Multiple sequence alignment - TraesCS4B01G007600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G007600 chr4B 100.000 3383 0 0 1 3383 5016368 5012986 0.000000e+00 6248
1 TraesCS4B01G007600 chr4B 81.371 2480 421 24 42 2507 5197429 5194977 0.000000e+00 1982
2 TraesCS4B01G007600 chr4B 82.432 2146 291 45 651 2759 4997869 4995773 0.000000e+00 1796
3 TraesCS4B01G007600 chr4B 82.137 1282 197 18 1354 2633 5080444 5079193 0.000000e+00 1070
4 TraesCS4B01G007600 chr4B 81.240 1274 210 25 42 1301 5081724 5080466 0.000000e+00 1002
5 TraesCS4B01G007600 chr4B 85.214 514 69 5 42 553 4998403 4997895 3.870000e-144 521
6 TraesCS4B01G007600 chr4B 82.682 537 85 6 44 576 4718722 4719254 1.420000e-128 470
7 TraesCS4B01G007600 chr4B 89.527 296 26 4 2815 3106 4995595 4995301 1.480000e-98 370
8 TraesCS4B01G007600 chr4A 82.720 2529 390 33 42 2559 601017456 601014964 0.000000e+00 2206
9 TraesCS4B01G007600 chr4A 82.104 2509 401 37 42 2527 601008726 601006243 0.000000e+00 2102
10 TraesCS4B01G007600 chr4A 81.391 2617 424 46 42 2637 600976109 600973535 0.000000e+00 2076
11 TraesCS4B01G007600 chr4A 80.399 2607 444 46 42 2633 600931419 600928865 0.000000e+00 1921
12 TraesCS4B01G007600 chr4A 83.769 536 79 6 51 582 600914248 600913717 5.040000e-138 501
13 TraesCS4B01G007600 chr4A 88.506 87 9 1 2477 2562 600911951 600911865 1.660000e-18 104
14 TraesCS4B01G007600 chr4D 82.101 2408 378 38 42 2429 3841373 3838999 0.000000e+00 2010
15 TraesCS4B01G007600 chr4D 81.916 2422 379 47 42 2430 3692502 3694897 0.000000e+00 1991
16 TraesCS4B01G007600 chr4D 82.653 196 22 5 2434 2629 3694957 3695140 2.700000e-36 163
17 TraesCS4B01G007600 chr4D 88.660 97 8 3 2477 2570 3838992 3838896 7.670000e-22 115
18 TraesCS4B01G007600 chr7A 75.178 1402 292 36 689 2078 736309742 736308385 8.030000e-171 610
19 TraesCS4B01G007600 chr7B 74.077 1219 252 41 735 1938 744215899 744214730 3.100000e-120 442


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G007600 chr4B 5012986 5016368 3382 True 6248.000000 6248 100.000000 1 3383 1 chr4B.!!$R1 3382
1 TraesCS4B01G007600 chr4B 5194977 5197429 2452 True 1982.000000 1982 81.371000 42 2507 1 chr4B.!!$R2 2465
2 TraesCS4B01G007600 chr4B 5079193 5081724 2531 True 1036.000000 1070 81.688500 42 2633 2 chr4B.!!$R4 2591
3 TraesCS4B01G007600 chr4B 4995301 4998403 3102 True 895.666667 1796 85.724333 42 3106 3 chr4B.!!$R3 3064
4 TraesCS4B01G007600 chr4B 4718722 4719254 532 False 470.000000 470 82.682000 44 576 1 chr4B.!!$F1 532
5 TraesCS4B01G007600 chr4A 601014964 601017456 2492 True 2206.000000 2206 82.720000 42 2559 1 chr4A.!!$R4 2517
6 TraesCS4B01G007600 chr4A 601006243 601008726 2483 True 2102.000000 2102 82.104000 42 2527 1 chr4A.!!$R3 2485
7 TraesCS4B01G007600 chr4A 600973535 600976109 2574 True 2076.000000 2076 81.391000 42 2637 1 chr4A.!!$R2 2595
8 TraesCS4B01G007600 chr4A 600928865 600931419 2554 True 1921.000000 1921 80.399000 42 2633 1 chr4A.!!$R1 2591
9 TraesCS4B01G007600 chr4A 600911865 600914248 2383 True 302.500000 501 86.137500 51 2562 2 chr4A.!!$R5 2511
10 TraesCS4B01G007600 chr4D 3692502 3695140 2638 False 1077.000000 1991 82.284500 42 2629 2 chr4D.!!$F1 2587
11 TraesCS4B01G007600 chr4D 3838896 3841373 2477 True 1062.500000 2010 85.380500 42 2570 2 chr4D.!!$R1 2528
12 TraesCS4B01G007600 chr7A 736308385 736309742 1357 True 610.000000 610 75.178000 689 2078 1 chr7A.!!$R1 1389
13 TraesCS4B01G007600 chr7B 744214730 744215899 1169 True 442.000000 442 74.077000 735 1938 1 chr7B.!!$R1 1203

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
904 923 1.39839 GACGGCAGTCCAACATTGATC 59.602 52.381 5.6 0.0 41.41 2.92 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2685 2845 0.035881 TCCTTCCTGAGCACAAGCAG 59.964 55.0 0.0 0.0 45.49 4.24 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 5.922053 CTTCTGTGATGATGAGGGTAATCA 58.078 41.667 0.00 0.00 38.37 2.57
24 25 5.955961 TCTGTGATGATGAGGGTAATCAA 57.044 39.130 0.00 0.00 37.58 2.57
25 26 5.674525 TCTGTGATGATGAGGGTAATCAAC 58.325 41.667 0.00 0.00 37.58 3.18
26 27 5.189539 TCTGTGATGATGAGGGTAATCAACA 59.810 40.000 0.00 0.00 37.58 3.33
27 28 6.005066 TGTGATGATGAGGGTAATCAACAT 57.995 37.500 0.00 0.00 43.10 2.71
28 29 5.824097 TGTGATGATGAGGGTAATCAACATG 59.176 40.000 4.48 0.00 41.24 3.21
29 30 6.057533 GTGATGATGAGGGTAATCAACATGA 58.942 40.000 0.00 0.00 41.24 3.07
30 31 6.204301 GTGATGATGAGGGTAATCAACATGAG 59.796 42.308 0.00 0.00 41.24 2.90
31 32 4.454678 TGATGAGGGTAATCAACATGAGC 58.545 43.478 0.00 0.00 31.17 4.26
32 33 3.281727 TGAGGGTAATCAACATGAGCC 57.718 47.619 0.00 0.00 0.00 4.70
33 34 2.213499 GAGGGTAATCAACATGAGCCG 58.787 52.381 0.00 0.00 34.59 5.52
34 35 1.559682 AGGGTAATCAACATGAGCCGT 59.440 47.619 0.00 0.00 34.59 5.68
35 36 2.769663 AGGGTAATCAACATGAGCCGTA 59.230 45.455 0.00 0.00 34.59 4.02
36 37 2.870411 GGGTAATCAACATGAGCCGTAC 59.130 50.000 0.00 0.00 0.00 3.67
37 38 3.527533 GGTAATCAACATGAGCCGTACA 58.472 45.455 0.00 0.00 0.00 2.90
38 39 3.308866 GGTAATCAACATGAGCCGTACAC 59.691 47.826 0.00 0.00 0.00 2.90
39 40 3.334583 AATCAACATGAGCCGTACACT 57.665 42.857 0.00 0.00 0.00 3.55
40 41 2.363788 TCAACATGAGCCGTACACTC 57.636 50.000 0.00 6.05 34.62 3.51
46 47 1.557099 TGAGCCGTACACTCTGGATT 58.443 50.000 12.65 0.00 35.12 3.01
93 94 3.181451 TGTTGAGCCATCTTGACTTGAGT 60.181 43.478 0.00 0.00 0.00 3.41
262 275 9.706691 TTGATCTATCAGAAAACTCGTTTAACT 57.293 29.630 0.00 0.00 38.19 2.24
276 289 7.097192 ACTCGTTTAACTCATCATTAGAGCAA 58.903 34.615 0.00 0.00 36.58 3.91
292 308 3.070015 AGAGCAAAGTTGGTTTTGGGATG 59.930 43.478 0.00 0.00 39.30 3.51
300 316 3.025322 TGGTTTTGGGATGTCACAAGT 57.975 42.857 0.00 0.00 40.78 3.16
350 366 2.374504 ACTGGCATGGATCTATTCCTGG 59.625 50.000 16.09 8.81 45.68 4.45
383 399 6.349363 GGAAACATGACATCCCTTCAAGTAAC 60.349 42.308 0.00 0.00 0.00 2.50
397 413 6.206634 CCTTCAAGTAACAGATTTTAGTGGCA 59.793 38.462 0.00 0.00 0.00 4.92
398 414 7.255451 CCTTCAAGTAACAGATTTTAGTGGCAA 60.255 37.037 0.00 0.00 0.00 4.52
399 415 7.759489 TCAAGTAACAGATTTTAGTGGCAAT 57.241 32.000 0.00 0.00 0.00 3.56
501 520 6.782000 ACATTAATGCAAGCATAGGGGAATTA 59.218 34.615 15.48 0.00 35.31 1.40
519 538 5.010012 GGAATTAATGGATCGATTGCCAAGT 59.990 40.000 12.73 4.43 37.78 3.16
621 640 5.440234 TGACTAGTCTCAGTGTTCTTGAC 57.560 43.478 23.01 0.00 0.00 3.18
697 716 4.696479 AACTTGACAGTGTTGGATCTCT 57.304 40.909 0.00 0.00 31.60 3.10
712 731 6.798427 TGGATCTCTGCTACAATAAACTCT 57.202 37.500 0.00 0.00 0.00 3.24
804 823 7.840931 ACTTCTTGAAAATGGATATTGAACCC 58.159 34.615 0.00 0.00 0.00 4.11
831 850 5.812286 TGGGTTCCTCCATTTAGACTAAAC 58.188 41.667 9.82 0.00 38.11 2.01
833 852 6.114089 GGGTTCCTCCATTTAGACTAAACTC 58.886 44.000 9.82 0.00 38.11 3.01
834 853 6.070136 GGGTTCCTCCATTTAGACTAAACTCT 60.070 42.308 9.82 0.00 38.11 3.24
858 877 7.712639 TCTTTATTCCTTGAGTCATGCATAGTC 59.287 37.037 0.00 1.67 0.00 2.59
892 911 1.450312 GCATGGCTTAGACGGCAGT 60.450 57.895 0.00 0.00 43.02 4.40
904 923 1.398390 GACGGCAGTCCAACATTGATC 59.602 52.381 5.60 0.00 41.41 2.92
906 925 1.811965 CGGCAGTCCAACATTGATCAA 59.188 47.619 11.26 11.26 0.00 2.57
916 935 5.827267 TCCAACATTGATCAACTTGTTCTCA 59.173 36.000 19.73 8.05 30.23 3.27
931 950 7.491682 ACTTGTTCTCAGTAATGCAAATTTGT 58.508 30.769 19.03 2.68 0.00 2.83
962 981 3.320610 TCCTGATTGGTTTTGGGTGAA 57.679 42.857 0.00 0.00 37.07 3.18
979 998 3.565516 GTGAAATTTTCCCGAGCTTCAC 58.434 45.455 6.68 0.00 36.84 3.18
994 1013 2.950309 GCTTCACTCTTGGATGCATCAT 59.050 45.455 27.25 3.29 35.98 2.45
995 1014 3.380637 GCTTCACTCTTGGATGCATCATT 59.619 43.478 27.25 0.00 35.98 2.57
1035 1054 5.616270 TCATTACCAGCAAGTCTACAACAA 58.384 37.500 0.00 0.00 0.00 2.83
1046 1065 5.931441 AGTCTACAACAAATGTCAGCTTC 57.069 39.130 0.00 0.00 42.70 3.86
1050 1069 1.879380 CAACAAATGTCAGCTTCCCGA 59.121 47.619 0.00 0.00 0.00 5.14
1092 1116 0.601558 TCACAGGTCTAGTTCCACGC 59.398 55.000 8.81 0.00 0.00 5.34
1104 1131 3.870274 AGTTCCACGCCTTCCTATAAAC 58.130 45.455 0.00 0.00 0.00 2.01
1163 1190 1.684983 GCCATTGCCACATGAGCTAAT 59.315 47.619 0.00 2.59 0.00 1.73
1183 1210 2.743928 CTCCACGGCTTGAGGTGC 60.744 66.667 0.00 0.00 32.85 5.01
1186 1213 2.031012 CACGGCTTGAGGTGCTGA 59.969 61.111 1.34 0.00 39.85 4.26
1276 1303 4.201822 GCTTGGACCTATCACGAAACAATC 60.202 45.833 0.00 0.00 0.00 2.67
1305 1332 4.501071 GAGATGTTTTGCAATGCTGGAAT 58.499 39.130 6.82 0.00 32.35 3.01
1307 1334 2.768698 TGTTTTGCAATGCTGGAATGG 58.231 42.857 6.82 0.00 32.35 3.16
1308 1335 2.104451 TGTTTTGCAATGCTGGAATGGT 59.896 40.909 6.82 0.00 32.35 3.55
1309 1336 2.738314 GTTTTGCAATGCTGGAATGGTC 59.262 45.455 6.82 0.00 32.35 4.02
1335 1362 4.389374 ACAACAATACTTCAGTGTCCAGG 58.611 43.478 0.00 0.00 33.44 4.45
1373 1400 8.585471 AATCAATTTGGTTCTGTCATGTCTAT 57.415 30.769 0.00 0.00 0.00 1.98
1379 1406 7.482169 TTGGTTCTGTCATGTCTATTCTAGT 57.518 36.000 0.00 0.00 0.00 2.57
1396 1423 7.934855 ATTCTAGTCTTGAGCAACAATGATT 57.065 32.000 0.00 0.00 37.88 2.57
1401 1428 5.084722 GTCTTGAGCAACAATGATTTCTCG 58.915 41.667 0.00 0.00 37.88 4.04
1499 1526 0.400213 TTGCCAGAGTGGTTACCAGG 59.600 55.000 3.45 3.37 40.46 4.45
1508 1535 3.571590 AGTGGTTACCAGGAAAAATGCA 58.428 40.909 3.45 0.00 32.34 3.96
1547 1574 8.634335 TTGAGGTTGAGATCAAATATGTTCAA 57.366 30.769 0.00 0.00 37.63 2.69
1567 1594 4.141181 TCAATGGCCATATTCCTAGCAACT 60.141 41.667 21.15 0.00 0.00 3.16
1579 1606 4.725490 TCCTAGCAACTTTACTTGCCTTT 58.275 39.130 0.32 0.00 46.63 3.11
1589 1616 6.438763 ACTTTACTTGCCTTTCAAATCTTCG 58.561 36.000 0.00 0.00 33.65 3.79
1600 1627 6.806739 CCTTTCAAATCTTCGTTATTTGGACC 59.193 38.462 14.98 0.00 42.17 4.46
1624 1652 6.098409 CCTAGCCCGTAACAATATATCAGGAT 59.902 42.308 0.00 0.00 0.00 3.24
1663 1691 8.242053 CACTATCAAACTTGAAAGCAATGAGAT 58.758 33.333 0.00 0.00 41.13 2.75
1667 1695 4.606457 ACTTGAAAGCAATGAGATACGC 57.394 40.909 0.00 0.00 32.68 4.42
1669 1697 4.637534 ACTTGAAAGCAATGAGATACGCAT 59.362 37.500 0.00 0.00 32.68 4.73
1672 1700 4.271776 TGAAAGCAATGAGATACGCATCTG 59.728 41.667 1.98 0.00 41.78 2.90
1680 1708 7.482474 CAATGAGATACGCATCTGATAGAGAT 58.518 38.462 1.98 0.00 41.78 2.75
1681 1709 7.643569 ATGAGATACGCATCTGATAGAGATT 57.356 36.000 1.98 0.00 41.78 2.40
1716 1762 8.587952 ACTATGTTTTTAATGGTGCTTTTGAC 57.412 30.769 0.00 0.00 0.00 3.18
1737 1783 1.672881 GACAGCATGCCAGTAATCACC 59.327 52.381 15.66 0.00 42.53 4.02
1857 1903 3.434309 ACATTTGCTGATTGGGCTTACT 58.566 40.909 0.00 0.00 0.00 2.24
1861 1907 5.429681 TTTGCTGATTGGGCTTACTAGTA 57.570 39.130 0.00 0.00 0.00 1.82
1867 1913 5.925509 TGATTGGGCTTACTAGTATGAACC 58.074 41.667 17.58 16.99 0.00 3.62
1885 1931 5.674525 TGAACCTATCAAGTAATCAGCTGG 58.325 41.667 15.13 0.00 34.30 4.85
1900 1946 1.937546 GCTGGTCGGCAAAATCCCAG 61.938 60.000 0.00 0.00 44.43 4.45
1945 1991 0.472161 GGAGTCCCTGGACCTATCCC 60.472 65.000 12.66 3.67 45.59 3.85
1960 2006 4.258543 CCTATCCCGCAACAAGTTTTCTA 58.741 43.478 0.00 0.00 0.00 2.10
2064 2110 1.741770 CGGGCCACAGCTACAAGTC 60.742 63.158 4.39 0.00 39.73 3.01
2100 2146 1.414919 GGTATCTACATCGGCAACCCA 59.585 52.381 0.00 0.00 0.00 4.51
2122 2168 1.964933 GTCTATGTGGCTACCCTCTCC 59.035 57.143 0.00 0.00 0.00 3.71
2146 2192 4.322349 CCAAGAGCTGTTCTGCTAGTACTT 60.322 45.833 0.00 1.99 44.17 2.24
2148 2194 4.082845 AGAGCTGTTCTGCTAGTACTTCA 58.917 43.478 0.00 0.00 44.17 3.02
2149 2195 4.524714 AGAGCTGTTCTGCTAGTACTTCAA 59.475 41.667 0.00 0.00 44.17 2.69
2235 2282 0.539986 TAGGATTTGTGGTCGGCCTC 59.460 55.000 7.97 3.76 35.27 4.70
2305 2352 7.939782 TGCTTACTTTCAGATCATTGACAAAA 58.060 30.769 0.00 0.00 0.00 2.44
2364 2411 2.356535 GGCTCACCTGATGAAGAACCAT 60.357 50.000 0.00 0.00 36.69 3.55
2582 2724 5.579047 TGTATGGGTTGAATCAAGTGGAAT 58.421 37.500 0.00 0.00 0.00 3.01
2588 2730 6.953520 TGGGTTGAATCAAGTGGAATTATTCT 59.046 34.615 4.87 0.00 0.00 2.40
2590 2732 8.406297 GGGTTGAATCAAGTGGAATTATTCTAC 58.594 37.037 12.58 12.58 40.98 2.59
2624 2766 5.133221 AGACATCCTGTTTTGTAAACAGCT 58.867 37.500 21.14 12.53 44.62 4.24
2633 2775 7.750903 CCTGTTTTGTAAACAGCTTATTCTAGC 59.249 37.037 21.14 0.00 44.62 3.42
2637 2779 6.294361 TGTAAACAGCTTATTCTAGCCAGA 57.706 37.500 0.00 0.00 42.20 3.86
2638 2780 6.106673 TGTAAACAGCTTATTCTAGCCAGAC 58.893 40.000 0.00 0.00 42.20 3.51
2639 2781 3.828875 ACAGCTTATTCTAGCCAGACC 57.171 47.619 0.00 0.00 42.20 3.85
2640 2782 3.107601 ACAGCTTATTCTAGCCAGACCA 58.892 45.455 0.00 0.00 42.20 4.02
2645 2787 4.944317 GCTTATTCTAGCCAGACCAAAAGT 59.056 41.667 0.00 0.00 35.06 2.66
2651 2793 0.389025 GCCAGACCAAAAGTTGTGGG 59.611 55.000 16.74 1.74 40.75 4.61
2657 2799 0.758123 CCAAAAGTTGTGGGCATGGT 59.242 50.000 3.86 0.00 32.03 3.55
2659 2801 2.421248 CCAAAAGTTGTGGGCATGGTTT 60.421 45.455 3.86 0.00 32.03 3.27
2661 2803 1.047801 AAGTTGTGGGCATGGTTTCC 58.952 50.000 0.00 0.00 0.00 3.13
2664 2806 0.187117 TTGTGGGCATGGTTTCCTGA 59.813 50.000 0.00 0.00 0.00 3.86
2665 2807 0.251297 TGTGGGCATGGTTTCCTGAG 60.251 55.000 0.00 0.00 0.00 3.35
2666 2808 0.251341 GTGGGCATGGTTTCCTGAGT 60.251 55.000 0.00 0.00 0.00 3.41
2669 2829 1.620822 GGCATGGTTTCCTGAGTTGT 58.379 50.000 0.00 0.00 0.00 3.32
2676 2836 1.404035 GTTTCCTGAGTTGTTTGCGGT 59.596 47.619 0.00 0.00 0.00 5.68
2685 2845 2.812011 AGTTGTTTGCGGTCTATGTTCC 59.188 45.455 0.00 0.00 0.00 3.62
2692 2852 1.676014 GCGGTCTATGTTCCTGCTTGT 60.676 52.381 0.00 0.00 0.00 3.16
2698 2858 1.531423 ATGTTCCTGCTTGTGCTCAG 58.469 50.000 0.00 0.00 40.48 3.35
2707 2867 1.065564 GCTTGTGCTCAGGAAGGAGAT 60.066 52.381 1.62 0.00 37.05 2.75
2712 2872 3.137533 GTGCTCAGGAAGGAGATAATGC 58.862 50.000 0.00 0.00 37.05 3.56
2715 2875 3.401182 CTCAGGAAGGAGATAATGCTGC 58.599 50.000 0.00 0.00 37.05 5.25
2728 2888 2.894763 ATGCTGCTTTTGTTTCTGCA 57.105 40.000 0.00 0.00 38.63 4.41
2748 2908 4.953579 TGCAGGGCTGTATGATATATCGTA 59.046 41.667 10.11 10.11 0.00 3.43
2754 2914 6.096423 GGGCTGTATGATATATCGTAGTTCCA 59.904 42.308 13.85 8.33 0.00 3.53
2759 2919 5.547181 TGATATATCGTAGTTCCAGCGAG 57.453 43.478 8.19 0.00 38.06 5.03
2760 2920 2.708386 ATATCGTAGTTCCAGCGAGC 57.292 50.000 0.00 0.00 38.06 5.03
2762 2922 1.374343 ATCGTAGTTCCAGCGAGCGA 61.374 55.000 0.00 0.00 38.06 4.93
2763 2923 1.154093 CGTAGTTCCAGCGAGCGAA 60.154 57.895 0.00 0.00 0.00 4.70
2764 2924 1.403972 CGTAGTTCCAGCGAGCGAAC 61.404 60.000 7.46 7.46 38.93 3.95
2766 2926 0.109272 TAGTTCCAGCGAGCGAACTG 60.109 55.000 20.67 4.67 46.26 3.16
2767 2927 2.738521 TTCCAGCGAGCGAACTGC 60.739 61.111 0.00 0.00 46.98 4.40
2776 2936 3.946907 GCGAACTGCGTACCTGTT 58.053 55.556 6.40 6.40 43.41 3.16
2777 2937 2.231820 GCGAACTGCGTACCTGTTT 58.768 52.632 7.62 0.00 43.41 2.83
2778 2938 0.584876 GCGAACTGCGTACCTGTTTT 59.415 50.000 7.62 0.00 43.41 2.43
2801 2961 7.663043 TTTTTACCTTGGTTCAGTATTTGGT 57.337 32.000 0.00 0.00 0.00 3.67
2802 2962 6.887626 TTTACCTTGGTTCAGTATTTGGTC 57.112 37.500 0.00 0.00 0.00 4.02
2803 2963 4.724279 ACCTTGGTTCAGTATTTGGTCT 57.276 40.909 0.00 0.00 0.00 3.85
2805 2965 3.758554 CCTTGGTTCAGTATTTGGTCTGG 59.241 47.826 0.00 0.00 33.13 3.86
2806 2966 4.506625 CCTTGGTTCAGTATTTGGTCTGGA 60.507 45.833 0.00 0.00 33.13 3.86
2807 2967 4.715534 TGGTTCAGTATTTGGTCTGGAA 57.284 40.909 0.00 0.00 33.13 3.53
2809 2969 6.381498 TGGTTCAGTATTTGGTCTGGAATA 57.619 37.500 0.00 0.00 33.13 1.75
2810 2970 6.177610 TGGTTCAGTATTTGGTCTGGAATAC 58.822 40.000 0.00 0.00 38.44 1.89
2811 2971 6.012858 TGGTTCAGTATTTGGTCTGGAATACT 60.013 38.462 3.59 3.59 45.27 2.12
2812 2972 7.181305 TGGTTCAGTATTTGGTCTGGAATACTA 59.819 37.037 8.05 0.00 43.56 1.82
2821 3103 6.037786 TGGTCTGGAATACTACAGTTCAAG 57.962 41.667 0.00 0.00 36.17 3.02
2836 3118 5.582665 ACAGTTCAAGTCTTGAGTCTGAAAC 59.417 40.000 32.59 21.14 41.47 2.78
2854 3136 7.114529 GTCTGAAACTCTGAATTTGAAGCAATG 59.885 37.037 0.00 0.00 0.00 2.82
2865 3147 8.751242 TGAATTTGAAGCAATGATAATGAAGGA 58.249 29.630 0.00 0.00 0.00 3.36
2866 3148 8.937634 AATTTGAAGCAATGATAATGAAGGAC 57.062 30.769 0.00 0.00 0.00 3.85
2891 3173 1.731700 CGCCTGGCCTGATTGATTG 59.268 57.895 14.12 0.00 0.00 2.67
2892 3174 1.440476 GCCTGGCCTGATTGATTGC 59.560 57.895 11.88 0.00 0.00 3.56
2895 3177 1.683938 CCTGGCCTGATTGATTGCTCA 60.684 52.381 11.88 0.00 0.00 4.26
2901 3183 1.404391 CTGATTGATTGCTCACCTGGC 59.596 52.381 0.00 0.00 0.00 4.85
2902 3184 1.272037 TGATTGATTGCTCACCTGGCA 60.272 47.619 0.00 0.00 37.97 4.92
2917 3199 0.895100 TGGCAAAGCAGGTAGGCAAG 60.895 55.000 0.00 0.00 35.83 4.01
2942 3224 4.118410 GGACACTGACTGATGCTAGAATG 58.882 47.826 0.00 0.00 0.00 2.67
2949 3232 7.118825 CACTGACTGATGCTAGAATGAAAAAGA 59.881 37.037 0.00 0.00 0.00 2.52
2956 3239 9.414295 TGATGCTAGAATGAAAAAGAATTTGTG 57.586 29.630 0.00 0.00 39.02 3.33
2999 3284 3.686726 GGTCCTCTACTTTGATGTTGCTG 59.313 47.826 0.00 0.00 0.00 4.41
3002 3287 6.109359 GTCCTCTACTTTGATGTTGCTGTAT 58.891 40.000 0.00 0.00 0.00 2.29
3003 3288 6.036517 GTCCTCTACTTTGATGTTGCTGTATG 59.963 42.308 0.00 0.00 0.00 2.39
3020 3305 5.303259 TGTATGGCAATTAGTATCCAGCA 57.697 39.130 0.00 0.00 31.36 4.41
3106 3392 5.716703 TCACACATATGACTTCTCTTGGAGA 59.283 40.000 10.38 0.00 36.86 3.71
3107 3393 6.211384 TCACACATATGACTTCTCTTGGAGAA 59.789 38.462 10.38 9.24 45.01 2.87
3108 3394 7.046652 CACACATATGACTTCTCTTGGAGAAT 58.953 38.462 10.38 2.38 45.84 2.40
3109 3395 8.200120 CACACATATGACTTCTCTTGGAGAATA 58.800 37.037 10.38 1.80 45.84 1.75
3110 3396 8.420222 ACACATATGACTTCTCTTGGAGAATAG 58.580 37.037 10.38 3.28 45.84 1.73
3111 3397 7.871973 CACATATGACTTCTCTTGGAGAATAGG 59.128 40.741 10.38 5.10 45.84 2.57
3112 3398 7.786943 ACATATGACTTCTCTTGGAGAATAGGA 59.213 37.037 10.38 0.00 45.84 2.94
3113 3399 5.923733 TGACTTCTCTTGGAGAATAGGAC 57.076 43.478 9.92 1.98 45.84 3.85
3114 3400 4.712337 TGACTTCTCTTGGAGAATAGGACC 59.288 45.833 9.92 0.00 45.84 4.46
3115 3401 4.689062 ACTTCTCTTGGAGAATAGGACCA 58.311 43.478 9.92 0.00 45.84 4.02
3116 3402 4.468153 ACTTCTCTTGGAGAATAGGACCAC 59.532 45.833 9.92 0.00 45.84 4.16
3117 3403 4.061131 TCTCTTGGAGAATAGGACCACA 57.939 45.455 0.00 0.00 35.59 4.17
3118 3404 4.026744 TCTCTTGGAGAATAGGACCACAG 58.973 47.826 0.00 0.00 35.59 3.66
3119 3405 4.026744 CTCTTGGAGAATAGGACCACAGA 58.973 47.826 0.00 0.00 33.20 3.41
3120 3406 4.624913 TCTTGGAGAATAGGACCACAGAT 58.375 43.478 0.00 0.00 33.20 2.90
3121 3407 4.406972 TCTTGGAGAATAGGACCACAGATG 59.593 45.833 0.00 0.00 33.20 2.90
3134 3420 2.684881 CCACAGATGGTGCAATACTTCC 59.315 50.000 0.00 0.00 46.50 3.46
3135 3421 3.346315 CACAGATGGTGCAATACTTCCA 58.654 45.455 0.00 0.00 41.36 3.53
3136 3422 3.376234 CACAGATGGTGCAATACTTCCAG 59.624 47.826 0.00 0.00 41.36 3.86
3137 3423 3.009473 ACAGATGGTGCAATACTTCCAGT 59.991 43.478 0.00 0.00 33.33 4.00
3138 3424 4.225042 ACAGATGGTGCAATACTTCCAGTA 59.775 41.667 0.00 0.00 34.82 2.74
3139 3425 5.104360 ACAGATGGTGCAATACTTCCAGTAT 60.104 40.000 0.00 0.00 42.86 2.12
3140 3426 6.099701 ACAGATGGTGCAATACTTCCAGTATA 59.900 38.462 0.00 0.00 40.32 1.47
3141 3427 6.648310 CAGATGGTGCAATACTTCCAGTATAG 59.352 42.308 0.00 0.00 40.32 1.31
3142 3428 6.554982 AGATGGTGCAATACTTCCAGTATAGA 59.445 38.462 0.00 0.00 40.32 1.98
3143 3429 6.747414 TGGTGCAATACTTCCAGTATAGAT 57.253 37.500 0.00 0.00 40.32 1.98
3144 3430 6.759272 TGGTGCAATACTTCCAGTATAGATC 58.241 40.000 0.00 0.00 40.32 2.75
3145 3431 6.326323 TGGTGCAATACTTCCAGTATAGATCA 59.674 38.462 0.00 0.00 40.32 2.92
3146 3432 6.870965 GGTGCAATACTTCCAGTATAGATCAG 59.129 42.308 0.00 0.00 40.32 2.90
3147 3433 7.255977 GGTGCAATACTTCCAGTATAGATCAGA 60.256 40.741 0.00 0.00 40.32 3.27
3148 3434 8.144478 GTGCAATACTTCCAGTATAGATCAGAA 58.856 37.037 0.00 0.00 40.32 3.02
3149 3435 8.874156 TGCAATACTTCCAGTATAGATCAGAAT 58.126 33.333 0.00 0.00 40.32 2.40
3150 3436 9.717942 GCAATACTTCCAGTATAGATCAGAATT 57.282 33.333 0.00 0.00 40.32 2.17
3158 3444 9.201989 TCCAGTATAGATCAGAATTGTAAGTGT 57.798 33.333 0.00 0.00 0.00 3.55
3159 3445 9.823647 CCAGTATAGATCAGAATTGTAAGTGTT 57.176 33.333 0.00 0.00 0.00 3.32
3165 3451 8.779354 AGATCAGAATTGTAAGTGTTAGGTTC 57.221 34.615 0.00 0.00 0.00 3.62
3166 3452 8.598041 AGATCAGAATTGTAAGTGTTAGGTTCT 58.402 33.333 0.00 0.00 0.00 3.01
3167 3453 7.962964 TCAGAATTGTAAGTGTTAGGTTCTG 57.037 36.000 0.00 0.00 41.43 3.02
3168 3454 7.506114 TCAGAATTGTAAGTGTTAGGTTCTGT 58.494 34.615 10.44 0.00 41.07 3.41
3169 3455 8.644216 TCAGAATTGTAAGTGTTAGGTTCTGTA 58.356 33.333 10.44 0.00 41.07 2.74
3170 3456 9.268268 CAGAATTGTAAGTGTTAGGTTCTGTAA 57.732 33.333 0.00 0.00 37.56 2.41
3175 3461 8.827177 TGTAAGTGTTAGGTTCTGTAATTCTG 57.173 34.615 0.00 0.00 0.00 3.02
3176 3462 8.644216 TGTAAGTGTTAGGTTCTGTAATTCTGA 58.356 33.333 0.00 0.00 0.00 3.27
3177 3463 9.485206 GTAAGTGTTAGGTTCTGTAATTCTGAA 57.515 33.333 0.00 0.00 0.00 3.02
3178 3464 8.974060 AAGTGTTAGGTTCTGTAATTCTGAAA 57.026 30.769 0.00 0.00 36.16 2.69
3179 3465 9.574516 AAGTGTTAGGTTCTGTAATTCTGAAAT 57.425 29.630 0.00 0.00 36.16 2.17
3180 3466 9.220767 AGTGTTAGGTTCTGTAATTCTGAAATC 57.779 33.333 0.00 0.00 36.16 2.17
3181 3467 9.220767 GTGTTAGGTTCTGTAATTCTGAAATCT 57.779 33.333 0.00 0.00 36.16 2.40
3182 3468 9.219603 TGTTAGGTTCTGTAATTCTGAAATCTG 57.780 33.333 0.00 0.00 36.16 2.90
3183 3469 9.436957 GTTAGGTTCTGTAATTCTGAAATCTGA 57.563 33.333 0.00 0.00 36.16 3.27
3186 3472 9.171877 AGGTTCTGTAATTCTGAAATCTGAATC 57.828 33.333 13.67 4.86 41.58 2.52
3187 3473 8.950210 GGTTCTGTAATTCTGAAATCTGAATCA 58.050 33.333 13.67 9.00 41.58 2.57
3191 3477 9.270576 CTGTAATTCTGAAATCTGAATCAAACG 57.729 33.333 13.67 7.59 41.58 3.60
3192 3478 7.750458 TGTAATTCTGAAATCTGAATCAAACGC 59.250 33.333 13.67 4.79 41.58 4.84
3193 3479 5.687770 TTCTGAAATCTGAATCAAACGCA 57.312 34.783 0.00 0.00 0.00 5.24
3194 3480 5.687770 TCTGAAATCTGAATCAAACGCAA 57.312 34.783 0.00 0.00 0.00 4.85
3195 3481 6.805271 ATTCTGAAATCTGAATCAAACGCAAG 59.195 34.615 9.05 0.00 39.34 4.01
3196 3482 4.229096 TGAAATCTGAATCAAACGCAAGC 58.771 39.130 0.00 0.00 45.62 4.01
3197 3483 4.022935 TGAAATCTGAATCAAACGCAAGCT 60.023 37.500 0.00 0.00 45.62 3.74
3198 3484 2.975410 TCTGAATCAAACGCAAGCTG 57.025 45.000 0.00 0.00 45.62 4.24
3199 3485 1.069022 TCTGAATCAAACGCAAGCTGC 60.069 47.619 0.00 0.00 45.62 5.25
3200 3486 0.667453 TGAATCAAACGCAAGCTGCA 59.333 45.000 1.02 0.00 45.36 4.41
3201 3487 1.066757 TGAATCAAACGCAAGCTGCAA 59.933 42.857 1.02 0.00 45.36 4.08
3202 3488 2.126467 GAATCAAACGCAAGCTGCAAA 58.874 42.857 1.02 0.00 45.36 3.68
3203 3489 1.490621 ATCAAACGCAAGCTGCAAAC 58.509 45.000 1.02 0.00 45.36 2.93
3204 3490 0.455410 TCAAACGCAAGCTGCAAACT 59.545 45.000 1.02 0.00 45.36 2.66
3205 3491 0.573521 CAAACGCAAGCTGCAAACTG 59.426 50.000 1.02 0.00 45.36 3.16
3206 3492 0.173255 AAACGCAAGCTGCAAACTGT 59.827 45.000 1.02 0.00 45.36 3.55
3207 3493 0.248621 AACGCAAGCTGCAAACTGTC 60.249 50.000 1.02 0.00 45.36 3.51
3208 3494 1.723542 CGCAAGCTGCAAACTGTCG 60.724 57.895 1.02 0.00 45.36 4.35
3209 3495 1.370900 GCAAGCTGCAAACTGTCGG 60.371 57.895 1.02 0.00 44.26 4.79
3210 3496 1.283793 CAAGCTGCAAACTGTCGGG 59.716 57.895 1.02 0.00 0.00 5.14
3211 3497 1.148273 AAGCTGCAAACTGTCGGGA 59.852 52.632 1.02 0.00 0.00 5.14
3212 3498 1.166531 AAGCTGCAAACTGTCGGGAC 61.167 55.000 1.02 0.00 0.00 4.46
3213 3499 1.598130 GCTGCAAACTGTCGGGACT 60.598 57.895 0.00 0.00 0.00 3.85
3214 3500 1.845809 GCTGCAAACTGTCGGGACTG 61.846 60.000 0.00 4.42 36.50 3.51
3215 3501 0.249868 CTGCAAACTGTCGGGACTGA 60.250 55.000 11.91 0.00 34.80 3.41
3216 3502 0.179234 TGCAAACTGTCGGGACTGAA 59.821 50.000 11.91 0.00 34.80 3.02
3217 3503 1.202758 TGCAAACTGTCGGGACTGAAT 60.203 47.619 11.91 0.00 34.80 2.57
3218 3504 1.880027 GCAAACTGTCGGGACTGAATT 59.120 47.619 11.91 4.76 34.80 2.17
3219 3505 2.293399 GCAAACTGTCGGGACTGAATTT 59.707 45.455 11.91 1.75 34.80 1.82
3220 3506 3.243401 GCAAACTGTCGGGACTGAATTTT 60.243 43.478 11.91 1.15 34.80 1.82
3221 3507 4.290155 CAAACTGTCGGGACTGAATTTTG 58.710 43.478 11.91 8.57 34.80 2.44
3222 3508 2.504367 ACTGTCGGGACTGAATTTTGG 58.496 47.619 11.91 0.00 34.80 3.28
3223 3509 2.158667 ACTGTCGGGACTGAATTTTGGT 60.159 45.455 11.91 0.00 34.80 3.67
3224 3510 2.226330 TGTCGGGACTGAATTTTGGTG 58.774 47.619 0.00 0.00 0.00 4.17
3225 3511 2.158740 TGTCGGGACTGAATTTTGGTGA 60.159 45.455 0.00 0.00 0.00 4.02
3226 3512 3.081804 GTCGGGACTGAATTTTGGTGAT 58.918 45.455 0.00 0.00 0.00 3.06
3227 3513 4.258543 GTCGGGACTGAATTTTGGTGATA 58.741 43.478 0.00 0.00 0.00 2.15
3228 3514 4.094442 GTCGGGACTGAATTTTGGTGATAC 59.906 45.833 0.00 0.00 0.00 2.24
3229 3515 4.006989 CGGGACTGAATTTTGGTGATACA 58.993 43.478 0.00 0.00 0.00 2.29
3230 3516 4.094887 CGGGACTGAATTTTGGTGATACAG 59.905 45.833 0.00 0.00 0.00 2.74
3231 3517 5.253330 GGGACTGAATTTTGGTGATACAGA 58.747 41.667 0.00 0.00 0.00 3.41
3232 3518 5.710099 GGGACTGAATTTTGGTGATACAGAA 59.290 40.000 0.00 0.00 0.00 3.02
3233 3519 6.349363 GGGACTGAATTTTGGTGATACAGAAC 60.349 42.308 0.00 0.00 0.00 3.01
3234 3520 6.431234 GGACTGAATTTTGGTGATACAGAACT 59.569 38.462 0.00 0.00 0.00 3.01
3235 3521 7.040409 GGACTGAATTTTGGTGATACAGAACTT 60.040 37.037 0.00 0.00 0.00 2.66
3236 3522 7.651808 ACTGAATTTTGGTGATACAGAACTTG 58.348 34.615 0.00 0.00 0.00 3.16
3237 3523 6.980593 TGAATTTTGGTGATACAGAACTTGG 58.019 36.000 0.00 0.00 0.00 3.61
3238 3524 6.549364 TGAATTTTGGTGATACAGAACTTGGT 59.451 34.615 0.00 0.00 0.00 3.67
3239 3525 5.766150 TTTTGGTGATACAGAACTTGGTG 57.234 39.130 0.00 0.00 0.00 4.17
3240 3526 2.778299 TGGTGATACAGAACTTGGTGC 58.222 47.619 0.00 0.00 0.00 5.01
3241 3527 2.105649 TGGTGATACAGAACTTGGTGCA 59.894 45.455 0.00 0.00 0.00 4.57
3242 3528 3.244875 TGGTGATACAGAACTTGGTGCAT 60.245 43.478 0.00 0.00 0.00 3.96
3243 3529 3.127548 GGTGATACAGAACTTGGTGCATG 59.872 47.826 0.00 0.00 0.00 4.06
3244 3530 3.753272 GTGATACAGAACTTGGTGCATGT 59.247 43.478 0.00 0.00 0.00 3.21
3245 3531 4.935205 GTGATACAGAACTTGGTGCATGTA 59.065 41.667 0.00 0.00 0.00 2.29
3246 3532 5.063944 GTGATACAGAACTTGGTGCATGTAG 59.936 44.000 0.00 0.00 0.00 2.74
3247 3533 3.769739 ACAGAACTTGGTGCATGTAGA 57.230 42.857 0.00 0.00 0.00 2.59
3248 3534 4.085357 ACAGAACTTGGTGCATGTAGAA 57.915 40.909 0.00 0.00 0.00 2.10
3249 3535 4.655963 ACAGAACTTGGTGCATGTAGAAT 58.344 39.130 0.00 0.00 0.00 2.40
3250 3536 5.072741 ACAGAACTTGGTGCATGTAGAATT 58.927 37.500 0.00 0.00 0.00 2.17
3251 3537 5.536161 ACAGAACTTGGTGCATGTAGAATTT 59.464 36.000 0.00 0.00 0.00 1.82
3252 3538 6.714810 ACAGAACTTGGTGCATGTAGAATTTA 59.285 34.615 0.00 0.00 0.00 1.40
3253 3539 7.094634 ACAGAACTTGGTGCATGTAGAATTTAG 60.095 37.037 0.00 0.00 0.00 1.85
3254 3540 6.942576 AGAACTTGGTGCATGTAGAATTTAGT 59.057 34.615 0.00 0.00 0.00 2.24
3255 3541 8.100791 AGAACTTGGTGCATGTAGAATTTAGTA 58.899 33.333 0.00 0.00 0.00 1.82
3256 3542 7.849804 ACTTGGTGCATGTAGAATTTAGTAG 57.150 36.000 0.00 0.00 0.00 2.57
3257 3543 7.394816 ACTTGGTGCATGTAGAATTTAGTAGT 58.605 34.615 0.00 0.00 0.00 2.73
3258 3544 8.537016 ACTTGGTGCATGTAGAATTTAGTAGTA 58.463 33.333 0.00 0.00 0.00 1.82
3259 3545 9.378551 CTTGGTGCATGTAGAATTTAGTAGTAA 57.621 33.333 0.00 0.00 0.00 2.24
3260 3546 9.899661 TTGGTGCATGTAGAATTTAGTAGTAAT 57.100 29.630 0.00 0.00 0.00 1.89
3261 3547 9.542462 TGGTGCATGTAGAATTTAGTAGTAATC 57.458 33.333 0.00 0.00 0.00 1.75
3262 3548 9.765795 GGTGCATGTAGAATTTAGTAGTAATCT 57.234 33.333 0.00 0.00 0.00 2.40
3281 3567 9.461312 AGTAATCTATATTTGTCTTTGCCAACA 57.539 29.630 0.00 0.00 0.00 3.33
3284 3570 7.936496 TCTATATTTGTCTTTGCCAACATGA 57.064 32.000 0.00 0.00 0.00 3.07
3285 3571 8.523915 TCTATATTTGTCTTTGCCAACATGAT 57.476 30.769 0.00 0.00 0.00 2.45
3286 3572 8.407832 TCTATATTTGTCTTTGCCAACATGATG 58.592 33.333 0.00 0.00 0.00 3.07
3287 3573 4.933505 TTTGTCTTTGCCAACATGATGA 57.066 36.364 4.25 0.00 0.00 2.92
3288 3574 5.471556 TTTGTCTTTGCCAACATGATGAT 57.528 34.783 4.25 0.00 0.00 2.45
3289 3575 5.471556 TTGTCTTTGCCAACATGATGATT 57.528 34.783 4.25 0.00 0.00 2.57
3290 3576 5.063180 TGTCTTTGCCAACATGATGATTC 57.937 39.130 4.25 0.00 0.00 2.52
3291 3577 4.523558 TGTCTTTGCCAACATGATGATTCA 59.476 37.500 4.25 0.00 36.00 2.57
3292 3578 5.100259 GTCTTTGCCAACATGATGATTCAG 58.900 41.667 4.25 0.00 34.73 3.02
3293 3579 4.158949 TCTTTGCCAACATGATGATTCAGG 59.841 41.667 4.25 0.00 39.53 3.86
3294 3580 1.752498 TGCCAACATGATGATTCAGGC 59.248 47.619 4.25 5.52 39.02 4.85
3295 3581 1.752498 GCCAACATGATGATTCAGGCA 59.248 47.619 4.25 1.17 38.63 4.75
3296 3582 2.364324 GCCAACATGATGATTCAGGCAT 59.636 45.455 4.25 3.25 38.63 4.40
3297 3583 3.798889 GCCAACATGATGATTCAGGCATG 60.799 47.826 21.43 21.43 38.63 4.06
3301 3587 5.300411 ACATGATGATTCAGGCATGTAGA 57.700 39.130 24.77 0.00 46.65 2.59
3302 3588 5.687780 ACATGATGATTCAGGCATGTAGAA 58.312 37.500 24.77 0.00 46.65 2.10
3303 3589 6.304624 ACATGATGATTCAGGCATGTAGAAT 58.695 36.000 24.77 8.49 46.65 2.40
3304 3590 6.206829 ACATGATGATTCAGGCATGTAGAATG 59.793 38.462 24.77 9.28 46.65 2.67
3305 3591 5.687780 TGATGATTCAGGCATGTAGAATGT 58.312 37.500 12.12 3.86 32.51 2.71
3306 3592 6.829849 TGATGATTCAGGCATGTAGAATGTA 58.170 36.000 12.12 4.53 32.51 2.29
3307 3593 7.455891 TGATGATTCAGGCATGTAGAATGTAT 58.544 34.615 12.12 7.86 32.51 2.29
3308 3594 7.389607 TGATGATTCAGGCATGTAGAATGTATG 59.610 37.037 12.12 0.00 32.51 2.39
3309 3595 5.471116 TGATTCAGGCATGTAGAATGTATGC 59.529 40.000 12.12 0.00 44.81 3.14
3310 3596 4.420522 TCAGGCATGTAGAATGTATGCA 57.579 40.909 10.16 0.00 46.74 3.96
3311 3597 4.779696 TCAGGCATGTAGAATGTATGCAA 58.220 39.130 10.16 0.00 46.74 4.08
3312 3598 4.576053 TCAGGCATGTAGAATGTATGCAAC 59.424 41.667 10.16 0.00 46.74 4.17
3313 3599 4.336153 CAGGCATGTAGAATGTATGCAACA 59.664 41.667 10.16 0.00 46.74 3.33
3314 3600 4.577693 AGGCATGTAGAATGTATGCAACAG 59.422 41.667 10.16 0.00 46.74 3.16
3315 3601 4.576053 GGCATGTAGAATGTATGCAACAGA 59.424 41.667 10.16 0.00 46.74 3.41
3316 3602 5.066375 GGCATGTAGAATGTATGCAACAGAA 59.934 40.000 10.16 0.00 46.74 3.02
3317 3603 6.197276 GCATGTAGAATGTATGCAACAGAAG 58.803 40.000 0.00 0.00 44.88 2.85
3318 3604 5.801350 TGTAGAATGTATGCAACAGAAGC 57.199 39.130 0.00 0.00 42.70 3.86
3319 3605 9.479338 GCATGTAGAATGTATGCAACAGAAGCA 62.479 40.741 0.00 0.00 44.88 3.91
3320 3606 5.704978 TGTAGAATGTATGCAACAGAAGCAA 59.295 36.000 0.00 0.00 46.27 3.91
3321 3607 5.051891 AGAATGTATGCAACAGAAGCAAC 57.948 39.130 0.00 0.00 46.27 4.17
3322 3608 2.967459 TGTATGCAACAGAAGCAACG 57.033 45.000 0.00 0.00 46.27 4.10
3323 3609 1.069296 TGTATGCAACAGAAGCAACGC 60.069 47.619 0.00 0.00 46.27 4.84
3324 3610 0.521291 TATGCAACAGAAGCAACGCC 59.479 50.000 0.00 0.00 46.27 5.68
3325 3611 2.050077 GCAACAGAAGCAACGCCC 60.050 61.111 0.00 0.00 0.00 6.13
3326 3612 2.844451 GCAACAGAAGCAACGCCCA 61.844 57.895 0.00 0.00 0.00 5.36
3327 3613 1.732917 CAACAGAAGCAACGCCCAA 59.267 52.632 0.00 0.00 0.00 4.12
3328 3614 0.102120 CAACAGAAGCAACGCCCAAA 59.898 50.000 0.00 0.00 0.00 3.28
3329 3615 1.039856 AACAGAAGCAACGCCCAAAT 58.960 45.000 0.00 0.00 0.00 2.32
3330 3616 0.598065 ACAGAAGCAACGCCCAAATC 59.402 50.000 0.00 0.00 0.00 2.17
3331 3617 0.597568 CAGAAGCAACGCCCAAATCA 59.402 50.000 0.00 0.00 0.00 2.57
3332 3618 0.883833 AGAAGCAACGCCCAAATCAG 59.116 50.000 0.00 0.00 0.00 2.90
3333 3619 0.598065 GAAGCAACGCCCAAATCAGT 59.402 50.000 0.00 0.00 0.00 3.41
3334 3620 0.314935 AAGCAACGCCCAAATCAGTG 59.685 50.000 0.00 0.00 0.00 3.66
3335 3621 0.823356 AGCAACGCCCAAATCAGTGT 60.823 50.000 0.00 0.00 0.00 3.55
3336 3622 0.031994 GCAACGCCCAAATCAGTGTT 59.968 50.000 0.00 0.00 37.19 3.32
3337 3623 1.930371 GCAACGCCCAAATCAGTGTTC 60.930 52.381 0.00 0.00 34.61 3.18
3338 3624 1.336440 CAACGCCCAAATCAGTGTTCA 59.664 47.619 0.00 0.00 34.61 3.18
3339 3625 1.238439 ACGCCCAAATCAGTGTTCAG 58.762 50.000 0.00 0.00 0.00 3.02
3340 3626 1.238439 CGCCCAAATCAGTGTTCAGT 58.762 50.000 0.00 0.00 0.00 3.41
3341 3627 1.197721 CGCCCAAATCAGTGTTCAGTC 59.802 52.381 0.00 0.00 0.00 3.51
3342 3628 2.508526 GCCCAAATCAGTGTTCAGTCT 58.491 47.619 0.00 0.00 0.00 3.24
3343 3629 2.227388 GCCCAAATCAGTGTTCAGTCTG 59.773 50.000 0.00 0.00 0.00 3.51
3344 3630 2.227388 CCCAAATCAGTGTTCAGTCTGC 59.773 50.000 0.00 0.00 0.00 4.26
3345 3631 2.880268 CCAAATCAGTGTTCAGTCTGCA 59.120 45.455 0.00 0.00 0.00 4.41
3346 3632 3.304257 CCAAATCAGTGTTCAGTCTGCAC 60.304 47.826 0.00 0.00 0.00 4.57
3347 3633 2.175878 ATCAGTGTTCAGTCTGCACC 57.824 50.000 0.00 0.00 33.96 5.01
3348 3634 0.829990 TCAGTGTTCAGTCTGCACCA 59.170 50.000 0.00 0.00 33.96 4.17
3349 3635 1.417517 TCAGTGTTCAGTCTGCACCAT 59.582 47.619 0.00 0.00 33.96 3.55
3350 3636 1.802960 CAGTGTTCAGTCTGCACCATC 59.197 52.381 0.00 0.00 33.96 3.51
3351 3637 1.696336 AGTGTTCAGTCTGCACCATCT 59.304 47.619 0.00 0.00 33.96 2.90
3352 3638 1.802960 GTGTTCAGTCTGCACCATCTG 59.197 52.381 0.00 0.00 0.00 2.90
3353 3639 1.693606 TGTTCAGTCTGCACCATCTGA 59.306 47.619 0.00 0.00 35.54 3.27
3354 3640 2.104622 TGTTCAGTCTGCACCATCTGAA 59.895 45.455 11.49 11.49 42.21 3.02
3355 3641 3.141398 GTTCAGTCTGCACCATCTGAAA 58.859 45.455 15.02 3.45 44.65 2.69
3356 3642 3.708403 TCAGTCTGCACCATCTGAAAT 57.292 42.857 0.00 0.00 34.61 2.17
3357 3643 3.603532 TCAGTCTGCACCATCTGAAATC 58.396 45.455 0.00 0.00 34.61 2.17
3358 3644 3.262660 TCAGTCTGCACCATCTGAAATCT 59.737 43.478 0.00 0.00 34.61 2.40
3359 3645 3.374367 CAGTCTGCACCATCTGAAATCTG 59.626 47.826 0.00 0.00 0.00 2.90
3360 3646 2.097142 GTCTGCACCATCTGAAATCTGC 59.903 50.000 0.00 0.00 0.00 4.26
3361 3647 1.404391 CTGCACCATCTGAAATCTGCC 59.596 52.381 0.00 0.00 0.00 4.85
3362 3648 0.379669 GCACCATCTGAAATCTGCCG 59.620 55.000 0.00 0.00 0.00 5.69
3363 3649 0.379669 CACCATCTGAAATCTGCCGC 59.620 55.000 0.00 0.00 0.00 6.53
3364 3650 0.749454 ACCATCTGAAATCTGCCGCC 60.749 55.000 0.00 0.00 0.00 6.13
3365 3651 0.465097 CCATCTGAAATCTGCCGCCT 60.465 55.000 0.00 0.00 0.00 5.52
3366 3652 1.202687 CCATCTGAAATCTGCCGCCTA 60.203 52.381 0.00 0.00 0.00 3.93
3367 3653 1.869767 CATCTGAAATCTGCCGCCTAC 59.130 52.381 0.00 0.00 0.00 3.18
3368 3654 0.901827 TCTGAAATCTGCCGCCTACA 59.098 50.000 0.00 0.00 0.00 2.74
3369 3655 1.134699 TCTGAAATCTGCCGCCTACAG 60.135 52.381 0.00 0.00 36.44 2.74
3370 3656 0.107703 TGAAATCTGCCGCCTACAGG 60.108 55.000 0.00 0.00 35.78 4.00
3371 3657 0.107654 GAAATCTGCCGCCTACAGGT 60.108 55.000 0.00 0.00 35.78 4.00
3372 3658 0.328258 AAATCTGCCGCCTACAGGTT 59.672 50.000 0.00 0.00 40.17 3.50
3373 3659 0.328258 AATCTGCCGCCTACAGGTTT 59.672 50.000 0.00 0.00 34.86 3.27
3374 3660 0.392998 ATCTGCCGCCTACAGGTTTG 60.393 55.000 0.00 0.00 35.78 2.93
3375 3661 1.302511 CTGCCGCCTACAGGTTTGT 60.303 57.895 0.00 0.00 41.39 2.83
3376 3662 1.298859 CTGCCGCCTACAGGTTTGTC 61.299 60.000 0.00 0.00 38.76 3.18
3377 3663 2.038837 GCCGCCTACAGGTTTGTCC 61.039 63.158 0.00 0.00 38.76 4.02
3378 3664 1.740296 CCGCCTACAGGTTTGTCCG 60.740 63.158 0.00 0.00 41.99 4.79
3379 3665 1.740296 CGCCTACAGGTTTGTCCGG 60.740 63.158 0.00 0.00 41.99 5.14
3380 3666 2.038837 GCCTACAGGTTTGTCCGGC 61.039 63.158 0.00 5.53 42.78 6.13
3381 3667 1.376812 CCTACAGGTTTGTCCGGCC 60.377 63.158 0.00 0.00 41.99 6.13
3382 3668 1.677552 CTACAGGTTTGTCCGGCCT 59.322 57.895 0.00 0.00 41.99 5.19
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 5.922053 TGATTACCCTCATCATCACAGAAG 58.078 41.667 0.00 0.00 0.00 2.85
1 2 5.955961 TGATTACCCTCATCATCACAGAA 57.044 39.130 0.00 0.00 0.00 3.02
2 3 5.189539 TGTTGATTACCCTCATCATCACAGA 59.810 40.000 0.00 0.00 30.63 3.41
3 4 5.430886 TGTTGATTACCCTCATCATCACAG 58.569 41.667 0.00 0.00 30.63 3.66
4 5 5.434182 TGTTGATTACCCTCATCATCACA 57.566 39.130 0.00 0.00 30.63 3.58
5 6 6.057533 TCATGTTGATTACCCTCATCATCAC 58.942 40.000 0.00 0.00 34.75 3.06
6 7 6.251255 TCATGTTGATTACCCTCATCATCA 57.749 37.500 0.00 0.00 34.75 3.07
7 8 5.180868 GCTCATGTTGATTACCCTCATCATC 59.819 44.000 0.00 0.00 34.75 2.92
8 9 5.068636 GCTCATGTTGATTACCCTCATCAT 58.931 41.667 0.00 0.00 36.48 2.45
9 10 4.454678 GCTCATGTTGATTACCCTCATCA 58.545 43.478 0.00 0.00 31.39 3.07
10 11 3.817647 GGCTCATGTTGATTACCCTCATC 59.182 47.826 0.00 0.00 0.00 2.92
11 12 3.745480 CGGCTCATGTTGATTACCCTCAT 60.745 47.826 0.00 0.00 0.00 2.90
12 13 2.419990 CGGCTCATGTTGATTACCCTCA 60.420 50.000 0.00 0.00 0.00 3.86
13 14 2.213499 CGGCTCATGTTGATTACCCTC 58.787 52.381 0.00 0.00 0.00 4.30
14 15 1.559682 ACGGCTCATGTTGATTACCCT 59.440 47.619 0.00 0.00 0.00 4.34
15 16 2.038387 ACGGCTCATGTTGATTACCC 57.962 50.000 0.00 0.00 0.00 3.69
16 17 3.308866 GTGTACGGCTCATGTTGATTACC 59.691 47.826 0.00 0.00 0.00 2.85
17 18 4.181578 AGTGTACGGCTCATGTTGATTAC 58.818 43.478 0.00 0.00 0.00 1.89
18 19 4.159693 AGAGTGTACGGCTCATGTTGATTA 59.840 41.667 16.32 0.00 35.55 1.75
19 20 3.055819 AGAGTGTACGGCTCATGTTGATT 60.056 43.478 16.32 0.00 35.55 2.57
20 21 2.497675 AGAGTGTACGGCTCATGTTGAT 59.502 45.455 16.32 0.00 35.55 2.57
21 22 1.893137 AGAGTGTACGGCTCATGTTGA 59.107 47.619 16.32 0.00 35.55 3.18
22 23 1.995484 CAGAGTGTACGGCTCATGTTG 59.005 52.381 16.32 5.40 35.55 3.33
23 24 1.066858 CCAGAGTGTACGGCTCATGTT 60.067 52.381 16.32 0.00 35.55 2.71
24 25 0.532573 CCAGAGTGTACGGCTCATGT 59.467 55.000 16.32 0.00 35.55 3.21
25 26 0.817654 TCCAGAGTGTACGGCTCATG 59.182 55.000 16.32 11.89 35.55 3.07
26 27 1.781786 ATCCAGAGTGTACGGCTCAT 58.218 50.000 16.32 2.73 35.55 2.90
27 28 1.557099 AATCCAGAGTGTACGGCTCA 58.443 50.000 16.32 0.81 35.55 4.26
28 29 2.674796 AAATCCAGAGTGTACGGCTC 57.325 50.000 8.66 8.66 0.00 4.70
29 30 3.259876 TGTAAAATCCAGAGTGTACGGCT 59.740 43.478 0.00 0.00 0.00 5.52
30 31 3.592059 TGTAAAATCCAGAGTGTACGGC 58.408 45.455 0.00 0.00 0.00 5.68
31 32 4.570772 CCATGTAAAATCCAGAGTGTACGG 59.429 45.833 0.00 0.00 0.00 4.02
32 33 5.175859 ACCATGTAAAATCCAGAGTGTACG 58.824 41.667 0.00 0.00 0.00 3.67
33 34 6.128007 CCAACCATGTAAAATCCAGAGTGTAC 60.128 42.308 0.00 0.00 0.00 2.90
34 35 5.943416 CCAACCATGTAAAATCCAGAGTGTA 59.057 40.000 0.00 0.00 0.00 2.90
35 36 4.766891 CCAACCATGTAAAATCCAGAGTGT 59.233 41.667 0.00 0.00 0.00 3.55
36 37 4.380867 GCCAACCATGTAAAATCCAGAGTG 60.381 45.833 0.00 0.00 0.00 3.51
37 38 3.763897 GCCAACCATGTAAAATCCAGAGT 59.236 43.478 0.00 0.00 0.00 3.24
38 39 3.763360 TGCCAACCATGTAAAATCCAGAG 59.237 43.478 0.00 0.00 0.00 3.35
39 40 3.509575 GTGCCAACCATGTAAAATCCAGA 59.490 43.478 0.00 0.00 0.00 3.86
40 41 3.673052 CGTGCCAACCATGTAAAATCCAG 60.673 47.826 0.00 0.00 0.00 3.86
46 47 2.147958 GAGACGTGCCAACCATGTAAA 58.852 47.619 0.00 0.00 43.58 2.01
112 113 3.650942 ACCATGTGAACCTAGTCCTGAAA 59.349 43.478 0.00 0.00 0.00 2.69
114 115 2.902608 ACCATGTGAACCTAGTCCTGA 58.097 47.619 0.00 0.00 0.00 3.86
262 275 6.899393 AAACCAACTTTGCTCTAATGATGA 57.101 33.333 0.00 0.00 0.00 2.92
276 289 3.370104 TGTGACATCCCAAAACCAACTT 58.630 40.909 0.00 0.00 0.00 2.66
292 308 2.739379 GCAGCTCCTTAAGACTTGTGAC 59.261 50.000 3.36 0.00 0.00 3.67
300 316 2.700897 GGATAGGTGCAGCTCCTTAAGA 59.299 50.000 23.94 2.74 36.60 2.10
350 366 3.691609 GGATGTCATGTTTCCCAGTTCTC 59.308 47.826 0.00 0.00 0.00 2.87
383 399 9.459640 CAAGATCATTATTGCCACTAAAATCTG 57.540 33.333 0.00 0.00 0.00 2.90
397 413 7.013274 CGGTATCAAACCCACAAGATCATTATT 59.987 37.037 0.00 0.00 46.62 1.40
398 414 6.486657 CGGTATCAAACCCACAAGATCATTAT 59.513 38.462 0.00 0.00 46.62 1.28
399 415 5.820423 CGGTATCAAACCCACAAGATCATTA 59.180 40.000 0.00 0.00 46.62 1.90
424 440 5.633996 TTGCACAAATTTTCTAAGTTGCG 57.366 34.783 0.00 0.00 41.68 4.85
501 520 2.159198 GCAACTTGGCAATCGATCCATT 60.159 45.455 6.66 0.00 31.54 3.16
519 538 5.804639 ACTTGTATTGTACTCCATGAGCAA 58.195 37.500 0.00 0.00 32.04 3.91
621 640 4.261155 CCAGTTATCATGTTACCATTGGCG 60.261 45.833 1.54 0.00 0.00 5.69
697 716 5.584649 GCACACCATAGAGTTTATTGTAGCA 59.415 40.000 0.00 0.00 0.00 3.49
712 731 2.875672 GCTCCTTCACAAGCACACCATA 60.876 50.000 0.00 0.00 38.42 2.74
761 780 3.627395 AGTTGTGTGACAAGTCCAGAA 57.373 42.857 0.00 0.00 37.15 3.02
804 823 5.264395 AGTCTAAATGGAGGAACCCAATTG 58.736 41.667 0.00 0.00 40.04 2.32
831 850 6.939132 ATGCATGACTCAAGGAATAAAGAG 57.061 37.500 0.00 0.00 0.00 2.85
833 852 7.307042 CGACTATGCATGACTCAAGGAATAAAG 60.307 40.741 10.16 0.00 0.00 1.85
834 853 6.479990 CGACTATGCATGACTCAAGGAATAAA 59.520 38.462 10.16 0.00 0.00 1.40
838 857 3.430790 CCGACTATGCATGACTCAAGGAA 60.431 47.826 10.16 0.00 0.00 3.36
839 858 2.101415 CCGACTATGCATGACTCAAGGA 59.899 50.000 10.16 0.00 0.00 3.36
841 860 3.119291 GACCGACTATGCATGACTCAAG 58.881 50.000 10.16 0.00 0.00 3.02
867 886 1.667724 CGTCTAAGCCATGCTGGAAAG 59.332 52.381 6.40 1.10 40.96 2.62
875 894 0.811616 GGACTGCCGTCTAAGCCATG 60.812 60.000 8.25 0.00 40.10 3.66
876 895 1.264749 TGGACTGCCGTCTAAGCCAT 61.265 55.000 8.25 0.00 40.10 4.40
886 905 1.452110 TGATCAATGTTGGACTGCCG 58.548 50.000 0.00 0.00 36.79 5.69
892 911 5.827267 TGAGAACAAGTTGATCAATGTTGGA 59.173 36.000 24.95 10.72 36.22 3.53
895 914 6.949352 ACTGAGAACAAGTTGATCAATGTT 57.051 33.333 21.67 21.67 38.62 2.71
904 923 7.935338 AATTTGCATTACTGAGAACAAGTTG 57.065 32.000 0.00 0.00 0.00 3.16
906 925 7.491682 ACAAATTTGCATTACTGAGAACAAGT 58.508 30.769 18.12 0.00 0.00 3.16
937 956 6.022315 TCACCCAAAACCAATCAGGAATAAT 58.978 36.000 0.00 0.00 41.22 1.28
979 998 6.802608 ACATGTTTAATGATGCATCCAAGAG 58.197 36.000 23.67 9.80 0.00 2.85
994 1013 7.881643 GTAATGAACCATGCAACATGTTTAA 57.118 32.000 8.77 0.00 0.00 1.52
1025 1044 4.083271 GGGAAGCTGACATTTGTTGTAGAC 60.083 45.833 0.00 0.00 39.18 2.59
1035 1054 4.346418 AGAGATAATCGGGAAGCTGACATT 59.654 41.667 0.00 0.00 0.00 2.71
1046 1065 2.505405 TGGAGTCGAGAGATAATCGGG 58.495 52.381 0.00 0.00 45.19 5.14
1050 1069 6.778069 TGAGGTTATTGGAGTCGAGAGATAAT 59.222 38.462 0.00 0.00 45.19 1.28
1163 1190 1.609501 ACCTCAAGCCGTGGAGCTA 60.610 57.895 0.00 0.00 44.11 3.32
1212 1239 4.105217 TGGCAGATAGATGATGGAATGGTT 59.895 41.667 0.00 0.00 0.00 3.67
1230 1257 1.998315 CTCAGACGAGTCAATTGGCAG 59.002 52.381 13.47 8.36 34.29 4.85
1254 1281 5.178797 AGATTGTTTCGTGATAGGTCCAAG 58.821 41.667 0.00 0.00 0.00 3.61
1291 1318 0.896923 GGACCATTCCAGCATTGCAA 59.103 50.000 11.91 0.00 42.30 4.08
1305 1332 4.102524 ACTGAAGTATTGTTGTCTGGACCA 59.897 41.667 0.00 0.00 0.00 4.02
1307 1334 5.057149 ACACTGAAGTATTGTTGTCTGGAC 58.943 41.667 0.00 0.00 0.00 4.02
1308 1335 5.290493 ACACTGAAGTATTGTTGTCTGGA 57.710 39.130 0.00 0.00 0.00 3.86
1309 1336 4.452455 GGACACTGAAGTATTGTTGTCTGG 59.548 45.833 0.00 0.00 0.00 3.86
1321 1348 3.046374 AGTTTACCCTGGACACTGAAGT 58.954 45.455 0.00 0.00 0.00 3.01
1335 1362 6.223120 ACCAAATTGATTTGCAGAGTTTACC 58.777 36.000 10.26 0.00 44.32 2.85
1373 1400 7.663081 AGAAATCATTGTTGCTCAAGACTAGAA 59.337 33.333 0.00 0.00 39.55 2.10
1379 1406 4.154737 CCGAGAAATCATTGTTGCTCAAGA 59.845 41.667 0.00 0.00 39.55 3.02
1396 1423 6.946009 AGAAATTTAGGAAATTCACCCGAGAA 59.054 34.615 0.00 0.00 40.05 2.87
1401 1428 8.122472 TCTGAAGAAATTTAGGAAATTCACCC 57.878 34.615 0.00 0.00 40.05 4.61
1444 1471 9.566432 GAACCTATTGTATGAAAGATCAAGGAT 57.434 33.333 0.00 0.00 39.49 3.24
1486 1513 3.572255 TGCATTTTTCCTGGTAACCACTC 59.428 43.478 0.00 0.00 0.00 3.51
1499 1526 7.439056 TCAAGATTTCCAAGTCTTGCATTTTTC 59.561 33.333 16.04 0.00 46.79 2.29
1508 1535 5.694995 TCAACCTCAAGATTTCCAAGTCTT 58.305 37.500 0.00 0.00 35.15 3.01
1547 1574 4.459852 AAGTTGCTAGGAATATGGCCAT 57.540 40.909 24.45 24.45 0.00 4.40
1567 1594 6.385649 ACGAAGATTTGAAAGGCAAGTAAA 57.614 33.333 0.00 0.00 37.87 2.01
1579 1606 6.315393 GCTAGGTCCAAATAACGAAGATTTGA 59.685 38.462 17.16 6.38 43.85 2.69
1589 1616 2.704464 ACGGGCTAGGTCCAAATAAC 57.296 50.000 0.00 0.00 0.00 1.89
1600 1627 6.525578 TCCTGATATATTGTTACGGGCTAG 57.474 41.667 0.00 0.00 0.00 3.42
1697 1725 5.651530 TGTCGTCAAAAGCACCATTAAAAA 58.348 33.333 0.00 0.00 0.00 1.94
1704 1732 0.746204 TGCTGTCGTCAAAAGCACCA 60.746 50.000 0.00 0.00 41.83 4.17
1709 1755 0.592637 TGGCATGCTGTCGTCAAAAG 59.407 50.000 18.92 0.00 0.00 2.27
1716 1762 1.328680 GTGATTACTGGCATGCTGTCG 59.671 52.381 18.92 6.11 0.00 4.35
1737 1783 2.507339 AATCACGTGTTTGGCCTTTG 57.493 45.000 16.51 0.00 0.00 2.77
1782 1828 6.311200 TGTTACATGACAGATCAAGATTCACG 59.689 38.462 0.00 0.00 38.69 4.35
1857 1903 9.368416 AGCTGATTACTTGATAGGTTCATACTA 57.632 33.333 0.00 0.00 33.34 1.82
1861 1907 6.126652 ACCAGCTGATTACTTGATAGGTTCAT 60.127 38.462 17.39 0.00 33.34 2.57
1867 1913 4.302455 CCGACCAGCTGATTACTTGATAG 58.698 47.826 17.39 0.00 0.00 2.08
1885 1931 1.200020 CTTGTCTGGGATTTTGCCGAC 59.800 52.381 0.00 0.00 34.19 4.79
1900 1946 4.005650 TGCTTCAGATCACCAATCTTGTC 58.994 43.478 0.00 0.00 42.30 3.18
1945 1991 5.625311 GGATTTCACTAGAAAACTTGTTGCG 59.375 40.000 0.00 0.00 46.06 4.85
1960 2006 2.224209 ACAAACTCGACGGGATTTCACT 60.224 45.455 0.00 0.00 0.00 3.41
2100 2146 1.576272 AGAGGGTAGCCACATAGACCT 59.424 52.381 14.62 0.00 32.24 3.85
2122 2168 1.277557 ACTAGCAGAACAGCTCTTGGG 59.722 52.381 0.00 0.00 45.26 4.12
2129 2175 5.672321 GCATTTGAAGTACTAGCAGAACAGC 60.672 44.000 0.00 0.00 0.00 4.40
2146 2192 2.950975 TGACACTTTGCTCTGCATTTGA 59.049 40.909 0.00 0.00 38.76 2.69
2148 2194 3.491447 GGTTGACACTTTGCTCTGCATTT 60.491 43.478 0.00 0.00 38.76 2.32
2149 2195 2.035066 GGTTGACACTTTGCTCTGCATT 59.965 45.455 0.00 0.00 38.76 3.56
2605 2747 8.409358 AGAATAAGCTGTTTACAAAACAGGAT 57.591 30.769 25.67 9.58 45.72 3.24
2624 2766 6.206634 CACAACTTTTGGTCTGGCTAGAATAA 59.793 38.462 0.00 0.00 34.01 1.40
2633 2775 0.389025 GCCCACAACTTTTGGTCTGG 59.611 55.000 0.00 0.00 31.46 3.86
2637 2779 0.758123 CCATGCCCACAACTTTTGGT 59.242 50.000 0.00 0.00 31.46 3.67
2638 2780 0.758123 ACCATGCCCACAACTTTTGG 59.242 50.000 0.00 0.00 34.12 3.28
2639 2781 2.618442 AACCATGCCCACAACTTTTG 57.382 45.000 0.00 0.00 0.00 2.44
2640 2782 2.158827 GGAAACCATGCCCACAACTTTT 60.159 45.455 0.00 0.00 0.00 2.27
2645 2787 0.187117 TCAGGAAACCATGCCCACAA 59.813 50.000 0.00 0.00 0.00 3.33
2651 2793 3.383761 CAAACAACTCAGGAAACCATGC 58.616 45.455 0.00 0.00 0.00 4.06
2657 2799 1.673920 GACCGCAAACAACTCAGGAAA 59.326 47.619 0.00 0.00 0.00 3.13
2659 2801 0.468226 AGACCGCAAACAACTCAGGA 59.532 50.000 0.00 0.00 0.00 3.86
2661 2803 3.067106 ACATAGACCGCAAACAACTCAG 58.933 45.455 0.00 0.00 0.00 3.35
2664 2806 2.812011 GGAACATAGACCGCAAACAACT 59.188 45.455 0.00 0.00 0.00 3.16
2665 2807 2.812011 AGGAACATAGACCGCAAACAAC 59.188 45.455 0.00 0.00 0.00 3.32
2666 2808 2.811431 CAGGAACATAGACCGCAAACAA 59.189 45.455 0.00 0.00 0.00 2.83
2669 2829 1.003118 AGCAGGAACATAGACCGCAAA 59.997 47.619 0.00 0.00 0.00 3.68
2676 2836 2.302733 TGAGCACAAGCAGGAACATAGA 59.697 45.455 0.00 0.00 45.49 1.98
2685 2845 0.035881 TCCTTCCTGAGCACAAGCAG 59.964 55.000 0.00 0.00 45.49 4.24
2692 2852 3.044156 AGCATTATCTCCTTCCTGAGCA 58.956 45.455 0.00 0.00 32.22 4.26
2698 2858 4.400567 ACAAAAGCAGCATTATCTCCTTCC 59.599 41.667 0.00 0.00 0.00 3.46
2699 2859 5.573337 ACAAAAGCAGCATTATCTCCTTC 57.427 39.130 0.00 0.00 0.00 3.46
2707 2867 4.300803 CTGCAGAAACAAAAGCAGCATTA 58.699 39.130 8.42 0.00 46.51 1.90
2715 2875 1.410153 ACAGCCCTGCAGAAACAAAAG 59.590 47.619 17.39 0.00 0.00 2.27
2728 2888 6.321690 GGAACTACGATATATCATACAGCCCT 59.678 42.308 13.11 0.00 0.00 5.19
2748 2908 3.052081 AGTTCGCTCGCTGGAACT 58.948 55.556 8.41 8.41 45.89 3.01
2754 2914 2.504244 GTACGCAGTTCGCTCGCT 60.504 61.111 0.00 0.00 37.78 4.93
2759 2919 0.584876 AAAACAGGTACGCAGTTCGC 59.415 50.000 0.00 0.00 37.78 4.70
2777 2937 7.562088 AGACCAAATACTGAACCAAGGTAAAAA 59.438 33.333 0.00 0.00 0.00 1.94
2778 2938 7.013846 CAGACCAAATACTGAACCAAGGTAAAA 59.986 37.037 0.00 0.00 36.38 1.52
2781 2941 5.514136 CCAGACCAAATACTGAACCAAGGTA 60.514 44.000 0.00 0.00 36.38 3.08
2782 2942 4.398319 CAGACCAAATACTGAACCAAGGT 58.602 43.478 0.00 0.00 36.38 3.50
2783 2943 3.758554 CCAGACCAAATACTGAACCAAGG 59.241 47.826 0.00 0.00 36.38 3.61
2785 2945 4.715534 TCCAGACCAAATACTGAACCAA 57.284 40.909 0.00 0.00 36.38 3.67
2786 2946 4.715534 TTCCAGACCAAATACTGAACCA 57.284 40.909 0.00 0.00 36.38 3.67
2788 2948 8.038944 TGTAGTATTCCAGACCAAATACTGAAC 58.961 37.037 14.79 8.67 44.42 3.18
2789 2949 8.141298 TGTAGTATTCCAGACCAAATACTGAA 57.859 34.615 14.79 3.93 44.42 3.02
2790 2950 7.399191 ACTGTAGTATTCCAGACCAAATACTGA 59.601 37.037 14.79 4.36 44.42 3.41
2791 2951 7.556844 ACTGTAGTATTCCAGACCAAATACTG 58.443 38.462 14.79 0.00 44.42 2.74
2793 2953 8.038944 TGAACTGTAGTATTCCAGACCAAATAC 58.961 37.037 0.00 0.00 38.20 1.89
2794 2954 8.141298 TGAACTGTAGTATTCCAGACCAAATA 57.859 34.615 0.00 0.00 32.93 1.40
2795 2955 7.016153 TGAACTGTAGTATTCCAGACCAAAT 57.984 36.000 0.00 0.00 32.93 2.32
2797 2957 6.042781 ACTTGAACTGTAGTATTCCAGACCAA 59.957 38.462 0.00 0.00 32.93 3.67
2798 2958 5.542635 ACTTGAACTGTAGTATTCCAGACCA 59.457 40.000 0.00 0.00 32.93 4.02
2799 2959 6.038997 ACTTGAACTGTAGTATTCCAGACC 57.961 41.667 0.00 0.00 32.93 3.85
2800 2960 6.926313 AGACTTGAACTGTAGTATTCCAGAC 58.074 40.000 0.00 0.00 32.93 3.51
2801 2961 7.232737 TCAAGACTTGAACTGTAGTATTCCAGA 59.767 37.037 15.58 0.00 36.59 3.86
2802 2962 7.378966 TCAAGACTTGAACTGTAGTATTCCAG 58.621 38.462 15.58 0.00 36.59 3.86
2803 2963 7.015292 ACTCAAGACTTGAACTGTAGTATTCCA 59.985 37.037 18.26 0.00 39.58 3.53
2805 2965 8.301002 AGACTCAAGACTTGAACTGTAGTATTC 58.699 37.037 18.26 1.86 39.58 1.75
2806 2966 8.085296 CAGACTCAAGACTTGAACTGTAGTATT 58.915 37.037 26.76 10.99 39.58 1.89
2807 2967 7.448777 TCAGACTCAAGACTTGAACTGTAGTAT 59.551 37.037 29.95 17.02 41.05 2.12
2809 2969 5.594725 TCAGACTCAAGACTTGAACTGTAGT 59.405 40.000 29.95 20.48 41.05 2.73
2810 2970 6.078202 TCAGACTCAAGACTTGAACTGTAG 57.922 41.667 29.95 18.33 41.05 2.74
2811 2971 6.465439 TTCAGACTCAAGACTTGAACTGTA 57.535 37.500 29.95 24.39 41.05 2.74
2812 2972 5.344743 TTCAGACTCAAGACTTGAACTGT 57.655 39.130 29.95 21.50 41.05 3.55
2836 3118 9.797556 TTCATTATCATTGCTTCAAATTCAGAG 57.202 29.630 0.00 0.00 0.00 3.35
2844 3126 5.879777 TCGTCCTTCATTATCATTGCTTCAA 59.120 36.000 0.00 0.00 0.00 2.69
2854 3136 2.667137 CGCCTCTCGTCCTTCATTATC 58.333 52.381 0.00 0.00 0.00 1.75
2879 3161 1.404391 CAGGTGAGCAATCAATCAGGC 59.596 52.381 0.00 0.00 0.00 4.85
2883 3165 1.466856 TGCCAGGTGAGCAATCAATC 58.533 50.000 0.00 0.00 37.28 2.67
2885 3167 3.435846 TTGCCAGGTGAGCAATCAA 57.564 47.368 0.00 0.00 44.95 2.57
2891 3173 2.633509 CCTGCTTTGCCAGGTGAGC 61.634 63.158 0.10 4.43 45.87 4.26
2892 3174 3.677527 CCTGCTTTGCCAGGTGAG 58.322 61.111 0.10 0.00 45.87 3.51
2901 3183 1.457346 CCTCTTGCCTACCTGCTTTG 58.543 55.000 0.00 0.00 0.00 2.77
2902 3184 0.329596 CCCTCTTGCCTACCTGCTTT 59.670 55.000 0.00 0.00 0.00 3.51
2917 3199 0.901124 AGCATCAGTCAGTGTCCCTC 59.099 55.000 0.00 0.00 0.00 4.30
2942 3224 7.713764 ATGTTACCAGCACAAATTCTTTTTC 57.286 32.000 0.00 0.00 0.00 2.29
2999 3284 5.392380 GCATGCTGGATACTAATTGCCATAC 60.392 44.000 11.37 0.00 37.61 2.39
3002 3287 2.886523 GCATGCTGGATACTAATTGCCA 59.113 45.455 11.37 0.00 37.61 4.92
3003 3288 2.229784 GGCATGCTGGATACTAATTGCC 59.770 50.000 18.92 0.00 40.91 4.52
3014 3299 1.927487 AACATTTCAGGCATGCTGGA 58.073 45.000 18.92 12.54 0.00 3.86
3020 3305 3.810941 CAGCAAACAAACATTTCAGGCAT 59.189 39.130 0.00 0.00 0.00 4.40
3062 3348 9.098355 TGTGTGAAATACTACAGAAATATCAGC 57.902 33.333 0.00 0.00 0.00 4.26
3113 3399 3.873410 TGGAAGTATTGCACCATCTGTGG 60.873 47.826 0.00 0.00 43.23 4.17
3114 3400 3.346315 TGGAAGTATTGCACCATCTGTG 58.654 45.455 0.00 0.00 43.23 3.66
3115 3401 3.614092 CTGGAAGTATTGCACCATCTGT 58.386 45.455 0.00 0.00 43.23 3.41
3132 3418 9.201989 ACACTTACAATTCTGATCTATACTGGA 57.798 33.333 0.00 0.00 0.00 3.86
3133 3419 9.823647 AACACTTACAATTCTGATCTATACTGG 57.176 33.333 0.00 0.00 0.00 4.00
3139 3425 9.871238 GAACCTAACACTTACAATTCTGATCTA 57.129 33.333 0.00 0.00 0.00 1.98
3140 3426 8.598041 AGAACCTAACACTTACAATTCTGATCT 58.402 33.333 0.00 0.00 0.00 2.75
3141 3427 8.660373 CAGAACCTAACACTTACAATTCTGATC 58.340 37.037 4.98 0.00 42.77 2.92
3142 3428 8.157476 ACAGAACCTAACACTTACAATTCTGAT 58.843 33.333 15.46 0.51 42.77 2.90
3143 3429 7.506114 ACAGAACCTAACACTTACAATTCTGA 58.494 34.615 15.46 0.00 42.77 3.27
3144 3430 7.730364 ACAGAACCTAACACTTACAATTCTG 57.270 36.000 8.66 8.66 44.65 3.02
3149 3435 9.268268 CAGAATTACAGAACCTAACACTTACAA 57.732 33.333 0.00 0.00 0.00 2.41
3150 3436 8.644216 TCAGAATTACAGAACCTAACACTTACA 58.356 33.333 0.00 0.00 0.00 2.41
3151 3437 9.485206 TTCAGAATTACAGAACCTAACACTTAC 57.515 33.333 0.00 0.00 0.00 2.34
3153 3439 8.974060 TTTCAGAATTACAGAACCTAACACTT 57.026 30.769 0.00 0.00 0.00 3.16
3154 3440 9.220767 GATTTCAGAATTACAGAACCTAACACT 57.779 33.333 0.00 0.00 0.00 3.55
3155 3441 9.220767 AGATTTCAGAATTACAGAACCTAACAC 57.779 33.333 0.00 0.00 0.00 3.32
3156 3442 9.219603 CAGATTTCAGAATTACAGAACCTAACA 57.780 33.333 0.00 0.00 0.00 2.41
3157 3443 9.436957 TCAGATTTCAGAATTACAGAACCTAAC 57.563 33.333 0.00 0.00 0.00 2.34
3160 3446 9.171877 GATTCAGATTTCAGAATTACAGAACCT 57.828 33.333 0.53 0.00 33.15 3.50
3161 3447 8.950210 TGATTCAGATTTCAGAATTACAGAACC 58.050 33.333 0.53 0.00 33.15 3.62
3165 3451 9.270576 CGTTTGATTCAGATTTCAGAATTACAG 57.729 33.333 0.53 0.00 33.15 2.74
3166 3452 7.750458 GCGTTTGATTCAGATTTCAGAATTACA 59.250 33.333 0.53 0.00 33.15 2.41
3167 3453 7.750458 TGCGTTTGATTCAGATTTCAGAATTAC 59.250 33.333 0.53 0.59 33.15 1.89
3168 3454 7.815641 TGCGTTTGATTCAGATTTCAGAATTA 58.184 30.769 0.53 0.00 33.15 1.40
3169 3455 6.680810 TGCGTTTGATTCAGATTTCAGAATT 58.319 32.000 0.53 0.00 33.15 2.17
3170 3456 6.258230 TGCGTTTGATTCAGATTTCAGAAT 57.742 33.333 0.00 0.00 35.25 2.40
3171 3457 5.687770 TGCGTTTGATTCAGATTTCAGAA 57.312 34.783 0.00 0.00 0.00 3.02
3172 3458 5.687770 TTGCGTTTGATTCAGATTTCAGA 57.312 34.783 0.00 0.00 0.00 3.27
3173 3459 4.322804 GCTTGCGTTTGATTCAGATTTCAG 59.677 41.667 0.00 0.00 0.00 3.02
3174 3460 4.022935 AGCTTGCGTTTGATTCAGATTTCA 60.023 37.500 0.00 0.00 0.00 2.69
3175 3461 4.322804 CAGCTTGCGTTTGATTCAGATTTC 59.677 41.667 0.00 0.00 0.00 2.17
3176 3462 4.232221 CAGCTTGCGTTTGATTCAGATTT 58.768 39.130 0.00 0.00 0.00 2.17
3177 3463 3.829948 CAGCTTGCGTTTGATTCAGATT 58.170 40.909 0.00 0.00 0.00 2.40
3178 3464 2.415090 GCAGCTTGCGTTTGATTCAGAT 60.415 45.455 0.00 0.00 31.71 2.90
3179 3465 1.069022 GCAGCTTGCGTTTGATTCAGA 60.069 47.619 0.00 0.00 31.71 3.27
3180 3466 1.334054 GCAGCTTGCGTTTGATTCAG 58.666 50.000 0.00 0.00 31.71 3.02
3181 3467 3.477504 GCAGCTTGCGTTTGATTCA 57.522 47.368 0.00 0.00 31.71 2.57
3191 3477 1.370900 CCGACAGTTTGCAGCTTGC 60.371 57.895 0.00 1.70 45.29 4.01
3192 3478 1.165907 TCCCGACAGTTTGCAGCTTG 61.166 55.000 0.00 0.00 0.00 4.01
3193 3479 1.148273 TCCCGACAGTTTGCAGCTT 59.852 52.632 0.00 0.00 0.00 3.74
3194 3480 1.598130 GTCCCGACAGTTTGCAGCT 60.598 57.895 0.00 0.00 0.00 4.24
3195 3481 1.598130 AGTCCCGACAGTTTGCAGC 60.598 57.895 0.00 0.00 0.00 5.25
3196 3482 0.249868 TCAGTCCCGACAGTTTGCAG 60.250 55.000 0.00 0.00 0.00 4.41
3197 3483 0.179234 TTCAGTCCCGACAGTTTGCA 59.821 50.000 0.00 0.00 0.00 4.08
3198 3484 1.523758 ATTCAGTCCCGACAGTTTGC 58.476 50.000 0.00 0.00 0.00 3.68
3199 3485 4.290155 CAAAATTCAGTCCCGACAGTTTG 58.710 43.478 0.00 0.00 0.00 2.93
3200 3486 3.317993 CCAAAATTCAGTCCCGACAGTTT 59.682 43.478 0.00 0.00 0.00 2.66
3201 3487 2.884639 CCAAAATTCAGTCCCGACAGTT 59.115 45.455 0.00 0.00 0.00 3.16
3202 3488 2.158667 ACCAAAATTCAGTCCCGACAGT 60.159 45.455 0.00 0.00 0.00 3.55
3203 3489 2.226437 CACCAAAATTCAGTCCCGACAG 59.774 50.000 0.00 0.00 0.00 3.51
3204 3490 2.158740 TCACCAAAATTCAGTCCCGACA 60.159 45.455 0.00 0.00 0.00 4.35
3205 3491 2.500229 TCACCAAAATTCAGTCCCGAC 58.500 47.619 0.00 0.00 0.00 4.79
3206 3492 2.940994 TCACCAAAATTCAGTCCCGA 57.059 45.000 0.00 0.00 0.00 5.14
3207 3493 4.006989 TGTATCACCAAAATTCAGTCCCG 58.993 43.478 0.00 0.00 0.00 5.14
3208 3494 5.253330 TCTGTATCACCAAAATTCAGTCCC 58.747 41.667 0.00 0.00 0.00 4.46
3209 3495 6.431234 AGTTCTGTATCACCAAAATTCAGTCC 59.569 38.462 0.00 0.00 0.00 3.85
3210 3496 7.440523 AGTTCTGTATCACCAAAATTCAGTC 57.559 36.000 0.00 0.00 0.00 3.51
3211 3497 7.255590 CCAAGTTCTGTATCACCAAAATTCAGT 60.256 37.037 0.00 0.00 0.00 3.41
3212 3498 7.086376 CCAAGTTCTGTATCACCAAAATTCAG 58.914 38.462 0.00 0.00 0.00 3.02
3213 3499 6.549364 ACCAAGTTCTGTATCACCAAAATTCA 59.451 34.615 0.00 0.00 0.00 2.57
3214 3500 6.863126 CACCAAGTTCTGTATCACCAAAATTC 59.137 38.462 0.00 0.00 0.00 2.17
3215 3501 6.738453 GCACCAAGTTCTGTATCACCAAAATT 60.738 38.462 0.00 0.00 0.00 1.82
3216 3502 5.278957 GCACCAAGTTCTGTATCACCAAAAT 60.279 40.000 0.00 0.00 0.00 1.82
3217 3503 4.037446 GCACCAAGTTCTGTATCACCAAAA 59.963 41.667 0.00 0.00 0.00 2.44
3218 3504 3.568007 GCACCAAGTTCTGTATCACCAAA 59.432 43.478 0.00 0.00 0.00 3.28
3219 3505 3.146066 GCACCAAGTTCTGTATCACCAA 58.854 45.455 0.00 0.00 0.00 3.67
3220 3506 2.105649 TGCACCAAGTTCTGTATCACCA 59.894 45.455 0.00 0.00 0.00 4.17
3221 3507 2.778299 TGCACCAAGTTCTGTATCACC 58.222 47.619 0.00 0.00 0.00 4.02
3222 3508 3.753272 ACATGCACCAAGTTCTGTATCAC 59.247 43.478 0.00 0.00 0.00 3.06
3223 3509 4.019792 ACATGCACCAAGTTCTGTATCA 57.980 40.909 0.00 0.00 0.00 2.15
3224 3510 5.419542 TCTACATGCACCAAGTTCTGTATC 58.580 41.667 0.00 0.00 0.00 2.24
3225 3511 5.420725 TCTACATGCACCAAGTTCTGTAT 57.579 39.130 0.00 0.00 0.00 2.29
3226 3512 4.882842 TCTACATGCACCAAGTTCTGTA 57.117 40.909 0.00 0.00 0.00 2.74
3227 3513 3.769739 TCTACATGCACCAAGTTCTGT 57.230 42.857 0.00 0.00 0.00 3.41
3228 3514 5.633830 AATTCTACATGCACCAAGTTCTG 57.366 39.130 0.00 0.00 0.00 3.02
3229 3515 6.942576 ACTAAATTCTACATGCACCAAGTTCT 59.057 34.615 0.00 0.00 0.00 3.01
3230 3516 7.145932 ACTAAATTCTACATGCACCAAGTTC 57.854 36.000 0.00 0.00 0.00 3.01
3231 3517 7.883311 ACTACTAAATTCTACATGCACCAAGTT 59.117 33.333 0.00 0.00 0.00 2.66
3232 3518 7.394816 ACTACTAAATTCTACATGCACCAAGT 58.605 34.615 0.00 0.00 0.00 3.16
3233 3519 7.849804 ACTACTAAATTCTACATGCACCAAG 57.150 36.000 0.00 0.00 0.00 3.61
3234 3520 9.899661 ATTACTACTAAATTCTACATGCACCAA 57.100 29.630 0.00 0.00 0.00 3.67
3235 3521 9.542462 GATTACTACTAAATTCTACATGCACCA 57.458 33.333 0.00 0.00 0.00 4.17
3236 3522 9.765795 AGATTACTACTAAATTCTACATGCACC 57.234 33.333 0.00 0.00 0.00 5.01
3255 3541 9.461312 TGTTGGCAAAGACAAATATAGATTACT 57.539 29.630 0.00 0.00 29.78 2.24
3258 3544 8.970020 TCATGTTGGCAAAGACAAATATAGATT 58.030 29.630 0.00 0.00 29.78 2.40
3259 3545 8.523915 TCATGTTGGCAAAGACAAATATAGAT 57.476 30.769 0.00 0.00 29.78 1.98
3260 3546 7.936496 TCATGTTGGCAAAGACAAATATAGA 57.064 32.000 0.00 0.00 29.78 1.98
3261 3547 8.407832 TCATCATGTTGGCAAAGACAAATATAG 58.592 33.333 0.00 0.00 29.78 1.31
3262 3548 8.291191 TCATCATGTTGGCAAAGACAAATATA 57.709 30.769 0.00 0.00 29.78 0.86
3263 3549 7.172868 TCATCATGTTGGCAAAGACAAATAT 57.827 32.000 0.00 0.00 29.78 1.28
3264 3550 6.587206 TCATCATGTTGGCAAAGACAAATA 57.413 33.333 0.00 0.00 29.78 1.40
3265 3551 5.471556 TCATCATGTTGGCAAAGACAAAT 57.528 34.783 0.00 0.00 29.78 2.32
3266 3552 4.933505 TCATCATGTTGGCAAAGACAAA 57.066 36.364 0.00 0.00 29.78 2.83
3267 3553 5.010820 TGAATCATCATGTTGGCAAAGACAA 59.989 36.000 0.00 0.00 0.00 3.18
3268 3554 4.523558 TGAATCATCATGTTGGCAAAGACA 59.476 37.500 0.00 0.00 0.00 3.41
3269 3555 5.063180 TGAATCATCATGTTGGCAAAGAC 57.937 39.130 0.00 0.00 0.00 3.01
3270 3556 4.158949 CCTGAATCATCATGTTGGCAAAGA 59.841 41.667 0.00 0.64 34.37 2.52
3271 3557 4.430007 CCTGAATCATCATGTTGGCAAAG 58.570 43.478 0.00 0.00 34.37 2.77
3272 3558 3.368635 GCCTGAATCATCATGTTGGCAAA 60.369 43.478 0.00 0.00 40.87 3.68
3273 3559 2.166870 GCCTGAATCATCATGTTGGCAA 59.833 45.455 0.00 0.00 40.87 4.52
3274 3560 1.752498 GCCTGAATCATCATGTTGGCA 59.248 47.619 3.98 0.00 40.87 4.92
3275 3561 1.752498 TGCCTGAATCATCATGTTGGC 59.248 47.619 3.98 1.08 41.32 4.52
3276 3562 3.383505 ACATGCCTGAATCATCATGTTGG 59.616 43.478 18.86 2.63 44.83 3.77
3277 3563 4.649088 ACATGCCTGAATCATCATGTTG 57.351 40.909 18.86 0.00 44.83 3.33
3278 3564 5.687780 TCTACATGCCTGAATCATCATGTT 58.312 37.500 25.12 15.14 44.83 2.71
3280 3566 6.206829 ACATTCTACATGCCTGAATCATCATG 59.793 38.462 17.91 17.91 41.35 3.07
3281 3567 6.304624 ACATTCTACATGCCTGAATCATCAT 58.695 36.000 0.00 0.00 34.37 2.45
3282 3568 5.687780 ACATTCTACATGCCTGAATCATCA 58.312 37.500 0.00 0.00 0.00 3.07
3283 3569 7.625817 GCATACATTCTACATGCCTGAATCATC 60.626 40.741 0.00 0.00 39.30 2.92
3284 3570 6.150641 GCATACATTCTACATGCCTGAATCAT 59.849 38.462 0.00 0.00 39.30 2.45
3285 3571 5.471116 GCATACATTCTACATGCCTGAATCA 59.529 40.000 0.00 0.00 39.30 2.57
3286 3572 5.471116 TGCATACATTCTACATGCCTGAATC 59.529 40.000 0.00 0.00 43.51 2.52
3287 3573 5.379187 TGCATACATTCTACATGCCTGAAT 58.621 37.500 0.00 0.00 43.51 2.57
3288 3574 4.779696 TGCATACATTCTACATGCCTGAA 58.220 39.130 0.00 0.00 43.51 3.02
3289 3575 4.420522 TGCATACATTCTACATGCCTGA 57.579 40.909 0.00 0.00 43.51 3.86
3290 3576 4.336153 TGTTGCATACATTCTACATGCCTG 59.664 41.667 0.00 0.00 43.51 4.85
3291 3577 4.525996 TGTTGCATACATTCTACATGCCT 58.474 39.130 0.00 0.00 43.51 4.75
3292 3578 4.576053 TCTGTTGCATACATTCTACATGCC 59.424 41.667 0.00 0.00 43.51 4.40
3293 3579 5.739752 TCTGTTGCATACATTCTACATGC 57.260 39.130 0.00 0.00 44.23 4.06
3294 3580 6.183360 TGCTTCTGTTGCATACATTCTACATG 60.183 38.462 0.00 0.00 35.85 3.21
3295 3581 5.882000 TGCTTCTGTTGCATACATTCTACAT 59.118 36.000 0.00 0.00 35.85 2.29
3296 3582 5.244755 TGCTTCTGTTGCATACATTCTACA 58.755 37.500 0.00 0.00 35.85 2.74
3297 3583 5.801350 TGCTTCTGTTGCATACATTCTAC 57.199 39.130 0.00 0.00 35.85 2.59
3298 3584 5.163864 CGTTGCTTCTGTTGCATACATTCTA 60.164 40.000 0.00 0.00 40.34 2.10
3299 3585 4.378770 CGTTGCTTCTGTTGCATACATTCT 60.379 41.667 0.00 0.00 40.34 2.40
3300 3586 3.848019 CGTTGCTTCTGTTGCATACATTC 59.152 43.478 0.00 0.00 40.34 2.67
3301 3587 3.825308 CGTTGCTTCTGTTGCATACATT 58.175 40.909 0.00 0.00 40.34 2.71
3302 3588 2.414559 GCGTTGCTTCTGTTGCATACAT 60.415 45.455 0.00 0.00 40.34 2.29
3303 3589 1.069296 GCGTTGCTTCTGTTGCATACA 60.069 47.619 0.00 0.00 40.34 2.29
3304 3590 1.606606 GCGTTGCTTCTGTTGCATAC 58.393 50.000 0.00 0.00 40.34 2.39
3305 3591 0.521291 GGCGTTGCTTCTGTTGCATA 59.479 50.000 0.00 0.00 40.34 3.14
3306 3592 1.286880 GGCGTTGCTTCTGTTGCAT 59.713 52.632 0.00 0.00 40.34 3.96
3307 3593 2.721231 GGCGTTGCTTCTGTTGCA 59.279 55.556 0.00 0.00 38.80 4.08
3308 3594 2.050077 GGGCGTTGCTTCTGTTGC 60.050 61.111 0.00 0.00 0.00 4.17
3309 3595 0.102120 TTTGGGCGTTGCTTCTGTTG 59.898 50.000 0.00 0.00 0.00 3.33
3310 3596 1.000274 GATTTGGGCGTTGCTTCTGTT 60.000 47.619 0.00 0.00 0.00 3.16
3311 3597 0.598065 GATTTGGGCGTTGCTTCTGT 59.402 50.000 0.00 0.00 0.00 3.41
3312 3598 0.597568 TGATTTGGGCGTTGCTTCTG 59.402 50.000 0.00 0.00 0.00 3.02
3313 3599 0.883833 CTGATTTGGGCGTTGCTTCT 59.116 50.000 0.00 0.00 0.00 2.85
3314 3600 0.598065 ACTGATTTGGGCGTTGCTTC 59.402 50.000 0.00 0.00 0.00 3.86
3315 3601 0.314935 CACTGATTTGGGCGTTGCTT 59.685 50.000 0.00 0.00 0.00 3.91
3316 3602 0.823356 ACACTGATTTGGGCGTTGCT 60.823 50.000 0.00 0.00 0.00 3.91
3317 3603 0.031994 AACACTGATTTGGGCGTTGC 59.968 50.000 0.00 0.00 0.00 4.17
3318 3604 1.336440 TGAACACTGATTTGGGCGTTG 59.664 47.619 0.00 0.00 0.00 4.10
3319 3605 1.608590 CTGAACACTGATTTGGGCGTT 59.391 47.619 0.00 0.00 0.00 4.84
3320 3606 1.238439 CTGAACACTGATTTGGGCGT 58.762 50.000 0.00 0.00 0.00 5.68
3321 3607 1.197721 GACTGAACACTGATTTGGGCG 59.802 52.381 0.00 0.00 0.00 6.13
3322 3608 2.227388 CAGACTGAACACTGATTTGGGC 59.773 50.000 0.00 0.00 36.38 5.36
3323 3609 2.227388 GCAGACTGAACACTGATTTGGG 59.773 50.000 6.65 0.00 36.38 4.12
3324 3610 2.880268 TGCAGACTGAACACTGATTTGG 59.120 45.455 6.65 0.00 36.38 3.28
3325 3611 3.304257 GGTGCAGACTGAACACTGATTTG 60.304 47.826 15.69 0.00 36.38 2.32
3326 3612 2.880890 GGTGCAGACTGAACACTGATTT 59.119 45.455 15.69 0.00 36.38 2.17
3327 3613 2.158769 TGGTGCAGACTGAACACTGATT 60.159 45.455 15.69 0.00 36.38 2.57
3328 3614 1.417517 TGGTGCAGACTGAACACTGAT 59.582 47.619 15.69 0.00 36.38 2.90
3329 3615 0.829990 TGGTGCAGACTGAACACTGA 59.170 50.000 15.69 0.00 36.38 3.41
3330 3616 1.802960 GATGGTGCAGACTGAACACTG 59.197 52.381 15.69 0.00 34.70 3.66
3331 3617 1.696336 AGATGGTGCAGACTGAACACT 59.304 47.619 15.69 8.34 34.70 3.55
3332 3618 1.802960 CAGATGGTGCAGACTGAACAC 59.197 52.381 15.69 9.90 32.90 3.32
3333 3619 1.693606 TCAGATGGTGCAGACTGAACA 59.306 47.619 15.69 5.59 36.63 3.18
3334 3620 2.462456 TCAGATGGTGCAGACTGAAC 57.538 50.000 6.65 5.69 36.63 3.18
3335 3621 3.490439 TTTCAGATGGTGCAGACTGAA 57.510 42.857 6.65 15.75 44.13 3.02
3336 3622 3.262660 AGATTTCAGATGGTGCAGACTGA 59.737 43.478 6.65 7.62 37.56 3.41
3337 3623 3.374367 CAGATTTCAGATGGTGCAGACTG 59.626 47.826 0.00 0.00 0.00 3.51
3338 3624 3.607741 CAGATTTCAGATGGTGCAGACT 58.392 45.455 0.00 0.00 0.00 3.24
3339 3625 2.097142 GCAGATTTCAGATGGTGCAGAC 59.903 50.000 0.00 0.00 0.00 3.51
3340 3626 2.362736 GCAGATTTCAGATGGTGCAGA 58.637 47.619 0.00 0.00 0.00 4.26
3341 3627 1.404391 GGCAGATTTCAGATGGTGCAG 59.596 52.381 0.00 0.00 32.42 4.41
3342 3628 1.466856 GGCAGATTTCAGATGGTGCA 58.533 50.000 0.00 0.00 32.42 4.57
3343 3629 0.379669 CGGCAGATTTCAGATGGTGC 59.620 55.000 0.00 0.00 0.00 5.01
3344 3630 0.379669 GCGGCAGATTTCAGATGGTG 59.620 55.000 0.00 0.00 0.00 4.17
3345 3631 0.749454 GGCGGCAGATTTCAGATGGT 60.749 55.000 3.07 0.00 0.00 3.55
3346 3632 0.465097 AGGCGGCAGATTTCAGATGG 60.465 55.000 13.08 0.00 0.00 3.51
3347 3633 1.869767 GTAGGCGGCAGATTTCAGATG 59.130 52.381 13.08 0.00 0.00 2.90
3348 3634 1.486310 TGTAGGCGGCAGATTTCAGAT 59.514 47.619 13.08 0.00 0.00 2.90
3349 3635 0.901827 TGTAGGCGGCAGATTTCAGA 59.098 50.000 13.08 0.00 0.00 3.27
3350 3636 1.293924 CTGTAGGCGGCAGATTTCAG 58.706 55.000 13.08 6.25 36.12 3.02
3351 3637 0.107703 CCTGTAGGCGGCAGATTTCA 60.108 55.000 13.08 0.00 36.12 2.69
3352 3638 0.107654 ACCTGTAGGCGGCAGATTTC 60.108 55.000 13.08 0.00 39.32 2.17
3353 3639 0.328258 AACCTGTAGGCGGCAGATTT 59.672 50.000 13.08 0.00 39.32 2.17
3354 3640 0.328258 AAACCTGTAGGCGGCAGATT 59.672 50.000 13.08 0.00 39.32 2.40
3355 3641 0.392998 CAAACCTGTAGGCGGCAGAT 60.393 55.000 13.08 0.00 39.32 2.90
3356 3642 1.003839 CAAACCTGTAGGCGGCAGA 60.004 57.895 13.08 0.00 39.32 4.26
3357 3643 1.298859 GACAAACCTGTAGGCGGCAG 61.299 60.000 13.08 0.00 39.32 4.85
3358 3644 1.302192 GACAAACCTGTAGGCGGCA 60.302 57.895 13.08 0.00 39.32 5.69
3359 3645 2.038837 GGACAAACCTGTAGGCGGC 61.039 63.158 0.00 0.00 39.32 6.53
3360 3646 1.740296 CGGACAAACCTGTAGGCGG 60.740 63.158 0.00 0.00 39.32 6.13
3361 3647 1.740296 CCGGACAAACCTGTAGGCG 60.740 63.158 0.00 0.00 39.32 5.52
3362 3648 2.038837 GCCGGACAAACCTGTAGGC 61.039 63.158 5.05 8.01 45.97 3.93
3363 3649 1.376812 GGCCGGACAAACCTGTAGG 60.377 63.158 5.05 0.00 35.30 3.18
3364 3650 1.677552 AGGCCGGACAAACCTGTAG 59.322 57.895 11.69 0.00 35.30 2.74
3365 3651 3.894832 AGGCCGGACAAACCTGTA 58.105 55.556 11.69 0.00 35.30 2.74


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.