569 50.000 0.00 0.00 0.00 3.41
2889 4684 7.452880 AACTGATTAGCTGCTTTGATGTTAA 57.547 32.000 7.79 0.00 0.00 2.01
2890 4685 7.636150 ACTGATTAGCTGCTTTGATGTTAAT 57.364 32.000 7.79 0.00 0.00 1.40
2891 4686 8.737168 ACTGATTAGCTGCTTTGATGTTAATA 57.263 30.769 7.79 0.00 0.00 0.98
2892 4687 9.347240 ACTGATTAGCTGCTTTGATGTTAATAT 57.653 29.630 7.79 0.00 0.00 1.28
3005 4805 5.121811 GTCTGATACTCGTACTTCTACCCA 58.878 45.833 0.00 0.00 0.00 4.51
3038 4846 8.702163 ACAATTCTTTTTGACAAAAGTGGTAG 57.298 30.769 12.84 7.94 46.35 3.18
3185 5023 6.252233 TCCAGTTGATTTGAATGTTCCCATA 58.748 36.000 0.00 0.00 0.00 2.74
3975 5842 7.012943 GTGAAAATGCATCATTGATGTTTGTG 58.987 34.615 23.86 3.75 41.60 3.33
3982 5849 4.177165 TCATTGATGTTTGTGATGGCAC 57.823 40.909 0.00 0.00 45.35 5.01
4314 6188 4.326826 TCTTGTCCAGGCTCATGTTTTAG 58.673 43.478 0.00 0.00 0.00 1.85
4362 6236 3.505680 GTCCATGATTGGTTACTGCAACA 59.494 43.478 0.00 0.00 44.06 3.33
4525 6427 6.813152 CACCTGAATTTTCATTTAAGCCGAAT 59.187 34.615 0.00 0.00 36.46 3.34
4629 6532 3.073356 TGACCCTTTAAGTACCAACTGGG 59.927 47.826 0.00 8.69 39.87 4.45
4736 6647 1.588674 TGAAACGGCACAAGGTACAG 58.411 50.000 0.00 0.00 0.00 2.74
4739 6650 0.464735 AACGGCACAAGGTACAGCAA 60.465 50.000 0.00 0.00 0.00 3.91
5028 6948 2.743752 TACGTCGACCTCTTCCGCG 61.744 63.158 10.58 0.00 0.00 6.46
5092 7013 0.108329 ACGCACATGCCTACAGGTAC 60.108 55.000 0.00 0.00 39.16 3.34
5221 7145 1.746615 CCTCATCAACTGGGCACGG 60.747 63.158 0.00 0.00 0.00 4.94
5424 7348 1.009389 GGCTTCGAACGAGGTGACAG 61.009 60.000 8.00 0.00 0.00 3.51
5470 7394 4.119556 TGGTGGAATGAACCCAAACATA 57.880 40.909 0.00 0.00 36.83 2.29
5479 7403 7.093509 GGAATGAACCCAAACATAGGTTACAAT 60.094 37.037 0.00 0.00 46.38 2.71
5488 7412 7.825270 CCAAACATAGGTTACAATACTACCACA 59.175 37.037 0.00 0.00 35.82 4.17
5512 7436 2.100252 CCAATCCATTGATGTGAGCCAC 59.900 50.000 0.56 0.00 40.14 5.01
5624 7586 9.654663 CTTGCATGATCAGATTTCTATGAGATA 57.345 33.333 0.09 0.00 0.00 1.98
5729 7691 7.112779 TCCCCTCAGTTTATGAATCTTTTCTC 58.887 38.462 0.00 0.00 37.52 2.87
5754 7718 7.453439 TCAATTATCTCCGGTATCCATACTTCA 59.547 37.037 0.00 0.00 33.81 3.02
5764 7728 6.064717 GGTATCCATACTTCAAATCAGCCTT 58.935 40.000 0.00 0.00 33.81 4.35
5795 7759 5.764686 ACTCAGAACTGAATTGCACATTGTA 59.235 36.000 6.01 0.00 39.39 2.41
5803 7767 7.923888 ACTGAATTGCACATTGTAGATATGAC 58.076 34.615 0.00 0.00 0.00 3.06
5809 7773 8.454570 TTGCACATTGTAGATATGACATTCAT 57.545 30.769 0.00 0.00 40.72 2.57
5819 7783 9.258826 GTAGATATGACATTCATGATCATAGCC 57.741 37.037 21.16 15.10 37.70 3.93
5844 7808 2.579201 CTACCAGTCAGGGGTGCG 59.421 66.667 0.00 0.00 43.89 5.34
5846 7810 1.305802 TACCAGTCAGGGGTGCGAT 60.306 57.895 0.00 0.00 43.89 4.58
5847 7811 0.907704 TACCAGTCAGGGGTGCGATT 60.908 55.000 0.00 0.00 43.89 3.34
5848 7812 1.746615 CCAGTCAGGGGTGCGATTG 60.747 63.158 0.00 0.00 0.00 2.67
5850 7814 0.249120 CAGTCAGGGGTGCGATTGTA 59.751 55.000 0.00 0.00 0.00 2.41
5851 7815 0.537188 AGTCAGGGGTGCGATTGTAG 59.463 55.000 0.00 0.00 0.00 2.74
5853 7817 0.535335 TCAGGGGTGCGATTGTAGTC 59.465 55.000 0.00 0.00 0.00 2.59
5854 7818 0.806102 CAGGGGTGCGATTGTAGTCG 60.806 60.000 0.00 0.00 44.14 4.18
5863 7864 2.223502 GCGATTGTAGTCGAGTGGATCA 60.224 50.000 2.10 0.00 44.06 2.92
5864 7865 3.364062 CGATTGTAGTCGAGTGGATCAC 58.636 50.000 2.10 0.00 44.06 3.06
5872 7873 1.517832 GAGTGGATCACGGAGGTGG 59.482 63.158 0.00 0.00 44.50 4.61
5878 7879 0.811616 GATCACGGAGGTGGATGCAC 60.812 60.000 9.16 9.16 44.50 4.57
5896 7897 1.053424 ACTTTAGGCGGACAAGACCA 58.947 50.000 0.00 0.00 0.00 4.02
5915 7916 4.193967 AGCCCATGGGGTGAGAAT 57.806 55.556 34.54 0.00 46.51 2.40
5936 7937 0.243636 CGTGGGAAAAGGAATGTGCC 59.756 55.000 0.00 0.00 0.00 5.01
5940 7941 0.811281 GGAAAAGGAATGTGCCCTCG 59.189 55.000 0.00 0.00 32.57 4.63
5943 7944 0.400213 AAAGGAATGTGCCCTCGACA 59.600 50.000 0.00 0.00 32.57 4.35
5978 7979 0.378257 GCACACGATGTTGGGCATAG 59.622 55.000 0.00 0.00 45.94 2.23
5986 7987 4.100963 ACGATGTTGGGCATAGTCAGATTA 59.899 41.667 0.00 0.00 38.76 1.75
5989 7990 5.435686 TGTTGGGCATAGTCAGATTACTT 57.564 39.130 0.00 0.00 0.00 2.24
5992 7993 5.282055 TGGGCATAGTCAGATTACTTGAG 57.718 43.478 0.00 0.00 0.00 3.02
6000 8001 9.029368 CATAGTCAGATTACTTGAGATGGGATA 57.971 37.037 0.00 0.00 0.00 2.59
6002 8003 8.133024 AGTCAGATTACTTGAGATGGGATATC 57.867 38.462 0.00 0.00 0.00 1.63
6047 8048 5.163834 GCATAGCCAAACCAAACATGATTTG 60.164 40.000 0.00 6.74 32.89 2.32
6055 8056 9.001542 CCAAACCAAACATGATTTGATGTTATT 57.998 29.630 17.13 0.00 44.15 1.40
6106 8107 1.185189 GCCAACGAAACAAACACGTC 58.815 50.000 0.00 0.00 39.31 4.34
6138 8139 4.039004 ACATTTCACTAAACCATGCAAGCA 59.961 37.500 0.00 0.00 0.00 3.91
6161 8162 5.897377 ATGTTTAACTTCACCTGGCATAC 57.103 39.130 0.00 0.00 0.00 2.39
6170 8171 5.128171 ACTTCACCTGGCATACGTATTAAGA 59.872 40.000 5.03 0.00 0.00 2.10
6179 8180 6.053650 GGCATACGTATTAAGAGGGAAAAGT 58.946 40.000 5.03 0.00 0.00 2.66
6192 8193 7.220741 AGAGGGAAAAGTTGCTTCTTTATTC 57.779 36.000 7.01 3.49 33.78 1.75
6212 8213 3.680490 TCTACATCAACCAAATCGCCAA 58.320 40.909 0.00 0.00 0.00 4.52
6223 8224 1.153353 AATCGCCAACACAGTAACCG 58.847 50.000 0.00 0.00 0.00 4.44
6230 8231 2.547218 CCAACACAGTAACCGTGCTACT 60.547 50.000 0.00 0.00 37.93 2.57
6240 8241 1.202582 ACCGTGCTACTGCTACTCAAG 59.797 52.381 0.00 0.00 40.48 3.02
6243 8244 2.611518 GTGCTACTGCTACTCAAGTGG 58.388 52.381 0.00 0.00 40.48 4.00
6271 8272 8.146412 AGCTGCAAATTCTTTTCATTCTAACTT 58.854 29.630 1.02 0.00 0.00 2.66
6278 8279 9.764363 AATTCTTTTCATTCTAACTTTTGTCCC 57.236 29.630 0.00 0.00 0.00 4.46
6308 8310 2.686119 GGTTACCCCTGGCTCTACATA 58.314 52.381 0.00 0.00 0.00 2.29
6310 8312 3.651423 GGTTACCCCTGGCTCTACATAAT 59.349 47.826 0.00 0.00 0.00 1.28
6336 8338 6.306356 GCGATGCACATAGCCATTTTATTTAG 59.694 38.462 4.57 0.00 44.83 1.85
6337 8339 6.803320 CGATGCACATAGCCATTTTATTTAGG 59.197 38.462 0.00 0.00 44.83 2.69
6338 8340 6.403866 TGCACATAGCCATTTTATTTAGGG 57.596 37.500 0.00 0.00 44.83 3.53
6339 8341 5.896678 TGCACATAGCCATTTTATTTAGGGT 59.103 36.000 0.00 0.00 44.83 4.34
6340 8342 6.382570 TGCACATAGCCATTTTATTTAGGGTT 59.617 34.615 0.00 0.00 44.83 4.11
6341 8343 7.561722 TGCACATAGCCATTTTATTTAGGGTTA 59.438 33.333 0.00 0.00 44.83 2.85
6342 8344 8.417884 GCACATAGCCATTTTATTTAGGGTTAA 58.582 33.333 0.00 0.00 37.23 2.01
6357 8359 8.673456 TTTAGGGTTAATTATCTTTTTGCCCT 57.327 30.769 0.00 0.00 45.07 5.19
6358 8360 6.791867 AGGGTTAATTATCTTTTTGCCCTC 57.208 37.500 0.00 0.00 39.57 4.30
6359 8361 6.260663 AGGGTTAATTATCTTTTTGCCCTCA 58.739 36.000 0.00 0.00 39.57 3.86
6360 8362 6.381133 AGGGTTAATTATCTTTTTGCCCTCAG 59.619 38.462 0.00 0.00 39.57 3.35
6361 8363 6.154534 GGGTTAATTATCTTTTTGCCCTCAGT 59.845 38.462 0.00 0.00 0.00 3.41
6362 8364 7.035612 GGTTAATTATCTTTTTGCCCTCAGTG 58.964 38.462 0.00 0.00 0.00 3.66
6363 8365 5.665916 AATTATCTTTTTGCCCTCAGTGG 57.334 39.130 0.00 0.00 0.00 4.00
6364 8366 2.683211 ATCTTTTTGCCCTCAGTGGT 57.317 45.000 0.00 0.00 0.00 4.16
6365 8367 3.806949 ATCTTTTTGCCCTCAGTGGTA 57.193 42.857 0.00 0.00 0.00 3.25
6366 8368 3.806949 TCTTTTTGCCCTCAGTGGTAT 57.193 42.857 0.00 0.00 0.00 2.73
6367 8369 3.686016 TCTTTTTGCCCTCAGTGGTATC 58.314 45.455 0.00 0.00 0.00 2.24
6368 8370 2.507407 TTTTGCCCTCAGTGGTATCC 57.493 50.000 0.00 0.00 0.00 2.59
6369 8371 1.367346 TTTGCCCTCAGTGGTATCCA 58.633 50.000 0.00 0.00 0.00 3.41
6370 8372 1.595311 TTGCCCTCAGTGGTATCCAT 58.405 50.000 0.00 0.00 35.28 3.41
6371 8373 0.839277 TGCCCTCAGTGGTATCCATG 59.161 55.000 0.00 0.00 35.28 3.66
6372 8374 0.839946 GCCCTCAGTGGTATCCATGT 59.160 55.000 0.00 0.00 35.28 3.21
6373 8375 1.475751 GCCCTCAGTGGTATCCATGTG 60.476 57.143 0.00 0.00 35.28 3.21
6374 8376 1.475751 CCCTCAGTGGTATCCATGTGC 60.476 57.143 0.00 0.00 35.28 4.57
6375 8377 1.487976 CCTCAGTGGTATCCATGTGCT 59.512 52.381 0.00 0.00 35.28 4.40
6376 8378 2.484417 CCTCAGTGGTATCCATGTGCTC 60.484 54.545 0.00 0.00 35.28 4.26
6377 8379 2.169144 CTCAGTGGTATCCATGTGCTCA 59.831 50.000 0.00 0.00 35.28 4.26
6378 8380 2.169144 TCAGTGGTATCCATGTGCTCAG 59.831 50.000 0.00 0.00 35.28 3.35
6379 8381 2.093288 CAGTGGTATCCATGTGCTCAGT 60.093 50.000 0.00 0.00 35.28 3.41
6380 8382 2.573462 AGTGGTATCCATGTGCTCAGTT 59.427 45.455 0.00 0.00 35.28 3.16
6381 8383 3.009473 AGTGGTATCCATGTGCTCAGTTT 59.991 43.478 0.00 0.00 35.28 2.66
6382 8384 3.758554 GTGGTATCCATGTGCTCAGTTTT 59.241 43.478 0.00 0.00 35.28 2.43
6383 8385 3.758023 TGGTATCCATGTGCTCAGTTTTG 59.242 43.478 0.00 0.00 0.00 2.44
6384 8386 3.428045 GGTATCCATGTGCTCAGTTTTGC 60.428 47.826 0.00 0.00 0.00 3.68
6385 8387 0.961019 TCCATGTGCTCAGTTTTGCC 59.039 50.000 0.00 0.00 0.00 4.52
6386 8388 0.037975 CCATGTGCTCAGTTTTGCCC 60.038 55.000 0.00 0.00 0.00 5.36
6387 8389 0.963962 CATGTGCTCAGTTTTGCCCT 59.036 50.000 0.00 0.00 0.00 5.19
6388 8390 1.068055 CATGTGCTCAGTTTTGCCCTC 60.068 52.381 0.00 0.00 0.00 4.30
6389 8391 0.106769 TGTGCTCAGTTTTGCCCTCA 60.107 50.000 0.00 0.00 0.00 3.86
6390 8392 1.032014 GTGCTCAGTTTTGCCCTCAA 58.968 50.000 0.00 0.00 0.00 3.02
6391 8393 1.615392 GTGCTCAGTTTTGCCCTCAAT 59.385 47.619 0.00 0.00 31.33 2.57
6392 8394 2.036346 GTGCTCAGTTTTGCCCTCAATT 59.964 45.455 0.00 0.00 31.33 2.32
6393 8395 2.036217 TGCTCAGTTTTGCCCTCAATTG 59.964 45.455 0.00 0.00 31.33 2.32
6394 8396 2.036346 GCTCAGTTTTGCCCTCAATTGT 59.964 45.455 5.13 0.00 31.33 2.71
6395 8397 3.645884 CTCAGTTTTGCCCTCAATTGTG 58.354 45.455 5.13 2.61 31.33 3.33
6396 8398 3.295093 TCAGTTTTGCCCTCAATTGTGA 58.705 40.909 9.06 0.00 31.33 3.58
6397 8399 3.703556 TCAGTTTTGCCCTCAATTGTGAA 59.296 39.130 9.06 0.00 31.88 3.18
6398 8400 4.344679 TCAGTTTTGCCCTCAATTGTGAAT 59.655 37.500 9.06 0.00 31.88 2.57
6399 8401 4.687483 CAGTTTTGCCCTCAATTGTGAATC 59.313 41.667 9.06 0.00 31.88 2.52
6400 8402 3.574284 TTTGCCCTCAATTGTGAATCG 57.426 42.857 9.06 0.00 31.88 3.34
6401 8403 2.198827 TGCCCTCAATTGTGAATCGT 57.801 45.000 9.06 0.00 31.88 3.73
6402 8404 1.811965 TGCCCTCAATTGTGAATCGTG 59.188 47.619 9.06 0.00 31.88 4.35
6403 8405 1.468054 GCCCTCAATTGTGAATCGTGC 60.468 52.381 9.06 0.00 31.88 5.34
6404 8406 2.086869 CCCTCAATTGTGAATCGTGCT 58.913 47.619 9.06 0.00 31.88 4.40
6405 8407 2.096496 CCCTCAATTGTGAATCGTGCTC 59.904 50.000 9.06 0.00 31.88 4.26
6406 8408 2.743664 CCTCAATTGTGAATCGTGCTCA 59.256 45.455 9.06 0.00 31.88 4.26
6407 8409 3.181513 CCTCAATTGTGAATCGTGCTCAG 60.182 47.826 9.06 0.00 31.88 3.35
6408 8410 3.402110 TCAATTGTGAATCGTGCTCAGT 58.598 40.909 5.13 0.00 0.00 3.41
6409 8411 3.814842 TCAATTGTGAATCGTGCTCAGTT 59.185 39.130 5.13 0.00 0.00 3.16
6410 8412 4.275689 TCAATTGTGAATCGTGCTCAGTTT 59.724 37.500 5.13 0.00 0.00 2.66
6411 8413 4.836125 ATTGTGAATCGTGCTCAGTTTT 57.164 36.364 0.00 0.00 0.00 2.43
6412 8414 3.607422 TGTGAATCGTGCTCAGTTTTG 57.393 42.857 0.00 0.00 0.00 2.44
6413 8415 2.286950 TGTGAATCGTGCTCAGTTTTGC 60.287 45.455 0.00 0.00 0.00 3.68
6414 8416 1.266718 TGAATCGTGCTCAGTTTTGCC 59.733 47.619 0.00 0.00 0.00 4.52
6415 8417 0.598065 AATCGTGCTCAGTTTTGCCC 59.402 50.000 0.00 0.00 0.00 5.36
6416 8418 1.244019 ATCGTGCTCAGTTTTGCCCC 61.244 55.000 0.00 0.00 0.00 5.80
6417 8419 1.898574 CGTGCTCAGTTTTGCCCCT 60.899 57.895 0.00 0.00 0.00 4.79
6418 8420 0.605319 CGTGCTCAGTTTTGCCCCTA 60.605 55.000 0.00 0.00 0.00 3.53
6419 8421 1.168714 GTGCTCAGTTTTGCCCCTAG 58.831 55.000 0.00 0.00 0.00 3.02
6420 8422 1.064003 TGCTCAGTTTTGCCCCTAGA 58.936 50.000 0.00 0.00 0.00 2.43
6421 8423 1.271379 TGCTCAGTTTTGCCCCTAGAC 60.271 52.381 0.00 0.00 0.00 2.59
6422 8424 1.003696 GCTCAGTTTTGCCCCTAGACT 59.996 52.381 0.00 0.00 0.00 3.24
6423 8425 2.704572 CTCAGTTTTGCCCCTAGACTG 58.295 52.381 0.00 0.00 39.16 3.51
6424 8426 2.039084 CTCAGTTTTGCCCCTAGACTGT 59.961 50.000 5.65 0.00 38.95 3.55
6425 8427 2.154462 CAGTTTTGCCCCTAGACTGTG 58.846 52.381 0.00 0.00 34.51 3.66
6426 8428 1.774856 AGTTTTGCCCCTAGACTGTGT 59.225 47.619 0.00 0.00 0.00 3.72
6427 8429 1.880027 GTTTTGCCCCTAGACTGTGTG 59.120 52.381 0.00 0.00 0.00 3.82
6428 8430 0.250727 TTTGCCCCTAGACTGTGTGC 60.251 55.000 0.00 0.00 0.00 4.57
6429 8431 1.414866 TTGCCCCTAGACTGTGTGCA 61.415 55.000 0.00 0.00 0.00 4.57
6430 8432 1.374947 GCCCCTAGACTGTGTGCAA 59.625 57.895 0.00 0.00 0.00 4.08
6431 8433 0.955919 GCCCCTAGACTGTGTGCAAC 60.956 60.000 0.00 0.00 37.35 4.17
6432 8434 0.687354 CCCCTAGACTGTGTGCAACT 59.313 55.000 0.00 0.00 38.04 3.16
6433 8435 1.899814 CCCCTAGACTGTGTGCAACTA 59.100 52.381 0.00 0.00 38.04 2.24
6434 8436 2.353803 CCCCTAGACTGTGTGCAACTAC 60.354 54.545 0.00 0.00 38.04 2.73
6435 8437 2.563179 CCCTAGACTGTGTGCAACTACT 59.437 50.000 0.00 0.00 38.04 2.57
6436 8438 3.762288 CCCTAGACTGTGTGCAACTACTA 59.238 47.826 0.00 0.00 38.04 1.82
6437 8439 4.402793 CCCTAGACTGTGTGCAACTACTAT 59.597 45.833 0.00 0.00 38.04 2.12
6438 8440 5.344066 CCTAGACTGTGTGCAACTACTATG 58.656 45.833 0.00 0.00 38.04 2.23
6439 8441 5.125578 CCTAGACTGTGTGCAACTACTATGA 59.874 44.000 0.00 0.00 38.04 2.15
6440 8442 4.810790 AGACTGTGTGCAACTACTATGAC 58.189 43.478 0.00 0.00 38.04 3.06
6441 8443 3.575630 ACTGTGTGCAACTACTATGACG 58.424 45.455 0.00 0.00 38.04 4.35
6442 8444 3.254903 ACTGTGTGCAACTACTATGACGA 59.745 43.478 0.00 0.00 38.04 4.20
6443 8445 3.833442 TGTGTGCAACTACTATGACGAG 58.167 45.455 0.00 0.00 38.04 4.18
6444 8446 3.179830 GTGTGCAACTACTATGACGAGG 58.820 50.000 0.00 0.00 38.04 4.63
6445 8447 2.194271 GTGCAACTACTATGACGAGGC 58.806 52.381 0.00 0.00 0.00 4.70
6446 8448 1.136305 TGCAACTACTATGACGAGGCC 59.864 52.381 0.00 0.00 0.00 5.19
6447 8449 1.136305 GCAACTACTATGACGAGGCCA 59.864 52.381 5.01 0.00 0.00 5.36
6448 8450 2.418197 GCAACTACTATGACGAGGCCAA 60.418 50.000 5.01 0.00 0.00 4.52
6449 8451 3.857052 CAACTACTATGACGAGGCCAAA 58.143 45.455 5.01 0.00 0.00 3.28
6450 8452 3.521947 ACTACTATGACGAGGCCAAAC 57.478 47.619 5.01 0.00 0.00 2.93
6451 8453 2.829720 ACTACTATGACGAGGCCAAACA 59.170 45.455 5.01 0.00 0.00 2.83
6452 8454 2.386661 ACTATGACGAGGCCAAACAG 57.613 50.000 5.01 0.00 0.00 3.16
6453 8455 1.066143 ACTATGACGAGGCCAAACAGG 60.066 52.381 5.01 0.17 41.84 4.00
6467 8469 2.435372 AACAGGCAGTTTTGAGTCCA 57.565 45.000 0.00 0.00 37.03 4.02
6468 8470 2.664402 ACAGGCAGTTTTGAGTCCAT 57.336 45.000 0.00 0.00 0.00 3.41
6469 8471 2.949447 ACAGGCAGTTTTGAGTCCATT 58.051 42.857 0.00 0.00 0.00 3.16
6470 8472 2.887152 ACAGGCAGTTTTGAGTCCATTC 59.113 45.455 0.00 0.00 0.00 2.67
6471 8473 2.229784 CAGGCAGTTTTGAGTCCATTCC 59.770 50.000 0.00 0.00 0.00 3.01
6472 8474 1.200020 GGCAGTTTTGAGTCCATTCCG 59.800 52.381 0.00 0.00 0.00 4.30
6473 8475 1.880027 GCAGTTTTGAGTCCATTCCGT 59.120 47.619 0.00 0.00 0.00 4.69
6474 8476 2.095718 GCAGTTTTGAGTCCATTCCGTC 60.096 50.000 0.00 0.00 0.00 4.79
6475 8477 3.403038 CAGTTTTGAGTCCATTCCGTCT 58.597 45.455 0.00 0.00 0.00 4.18
6476 8478 4.566004 CAGTTTTGAGTCCATTCCGTCTA 58.434 43.478 0.00 0.00 0.00 2.59
6477 8479 5.178797 CAGTTTTGAGTCCATTCCGTCTAT 58.821 41.667 0.00 0.00 0.00 1.98
6478 8480 5.643777 CAGTTTTGAGTCCATTCCGTCTATT 59.356 40.000 0.00 0.00 0.00 1.73
6479 8481 5.643777 AGTTTTGAGTCCATTCCGTCTATTG 59.356 40.000 0.00 0.00 0.00 1.90
6480 8482 3.819564 TGAGTCCATTCCGTCTATTGG 57.180 47.619 0.00 0.00 0.00 3.16
6481 8483 2.158957 TGAGTCCATTCCGTCTATTGGC 60.159 50.000 0.00 0.00 0.00 4.52
6482 8484 1.202533 AGTCCATTCCGTCTATTGGCG 60.203 52.381 0.00 0.00 0.00 5.69
6483 8485 0.828022 TCCATTCCGTCTATTGGCGT 59.172 50.000 0.00 0.00 0.00 5.68
6484 8486 1.208535 TCCATTCCGTCTATTGGCGTT 59.791 47.619 0.00 0.00 0.00 4.84
6485 8487 2.431419 TCCATTCCGTCTATTGGCGTTA 59.569 45.455 0.00 0.00 0.00 3.18
6486 8488 2.800544 CCATTCCGTCTATTGGCGTTAG 59.199 50.000 0.00 0.00 0.00 2.34
6487 8489 3.454375 CATTCCGTCTATTGGCGTTAGT 58.546 45.455 0.00 0.00 0.00 2.24
6488 8490 2.572191 TCCGTCTATTGGCGTTAGTG 57.428 50.000 0.00 0.00 0.00 2.74
6489 8491 1.135527 TCCGTCTATTGGCGTTAGTGG 59.864 52.381 0.00 0.00 0.00 4.00
6490 8492 1.134907 CCGTCTATTGGCGTTAGTGGT 60.135 52.381 0.00 0.00 0.00 4.16
6491 8493 2.099592 CCGTCTATTGGCGTTAGTGGTA 59.900 50.000 0.00 0.00 0.00 3.25
6492 8494 3.369385 CGTCTATTGGCGTTAGTGGTAG 58.631 50.000 0.00 0.00 0.00 3.18
6493 8495 3.181493 CGTCTATTGGCGTTAGTGGTAGT 60.181 47.826 0.00 0.00 0.00 2.73
6494 8496 4.110482 GTCTATTGGCGTTAGTGGTAGTG 58.890 47.826 0.00 0.00 0.00 2.74
6495 8497 2.396590 ATTGGCGTTAGTGGTAGTGG 57.603 50.000 0.00 0.00 0.00 4.00
6496 8498 0.322322 TTGGCGTTAGTGGTAGTGGG 59.678 55.000 0.00 0.00 0.00 4.61
6497 8499 0.832983 TGGCGTTAGTGGTAGTGGGT 60.833 55.000 0.00 0.00 0.00 4.51
6498 8500 0.108472 GGCGTTAGTGGTAGTGGGTC 60.108 60.000 0.00 0.00 0.00 4.46
6499 8501 0.108472 GCGTTAGTGGTAGTGGGTCC 60.108 60.000 0.00 0.00 0.00 4.46
6500 8502 0.171903 CGTTAGTGGTAGTGGGTCCG 59.828 60.000 0.00 0.00 0.00 4.79
6501 8503 0.533951 GTTAGTGGTAGTGGGTCCGG 59.466 60.000 0.00 0.00 0.00 5.14
6502 8504 0.409092 TTAGTGGTAGTGGGTCCGGA 59.591 55.000 0.00 0.00 0.00 5.14
6503 8505 0.033796 TAGTGGTAGTGGGTCCGGAG 60.034 60.000 3.06 0.00 0.00 4.63
6504 8506 2.682494 TGGTAGTGGGTCCGGAGC 60.682 66.667 25.56 25.56 0.00 4.70
6505 8507 2.363925 GGTAGTGGGTCCGGAGCT 60.364 66.667 31.09 15.77 0.00 4.09
6506 8508 1.988406 GGTAGTGGGTCCGGAGCTT 60.988 63.158 31.09 19.46 0.00 3.74
6507 8509 1.551019 GGTAGTGGGTCCGGAGCTTT 61.551 60.000 31.09 19.13 0.00 3.51
6508 8510 1.188863 GTAGTGGGTCCGGAGCTTTA 58.811 55.000 31.09 18.19 0.00 1.85
6509 8511 1.134877 GTAGTGGGTCCGGAGCTTTAC 60.135 57.143 31.09 25.03 0.00 2.01
6510 8512 0.834687 AGTGGGTCCGGAGCTTTACA 60.835 55.000 31.09 18.61 0.00 2.41
6511 8513 0.672711 GTGGGTCCGGAGCTTTACAC 60.673 60.000 31.09 24.97 0.00 2.90
6512 8514 1.447314 GGGTCCGGAGCTTTACACG 60.447 63.158 31.09 0.00 0.00 4.49
6513 8515 1.291272 GGTCCGGAGCTTTACACGT 59.709 57.895 26.19 0.00 0.00 4.49
6514 8516 1.012486 GGTCCGGAGCTTTACACGTG 61.012 60.000 26.19 15.48 0.00 4.49
6515 8517 1.012486 GTCCGGAGCTTTACACGTGG 61.012 60.000 21.57 2.48 0.00 4.94
6516 8518 1.740296 CCGGAGCTTTACACGTGGG 60.740 63.158 21.57 3.78 0.00 4.61
6517 8519 1.290955 CGGAGCTTTACACGTGGGA 59.709 57.895 21.57 4.16 0.00 4.37
6518 8520 1.012486 CGGAGCTTTACACGTGGGAC 61.012 60.000 21.57 4.37 0.00 4.46
6519 8521 0.672711 GGAGCTTTACACGTGGGACC 60.673 60.000 21.57 9.14 0.00 4.46
6520 8522 1.005394 AGCTTTACACGTGGGACCG 60.005 57.895 21.57 5.18 0.00 4.79
6521 8523 2.674084 GCTTTACACGTGGGACCGC 61.674 63.158 21.57 11.52 0.00 5.68
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
30 31 8.380644 CACGTGAGTAGGACAATATTTTGTAAG 58.619 37.037 10.90 0.00 44.65 2.34
107 108 6.976636 TTCGAAAAGATTTGCCTTGTTTTT 57.023 29.167 0.00 0.00 0.00 1.94
108 109 7.279758 TCAATTCGAAAAGATTTGCCTTGTTTT 59.720 29.630 0.00 0.00 39.06 2.43
109 110 6.760770 TCAATTCGAAAAGATTTGCCTTGTTT 59.239 30.769 0.00 0.00 39.06 2.83
110 111 6.279882 TCAATTCGAAAAGATTTGCCTTGTT 58.720 32.000 0.00 0.00 39.06 2.83
127 128 6.430925 TGCCATCTTAATTATCCCTCAATTCG 59.569 38.462 0.00 0.00 0.00 3.34
136 137 9.987272 ATTTAAAAGCTGCCATCTTAATTATCC 57.013 29.630 0.00 0.00 0.00 2.59
196 197 4.030314 AGAATTGGGATGATGATGCGAT 57.970 40.909 0.00 0.00 0.00 4.58
237 238 9.443283 CTAAAGACTGACTTGTCATTTCTTTTG 57.557 33.333 27.07 23.69 38.98 2.44
238 239 8.131731 GCTAAAGACTGACTTGTCATTTCTTTT 58.868 33.333 27.07 18.47 38.98 2.27
243 244 5.406780 CGAGCTAAAGACTGACTTGTCATTT 59.593 40.000 3.79 5.25 38.98 2.32
320 835 5.519722 ACTGTACAAAACATTTGCACTAGC 58.480 37.500 0.00 0.00 37.50 3.42
365 880 9.661563 CTAAAAAGGACATACTAACCATACACA 57.338 33.333 0.00 0.00 0.00 3.72
380 895 4.888326 ATTTGCCATGCTAAAAAGGACA 57.112 36.364 0.00 0.00 0.00 4.02
384 899 7.906527 GCAATCTTAATTTGCCATGCTAAAAAG 59.093 33.333 10.63 0.00 42.84 2.27
387 902 6.404708 TGCAATCTTAATTTGCCATGCTAAA 58.595 32.000 16.35 0.00 46.97 1.85
427 942 5.449177 CCAAACAAAAGTGACAGAGAGAACC 60.449 44.000 0.00 0.00 0.00 3.62
462 977 6.708285 AGAACTAACCATACGGAACAGAAAT 58.292 36.000 0.00 0.00 35.59 2.17
466 981 4.561606 CGAAGAACTAACCATACGGAACAG 59.438 45.833 0.00 0.00 35.59 3.16
548 1503 4.681744 GACAAAACAGTGCAAAATCCAGA 58.318 39.130 0.00 0.00 0.00 3.86
554 1509 3.917380 CAGTTCGACAAAACAGTGCAAAA 59.083 39.130 0.00 0.00 0.00 2.44
557 1512 1.400142 CCAGTTCGACAAAACAGTGCA 59.600 47.619 0.00 0.00 0.00 4.57
561 1516 4.024048 AGCAATACCAGTTCGACAAAACAG 60.024 41.667 0.00 0.00 0.00 3.16
571 1526 5.696822 CATGATGCATAGCAATACCAGTTC 58.303 41.667 0.00 0.00 43.62 3.01
600 1555 3.969287 TGCCATGATAGGAGAGCATAC 57.031 47.619 0.00 0.00 30.47 2.39
627 1582 9.064804 CGATCGTACTGTAGTTTATTACAACAA 57.935 33.333 7.03 0.00 33.44 2.83
632 1587 7.128331 TGCTCGATCGTACTGTAGTTTATTAC 58.872 38.462 15.94 0.00 0.00 1.89
633 1588 7.250445 TGCTCGATCGTACTGTAGTTTATTA 57.750 36.000 15.94 0.00 0.00 0.98
634 1589 6.127810 TGCTCGATCGTACTGTAGTTTATT 57.872 37.500 15.94 0.00 0.00 1.40
635 1590 5.746307 TGCTCGATCGTACTGTAGTTTAT 57.254 39.130 15.94 0.00 0.00 1.40
636 1591 5.550232 TTGCTCGATCGTACTGTAGTTTA 57.450 39.130 15.94 0.00 0.00 2.01
637 1592 4.430137 TTGCTCGATCGTACTGTAGTTT 57.570 40.909 15.94 0.00 0.00 2.66
638 1593 4.430137 TTTGCTCGATCGTACTGTAGTT 57.570 40.909 15.94 0.00 0.00 2.24
639 1594 4.335874 AGATTTGCTCGATCGTACTGTAGT 59.664 41.667 15.94 0.00 0.00 2.73
640 1595 4.672862 CAGATTTGCTCGATCGTACTGTAG 59.327 45.833 15.94 4.89 0.00 2.74
641 1596 4.598062 CAGATTTGCTCGATCGTACTGTA 58.402 43.478 15.94 1.27 0.00 2.74
642 1597 3.439293 CAGATTTGCTCGATCGTACTGT 58.561 45.455 15.94 0.00 0.00 3.55
643 1598 2.217393 GCAGATTTGCTCGATCGTACTG 59.783 50.000 15.94 14.29 46.95 2.74
644 1599 2.464865 GCAGATTTGCTCGATCGTACT 58.535 47.619 15.94 2.82 46.95 2.73
660 1615 7.159372 GGAGATAAATATTTTAGGACGGCAGA 58.841 38.462 5.91 0.00 0.00 4.26
679 1634 8.548880 AGCTTATTACTTACAACAGGGAGATA 57.451 34.615 0.00 0.00 0.00 1.98
685 1640 9.298774 GTACTGTAGCTTATTACTTACAACAGG 57.701 37.037 9.08 0.00 36.89 4.00
687 1642 8.729756 TCGTACTGTAGCTTATTACTTACAACA 58.270 33.333 0.00 0.00 0.00 3.33
688 1643 9.727627 ATCGTACTGTAGCTTATTACTTACAAC 57.272 33.333 0.00 0.00 0.00 3.32
690 1645 9.726232 CAATCGTACTGTAGCTTATTACTTACA 57.274 33.333 0.00 0.00 0.00 2.41
691 1646 9.941664 TCAATCGTACTGTAGCTTATTACTTAC 57.058 33.333 0.00 0.00 0.00 2.34
693 1648 7.648510 GCTCAATCGTACTGTAGCTTATTACTT 59.351 37.037 0.00 0.00 0.00 2.24
694 1649 7.140048 GCTCAATCGTACTGTAGCTTATTACT 58.860 38.462 0.00 0.00 0.00 2.24
695 1650 6.916387 TGCTCAATCGTACTGTAGCTTATTAC 59.084 38.462 0.00 0.00 0.00 1.89
696 1651 7.034685 TGCTCAATCGTACTGTAGCTTATTA 57.965 36.000 0.00 0.00 0.00 0.98
697 1652 5.902681 TGCTCAATCGTACTGTAGCTTATT 58.097 37.500 0.00 0.00 0.00 1.40
699 1654 4.976224 TGCTCAATCGTACTGTAGCTTA 57.024 40.909 0.00 0.00 0.00 3.09
701 1656 3.868757 TTGCTCAATCGTACTGTAGCT 57.131 42.857 0.00 0.00 0.00 3.32
702 1657 3.062234 GGTTTGCTCAATCGTACTGTAGC 59.938 47.826 0.00 0.00 0.00 3.58
747 1702 0.387367 AGTTAGACGTCTGCGCACAG 60.387 55.000 28.12 2.76 45.95 3.66
786 1741 3.999663 CTCTTAGGAAACCAGTTGCAGAG 59.000 47.826 0.00 0.00 0.00 3.35
789 1744 2.106511 AGCTCTTAGGAAACCAGTTGCA 59.893 45.455 0.00 0.00 0.00 4.08
792 1747 2.106511 TGCAGCTCTTAGGAAACCAGTT 59.893 45.455 0.00 0.00 0.00 3.16
793 1748 1.699634 TGCAGCTCTTAGGAAACCAGT 59.300 47.619 0.00 0.00 0.00 4.00
831 1787 3.594827 CGCGATGTCGACGAACGG 61.595 66.667 22.60 13.24 43.02 4.44
840 1796 2.440539 AAGGATATGGTCGCGATGTC 57.559 50.000 14.06 3.98 0.00 3.06
848 1804 4.583871 CAGCCATAGGAAAGGATATGGTC 58.416 47.826 11.71 5.67 46.82 4.02
852 1808 4.597004 CATGCAGCCATAGGAAAGGATAT 58.403 43.478 0.00 0.00 0.00 1.63
943 2065 4.383118 GCAGGAGGTTGGCGATATATATGT 60.383 45.833 0.00 0.00 0.00 2.29
1111 2365 2.025605 TGTATCGGGGACACTGTAGAGT 60.026 50.000 0.00 0.00 0.00 3.24
1112 2366 2.651455 TGTATCGGGGACACTGTAGAG 58.349 52.381 0.00 0.00 0.00 2.43
1113 2367 2.812836 TGTATCGGGGACACTGTAGA 57.187 50.000 0.00 0.00 0.00 2.59
1114 2368 2.545952 GCATGTATCGGGGACACTGTAG 60.546 54.545 0.00 0.00 0.00 2.74
1116 2370 0.178068 GCATGTATCGGGGACACTGT 59.822 55.000 0.00 0.00 0.00 3.55
1117 2371 0.177836 TGCATGTATCGGGGACACTG 59.822 55.000 0.00 0.00 0.00 3.66
1118 2372 1.131638 ATGCATGTATCGGGGACACT 58.868 50.000 0.00 0.00 0.00 3.55
1120 2374 1.127343 TCATGCATGTATCGGGGACA 58.873 50.000 25.43 0.00 0.00 4.02
1121 2375 2.479566 ATCATGCATGTATCGGGGAC 57.520 50.000 25.43 0.00 0.00 4.46
1122 2376 3.148412 CAAATCATGCATGTATCGGGGA 58.852 45.455 25.43 4.73 0.00 4.81
1139 2616 7.532682 AAACAAATAAAGTTGACGTGCAAAT 57.467 28.000 0.00 0.00 38.44 2.32
1163 2640 6.641474 AGTAAAAACCGAAATTCACCCAAAA 58.359 32.000 0.00 0.00 0.00 2.44
1166 2643 4.278919 GGAGTAAAAACCGAAATTCACCCA 59.721 41.667 0.00 0.00 0.00 4.51
1167 2644 4.321452 GGGAGTAAAAACCGAAATTCACCC 60.321 45.833 0.00 0.00 0.00 4.61
1168 2645 4.521639 AGGGAGTAAAAACCGAAATTCACC 59.478 41.667 0.00 0.00 0.00 4.02
1169 2646 5.700722 AGGGAGTAAAAACCGAAATTCAC 57.299 39.130 0.00 0.00 0.00 3.18
1170 2647 6.536447 AGTAGGGAGTAAAAACCGAAATTCA 58.464 36.000 0.00 0.00 0.00 2.57
1171 2648 7.444629 AAGTAGGGAGTAAAAACCGAAATTC 57.555 36.000 0.00 0.00 0.00 2.17
1172 2649 7.503230 TCAAAGTAGGGAGTAAAAACCGAAATT 59.497 33.333 0.00 0.00 0.00 1.82
1173 2650 6.999871 TCAAAGTAGGGAGTAAAAACCGAAAT 59.000 34.615 0.00 0.00 0.00 2.17
1174 2651 6.260714 GTCAAAGTAGGGAGTAAAAACCGAAA 59.739 38.462 0.00 0.00 0.00 3.46
1175 2652 5.759763 GTCAAAGTAGGGAGTAAAAACCGAA 59.240 40.000 0.00 0.00 0.00 4.30
1176 2653 5.163322 TGTCAAAGTAGGGAGTAAAAACCGA 60.163 40.000 0.00 0.00 0.00 4.69
1177 2654 5.058490 TGTCAAAGTAGGGAGTAAAAACCG 58.942 41.667 0.00 0.00 0.00 4.44
1178 2655 7.520451 AATGTCAAAGTAGGGAGTAAAAACC 57.480 36.000 0.00 0.00 0.00 3.27
1179 2656 9.811995 AAAAATGTCAAAGTAGGGAGTAAAAAC 57.188 29.630 0.00 0.00 0.00 2.43
1180 2657 9.810545 CAAAAATGTCAAAGTAGGGAGTAAAAA 57.189 29.630 0.00 0.00 0.00 1.94
1181 2658 9.191479 TCAAAAATGTCAAAGTAGGGAGTAAAA 57.809 29.630 0.00 0.00 0.00 1.52
1182 2659 8.626526 GTCAAAAATGTCAAAGTAGGGAGTAAA 58.373 33.333 0.00 0.00 0.00 2.01
1183 2660 7.041644 CGTCAAAAATGTCAAAGTAGGGAGTAA 60.042 37.037 0.00 0.00 0.00 2.24
1312 2794 5.209818 ACGATCTCAAGTTTTCACCTGTA 57.790 39.130 0.00 0.00 0.00 2.74
1342 2824 6.239217 TGTATTTGATGCTCCAGTATCAGT 57.761 37.500 7.33 4.39 45.36 3.41
1343 2825 7.066163 TGTTTGTATTTGATGCTCCAGTATCAG 59.934 37.037 7.33 0.00 45.36 2.90
1345 2827 7.066284 AGTGTTTGTATTTGATGCTCCAGTATC 59.934 37.037 0.00 0.00 37.61 2.24
1387 2874 0.249398 GTTATGCAGAGTCCGGGTGT 59.751 55.000 0.00 0.00 0.00 4.16
1388 2875 0.537188 AGTTATGCAGAGTCCGGGTG 59.463 55.000 0.00 0.00 0.00 4.61
1389 2876 2.032620 CTAGTTATGCAGAGTCCGGGT 58.967 52.381 0.00 0.00 0.00 5.28
1391 2878 4.302455 CATTCTAGTTATGCAGAGTCCGG 58.698 47.826 0.00 0.00 0.00 5.14
1392 2879 3.738282 GCATTCTAGTTATGCAGAGTCCG 59.262 47.826 20.32 0.00 45.93 4.79
1511 3000 3.742327 CGTCCGTGGTGTAGGATAGAGTA 60.742 52.174 0.00 0.00 38.97 2.59
1694 3183 1.298859 ACAAGAACTTGGCGCGGATC 61.299 55.000 8.83 0.00 44.45 3.36
1919 3408 3.440522 GTGGGTAGATTTTGTTCCTCAGC 59.559 47.826 0.00 0.00 0.00 4.26
1974 3463 1.275291 TGGTCCGAAGTTGATCCTGTC 59.725 52.381 0.00 0.00 0.00 3.51
1995 3484 4.541779 CTGATAGTAGCACTTCCATCGTC 58.458 47.826 0.00 0.00 0.00 4.20
2485 4239 2.480555 GGCGGCATCGTTGAGTTG 59.519 61.111 3.07 0.00 38.89 3.16
2550 4304 2.111043 CCTGTGAGTTGGTGCCGT 59.889 61.111 0.00 0.00 0.00 5.68
2551 4305 1.961277 GTCCTGTGAGTTGGTGCCG 60.961 63.158 0.00 0.00 0.00 5.69
2892 4687 8.642432 CCACTGAAGGAGACATTTCTACATATA 58.358 37.037 0.00 0.00 34.65 0.86
2943 4738 3.492313 GACATCCGTGAGATTTGCAAAC 58.508 45.455 15.41 8.73 30.59 2.93
3038 4846 8.443937 GCAACATATAGACCGAATATTTCCTTC 58.556 37.037 0.00 0.00 0.00 3.46
3185 5023 6.757897 TTGTCATGAGTGAAAAGAAACAGT 57.242 33.333 0.00 0.00 35.80 3.55
3216 5055 9.784531 TTGTTTGAGAGATCTCTACAGAAAAAT 57.215 29.630 25.18 0.00 43.25 1.82
3389 5240 4.889409 CAGGATTGTTGCCATACCTACAAT 59.111 41.667 0.00 0.00 41.50 2.71
3471 5337 5.012239 ACAACTACCGGAACTACTATGTGA 58.988 41.667 9.46 0.00 0.00 3.58
3991 5858 5.530171 CAGGGTTTCTGATTGATCCTATGTG 59.470 44.000 0.00 0.00 46.18 3.21
4314 6188 6.096001 ACAAGATTCTTGTGATGAATAAGGGC 59.904 38.462 27.01 0.00 34.67 5.19
4463 6363 7.386848 CCTTCAAATTGCAGACTGATGAAATTT 59.613 33.333 6.65 9.16 45.38 1.82
4469 6369 3.675228 GCCCTTCAAATTGCAGACTGATG 60.675 47.826 6.65 0.00 0.00 3.07
4525 6427 4.998672 CCTTGTATTTTGAGGTTGTCGGTA 59.001 41.667 0.00 0.00 0.00 4.02
4572 6474 3.997672 GCTTATGGCATCGACTCCT 57.002 52.632 1.65 0.00 41.35 3.69
4736 6647 2.288948 TGGGTCACTGCATTTTCATTGC 60.289 45.455 0.00 0.00 40.55 3.56
4739 6650 2.880443 AGTGGGTCACTGCATTTTCAT 58.120 42.857 0.00 0.00 43.63 2.57
5028 6948 4.036852 GCATAGAGGTTATTTTGGTGGAGC 59.963 45.833 0.00 0.00 0.00 4.70
5092 7013 0.314935 ACGGCTGCATTGTTCTTTGG 59.685 50.000 0.50 0.00 0.00 3.28
5331 7255 4.481112 GTTGCAGGGGCGATTGCG 62.481 66.667 0.00 0.00 45.35 4.85
5424 7348 4.277672 TGCTACTATCGGTGTAGAATCCAC 59.722 45.833 12.25 0.00 39.61 4.02
5470 7394 6.190346 TGGTTTGTGGTAGTATTGTAACCT 57.810 37.500 0.00 0.00 35.85 3.50
5479 7403 5.882040 TCAATGGATTGGTTTGTGGTAGTA 58.118 37.500 0.00 0.00 38.30 1.82
5488 7412 3.196254 GGCTCACATCAATGGATTGGTTT 59.804 43.478 0.00 0.00 38.30 3.27
5512 7436 7.684670 TGCTTTATCTCAAAGTAGCGTTATTG 58.315 34.615 0.00 0.00 0.00 1.90
5576 7501 5.669477 AGAAGAGAATTCATGGTGTAGCTC 58.331 41.667 8.44 0.00 0.00 4.09
5628 7590 9.944376 ACTCACTTAAGAATAGAAAGCATGTTA 57.056 29.630 10.09 0.00 0.00 2.41
5695 7657 5.716228 TCATAAACTGAGGGGAACTTACGTA 59.284 40.000 0.00 0.00 0.00 3.57
5716 7678 7.995488 ACCGGAGATAATTGAGAAAAGATTCAT 59.005 33.333 9.46 0.00 38.06 2.57
5729 7691 7.611770 TGAAGTATGGATACCGGAGATAATTG 58.388 38.462 9.46 0.00 33.79 2.32
5735 7697 5.600898 TGATTTGAAGTATGGATACCGGAGA 59.399 40.000 9.46 0.00 33.79 3.71
5754 7718 6.305272 TCTGAGTCTGAATAAGGCTGATTT 57.695 37.500 0.00 0.00 42.43 2.17
5784 7748 7.862512 TGAATGTCATATCTACAATGTGCAA 57.137 32.000 0.00 0.00 0.00 4.08
5785 7749 7.716123 TCATGAATGTCATATCTACAATGTGCA 59.284 33.333 0.00 0.00 34.28 4.57
5795 7759 8.091952 AGGCTATGATCATGAATGTCATATCT 57.908 34.615 18.72 12.80 34.28 1.98
5803 7767 6.044046 GCTCTCTAGGCTATGATCATGAATG 58.956 44.000 18.72 6.92 0.00 2.67
5809 7773 4.043435 TGGTAGCTCTCTAGGCTATGATCA 59.957 45.833 0.00 0.00 42.98 2.92
5819 7783 2.582052 CCCTGACTGGTAGCTCTCTAG 58.418 57.143 0.00 0.00 0.00 2.43
5844 7808 3.364062 CGTGATCCACTCGACTACAATC 58.636 50.000 0.00 0.00 37.64 2.67
5846 7810 1.471287 CCGTGATCCACTCGACTACAA 59.529 52.381 0.00 0.00 37.64 2.41
5847 7811 1.092348 CCGTGATCCACTCGACTACA 58.908 55.000 0.00 0.00 37.64 2.74
5848 7812 1.331138 CTCCGTGATCCACTCGACTAC 59.669 57.143 0.00 0.00 37.64 2.73
5850 7814 1.032657 CCTCCGTGATCCACTCGACT 61.033 60.000 0.00 0.00 37.64 4.18
5851 7815 1.313812 ACCTCCGTGATCCACTCGAC 61.314 60.000 0.00 0.00 37.64 4.20
5853 7817 1.139734 CACCTCCGTGATCCACTCG 59.860 63.158 0.00 0.00 43.14 4.18
5854 7818 0.970937 TCCACCTCCGTGATCCACTC 60.971 60.000 0.00 0.00 43.14 3.51
5863 7864 0.981183 TAAAGTGCATCCACCTCCGT 59.019 50.000 0.00 0.00 43.09 4.69
5864 7865 1.656652 CTAAAGTGCATCCACCTCCG 58.343 55.000 0.00 0.00 43.09 4.63
5872 7873 1.398390 CTTGTCCGCCTAAAGTGCATC 59.602 52.381 0.00 0.00 0.00 3.91
5878 7879 1.270625 TGTGGTCTTGTCCGCCTAAAG 60.271 52.381 0.00 0.00 37.20 1.85
5909 7910 3.780804 TCCTTTTCCCACGAATTCTCA 57.219 42.857 3.52 0.00 0.00 3.27
5915 7916 1.611491 GCACATTCCTTTTCCCACGAA 59.389 47.619 0.00 0.00 0.00 3.85
5936 7937 0.882927 TGGAAACCGCTTTGTCGAGG 60.883 55.000 0.00 0.00 0.00 4.63
5940 7941 1.792367 GCAATTGGAAACCGCTTTGTC 59.208 47.619 7.72 0.00 0.00 3.18
5943 7944 1.137872 TGTGCAATTGGAAACCGCTTT 59.862 42.857 7.72 0.00 0.00 3.51
5978 7979 7.901029 TGATATCCCATCTCAAGTAATCTGAC 58.099 38.462 0.00 0.00 0.00 3.51
5986 7987 4.774726 ACGCTATGATATCCCATCTCAAGT 59.225 41.667 0.00 0.00 0.00 3.16
5989 7990 4.089361 ACACGCTATGATATCCCATCTCA 58.911 43.478 0.00 0.00 0.00 3.27
5992 7993 4.456280 TGACACGCTATGATATCCCATC 57.544 45.455 0.00 0.00 0.00 3.51
6000 8001 4.745125 CCGAATTAGTTGACACGCTATGAT 59.255 41.667 0.00 0.00 0.00 2.45
6002 8003 3.302480 GCCGAATTAGTTGACACGCTATG 60.302 47.826 0.00 0.00 0.00 2.23
6061 8062 4.685169 AACGCAACATCATTTACAGAGG 57.315 40.909 0.00 0.00 0.00 3.69
6075 8076 3.361443 CGTTGGCTTCTAACGCAAC 57.639 52.632 2.79 0.00 43.38 4.17
6106 8107 5.215160 GGTTTAGTGAAATGTCAGCACTTG 58.785 41.667 10.03 0.00 42.40 3.16
6117 8118 4.870123 TGCTTGCATGGTTTAGTGAAAT 57.130 36.364 1.34 0.00 0.00 2.17
6125 8126 5.367302 AGTTAAACATTGCTTGCATGGTTT 58.633 33.333 20.45 20.45 33.48 3.27
6138 8139 5.106317 CGTATGCCAGGTGAAGTTAAACATT 60.106 40.000 0.00 0.00 0.00 2.71
6161 8162 6.371825 AGAAGCAACTTTTCCCTCTTAATACG 59.628 38.462 0.00 0.00 0.00 3.06
6170 8171 7.724061 TGTAGAATAAAGAAGCAACTTTTCCCT 59.276 33.333 12.03 9.44 40.09 4.20
6179 8180 7.994425 TGGTTGATGTAGAATAAAGAAGCAA 57.006 32.000 0.00 0.00 0.00 3.91
6192 8193 3.190327 TGTTGGCGATTTGGTTGATGTAG 59.810 43.478 0.00 0.00 0.00 2.74
6212 8213 1.604693 GCAGTAGCACGGTTACTGTGT 60.605 52.381 23.14 13.50 46.16 3.72
6223 8224 2.611518 CCACTTGAGTAGCAGTAGCAC 58.388 52.381 0.00 0.00 45.49 4.40
6230 8231 0.321034 CAGCTGCCACTTGAGTAGCA 60.321 55.000 0.00 4.30 40.17 3.49
6240 8241 2.159327 AAAGAATTTGCAGCTGCCAC 57.841 45.000 34.64 20.01 36.60 5.01
6271 8272 2.668144 ACCCTCATTTTCGGGACAAA 57.332 45.000 0.58 0.00 43.44 2.83
6274 8275 2.362736 GGTAACCCTCATTTTCGGGAC 58.637 52.381 0.58 0.00 43.44 4.46
6297 8298 2.224257 TGCATCGCATTATGTAGAGCCA 60.224 45.455 0.00 0.00 31.71 4.75
6304 8306 2.485426 GGCTATGTGCATCGCATTATGT 59.515 45.455 10.17 0.00 41.91 2.29
6308 8310 1.612676 ATGGCTATGTGCATCGCATT 58.387 45.000 10.17 0.00 41.91 3.56
6310 8312 1.391577 AAATGGCTATGTGCATCGCA 58.608 45.000 10.17 0.00 45.15 5.10
6336 8338 6.154534 ACTGAGGGCAAAAAGATAATTAACCC 59.845 38.462 0.00 0.00 34.91 4.11
6337 8339 7.035612 CACTGAGGGCAAAAAGATAATTAACC 58.964 38.462 0.00 0.00 0.00 2.85
6338 8340 7.035612 CCACTGAGGGCAAAAAGATAATTAAC 58.964 38.462 0.00 0.00 0.00 2.01
6339 8341 6.723977 ACCACTGAGGGCAAAAAGATAATTAA 59.276 34.615 0.00 0.00 43.89 1.40
6340 8342 6.252995 ACCACTGAGGGCAAAAAGATAATTA 58.747 36.000 0.00 0.00 43.89 1.40
6341 8343 5.086621 ACCACTGAGGGCAAAAAGATAATT 58.913 37.500 0.00 0.00 43.89 1.40
6342 8344 4.677182 ACCACTGAGGGCAAAAAGATAAT 58.323 39.130 0.00 0.00 43.89 1.28
6343 8345 4.112634 ACCACTGAGGGCAAAAAGATAA 57.887 40.909 0.00 0.00 43.89 1.75
6344 8346 3.806949 ACCACTGAGGGCAAAAAGATA 57.193 42.857 0.00 0.00 43.89 1.98
6345 8347 2.683211 ACCACTGAGGGCAAAAAGAT 57.317 45.000 0.00 0.00 43.89 2.40
6346 8348 3.561313 GGATACCACTGAGGGCAAAAAGA 60.561 47.826 0.00 0.00 43.89 2.52
6347 8349 2.755103 GGATACCACTGAGGGCAAAAAG 59.245 50.000 0.00 0.00 43.89 2.27
6348 8350 2.109128 TGGATACCACTGAGGGCAAAAA 59.891 45.455 0.00 0.00 43.89 1.94
6349 8351 1.707989 TGGATACCACTGAGGGCAAAA 59.292 47.619 0.00 0.00 43.89 2.44
6350 8352 1.367346 TGGATACCACTGAGGGCAAA 58.633 50.000 0.00 0.00 43.89 3.68
6351 8353 1.212688 CATGGATACCACTGAGGGCAA 59.787 52.381 0.00 0.00 43.89 4.52
6352 8354 0.839277 CATGGATACCACTGAGGGCA 59.161 55.000 0.00 0.00 43.89 5.36
6353 8355 0.839946 ACATGGATACCACTGAGGGC 59.160 55.000 0.00 0.00 43.89 5.19
6354 8356 1.475751 GCACATGGATACCACTGAGGG 60.476 57.143 0.00 0.00 43.89 4.30
6355 8357 1.487976 AGCACATGGATACCACTGAGG 59.512 52.381 0.00 0.00 45.67 3.86
6356 8358 2.169144 TGAGCACATGGATACCACTGAG 59.831 50.000 0.00 0.00 35.80 3.35
6357 8359 2.169144 CTGAGCACATGGATACCACTGA 59.831 50.000 0.00 0.00 35.80 3.41
6358 8360 2.093288 ACTGAGCACATGGATACCACTG 60.093 50.000 0.00 0.00 35.80 3.66
6359 8361 2.191400 ACTGAGCACATGGATACCACT 58.809 47.619 0.00 0.00 35.80 4.00
6360 8362 2.698855 ACTGAGCACATGGATACCAC 57.301 50.000 0.00 0.00 35.80 4.16
6361 8363 3.719268 AAACTGAGCACATGGATACCA 57.281 42.857 0.00 0.00 38.19 3.25
6362 8364 3.428045 GCAAAACTGAGCACATGGATACC 60.428 47.826 0.00 0.00 0.00 2.73
6363 8365 3.428045 GGCAAAACTGAGCACATGGATAC 60.428 47.826 0.00 0.00 0.00 2.24
6364 8366 2.754552 GGCAAAACTGAGCACATGGATA 59.245 45.455 0.00 0.00 0.00 2.59
6365 8367 1.547372 GGCAAAACTGAGCACATGGAT 59.453 47.619 0.00 0.00 0.00 3.41
6366 8368 0.961019 GGCAAAACTGAGCACATGGA 59.039 50.000 0.00 0.00 0.00 3.41
6367 8369 0.037975 GGGCAAAACTGAGCACATGG 60.038 55.000 0.00 0.00 33.42 3.66
6368 8370 0.963962 AGGGCAAAACTGAGCACATG 59.036 50.000 0.00 0.00 36.38 3.21
6369 8371 1.251251 GAGGGCAAAACTGAGCACAT 58.749 50.000 0.00 0.00 36.38 3.21
6370 8372 0.106769 TGAGGGCAAAACTGAGCACA 60.107 50.000 0.00 0.00 36.38 4.57
6371 8373 1.032014 TTGAGGGCAAAACTGAGCAC 58.968 50.000 0.00 0.00 0.00 4.40
6372 8374 1.999648 ATTGAGGGCAAAACTGAGCA 58.000 45.000 0.00 0.00 37.59 4.26
6373 8375 2.036346 ACAATTGAGGGCAAAACTGAGC 59.964 45.455 13.59 0.00 37.59 4.26
6374 8376 3.318839 TCACAATTGAGGGCAAAACTGAG 59.681 43.478 13.59 0.00 37.59 3.35
6375 8377 3.295093 TCACAATTGAGGGCAAAACTGA 58.705 40.909 13.59 0.00 37.59 3.41
6376 8378 3.731652 TCACAATTGAGGGCAAAACTG 57.268 42.857 13.59 0.00 37.59 3.16
6377 8379 4.559300 CGATTCACAATTGAGGGCAAAACT 60.559 41.667 13.59 0.00 37.59 2.66
6378 8380 3.674753 CGATTCACAATTGAGGGCAAAAC 59.325 43.478 13.59 0.00 37.59 2.43
6379 8381 3.320541 ACGATTCACAATTGAGGGCAAAA 59.679 39.130 13.59 0.00 37.59 2.44
6380 8382 2.890311 ACGATTCACAATTGAGGGCAAA 59.110 40.909 13.59 0.00 37.59 3.68
6381 8383 2.228582 CACGATTCACAATTGAGGGCAA 59.771 45.455 13.59 0.00 38.60 4.52
6382 8384 1.811965 CACGATTCACAATTGAGGGCA 59.188 47.619 13.59 0.00 31.71 5.36
6383 8385 1.468054 GCACGATTCACAATTGAGGGC 60.468 52.381 13.59 5.02 31.71 5.19
6384 8386 2.086869 AGCACGATTCACAATTGAGGG 58.913 47.619 13.59 1.26 31.71 4.30
6385 8387 2.743664 TGAGCACGATTCACAATTGAGG 59.256 45.455 13.59 3.94 31.71 3.86
6386 8388 3.434641 ACTGAGCACGATTCACAATTGAG 59.565 43.478 13.59 4.14 31.71 3.02
6387 8389 3.402110 ACTGAGCACGATTCACAATTGA 58.598 40.909 13.59 0.00 0.00 2.57
6388 8390 3.818961 ACTGAGCACGATTCACAATTG 57.181 42.857 3.24 3.24 0.00 2.32
6389 8391 4.836125 AAACTGAGCACGATTCACAATT 57.164 36.364 0.00 0.00 0.00 2.32
6390 8392 4.539870 CAAAACTGAGCACGATTCACAAT 58.460 39.130 0.00 0.00 0.00 2.71
6391 8393 3.791789 GCAAAACTGAGCACGATTCACAA 60.792 43.478 0.00 0.00 0.00 3.33
6392 8394 2.286950 GCAAAACTGAGCACGATTCACA 60.287 45.455 0.00 0.00 0.00 3.58
6393 8395 2.310577 GCAAAACTGAGCACGATTCAC 58.689 47.619 0.00 0.00 0.00 3.18
6394 8396 1.266718 GGCAAAACTGAGCACGATTCA 59.733 47.619 0.00 0.00 0.00 2.57
6395 8397 1.401539 GGGCAAAACTGAGCACGATTC 60.402 52.381 0.00 0.00 0.00 2.52
6396 8398 0.598065 GGGCAAAACTGAGCACGATT 59.402 50.000 0.00 0.00 0.00 3.34
6397 8399 1.244019 GGGGCAAAACTGAGCACGAT 61.244 55.000 0.00 0.00 34.20 3.73
6398 8400 1.896660 GGGGCAAAACTGAGCACGA 60.897 57.895 0.00 0.00 34.20 4.35
6399 8401 0.605319 TAGGGGCAAAACTGAGCACG 60.605 55.000 0.00 0.00 34.20 5.34
6400 8402 1.168714 CTAGGGGCAAAACTGAGCAC 58.831 55.000 0.00 0.00 0.00 4.40
6401 8403 1.064003 TCTAGGGGCAAAACTGAGCA 58.936 50.000 0.00 0.00 0.00 4.26
6402 8404 1.003696 AGTCTAGGGGCAAAACTGAGC 59.996 52.381 0.00 0.00 0.00 4.26
6403 8405 2.039084 ACAGTCTAGGGGCAAAACTGAG 59.961 50.000 11.29 0.00 39.72 3.35
6404 8406 2.054799 ACAGTCTAGGGGCAAAACTGA 58.945 47.619 11.29 0.00 39.72 3.41
6405 8407 2.154462 CACAGTCTAGGGGCAAAACTG 58.846 52.381 4.43 4.43 42.33 3.16
6406 8408 1.774856 ACACAGTCTAGGGGCAAAACT 59.225 47.619 0.00 0.00 0.00 2.66
6407 8409 1.880027 CACACAGTCTAGGGGCAAAAC 59.120 52.381 0.00 0.00 0.00 2.43
6408 8410 1.817740 GCACACAGTCTAGGGGCAAAA 60.818 52.381 0.00 0.00 0.00 2.44
6409 8411 0.250727 GCACACAGTCTAGGGGCAAA 60.251 55.000 0.00 0.00 0.00 3.68
6410 8412 1.374947 GCACACAGTCTAGGGGCAA 59.625 57.895 0.00 0.00 0.00 4.52
6411 8413 1.414866 TTGCACACAGTCTAGGGGCA 61.415 55.000 0.00 0.00 0.00 5.36
6412 8414 0.955919 GTTGCACACAGTCTAGGGGC 60.956 60.000 0.00 0.00 0.00 5.80
6413 8415 0.687354 AGTTGCACACAGTCTAGGGG 59.313 55.000 0.00 0.00 0.00 4.79
6414 8416 2.563179 AGTAGTTGCACACAGTCTAGGG 59.437 50.000 0.00 0.00 0.00 3.53
6415 8417 3.944055 AGTAGTTGCACACAGTCTAGG 57.056 47.619 0.00 0.00 0.00 3.02
6416 8418 6.030849 GTCATAGTAGTTGCACACAGTCTAG 58.969 44.000 0.00 0.00 0.00 2.43
6417 8419 5.391629 CGTCATAGTAGTTGCACACAGTCTA 60.392 44.000 0.00 0.00 0.00 2.59
6418 8420 4.616143 CGTCATAGTAGTTGCACACAGTCT 60.616 45.833 0.00 0.00 0.00 3.24
6419 8421 3.608506 CGTCATAGTAGTTGCACACAGTC 59.391 47.826 0.00 0.00 0.00 3.51
6420 8422 3.254903 TCGTCATAGTAGTTGCACACAGT 59.745 43.478 0.00 0.00 0.00 3.55
6421 8423 3.833442 TCGTCATAGTAGTTGCACACAG 58.167 45.455 0.00 0.00 0.00 3.66
6422 8424 3.366985 CCTCGTCATAGTAGTTGCACACA 60.367 47.826 0.00 0.00 0.00 3.72
6423 8425 3.179830 CCTCGTCATAGTAGTTGCACAC 58.820 50.000 0.00 0.00 0.00 3.82
6424 8426 2.416836 GCCTCGTCATAGTAGTTGCACA 60.417 50.000 0.00 0.00 0.00 4.57
6425 8427 2.194271 GCCTCGTCATAGTAGTTGCAC 58.806 52.381 0.00 0.00 0.00 4.57
6426 8428 1.136305 GGCCTCGTCATAGTAGTTGCA 59.864 52.381 0.00 0.00 0.00 4.08
6427 8429 1.136305 TGGCCTCGTCATAGTAGTTGC 59.864 52.381 3.32 0.00 0.00 4.17
6428 8430 3.520290 TTGGCCTCGTCATAGTAGTTG 57.480 47.619 3.32 0.00 0.00 3.16
6429 8431 3.259876 TGTTTGGCCTCGTCATAGTAGTT 59.740 43.478 3.32 0.00 0.00 2.24
6430 8432 2.829720 TGTTTGGCCTCGTCATAGTAGT 59.170 45.455 3.32 0.00 0.00 2.73
6431 8433 3.448686 CTGTTTGGCCTCGTCATAGTAG 58.551 50.000 3.32 0.00 0.00 2.57
6432 8434 2.167693 CCTGTTTGGCCTCGTCATAGTA 59.832 50.000 3.32 0.00 0.00 1.82
6433 8435 1.066143 CCTGTTTGGCCTCGTCATAGT 60.066 52.381 3.32 0.00 0.00 2.12
6434 8436 1.656652 CCTGTTTGGCCTCGTCATAG 58.343 55.000 3.32 0.00 0.00 2.23
6435 8437 3.853104 CCTGTTTGGCCTCGTCATA 57.147 52.632 3.32 0.00 0.00 2.15
6436 8438 4.722193 CCTGTTTGGCCTCGTCAT 57.278 55.556 3.32 0.00 0.00 3.06
6448 8450 2.435372 TGGACTCAAAACTGCCTGTT 57.565 45.000 0.00 0.00 41.29 3.16
6449 8451 2.664402 ATGGACTCAAAACTGCCTGT 57.336 45.000 0.00 0.00 0.00 4.00
6450 8452 2.229784 GGAATGGACTCAAAACTGCCTG 59.770 50.000 0.00 0.00 0.00 4.85
6451 8453 2.519013 GGAATGGACTCAAAACTGCCT 58.481 47.619 0.00 0.00 0.00 4.75
6452 8454 1.200020 CGGAATGGACTCAAAACTGCC 59.800 52.381 0.00 0.00 0.00 4.85
6453 8455 1.880027 ACGGAATGGACTCAAAACTGC 59.120 47.619 0.00 0.00 0.00 4.40
6454 8456 3.403038 AGACGGAATGGACTCAAAACTG 58.597 45.455 0.00 0.00 0.00 3.16
6455 8457 3.771577 AGACGGAATGGACTCAAAACT 57.228 42.857 0.00 0.00 0.00 2.66
6456 8458 5.163754 CCAATAGACGGAATGGACTCAAAAC 60.164 44.000 0.00 0.00 34.82 2.43
6457 8459 4.941263 CCAATAGACGGAATGGACTCAAAA 59.059 41.667 0.00 0.00 34.82 2.44
6458 8460 4.513442 CCAATAGACGGAATGGACTCAAA 58.487 43.478 0.00 0.00 34.82 2.69
6459 8461 3.681594 GCCAATAGACGGAATGGACTCAA 60.682 47.826 0.00 0.00 34.82 3.02
6460 8462 2.158957 GCCAATAGACGGAATGGACTCA 60.159 50.000 0.00 0.00 34.82 3.41
6461 8463 2.484889 GCCAATAGACGGAATGGACTC 58.515 52.381 0.00 0.00 34.82 3.36
6462 8464 1.202533 CGCCAATAGACGGAATGGACT 60.203 52.381 0.00 0.00 34.82 3.85
6463 8465 1.217882 CGCCAATAGACGGAATGGAC 58.782 55.000 0.00 0.00 34.82 4.02
6464 8466 0.828022 ACGCCAATAGACGGAATGGA 59.172 50.000 0.00 0.00 34.82 3.41
6465 8467 1.663695 AACGCCAATAGACGGAATGG 58.336 50.000 0.00 0.00 36.00 3.16
6466 8468 3.245284 CACTAACGCCAATAGACGGAATG 59.755 47.826 0.00 0.00 0.00 2.67
6467 8469 3.454375 CACTAACGCCAATAGACGGAAT 58.546 45.455 0.00 0.00 0.00 3.01
6468 8470 2.417651 CCACTAACGCCAATAGACGGAA 60.418 50.000 0.00 0.00 0.00 4.30
6469 8471 1.135527 CCACTAACGCCAATAGACGGA 59.864 52.381 0.00 0.00 0.00 4.69
6470 8472 1.134907 ACCACTAACGCCAATAGACGG 60.135 52.381 0.00 0.00 0.00 4.79
6471 8473 2.288961 ACCACTAACGCCAATAGACG 57.711 50.000 0.00 0.00 0.00 4.18
6472 8474 4.110482 CACTACCACTAACGCCAATAGAC 58.890 47.826 0.00 0.00 0.00 2.59
6473 8475 3.131577 CCACTACCACTAACGCCAATAGA 59.868 47.826 0.00 0.00 0.00 1.98
6474 8476 3.454375 CCACTACCACTAACGCCAATAG 58.546 50.000 0.00 0.00 0.00 1.73
6475 8477 2.168936 CCCACTACCACTAACGCCAATA 59.831 50.000 0.00 0.00 0.00 1.90
6476 8478 1.065709 CCCACTACCACTAACGCCAAT 60.066 52.381 0.00 0.00 0.00 3.16
6477 8479 0.322322 CCCACTACCACTAACGCCAA 59.678 55.000 0.00 0.00 0.00 4.52
6478 8480 0.832983 ACCCACTACCACTAACGCCA 60.833 55.000 0.00 0.00 0.00 5.69
6479 8481 0.108472 GACCCACTACCACTAACGCC 60.108 60.000 0.00 0.00 0.00 5.68
6480 8482 0.108472 GGACCCACTACCACTAACGC 60.108 60.000 0.00 0.00 0.00 4.84
6481 8483 0.171903 CGGACCCACTACCACTAACG 59.828 60.000 0.00 0.00 0.00 3.18
6482 8484 0.533951 CCGGACCCACTACCACTAAC 59.466 60.000 0.00 0.00 0.00 2.34
6483 8485 0.409092 TCCGGACCCACTACCACTAA 59.591 55.000 0.00 0.00 0.00 2.24
6484 8486 0.033796 CTCCGGACCCACTACCACTA 60.034 60.000 0.00 0.00 0.00 2.74
6485 8487 1.305046 CTCCGGACCCACTACCACT 60.305 63.158 0.00 0.00 0.00 4.00
6486 8488 3.015312 GCTCCGGACCCACTACCAC 62.015 68.421 0.00 0.00 0.00 4.16
6487 8489 2.682494 GCTCCGGACCCACTACCA 60.682 66.667 0.00 0.00 0.00 3.25
6488 8490 1.551019 AAAGCTCCGGACCCACTACC 61.551 60.000 0.00 0.00 0.00 3.18
6489 8491 1.134877 GTAAAGCTCCGGACCCACTAC 60.135 57.143 0.00 0.00 0.00 2.73
6490 8492 1.188863 GTAAAGCTCCGGACCCACTA 58.811 55.000 0.00 0.00 0.00 2.74
6491 8493 0.834687 TGTAAAGCTCCGGACCCACT 60.835 55.000 0.00 0.00 0.00 4.00
6492 8494 0.672711 GTGTAAAGCTCCGGACCCAC 60.673 60.000 0.00 0.00 0.00 4.61
6493 8495 1.675219 GTGTAAAGCTCCGGACCCA 59.325 57.895 0.00 0.00 0.00 4.51
6494 8496 1.447314 CGTGTAAAGCTCCGGACCC 60.447 63.158 0.00 0.00 0.00 4.46
6495 8497 1.012486 CACGTGTAAAGCTCCGGACC 61.012 60.000 7.58 0.00 0.00 4.46
6496 8498 1.012486 CCACGTGTAAAGCTCCGGAC 61.012 60.000 15.65 0.00 0.00 4.79
6497 8499 1.290955 CCACGTGTAAAGCTCCGGA 59.709 57.895 15.65 2.93 0.00 5.14
6498 8500 1.740296 CCCACGTGTAAAGCTCCGG 60.740 63.158 15.65 0.00 0.00 5.14
6499 8501 1.012486 GTCCCACGTGTAAAGCTCCG 61.012 60.000 15.65 0.00 0.00 4.63
6500 8502 0.672711 GGTCCCACGTGTAAAGCTCC 60.673 60.000 15.65 3.40 0.00 4.70
6501 8503 1.012486 CGGTCCCACGTGTAAAGCTC 61.012 60.000 15.65 0.00 0.00 4.09
6502 8504 1.005394 CGGTCCCACGTGTAAAGCT 60.005 57.895 15.65 0.00 0.00 3.74
6503 8505 2.674084 GCGGTCCCACGTGTAAAGC 61.674 63.158 15.65 9.44 35.98 3.51
6504 8506 2.377310 CGCGGTCCCACGTGTAAAG 61.377 63.158 15.65 2.97 39.35 1.85
6505 8507 2.356075 CGCGGTCCCACGTGTAAA 60.356 61.111 15.65 0.00 39.35 2.01


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.