Multiple sequence alignment - TraesCS4B01G005100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G005100 chr4B 100.000 5606 0 0 1 5606 3731446 3737051 0.000000e+00 10353.0
1 TraesCS4B01G005100 chr4B 86.466 1692 211 10 2334 4022 3340186 3338510 0.000000e+00 1840.0
2 TraesCS4B01G005100 chr4B 86.105 1425 174 15 636 2045 3484596 3483181 0.000000e+00 1513.0
3 TraesCS4B01G005100 chr4B 86.105 1425 175 14 636 2045 3514570 3513154 0.000000e+00 1513.0
4 TraesCS4B01G005100 chr4B 86.612 1337 161 10 636 1958 3454482 3453150 0.000000e+00 1461.0
5 TraesCS4B01G005100 chr4B 87.918 1225 109 20 4030 5221 3337652 3336434 0.000000e+00 1406.0
6 TraesCS4B01G005100 chr4B 85.320 1233 174 7 830 2059 3342512 3341284 0.000000e+00 1267.0
7 TraesCS4B01G005100 chr4B 87.763 1046 110 10 636 1668 3428005 3426965 0.000000e+00 1206.0
8 TraesCS4B01G005100 chr4B 89.409 406 24 4 5220 5606 57268991 57268586 1.400000e-135 494.0
9 TraesCS4B01G005100 chrUn 93.255 4166 249 20 638 4785 47629861 47634012 0.000000e+00 6107.0
10 TraesCS4B01G005100 chrUn 94.756 3852 163 14 715 4558 47450560 47454380 0.000000e+00 5958.0
11 TraesCS4B01G005100 chrUn 84.877 2202 266 23 2341 4517 47660277 47662436 0.000000e+00 2159.0
12 TraesCS4B01G005100 chrUn 86.246 1425 173 15 636 2045 48044510 48045926 0.000000e+00 1524.0
13 TraesCS4B01G005100 chrUn 86.175 1425 174 15 636 2045 48074781 48076197 0.000000e+00 1519.0
14 TraesCS4B01G005100 chrUn 92.857 392 24 1 4812 5203 47634011 47634398 2.930000e-157 566.0
15 TraesCS4B01G005100 chrUn 90.148 406 21 4 5220 5606 93151336 93151741 1.390000e-140 510.0
16 TraesCS4B01G005100 chrUn 89.409 406 24 4 5220 5606 28989966 28989561 1.400000e-135 494.0
17 TraesCS4B01G005100 chrUn 89.409 406 24 7 5220 5606 368559322 368558917 1.400000e-135 494.0
18 TraesCS4B01G005100 chrUn 97.233 253 7 0 349 601 47448790 47449042 4.010000e-116 429.0
19 TraesCS4B01G005100 chrUn 94.922 256 13 0 631 886 47450306 47450561 8.750000e-108 401.0
20 TraesCS4B01G005100 chrUn 82.857 350 27 15 66 402 47435329 47435658 3.310000e-72 283.0
21 TraesCS4B01G005100 chrUn 98.276 58 1 0 465 522 47435689 47435746 9.940000e-18 102.0
22 TraesCS4B01G005100 chrUn 92.157 51 4 0 19 69 47448142 47448192 7.790000e-09 73.1
23 TraesCS4B01G005100 chr4D 91.078 3721 293 14 822 4537 1821788 1825474 0.000000e+00 4996.0
24 TraesCS4B01G005100 chr4D 87.935 2213 246 14 2331 4537 1874697 1876894 0.000000e+00 2588.0
25 TraesCS4B01G005100 chr4A 88.584 2190 235 8 2335 4521 602872952 602875129 0.000000e+00 2645.0
26 TraesCS4B01G005100 chr4A 86.134 2214 264 20 2335 4539 602609796 602611975 0.000000e+00 2348.0
27 TraesCS4B01G005100 chr4A 93.362 934 56 4 2791 3724 602726157 602727084 0.000000e+00 1376.0
28 TraesCS4B01G005100 chr4A 86.859 936 112 5 3544 4475 602722320 602723248 0.000000e+00 1037.0
29 TraesCS4B01G005100 chr4A 82.947 475 63 8 4078 4551 602725320 602725777 4.040000e-111 412.0
30 TraesCS4B01G005100 chr4A 83.260 454 25 14 148 601 602869014 602869416 2.470000e-98 370.0
31 TraesCS4B01G005100 chr4A 89.655 58 6 0 4566 4623 602875369 602875426 2.170000e-09 75.0
32 TraesCS4B01G005100 chr1B 74.188 2185 496 52 2335 4489 628618555 628616409 0.000000e+00 848.0
33 TraesCS4B01G005100 chr1A 75.918 1661 355 35 2335 3977 550636076 550634443 0.000000e+00 809.0
34 TraesCS4B01G005100 chr1D 75.616 1665 361 35 2335 3981 458145197 458143560 0.000000e+00 784.0
35 TraesCS4B01G005100 chr1D 89.901 406 22 6 5220 5606 476679473 476679878 6.480000e-139 505.0
36 TraesCS4B01G005100 chr1D 89.286 308 14 6 5318 5606 132202785 132202478 8.870000e-98 368.0
37 TraesCS4B01G005100 chr1D 89.388 245 7 4 5381 5606 323645878 323645634 1.980000e-74 291.0
38 TraesCS4B01G005100 chr6D 91.872 406 14 4 5220 5606 23015427 23015832 2.950000e-152 549.0
39 TraesCS4B01G005100 chr6D 88.943 407 25 4 5220 5606 12544617 12545023 8.440000e-133 484.0
40 TraesCS4B01G005100 chr3D 90.394 406 20 4 5220 5606 461407319 461407724 2.990000e-142 516.0
41 TraesCS4B01G005100 chr3D 89.655 406 23 4 5220 5606 22676725 22676320 3.020000e-137 499.0
42 TraesCS4B01G005100 chr5A 89.901 406 22 4 5220 5606 709610186 709609781 6.480000e-139 505.0
43 TraesCS4B01G005100 chr2D 89.901 406 22 4 5220 5606 73271558 73271963 6.480000e-139 505.0
44 TraesCS4B01G005100 chr7B 89.163 406 25 4 5220 5606 695133630 695133225 6.530000e-134 488.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G005100 chr4B 3731446 3737051 5605 False 10353.000000 10353 100.000000 1 5606 1 chr4B.!!$F1 5605
1 TraesCS4B01G005100 chr4B 3483181 3484596 1415 True 1513.000000 1513 86.105000 636 2045 1 chr4B.!!$R3 1409
2 TraesCS4B01G005100 chr4B 3513154 3514570 1416 True 1513.000000 1513 86.105000 636 2045 1 chr4B.!!$R4 1409
3 TraesCS4B01G005100 chr4B 3336434 3342512 6078 True 1504.333333 1840 86.568000 830 5221 3 chr4B.!!$R6 4391
4 TraesCS4B01G005100 chr4B 3453150 3454482 1332 True 1461.000000 1461 86.612000 636 1958 1 chr4B.!!$R2 1322
5 TraesCS4B01G005100 chr4B 3426965 3428005 1040 True 1206.000000 1206 87.763000 636 1668 1 chr4B.!!$R1 1032
6 TraesCS4B01G005100 chrUn 47629861 47634398 4537 False 3336.500000 6107 93.056000 638 5203 2 chrUn.!!$F7 4565
7 TraesCS4B01G005100 chrUn 47660277 47662436 2159 False 2159.000000 2159 84.877000 2341 4517 1 chrUn.!!$F1 2176
8 TraesCS4B01G005100 chrUn 47448142 47454380 6238 False 1715.275000 5958 94.767000 19 4558 4 chrUn.!!$F6 4539
9 TraesCS4B01G005100 chrUn 48044510 48045926 1416 False 1524.000000 1524 86.246000 636 2045 1 chrUn.!!$F2 1409
10 TraesCS4B01G005100 chrUn 48074781 48076197 1416 False 1519.000000 1519 86.175000 636 2045 1 chrUn.!!$F3 1409
11 TraesCS4B01G005100 chr4D 1821788 1825474 3686 False 4996.000000 4996 91.078000 822 4537 1 chr4D.!!$F1 3715
12 TraesCS4B01G005100 chr4D 1874697 1876894 2197 False 2588.000000 2588 87.935000 2331 4537 1 chr4D.!!$F2 2206
13 TraesCS4B01G005100 chr4A 602609796 602611975 2179 False 2348.000000 2348 86.134000 2335 4539 1 chr4A.!!$F1 2204
14 TraesCS4B01G005100 chr4A 602869014 602875426 6412 False 1030.000000 2645 87.166333 148 4623 3 chr4A.!!$F3 4475
15 TraesCS4B01G005100 chr4A 602722320 602727084 4764 False 941.666667 1376 87.722667 2791 4551 3 chr4A.!!$F2 1760
16 TraesCS4B01G005100 chr1B 628616409 628618555 2146 True 848.000000 848 74.188000 2335 4489 1 chr1B.!!$R1 2154
17 TraesCS4B01G005100 chr1A 550634443 550636076 1633 True 809.000000 809 75.918000 2335 3977 1 chr1A.!!$R1 1642
18 TraesCS4B01G005100 chr1D 458143560 458145197 1637 True 784.000000 784 75.616000 2335 3981 1 chr1D.!!$R3 1646

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
142 143 0.178885 TTACACCCTACCACCAGCCT 60.179 55.000 0.00 0.0 0.0 4.58 F
225 280 0.391597 TAACCTACCGCCAGCTATGC 59.608 55.000 0.00 0.0 0.0 3.14 F
1557 3477 0.690762 TGGAGGTGCTTACAAGGGAC 59.309 55.000 0.00 0.0 0.0 4.46 F
2087 4018 0.032403 CGTCGTTTGGGACCACACTA 59.968 55.000 6.13 0.0 33.3 2.74 F
3582 6410 1.134159 AGGAGCAGATGATTGAGGCAC 60.134 52.381 0.00 0.0 0.0 5.01 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1557 3477 0.038526 AACTCTTGTCACCTACCGCG 60.039 55.000 0.00 0.0 0.00 6.46 R
1576 3496 1.374125 CGACCACAATGAGGCGACA 60.374 57.895 7.48 0.0 0.00 4.35 R
2993 5812 0.519077 GCTGACTTTTGAGGCTTCCG 59.481 55.000 0.00 0.0 0.00 4.30 R
4002 6830 0.033011 AGTCCTGGAGGCATACGACT 60.033 55.000 0.00 0.0 34.44 4.18 R
5395 9340 0.032267 GACTCTAGGCACGCCCATAC 59.968 60.000 3.95 0.0 36.58 2.39 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
49 50 8.047310 GGGAGAAGAATTACTTATTTCTCACCA 58.953 37.037 15.43 0.00 39.13 4.17
58 59 9.872684 ATTACTTATTTCTCACCATGATCCATT 57.127 29.630 0.00 0.00 0.00 3.16
69 70 0.529773 TGATCCATTGACCGCGCTAC 60.530 55.000 5.56 0.00 0.00 3.58
70 71 0.529773 GATCCATTGACCGCGCTACA 60.530 55.000 5.56 0.00 0.00 2.74
71 72 0.530650 ATCCATTGACCGCGCTACAG 60.531 55.000 5.56 0.00 0.00 2.74
72 73 2.703409 CATTGACCGCGCTACAGC 59.297 61.111 5.56 0.00 37.78 4.40
74 75 2.100631 ATTGACCGCGCTACAGCAC 61.101 57.895 5.56 0.00 42.21 4.40
75 76 2.507110 ATTGACCGCGCTACAGCACT 62.507 55.000 5.56 0.00 42.21 4.40
77 78 1.586564 GACCGCGCTACAGCACTAG 60.587 63.158 5.56 0.00 42.21 2.57
78 79 2.278857 CCGCGCTACAGCACTAGG 60.279 66.667 5.56 0.00 42.21 3.02
79 80 2.956964 CGCGCTACAGCACTAGGC 60.957 66.667 5.56 0.00 42.21 3.93
89 90 2.124983 CACTAGGCGCAGGTGCAT 60.125 61.111 10.83 1.84 42.21 3.96
90 91 2.124983 ACTAGGCGCAGGTGCATG 60.125 61.111 10.83 0.00 42.21 4.06
91 92 2.187685 CTAGGCGCAGGTGCATGA 59.812 61.111 10.83 0.00 42.21 3.07
93 94 3.680620 TAGGCGCAGGTGCATGACC 62.681 63.158 10.83 1.11 46.58 4.02
100 101 4.049393 GGTGCATGACCCTATCGC 57.951 61.111 0.00 0.00 39.10 4.58
102 103 1.146041 GTGCATGACCCTATCGCCA 59.854 57.895 0.00 0.00 0.00 5.69
104 105 0.254462 TGCATGACCCTATCGCCAAA 59.746 50.000 0.00 0.00 0.00 3.28
106 107 2.016604 GCATGACCCTATCGCCAAACA 61.017 52.381 0.00 0.00 0.00 2.83
107 108 2.364632 CATGACCCTATCGCCAAACAA 58.635 47.619 0.00 0.00 0.00 2.83
108 109 2.799126 TGACCCTATCGCCAAACAAT 57.201 45.000 0.00 0.00 0.00 2.71
109 110 2.364632 TGACCCTATCGCCAAACAATG 58.635 47.619 0.00 0.00 0.00 2.82
116 117 4.356442 GCCAAACAATGCGGCGGT 62.356 61.111 9.78 0.00 35.79 5.68
117 118 2.983930 GCCAAACAATGCGGCGGTA 61.984 57.895 9.78 0.00 35.79 4.02
120 121 1.674322 AAACAATGCGGCGGTAGCT 60.674 52.632 9.78 0.00 44.37 3.32
122 123 0.391927 AACAATGCGGCGGTAGCTTA 60.392 50.000 9.78 0.00 44.37 3.09
123 124 0.179056 ACAATGCGGCGGTAGCTTAT 60.179 50.000 9.78 0.00 44.37 1.73
124 125 0.944386 CAATGCGGCGGTAGCTTATT 59.056 50.000 9.78 0.00 44.37 1.40
127 128 0.460722 TGCGGCGGTAGCTTATTACA 59.539 50.000 9.78 0.00 44.37 2.41
131 132 1.415289 GGCGGTAGCTTATTACACCCT 59.585 52.381 0.00 0.00 44.37 4.34
134 135 3.553715 GCGGTAGCTTATTACACCCTACC 60.554 52.174 0.00 0.00 42.80 3.18
139 140 3.454812 AGCTTATTACACCCTACCACCAG 59.545 47.826 0.00 0.00 0.00 4.00
140 141 3.805207 CTTATTACACCCTACCACCAGC 58.195 50.000 0.00 0.00 0.00 4.85
142 143 0.178885 TTACACCCTACCACCAGCCT 60.179 55.000 0.00 0.00 0.00 4.58
143 144 0.616679 TACACCCTACCACCAGCCTC 60.617 60.000 0.00 0.00 0.00 4.70
188 189 6.019779 ACAAGTCAGCAACAACAAAGTTAA 57.980 33.333 0.00 0.00 0.00 2.01
193 194 6.974622 AGTCAGCAACAACAAAGTTAAATGAG 59.025 34.615 0.00 0.00 0.00 2.90
195 196 5.463061 CAGCAACAACAAAGTTAAATGAGGG 59.537 40.000 0.00 0.00 0.00 4.30
196 197 4.211164 GCAACAACAAAGTTAAATGAGGGC 59.789 41.667 0.00 0.00 0.00 5.19
219 274 1.812507 GCCGTTAACCTACCGCCAG 60.813 63.158 0.00 0.00 0.00 4.85
222 277 0.457035 CGTTAACCTACCGCCAGCTA 59.543 55.000 0.00 0.00 0.00 3.32
223 278 1.068127 CGTTAACCTACCGCCAGCTAT 59.932 52.381 0.00 0.00 0.00 2.97
224 279 2.480845 GTTAACCTACCGCCAGCTATG 58.519 52.381 0.00 0.00 0.00 2.23
225 280 0.391597 TAACCTACCGCCAGCTATGC 59.608 55.000 0.00 0.00 0.00 3.14
226 281 1.622607 AACCTACCGCCAGCTATGCA 61.623 55.000 8.02 0.00 0.00 3.96
227 282 1.301244 CCTACCGCCAGCTATGCAG 60.301 63.158 8.02 0.00 0.00 4.41
310 365 5.710567 CCGGAGTCATACTAGGATGAACATA 59.289 44.000 19.53 0.00 37.58 2.29
313 368 7.810282 CGGAGTCATACTAGGATGAACATAAAG 59.190 40.741 19.53 4.27 37.58 1.85
350 705 3.476356 AAATTTGGCCGGGTGGGGT 62.476 57.895 2.18 0.00 35.78 4.95
351 706 2.095438 AAATTTGGCCGGGTGGGGTA 62.095 55.000 2.18 0.00 35.78 3.69
433 788 1.875009 TCAAGCAGAGCTCACAGTTG 58.125 50.000 17.77 13.22 38.25 3.16
601 956 2.176045 TCCCGTCTGCTAATTCACTCA 58.824 47.619 0.00 0.00 0.00 3.41
604 959 2.610433 CGTCTGCTAATTCACTCAGCA 58.390 47.619 0.22 0.22 42.77 4.41
620 2356 4.604050 ACTCAGCAGAGGGGTATCTATCTA 59.396 45.833 11.18 0.00 46.44 1.98
621 2357 5.186256 TCAGCAGAGGGGTATCTATCTAG 57.814 47.826 0.00 0.00 0.00 2.43
622 2358 3.699038 CAGCAGAGGGGTATCTATCTAGC 59.301 52.174 0.00 0.00 0.00 3.42
626 2362 5.247337 GCAGAGGGGTATCTATCTAGCTTTT 59.753 44.000 0.00 0.00 0.00 2.27
627 2363 6.696411 CAGAGGGGTATCTATCTAGCTTTTG 58.304 44.000 0.00 0.00 0.00 2.44
651 2387 1.472878 TCCAACAAGATCCGTCTCTCG 59.527 52.381 0.00 0.00 32.15 4.04
812 2721 6.455913 CGGTTTTATTTCGAGCCGAATTTCTA 60.456 38.462 10.19 0.00 45.28 2.10
839 2757 4.099266 ACTGTCTTTGCAAGCCACATTTTA 59.901 37.500 0.00 0.00 0.00 1.52
1402 3322 2.749441 GCAAGAGGGGCAGCAGTC 60.749 66.667 0.00 0.00 0.00 3.51
1557 3477 0.690762 TGGAGGTGCTTACAAGGGAC 59.309 55.000 0.00 0.00 0.00 4.46
1576 3496 0.038526 CGCGGTAGGTGACAAGAGTT 60.039 55.000 0.00 0.00 0.00 3.01
1675 3595 2.154462 AGACCATCGAAGGCAAGTTTG 58.846 47.619 6.60 0.00 0.00 2.93
2056 3977 1.029681 GGTCGGCACTTCCAAAACTT 58.970 50.000 0.00 0.00 34.01 2.66
2087 4018 0.032403 CGTCGTTTGGGACCACACTA 59.968 55.000 6.13 0.00 33.30 2.74
2195 4318 4.510038 AACATGAGTTCATCAAGTTGGC 57.490 40.909 0.00 0.00 45.54 4.52
2352 5168 5.419542 TCTATTTGCAGGTACTCACATCAC 58.580 41.667 0.00 0.00 34.60 3.06
2377 5193 7.175641 ACAGGAAAATGAACCAGAAGTTGATAG 59.824 37.037 0.00 0.00 39.40 2.08
2390 5206 8.250332 CCAGAAGTTGATAGGCTAGAAGATATC 58.750 40.741 0.00 0.00 0.00 1.63
2774 5593 9.411189 CTTATAGAGGTAGATACAGATTACCCC 57.589 40.741 0.00 0.00 38.04 4.95
2998 5817 7.384387 GCTTAGGTCACTAATATTAACCGGAAG 59.616 40.741 9.46 17.72 38.44 3.46
3219 6041 6.701400 CCTTGAAGGTTGTGAAAGTTTTATGG 59.299 38.462 2.25 0.00 0.00 2.74
3446 6268 7.290248 AGCCTAGAAAATGTATCTAGTGCCTTA 59.710 37.037 14.68 0.00 43.13 2.69
3572 6400 2.627699 GTCTAAGGAGGAGGAGCAGATG 59.372 54.545 0.00 0.00 0.00 2.90
3581 6409 1.140452 GAGGAGCAGATGATTGAGGCA 59.860 52.381 0.00 0.00 0.00 4.75
3582 6410 1.134159 AGGAGCAGATGATTGAGGCAC 60.134 52.381 0.00 0.00 0.00 5.01
3865 6693 2.001812 CACCGTCCTTCATCTCAGTG 57.998 55.000 0.00 0.00 0.00 3.66
3866 6694 1.273606 CACCGTCCTTCATCTCAGTGT 59.726 52.381 0.00 0.00 0.00 3.55
3867 6695 2.492088 CACCGTCCTTCATCTCAGTGTA 59.508 50.000 0.00 0.00 0.00 2.90
3868 6696 3.131223 CACCGTCCTTCATCTCAGTGTAT 59.869 47.826 0.00 0.00 0.00 2.29
3869 6697 3.769844 ACCGTCCTTCATCTCAGTGTATT 59.230 43.478 0.00 0.00 0.00 1.89
3870 6698 4.115516 CCGTCCTTCATCTCAGTGTATTG 58.884 47.826 0.00 0.00 0.00 1.90
3871 6699 4.115516 CGTCCTTCATCTCAGTGTATTGG 58.884 47.826 0.00 0.00 0.00 3.16
3988 6816 6.464465 CCCTTATTGGAGGAACTTCGTATCAT 60.464 42.308 0.00 0.00 41.55 2.45
4224 7920 1.911357 TGAAGGACATGGATGCACTCT 59.089 47.619 0.00 0.00 0.00 3.24
4293 7989 2.597455 ACCTGCAAACTGTAAAGCCAT 58.403 42.857 0.00 0.00 0.00 4.40
4305 8001 3.825585 TGTAAAGCCATGTCATTTGCTGA 59.174 39.130 7.25 0.00 33.59 4.26
4358 8054 1.759445 GCTGAGGGTGAATCTAGCTCA 59.241 52.381 0.00 0.00 0.00 4.26
4409 8105 2.939103 AGTCGAGGCTTATGCAAATGAC 59.061 45.455 2.72 5.01 41.91 3.06
4412 8108 2.017049 GAGGCTTATGCAAATGACGGT 58.983 47.619 2.72 0.00 41.91 4.83
4564 8467 3.940209 ATTTGTTGGTGCCACTGTATG 57.060 42.857 0.00 0.00 0.00 2.39
4743 8661 3.319405 GTCTATCATGACCAGATCCGTGT 59.681 47.826 11.06 0.00 0.00 4.49
4784 8729 0.962855 GGCTGCCTCCACTTTCTTCC 60.963 60.000 12.43 0.00 0.00 3.46
4785 8730 0.037447 GCTGCCTCCACTTTCTTCCT 59.963 55.000 0.00 0.00 0.00 3.36
4786 8731 1.279271 GCTGCCTCCACTTTCTTCCTA 59.721 52.381 0.00 0.00 0.00 2.94
4787 8732 2.937433 GCTGCCTCCACTTTCTTCCTAC 60.937 54.545 0.00 0.00 0.00 3.18
4788 8733 1.275291 TGCCTCCACTTTCTTCCTACG 59.725 52.381 0.00 0.00 0.00 3.51
4789 8734 1.405661 GCCTCCACTTTCTTCCTACGG 60.406 57.143 0.00 0.00 0.00 4.02
4790 8735 1.405661 CCTCCACTTTCTTCCTACGGC 60.406 57.143 0.00 0.00 0.00 5.68
4791 8736 1.550976 CTCCACTTTCTTCCTACGGCT 59.449 52.381 0.00 0.00 0.00 5.52
4792 8737 2.758979 CTCCACTTTCTTCCTACGGCTA 59.241 50.000 0.00 0.00 0.00 3.93
4793 8738 2.758979 TCCACTTTCTTCCTACGGCTAG 59.241 50.000 0.00 0.00 0.00 3.42
4794 8739 2.496470 CCACTTTCTTCCTACGGCTAGT 59.504 50.000 0.00 0.00 0.00 2.57
4795 8740 3.512680 CACTTTCTTCCTACGGCTAGTG 58.487 50.000 0.00 0.00 0.00 2.74
4796 8741 3.192844 CACTTTCTTCCTACGGCTAGTGA 59.807 47.826 0.00 0.00 35.06 3.41
4797 8742 3.444388 ACTTTCTTCCTACGGCTAGTGAG 59.556 47.826 0.00 0.00 0.00 3.51
4798 8743 2.803030 TCTTCCTACGGCTAGTGAGT 57.197 50.000 0.00 0.00 0.00 3.41
4799 8744 3.083122 TCTTCCTACGGCTAGTGAGTT 57.917 47.619 0.00 0.00 0.00 3.01
4800 8745 2.753452 TCTTCCTACGGCTAGTGAGTTG 59.247 50.000 0.00 0.00 0.00 3.16
4801 8746 1.471119 TCCTACGGCTAGTGAGTTGG 58.529 55.000 7.92 7.92 33.24 3.77
4802 8747 0.179108 CCTACGGCTAGTGAGTTGGC 60.179 60.000 0.00 0.00 0.00 4.52
4803 8748 0.179108 CTACGGCTAGTGAGTTGGCC 60.179 60.000 0.00 0.00 41.02 5.36
4804 8749 0.901114 TACGGCTAGTGAGTTGGCCA 60.901 55.000 0.00 0.00 44.27 5.36
4805 8750 1.221840 CGGCTAGTGAGTTGGCCAT 59.778 57.895 6.09 0.00 44.27 4.40
4806 8751 1.091771 CGGCTAGTGAGTTGGCCATG 61.092 60.000 6.09 0.00 44.27 3.66
4807 8752 1.379642 GGCTAGTGAGTTGGCCATGC 61.380 60.000 6.09 2.32 43.59 4.06
4808 8753 0.677731 GCTAGTGAGTTGGCCATGCA 60.678 55.000 6.09 1.76 0.00 3.96
4809 8754 1.825090 CTAGTGAGTTGGCCATGCAA 58.175 50.000 6.09 0.00 0.00 4.08
4810 8755 2.161855 CTAGTGAGTTGGCCATGCAAA 58.838 47.619 6.09 0.00 0.00 3.68
4811 8756 0.675633 AGTGAGTTGGCCATGCAAAC 59.324 50.000 6.09 0.00 42.30 2.93
4948 8893 1.474077 CCAGGAAAATGGTAGTGCTGC 59.526 52.381 0.00 0.00 35.47 5.25
4954 8899 4.321899 GGAAAATGGTAGTGCTGCAATTCA 60.322 41.667 8.25 8.04 0.00 2.57
4962 8907 3.418995 AGTGCTGCAATTCAGAGATGTT 58.581 40.909 2.77 0.00 45.72 2.71
4968 8913 5.122869 GCTGCAATTCAGAGATGTTAGTCAA 59.877 40.000 8.52 0.00 45.72 3.18
4973 8918 7.748241 GCAATTCAGAGATGTTAGTCAAGAAAC 59.252 37.037 0.00 0.00 0.00 2.78
4982 8927 9.823647 AGATGTTAGTCAAGAAACTGGTATATG 57.176 33.333 0.00 0.00 0.00 1.78
4992 8937 8.335356 CAAGAAACTGGTATATGTTGTAATCCG 58.665 37.037 0.00 0.00 0.00 4.18
5002 8947 4.545208 TGTTGTAATCCGGAGATGTGAA 57.455 40.909 11.34 0.00 31.29 3.18
5015 8960 6.283694 CGGAGATGTGAATCAGGAAAATAGA 58.716 40.000 0.00 0.00 0.00 1.98
5194 9139 1.276421 TGCAAGTAGCCTCAACTCCTC 59.724 52.381 0.00 0.00 44.83 3.71
5211 9156 0.232303 CTCGTCGTTGTCAGTTTGGC 59.768 55.000 0.00 0.00 0.00 4.52
5228 9173 2.712984 GCAAGGAAGCCTATGGAGC 58.287 57.895 0.00 0.00 31.13 4.70
5229 9174 1.162800 GCAAGGAAGCCTATGGAGCG 61.163 60.000 0.00 0.00 31.13 5.03
5230 9175 1.147153 AAGGAAGCCTATGGAGCGC 59.853 57.895 0.00 0.00 31.13 5.92
5231 9176 2.281139 GGAAGCCTATGGAGCGCC 60.281 66.667 2.29 0.00 34.64 6.53
5265 9210 3.123674 CGAAGGAGACGGTTCCAAG 57.876 57.895 9.73 0.00 39.84 3.61
5266 9211 0.389948 CGAAGGAGACGGTTCCAAGG 60.390 60.000 9.73 0.00 39.84 3.61
5267 9212 0.673956 GAAGGAGACGGTTCCAAGGC 60.674 60.000 9.73 0.00 39.84 4.35
5268 9213 2.046217 GGAGACGGTTCCAAGGCC 60.046 66.667 0.00 0.00 37.20 5.19
5273 9218 3.047877 CGGTTCCAAGGCCGTGAC 61.048 66.667 21.23 11.02 42.73 3.67
5274 9219 2.671963 GGTTCCAAGGCCGTGACC 60.672 66.667 21.23 16.42 0.00 4.02
5275 9220 2.112297 GTTCCAAGGCCGTGACCA 59.888 61.111 21.23 0.27 0.00 4.02
5276 9221 1.527380 GTTCCAAGGCCGTGACCAA 60.527 57.895 21.23 6.90 0.00 3.67
5277 9222 1.228124 TTCCAAGGCCGTGACCAAG 60.228 57.895 21.23 2.72 0.00 3.61
5278 9223 3.365265 CCAAGGCCGTGACCAAGC 61.365 66.667 21.23 0.00 0.00 4.01
5282 9227 4.966787 GGCCGTGACCAAGCCCAA 62.967 66.667 0.00 0.00 41.00 4.12
5283 9228 3.670377 GCCGTGACCAAGCCCAAC 61.670 66.667 0.00 0.00 0.00 3.77
5284 9229 2.983592 CCGTGACCAAGCCCAACC 60.984 66.667 0.00 0.00 0.00 3.77
5285 9230 2.983592 CGTGACCAAGCCCAACCC 60.984 66.667 0.00 0.00 0.00 4.11
5286 9231 2.983592 GTGACCAAGCCCAACCCG 60.984 66.667 0.00 0.00 0.00 5.28
5287 9232 4.278513 TGACCAAGCCCAACCCGG 62.279 66.667 0.00 0.00 0.00 5.73
5288 9233 3.961414 GACCAAGCCCAACCCGGA 61.961 66.667 0.73 0.00 36.56 5.14
5289 9234 3.920093 GACCAAGCCCAACCCGGAG 62.920 68.421 0.73 0.00 36.56 4.63
5290 9235 3.966543 CCAAGCCCAACCCGGAGT 61.967 66.667 0.73 0.00 36.56 3.85
5291 9236 2.598787 CCAAGCCCAACCCGGAGTA 61.599 63.158 0.73 0.00 36.56 2.59
5292 9237 1.376812 CAAGCCCAACCCGGAGTAC 60.377 63.158 0.73 0.00 36.56 2.73
5293 9238 2.951101 AAGCCCAACCCGGAGTACG 61.951 63.158 0.73 0.00 43.80 3.67
5295 9240 4.462280 CCCAACCCGGAGTACGCC 62.462 72.222 0.73 5.41 42.52 5.68
5296 9241 3.387947 CCAACCCGGAGTACGCCT 61.388 66.667 14.12 0.00 42.52 5.52
5297 9242 2.660802 CAACCCGGAGTACGCCTT 59.339 61.111 14.12 0.00 42.52 4.35
5298 9243 1.740296 CAACCCGGAGTACGCCTTG 60.740 63.158 14.12 7.79 42.52 3.61
5299 9244 2.212110 AACCCGGAGTACGCCTTGT 61.212 57.895 14.12 7.51 42.52 3.16
5300 9245 2.125673 CCCGGAGTACGCCTTGTG 60.126 66.667 14.12 0.00 42.52 3.33
5301 9246 2.125673 CCGGAGTACGCCTTGTGG 60.126 66.667 14.12 3.53 42.52 4.17
5302 9247 2.654877 CGGAGTACGCCTTGTGGT 59.345 61.111 14.12 0.00 34.82 4.16
5303 9248 1.005394 CGGAGTACGCCTTGTGGTT 60.005 57.895 14.12 0.00 34.82 3.67
5304 9249 1.012486 CGGAGTACGCCTTGTGGTTC 61.012 60.000 14.12 0.00 34.82 3.62
5305 9250 0.320697 GGAGTACGCCTTGTGGTTCT 59.679 55.000 8.60 0.00 35.27 3.01
5306 9251 1.547372 GGAGTACGCCTTGTGGTTCTA 59.453 52.381 8.60 0.00 35.27 2.10
5307 9252 2.603953 GAGTACGCCTTGTGGTTCTAC 58.396 52.381 0.00 0.00 35.27 2.59
5308 9253 1.965643 AGTACGCCTTGTGGTTCTACA 59.034 47.619 0.00 0.00 35.27 2.74
5309 9254 2.064014 GTACGCCTTGTGGTTCTACAC 58.936 52.381 0.00 0.00 41.68 2.90
5317 9262 1.070134 TGTGGTTCTACACAGGTCAGC 59.930 52.381 0.00 0.00 45.70 4.26
5318 9263 0.317160 TGGTTCTACACAGGTCAGCG 59.683 55.000 0.00 0.00 0.00 5.18
5319 9264 0.317479 GGTTCTACACAGGTCAGCGT 59.683 55.000 0.00 0.00 0.00 5.07
5320 9265 1.270147 GGTTCTACACAGGTCAGCGTT 60.270 52.381 0.00 0.00 0.00 4.84
5321 9266 2.480845 GTTCTACACAGGTCAGCGTTT 58.519 47.619 0.00 0.00 0.00 3.60
5322 9267 2.870411 GTTCTACACAGGTCAGCGTTTT 59.130 45.455 0.00 0.00 0.00 2.43
5323 9268 2.750948 TCTACACAGGTCAGCGTTTTC 58.249 47.619 0.00 0.00 0.00 2.29
5324 9269 2.364324 TCTACACAGGTCAGCGTTTTCT 59.636 45.455 0.00 0.00 0.00 2.52
5325 9270 2.038387 ACACAGGTCAGCGTTTTCTT 57.962 45.000 0.00 0.00 0.00 2.52
5326 9271 3.188159 ACACAGGTCAGCGTTTTCTTA 57.812 42.857 0.00 0.00 0.00 2.10
5327 9272 3.131396 ACACAGGTCAGCGTTTTCTTAG 58.869 45.455 0.00 0.00 0.00 2.18
5328 9273 2.096218 CACAGGTCAGCGTTTTCTTAGC 60.096 50.000 0.00 0.00 0.00 3.09
5329 9274 2.143122 CAGGTCAGCGTTTTCTTAGCA 58.857 47.619 0.00 0.00 0.00 3.49
5330 9275 2.744202 CAGGTCAGCGTTTTCTTAGCAT 59.256 45.455 0.00 0.00 0.00 3.79
5331 9276 3.003480 AGGTCAGCGTTTTCTTAGCATC 58.997 45.455 0.00 0.00 0.00 3.91
5332 9277 2.096013 GGTCAGCGTTTTCTTAGCATCC 59.904 50.000 0.00 0.00 0.00 3.51
5333 9278 3.003480 GTCAGCGTTTTCTTAGCATCCT 58.997 45.455 0.00 0.00 0.00 3.24
5334 9279 3.062774 GTCAGCGTTTTCTTAGCATCCTC 59.937 47.826 0.00 0.00 0.00 3.71
5335 9280 2.029728 CAGCGTTTTCTTAGCATCCTCG 59.970 50.000 0.00 0.00 0.00 4.63
5336 9281 2.000447 GCGTTTTCTTAGCATCCTCGT 59.000 47.619 0.00 0.00 0.00 4.18
5337 9282 2.029365 GCGTTTTCTTAGCATCCTCGTC 59.971 50.000 0.00 0.00 0.00 4.20
5338 9283 2.279136 CGTTTTCTTAGCATCCTCGTCG 59.721 50.000 0.00 0.00 0.00 5.12
5339 9284 2.579207 TTTCTTAGCATCCTCGTCGG 57.421 50.000 0.00 0.00 0.00 4.79
5340 9285 0.102481 TTCTTAGCATCCTCGTCGGC 59.898 55.000 0.00 0.00 0.00 5.54
5341 9286 0.752009 TCTTAGCATCCTCGTCGGCT 60.752 55.000 0.00 0.00 40.26 5.52
5342 9287 0.318275 CTTAGCATCCTCGTCGGCTC 60.318 60.000 0.00 0.00 37.79 4.70
5343 9288 1.735376 TTAGCATCCTCGTCGGCTCC 61.735 60.000 0.00 0.00 37.79 4.70
5344 9289 2.904178 TAGCATCCTCGTCGGCTCCA 62.904 60.000 0.00 0.00 37.79 3.86
5345 9290 3.133014 CATCCTCGTCGGCTCCAT 58.867 61.111 0.00 0.00 0.00 3.41
5346 9291 1.300465 CATCCTCGTCGGCTCCATG 60.300 63.158 0.00 0.00 0.00 3.66
5347 9292 1.455773 ATCCTCGTCGGCTCCATGA 60.456 57.895 0.00 0.00 0.00 3.07
5348 9293 1.739338 ATCCTCGTCGGCTCCATGAC 61.739 60.000 0.00 0.00 0.00 3.06
5349 9294 2.710902 CCTCGTCGGCTCCATGACA 61.711 63.158 0.00 0.00 34.78 3.58
5350 9295 1.226802 CTCGTCGGCTCCATGACAG 60.227 63.158 0.00 0.00 34.78 3.51
5351 9296 1.657751 CTCGTCGGCTCCATGACAGA 61.658 60.000 0.00 0.00 34.78 3.41
5352 9297 1.226802 CGTCGGCTCCATGACAGAG 60.227 63.158 0.00 0.00 34.78 3.35
5353 9298 1.142748 GTCGGCTCCATGACAGAGG 59.857 63.158 0.00 0.00 35.20 3.69
5354 9299 1.000359 TCGGCTCCATGACAGAGGA 60.000 57.895 0.00 0.05 0.00 3.71
5368 9313 3.882825 AGGAGATCCTCGGCCATG 58.117 61.111 2.24 0.00 44.77 3.66
5369 9314 1.074926 AGGAGATCCTCGGCCATGT 60.075 57.895 2.24 0.00 44.77 3.21
5370 9315 1.118356 AGGAGATCCTCGGCCATGTC 61.118 60.000 2.24 0.00 44.77 3.06
5371 9316 1.402896 GGAGATCCTCGGCCATGTCA 61.403 60.000 2.24 0.00 0.00 3.58
5372 9317 0.683973 GAGATCCTCGGCCATGTCAT 59.316 55.000 2.24 0.00 0.00 3.06
5373 9318 0.683973 AGATCCTCGGCCATGTCATC 59.316 55.000 2.24 0.00 0.00 2.92
5374 9319 0.668706 GATCCTCGGCCATGTCATCG 60.669 60.000 2.24 0.00 0.00 3.84
5375 9320 2.104572 ATCCTCGGCCATGTCATCGG 62.105 60.000 2.24 0.00 0.00 4.18
5381 9326 3.576356 CCATGTCATCGGCCGCAC 61.576 66.667 23.51 17.20 0.00 5.34
5382 9327 3.576356 CATGTCATCGGCCGCACC 61.576 66.667 23.51 8.69 0.00 5.01
5383 9328 4.094646 ATGTCATCGGCCGCACCA 62.095 61.111 23.51 14.57 39.03 4.17
5396 9341 3.991051 CACCACCGCGTCCTCTGT 61.991 66.667 4.92 0.00 0.00 3.41
5397 9342 2.282674 ACCACCGCGTCCTCTGTA 60.283 61.111 4.92 0.00 0.00 2.74
5398 9343 1.681327 ACCACCGCGTCCTCTGTAT 60.681 57.895 4.92 0.00 0.00 2.29
5399 9344 1.226974 CCACCGCGTCCTCTGTATG 60.227 63.158 4.92 0.00 0.00 2.39
5400 9345 1.226974 CACCGCGTCCTCTGTATGG 60.227 63.158 4.92 0.00 0.00 2.74
5401 9346 2.417516 CCGCGTCCTCTGTATGGG 59.582 66.667 4.92 0.00 0.00 4.00
5402 9347 2.279517 CGCGTCCTCTGTATGGGC 60.280 66.667 0.00 0.00 0.00 5.36
5404 9349 3.207354 CGTCCTCTGTATGGGCGT 58.793 61.111 0.00 0.00 46.30 5.68
5405 9350 1.226974 CGTCCTCTGTATGGGCGTG 60.227 63.158 0.00 0.00 46.30 5.34
5406 9351 1.521681 GTCCTCTGTATGGGCGTGC 60.522 63.158 0.00 0.00 0.00 5.34
5407 9352 2.203070 CCTCTGTATGGGCGTGCC 60.203 66.667 1.16 1.16 0.00 5.01
5408 9353 2.735772 CCTCTGTATGGGCGTGCCT 61.736 63.158 11.25 0.00 36.10 4.75
5409 9354 1.399744 CCTCTGTATGGGCGTGCCTA 61.400 60.000 11.25 4.86 36.10 3.93
5410 9355 0.032678 CTCTGTATGGGCGTGCCTAG 59.967 60.000 11.25 2.64 36.10 3.02
5411 9356 0.396556 TCTGTATGGGCGTGCCTAGA 60.397 55.000 11.25 0.00 36.10 2.43
5412 9357 0.032678 CTGTATGGGCGTGCCTAGAG 59.967 60.000 11.25 0.55 36.10 2.43
5413 9358 0.686441 TGTATGGGCGTGCCTAGAGT 60.686 55.000 11.25 0.00 36.10 3.24
5414 9359 0.032267 GTATGGGCGTGCCTAGAGTC 59.968 60.000 11.25 0.00 36.10 3.36
5415 9360 1.113517 TATGGGCGTGCCTAGAGTCC 61.114 60.000 11.25 0.00 36.10 3.85
5416 9361 3.075005 GGGCGTGCCTAGAGTCCA 61.075 66.667 11.25 0.00 36.10 4.02
5417 9362 2.435693 GGGCGTGCCTAGAGTCCAT 61.436 63.158 11.25 0.00 36.10 3.41
5418 9363 1.227380 GGCGTGCCTAGAGTCCATG 60.227 63.158 2.98 0.00 0.00 3.66
5419 9364 1.517832 GCGTGCCTAGAGTCCATGT 59.482 57.895 0.00 0.00 0.00 3.21
5420 9365 0.108138 GCGTGCCTAGAGTCCATGTT 60.108 55.000 0.00 0.00 0.00 2.71
5421 9366 1.927895 CGTGCCTAGAGTCCATGTTC 58.072 55.000 0.00 0.00 0.00 3.18
5422 9367 1.478510 CGTGCCTAGAGTCCATGTTCT 59.521 52.381 0.00 0.00 0.00 3.01
5423 9368 2.480416 CGTGCCTAGAGTCCATGTTCTC 60.480 54.545 0.00 6.35 0.00 2.87
5424 9369 1.751351 TGCCTAGAGTCCATGTTCTCG 59.249 52.381 0.00 0.00 36.03 4.04
5425 9370 1.067821 GCCTAGAGTCCATGTTCTCGG 59.932 57.143 0.00 6.91 36.03 4.63
5426 9371 1.067821 CCTAGAGTCCATGTTCTCGGC 59.932 57.143 0.00 0.00 36.03 5.54
5427 9372 0.738975 TAGAGTCCATGTTCTCGGCG 59.261 55.000 0.00 0.00 36.03 6.46
5428 9373 2.125512 AGTCCATGTTCTCGGCGC 60.126 61.111 0.00 0.00 0.00 6.53
5429 9374 2.434185 GTCCATGTTCTCGGCGCA 60.434 61.111 10.83 0.00 0.00 6.09
5430 9375 2.125552 TCCATGTTCTCGGCGCAG 60.126 61.111 10.83 5.07 0.00 5.18
5431 9376 2.125552 CCATGTTCTCGGCGCAGA 60.126 61.111 10.83 10.65 0.00 4.26
5432 9377 1.741401 CCATGTTCTCGGCGCAGAA 60.741 57.895 12.27 8.95 0.00 3.02
5433 9378 1.091771 CCATGTTCTCGGCGCAGAAT 61.092 55.000 19.38 0.00 34.86 2.40
5434 9379 1.570813 CATGTTCTCGGCGCAGAATA 58.429 50.000 19.38 17.68 34.86 1.75
5435 9380 1.524355 CATGTTCTCGGCGCAGAATAG 59.476 52.381 19.38 0.00 34.86 1.73
5436 9381 0.179111 TGTTCTCGGCGCAGAATAGG 60.179 55.000 19.38 0.00 34.86 2.57
5437 9382 0.876342 GTTCTCGGCGCAGAATAGGG 60.876 60.000 19.38 0.00 34.86 3.53
5438 9383 2.644555 TTCTCGGCGCAGAATAGGGC 62.645 60.000 12.27 0.00 45.64 5.19
5443 9388 4.626081 CGCAGAATAGGGCCGGGG 62.626 72.222 2.18 0.00 0.00 5.73
5444 9389 3.489513 GCAGAATAGGGCCGGGGT 61.490 66.667 2.18 0.00 0.00 4.95
5445 9390 2.510906 CAGAATAGGGCCGGGGTG 59.489 66.667 2.18 0.00 0.00 4.61
5446 9391 3.489513 AGAATAGGGCCGGGGTGC 61.490 66.667 2.18 0.00 0.00 5.01
5447 9392 4.929707 GAATAGGGCCGGGGTGCG 62.930 72.222 2.18 0.00 0.00 5.34
5464 9409 2.482374 GCCAGATGCAGCGTCAAC 59.518 61.111 17.16 1.81 40.77 3.18
5465 9410 2.037136 GCCAGATGCAGCGTCAACT 61.037 57.895 17.16 0.00 40.77 3.16
5466 9411 1.975363 GCCAGATGCAGCGTCAACTC 61.975 60.000 17.16 0.00 40.77 3.01
5467 9412 0.390866 CCAGATGCAGCGTCAACTCT 60.391 55.000 17.16 0.00 0.00 3.24
5468 9413 0.997932 CAGATGCAGCGTCAACTCTC 59.002 55.000 17.16 0.00 0.00 3.20
5469 9414 0.457509 AGATGCAGCGTCAACTCTCG 60.458 55.000 17.16 0.00 0.00 4.04
5470 9415 0.456824 GATGCAGCGTCAACTCTCGA 60.457 55.000 9.95 0.00 0.00 4.04
5471 9416 0.734253 ATGCAGCGTCAACTCTCGAC 60.734 55.000 0.00 0.00 0.00 4.20
5477 9422 3.474007 GTCAACTCTCGACGCTGAA 57.526 52.632 0.00 0.00 0.00 3.02
5478 9423 1.332178 GTCAACTCTCGACGCTGAAG 58.668 55.000 0.00 0.00 0.00 3.02
5479 9424 1.069159 GTCAACTCTCGACGCTGAAGA 60.069 52.381 0.00 0.00 0.00 2.87
5480 9425 1.607148 TCAACTCTCGACGCTGAAGAA 59.393 47.619 0.00 0.00 0.00 2.52
5481 9426 1.982223 CAACTCTCGACGCTGAAGAAG 59.018 52.381 0.00 0.00 0.00 2.85
5482 9427 1.524848 ACTCTCGACGCTGAAGAAGA 58.475 50.000 0.00 0.00 0.00 2.87
5483 9428 1.880675 ACTCTCGACGCTGAAGAAGAA 59.119 47.619 0.00 0.00 0.00 2.52
5484 9429 2.095466 ACTCTCGACGCTGAAGAAGAAG 60.095 50.000 0.00 0.00 0.00 2.85
5485 9430 1.200252 TCTCGACGCTGAAGAAGAAGG 59.800 52.381 0.00 0.00 0.00 3.46
5486 9431 0.243907 TCGACGCTGAAGAAGAAGGG 59.756 55.000 0.00 0.00 0.00 3.95
5487 9432 0.038159 CGACGCTGAAGAAGAAGGGT 60.038 55.000 0.00 0.00 41.74 4.34
5488 9433 1.605712 CGACGCTGAAGAAGAAGGGTT 60.606 52.381 0.00 0.00 39.43 4.11
5489 9434 2.495084 GACGCTGAAGAAGAAGGGTTT 58.505 47.619 0.00 0.00 39.43 3.27
5490 9435 2.480802 GACGCTGAAGAAGAAGGGTTTC 59.519 50.000 0.00 0.00 39.43 2.78
5491 9436 2.158813 ACGCTGAAGAAGAAGGGTTTCA 60.159 45.455 0.00 0.00 36.27 2.69
5492 9437 2.224314 CGCTGAAGAAGAAGGGTTTCAC 59.776 50.000 0.00 0.00 35.70 3.18
5493 9438 3.214328 GCTGAAGAAGAAGGGTTTCACA 58.786 45.455 0.00 0.00 35.70 3.58
5494 9439 3.632145 GCTGAAGAAGAAGGGTTTCACAA 59.368 43.478 0.00 0.00 35.70 3.33
5495 9440 4.498177 GCTGAAGAAGAAGGGTTTCACAAC 60.498 45.833 0.00 0.00 35.70 3.32
5496 9441 4.594970 TGAAGAAGAAGGGTTTCACAACA 58.405 39.130 0.00 0.00 35.70 3.33
5497 9442 5.200483 TGAAGAAGAAGGGTTTCACAACAT 58.800 37.500 0.00 0.00 35.70 2.71
5498 9443 5.067674 TGAAGAAGAAGGGTTTCACAACATG 59.932 40.000 0.00 0.00 35.70 3.21
5499 9444 4.792068 AGAAGAAGGGTTTCACAACATGA 58.208 39.130 0.00 0.00 35.70 3.07
5500 9445 5.200483 AGAAGAAGGGTTTCACAACATGAA 58.800 37.500 0.00 0.00 45.92 2.57
5508 9453 3.980646 TTCACAACATGAAGGGTTTCG 57.019 42.857 0.00 0.00 42.62 3.46
5509 9454 1.606668 TCACAACATGAAGGGTTTCGC 59.393 47.619 0.00 0.00 36.04 4.70
5510 9455 0.591170 ACAACATGAAGGGTTTCGCG 59.409 50.000 0.00 0.00 36.04 5.87
5511 9456 0.109781 CAACATGAAGGGTTTCGCGG 60.110 55.000 6.13 0.00 36.04 6.46
5512 9457 0.250553 AACATGAAGGGTTTCGCGGA 60.251 50.000 6.13 0.00 36.04 5.54
5513 9458 0.953960 ACATGAAGGGTTTCGCGGAC 60.954 55.000 6.13 5.54 36.04 4.79
5514 9459 1.740296 ATGAAGGGTTTCGCGGACG 60.740 57.895 6.13 0.00 42.01 4.79
5515 9460 3.785499 GAAGGGTTTCGCGGACGC 61.785 66.667 18.05 18.05 39.84 5.19
5519 9464 4.160635 GGTTTCGCGGACGCCATG 62.161 66.667 6.13 0.00 39.84 3.66
5520 9465 4.160635 GTTTCGCGGACGCCATGG 62.161 66.667 7.63 7.63 39.84 3.66
5542 9487 3.462678 GGTGGGGTCGCCTCTCTC 61.463 72.222 7.55 0.00 40.31 3.20
5543 9488 3.462678 GTGGGGTCGCCTCTCTCC 61.463 72.222 7.55 0.00 0.00 3.71
5545 9490 4.816984 GGGGTCGCCTCTCTCCGA 62.817 72.222 0.00 0.00 0.00 4.55
5546 9491 2.519780 GGGTCGCCTCTCTCCGAT 60.520 66.667 0.00 0.00 35.76 4.18
5547 9492 2.725008 GGTCGCCTCTCTCCGATG 59.275 66.667 0.00 0.00 35.76 3.84
5548 9493 1.824329 GGTCGCCTCTCTCCGATGA 60.824 63.158 0.00 0.00 35.76 2.92
5549 9494 1.175983 GGTCGCCTCTCTCCGATGAT 61.176 60.000 0.00 0.00 35.76 2.45
5550 9495 0.039617 GTCGCCTCTCTCCGATGATG 60.040 60.000 0.00 0.00 35.76 3.07
5551 9496 0.179018 TCGCCTCTCTCCGATGATGA 60.179 55.000 0.00 0.00 0.00 2.92
5552 9497 0.240678 CGCCTCTCTCCGATGATGAG 59.759 60.000 0.00 0.00 0.00 2.90
5553 9498 0.602562 GCCTCTCTCCGATGATGAGG 59.397 60.000 0.00 0.00 40.88 3.86
5554 9499 1.993956 CCTCTCTCCGATGATGAGGT 58.006 55.000 0.00 0.00 36.85 3.85
5555 9500 1.612950 CCTCTCTCCGATGATGAGGTG 59.387 57.143 0.00 0.00 36.85 4.00
5556 9501 2.580962 CTCTCTCCGATGATGAGGTGA 58.419 52.381 0.00 0.00 0.00 4.02
5557 9502 3.156293 CTCTCTCCGATGATGAGGTGAT 58.844 50.000 0.00 0.00 30.80 3.06
5558 9503 3.153130 TCTCTCCGATGATGAGGTGATC 58.847 50.000 0.00 0.00 30.80 2.92
5559 9504 1.882623 TCTCCGATGATGAGGTGATCG 59.117 52.381 0.00 0.00 42.57 3.69
5560 9505 1.882623 CTCCGATGATGAGGTGATCGA 59.117 52.381 0.00 0.00 45.23 3.59
5561 9506 1.609072 TCCGATGATGAGGTGATCGAC 59.391 52.381 0.00 0.00 45.23 4.20
5562 9507 1.611006 CCGATGATGAGGTGATCGACT 59.389 52.381 0.00 0.00 45.23 4.18
5563 9508 2.814336 CCGATGATGAGGTGATCGACTA 59.186 50.000 0.00 0.00 45.23 2.59
5564 9509 3.365465 CCGATGATGAGGTGATCGACTAC 60.365 52.174 0.00 0.00 45.23 2.73
5565 9510 3.251004 CGATGATGAGGTGATCGACTACA 59.749 47.826 0.00 0.00 45.23 2.74
5566 9511 4.612486 CGATGATGAGGTGATCGACTACAG 60.612 50.000 0.00 0.00 45.23 2.74
5567 9512 2.359214 TGATGAGGTGATCGACTACAGC 59.641 50.000 9.28 9.28 35.19 4.40
5568 9513 0.733150 TGAGGTGATCGACTACAGCG 59.267 55.000 10.84 0.00 39.13 5.18
5569 9514 0.733729 GAGGTGATCGACTACAGCGT 59.266 55.000 10.84 2.97 39.13 5.07
5570 9515 0.733729 AGGTGATCGACTACAGCGTC 59.266 55.000 10.84 0.00 39.13 5.19
5577 9522 1.225963 GACTACAGCGTCGTCGGTC 60.226 63.158 3.30 0.00 46.12 4.79
5578 9523 1.633852 GACTACAGCGTCGTCGGTCT 61.634 60.000 3.30 0.00 46.12 3.85
5579 9524 1.060622 CTACAGCGTCGTCGGTCTC 59.939 63.158 3.30 0.00 46.12 3.36
5580 9525 2.613814 CTACAGCGTCGTCGGTCTCG 62.614 65.000 3.30 0.00 46.12 4.04
5581 9526 4.813526 CAGCGTCGTCGGTCTCGG 62.814 72.222 3.30 0.00 46.12 4.63
5588 9533 3.827898 GTCGGTCTCGGGCCTCAG 61.828 72.222 0.84 0.00 36.95 3.35
5589 9534 4.361971 TCGGTCTCGGGCCTCAGT 62.362 66.667 0.84 0.00 36.95 3.41
5590 9535 2.439701 CGGTCTCGGGCCTCAGTA 60.440 66.667 0.84 0.00 0.00 2.74
5591 9536 2.772691 CGGTCTCGGGCCTCAGTAC 61.773 68.421 0.84 0.00 0.00 2.73
5592 9537 2.772691 GGTCTCGGGCCTCAGTACG 61.773 68.421 0.84 0.00 0.00 3.67
5593 9538 1.748122 GTCTCGGGCCTCAGTACGA 60.748 63.158 0.84 0.11 0.00 3.43
5594 9539 3.111939 CTCGGGCCTCAGTACGAG 58.888 66.667 11.59 11.59 45.34 4.18
5595 9540 1.749638 CTCGGGCCTCAGTACGAGT 60.750 63.158 16.01 0.00 45.48 4.18
5596 9541 1.716826 CTCGGGCCTCAGTACGAGTC 61.717 65.000 16.01 1.86 45.48 3.36
5597 9542 2.772691 CGGGCCTCAGTACGAGTCC 61.773 68.421 0.84 9.20 39.19 3.85
5598 9543 3.208335 GGCCTCAGTACGAGTCCC 58.792 66.667 0.00 8.81 40.48 4.46
5599 9544 1.380112 GGCCTCAGTACGAGTCCCT 60.380 63.158 0.00 0.00 40.48 4.20
5600 9545 1.385756 GGCCTCAGTACGAGTCCCTC 61.386 65.000 0.00 0.00 40.48 4.30
5601 9546 1.385756 GCCTCAGTACGAGTCCCTCC 61.386 65.000 11.85 0.00 40.48 4.30
5602 9547 0.034380 CCTCAGTACGAGTCCCTCCA 60.034 60.000 11.85 0.00 40.48 3.86
5603 9548 1.384525 CTCAGTACGAGTCCCTCCAG 58.615 60.000 0.00 0.00 36.94 3.86
5604 9549 0.680280 TCAGTACGAGTCCCTCCAGC 60.680 60.000 0.00 0.00 0.00 4.85
5605 9550 0.965866 CAGTACGAGTCCCTCCAGCA 60.966 60.000 0.00 0.00 0.00 4.41
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
8 9 9.805204 AATTCTTCTCCCTGGGTGTATATATAT 57.195 33.333 13.56 0.00 0.00 0.86
10 11 9.047947 GTAATTCTTCTCCCTGGGTGTATATAT 57.952 37.037 13.56 1.04 0.00 0.86
13 14 6.449956 AGTAATTCTTCTCCCTGGGTGTATA 58.550 40.000 13.56 0.00 0.00 1.47
14 15 5.289510 AGTAATTCTTCTCCCTGGGTGTAT 58.710 41.667 13.56 1.31 0.00 2.29
15 16 4.695606 AGTAATTCTTCTCCCTGGGTGTA 58.304 43.478 13.56 3.07 0.00 2.90
17 18 4.576330 AAGTAATTCTTCTCCCTGGGTG 57.424 45.455 13.56 10.90 0.00 4.61
49 50 0.392706 TAGCGCGGTCAATGGATCAT 59.607 50.000 16.92 0.00 0.00 2.45
51 52 0.529773 TGTAGCGCGGTCAATGGATC 60.530 55.000 16.92 0.00 0.00 3.36
52 53 0.530650 CTGTAGCGCGGTCAATGGAT 60.531 55.000 16.92 0.00 0.00 3.41
69 70 2.816958 CACCTGCGCCTAGTGCTG 60.817 66.667 4.18 1.00 40.03 4.41
72 73 2.124983 ATGCACCTGCGCCTAGTG 60.125 61.111 14.99 14.99 45.83 2.74
74 75 2.176273 GTCATGCACCTGCGCCTAG 61.176 63.158 4.18 0.00 45.83 3.02
75 76 2.125147 GTCATGCACCTGCGCCTA 60.125 61.111 4.18 0.00 45.83 3.93
78 79 2.947938 ATAGGGTCATGCACCTGCGC 62.948 60.000 15.73 0.00 45.95 6.09
79 80 0.882042 GATAGGGTCATGCACCTGCG 60.882 60.000 15.73 0.00 45.95 5.18
80 81 0.882042 CGATAGGGTCATGCACCTGC 60.882 60.000 15.73 8.46 45.95 4.85
81 82 0.882042 GCGATAGGGTCATGCACCTG 60.882 60.000 15.73 0.00 45.95 4.00
83 84 1.598130 GGCGATAGGGTCATGCACC 60.598 63.158 0.00 5.94 45.97 5.01
84 85 0.463654 TTGGCGATAGGGTCATGCAC 60.464 55.000 0.00 0.00 0.00 4.57
86 87 0.663153 GTTTGGCGATAGGGTCATGC 59.337 55.000 0.00 0.00 0.00 4.06
87 88 2.036958 TGTTTGGCGATAGGGTCATG 57.963 50.000 0.00 0.00 0.00 3.07
89 90 2.364632 CATTGTTTGGCGATAGGGTCA 58.635 47.619 0.00 0.00 0.00 4.02
90 91 1.065551 GCATTGTTTGGCGATAGGGTC 59.934 52.381 0.00 0.00 0.00 4.46
91 92 1.102978 GCATTGTTTGGCGATAGGGT 58.897 50.000 0.00 0.00 0.00 4.34
100 101 1.136565 CTACCGCCGCATTGTTTGG 59.863 57.895 0.00 0.00 0.00 3.28
102 103 1.241315 AAGCTACCGCCGCATTGTTT 61.241 50.000 0.00 0.00 36.60 2.83
104 105 0.179056 ATAAGCTACCGCCGCATTGT 60.179 50.000 0.00 0.00 36.60 2.71
106 107 2.140717 GTAATAAGCTACCGCCGCATT 58.859 47.619 0.00 0.00 36.60 3.56
107 108 1.069513 TGTAATAAGCTACCGCCGCAT 59.930 47.619 0.00 0.00 36.60 4.73
108 109 0.460722 TGTAATAAGCTACCGCCGCA 59.539 50.000 0.00 0.00 36.60 5.69
109 110 0.857287 GTGTAATAAGCTACCGCCGC 59.143 55.000 0.00 0.00 36.60 6.53
112 113 2.904697 AGGGTGTAATAAGCTACCGC 57.095 50.000 0.00 0.00 34.01 5.68
113 114 3.638160 TGGTAGGGTGTAATAAGCTACCG 59.362 47.826 0.00 0.00 38.43 4.02
115 116 4.406649 TGGTGGTAGGGTGTAATAAGCTAC 59.593 45.833 0.00 0.00 0.00 3.58
116 117 4.622815 TGGTGGTAGGGTGTAATAAGCTA 58.377 43.478 0.00 0.00 0.00 3.32
117 118 3.454812 CTGGTGGTAGGGTGTAATAAGCT 59.545 47.826 0.00 0.00 0.00 3.74
120 121 2.506644 GGCTGGTGGTAGGGTGTAATAA 59.493 50.000 0.00 0.00 0.00 1.40
122 123 0.916809 GGCTGGTGGTAGGGTGTAAT 59.083 55.000 0.00 0.00 0.00 1.89
123 124 0.178885 AGGCTGGTGGTAGGGTGTAA 60.179 55.000 0.00 0.00 0.00 2.41
124 125 0.616679 GAGGCTGGTGGTAGGGTGTA 60.617 60.000 0.00 0.00 0.00 2.90
127 128 0.341961 TATGAGGCTGGTGGTAGGGT 59.658 55.000 0.00 0.00 0.00 4.34
140 141 0.243907 CGACCATACCGCCTATGAGG 59.756 60.000 0.99 0.00 35.06 3.86
142 143 1.405872 AACGACCATACCGCCTATGA 58.594 50.000 0.00 0.00 35.06 2.15
143 144 2.352421 CCTAACGACCATACCGCCTATG 60.352 54.545 0.00 0.00 33.09 2.23
157 158 2.101750 TGTTGCTGACTTGTCCTAACGA 59.898 45.455 0.00 0.00 0.00 3.85
222 277 0.748005 GGTTGATGGTACGGCTGCAT 60.748 55.000 0.50 0.00 0.00 3.96
223 278 1.376683 GGTTGATGGTACGGCTGCA 60.377 57.895 0.50 0.00 0.00 4.41
224 279 0.177141 TAGGTTGATGGTACGGCTGC 59.823 55.000 0.00 0.00 0.00 5.25
225 280 1.472728 GGTAGGTTGATGGTACGGCTG 60.473 57.143 0.00 0.00 0.00 4.85
226 281 0.828677 GGTAGGTTGATGGTACGGCT 59.171 55.000 0.00 0.00 0.00 5.52
227 282 0.179065 GGGTAGGTTGATGGTACGGC 60.179 60.000 0.00 0.00 0.00 5.68
228 283 0.103572 CGGGTAGGTTGATGGTACGG 59.896 60.000 0.00 0.00 0.00 4.02
229 284 0.819582 ACGGGTAGGTTGATGGTACG 59.180 55.000 0.00 0.00 0.00 3.67
321 376 3.432933 CCGGCCAAATTTGATGTTTTGAG 59.567 43.478 19.86 0.58 35.34 3.02
350 705 2.612746 GCCACCTTCCCCACCCTA 60.613 66.667 0.00 0.00 0.00 3.53
433 788 1.517257 CATCGCCGTCTCTGTCCAC 60.517 63.158 0.00 0.00 0.00 4.02
601 956 3.596046 AGCTAGATAGATACCCCTCTGCT 59.404 47.826 0.00 0.00 0.00 4.24
604 959 5.247337 GCAAAAGCTAGATAGATACCCCTCT 59.753 44.000 0.00 0.00 0.00 3.69
605 960 5.483811 GCAAAAGCTAGATAGATACCCCTC 58.516 45.833 0.00 0.00 0.00 4.30
620 2356 1.043022 CTTGTTGGAGGGCAAAAGCT 58.957 50.000 0.00 0.00 0.00 3.74
621 2357 1.039856 TCTTGTTGGAGGGCAAAAGC 58.960 50.000 0.00 0.00 0.00 3.51
622 2358 2.232208 GGATCTTGTTGGAGGGCAAAAG 59.768 50.000 0.00 0.00 0.00 2.27
626 2362 1.299648 CGGATCTTGTTGGAGGGCA 59.700 57.895 0.00 0.00 0.00 5.36
627 2363 0.744771 GACGGATCTTGTTGGAGGGC 60.745 60.000 0.00 0.00 0.00 5.19
628 2364 0.905357 AGACGGATCTTGTTGGAGGG 59.095 55.000 0.00 0.00 0.00 4.30
632 2368 1.202582 ACGAGAGACGGATCTTGTTGG 59.797 52.381 6.28 0.00 40.39 3.77
651 2387 2.494073 ACCTTGAATCGACTGGAGAGAC 59.506 50.000 0.00 0.00 0.00 3.36
680 2416 1.066858 AGTGTGGTGTAGCTGGATTCG 60.067 52.381 0.00 0.00 0.00 3.34
737 2476 4.668289 ACAATTGAAACGGAAAGACACAC 58.332 39.130 13.59 0.00 0.00 3.82
839 2757 6.128138 AGAGGCTAGTAACAAATCCAAAGT 57.872 37.500 0.00 0.00 0.00 2.66
1402 3322 5.589452 AGGCTTCTAGCTTGATGAAATTGAG 59.411 40.000 13.83 0.92 41.99 3.02
1557 3477 0.038526 AACTCTTGTCACCTACCGCG 60.039 55.000 0.00 0.00 0.00 6.46
1576 3496 1.374125 CGACCACAATGAGGCGACA 60.374 57.895 7.48 0.00 0.00 4.35
1756 3676 2.128226 ACCCCCTCCAGGCAGATT 59.872 61.111 0.00 0.00 0.00 2.40
2056 3977 6.922957 GGTCCCAAACGACGTGTATTATATTA 59.077 38.462 0.00 0.00 33.30 0.98
2352 5168 5.772825 TCAACTTCTGGTTCATTTTCCTG 57.227 39.130 0.00 0.00 35.74 3.86
2377 5193 4.281182 TCTGAAACCCGATATCTTCTAGCC 59.719 45.833 0.34 0.00 0.00 3.93
2390 5206 4.497473 TTTTGCTACAATCTGAAACCCG 57.503 40.909 0.00 0.00 0.00 5.28
2628 5447 9.941664 GGACACAATTTCAGTATCATTTATCAG 57.058 33.333 0.00 0.00 0.00 2.90
2993 5812 0.519077 GCTGACTTTTGAGGCTTCCG 59.481 55.000 0.00 0.00 0.00 4.30
2998 5817 1.246737 CCCAGGCTGACTTTTGAGGC 61.247 60.000 17.94 0.00 35.02 4.70
3219 6041 6.709846 AGCTTGATAATGCTATCAGGAAGTTC 59.290 38.462 8.68 0.00 43.75 3.01
3572 6400 3.829948 CACATCAAACAGTGCCTCAATC 58.170 45.455 0.00 0.00 0.00 2.67
3581 6409 4.256920 GAGGACATAGCACATCAAACAGT 58.743 43.478 0.00 0.00 0.00 3.55
3582 6410 4.256110 TGAGGACATAGCACATCAAACAG 58.744 43.478 0.00 0.00 0.00 3.16
3865 6693 2.421073 GGAAACGTAACAGCCCCAATAC 59.579 50.000 0.00 0.00 0.00 1.89
3866 6694 2.618559 GGGAAACGTAACAGCCCCAATA 60.619 50.000 0.00 0.00 34.10 1.90
3867 6695 1.541379 GGAAACGTAACAGCCCCAAT 58.459 50.000 0.00 0.00 0.00 3.16
3868 6696 0.537828 GGGAAACGTAACAGCCCCAA 60.538 55.000 0.00 0.00 34.10 4.12
3869 6697 1.073548 GGGAAACGTAACAGCCCCA 59.926 57.895 0.00 0.00 34.10 4.96
3870 6698 0.537828 TTGGGAAACGTAACAGCCCC 60.538 55.000 0.00 0.00 38.02 5.80
3871 6699 1.001048 GTTTGGGAAACGTAACAGCCC 60.001 52.381 0.00 0.00 39.29 5.19
3988 6816 4.788201 GCATACGACTCAGTTTGCAACAAA 60.788 41.667 0.00 0.00 44.59 2.83
4002 6830 0.033011 AGTCCTGGAGGCATACGACT 60.033 55.000 0.00 0.00 34.44 4.18
4224 7920 6.789898 GAGAAACTCTCACATGGAGTCTCCA 61.790 48.000 23.92 23.92 45.92 3.86
4305 8001 1.221840 CCGCTAGGTTGCAGGTCAT 59.778 57.895 0.00 0.00 0.00 3.06
4358 8054 2.398588 TGACTGAACTTGTCCCACTCT 58.601 47.619 0.00 0.00 33.83 3.24
4409 8105 3.064545 GCCATTTCTTCTCATCTTCACCG 59.935 47.826 0.00 0.00 0.00 4.94
4412 8108 3.686241 CGTGCCATTTCTTCTCATCTTCA 59.314 43.478 0.00 0.00 0.00 3.02
4743 8661 7.556275 CAGCCTTAATTTACTTGATTCCACCTA 59.444 37.037 0.00 0.00 0.00 3.08
4784 8729 0.179108 GGCCAACTCACTAGCCGTAG 60.179 60.000 0.00 0.00 35.30 3.51
4785 8730 1.895238 GGCCAACTCACTAGCCGTA 59.105 57.895 0.00 0.00 35.30 4.02
4786 8731 2.663196 GGCCAACTCACTAGCCGT 59.337 61.111 0.00 0.00 35.30 5.68
4788 8733 1.379642 GCATGGCCAACTCACTAGCC 61.380 60.000 10.96 0.00 45.96 3.93
4789 8734 0.677731 TGCATGGCCAACTCACTAGC 60.678 55.000 10.96 4.69 0.00 3.42
4790 8735 1.825090 TTGCATGGCCAACTCACTAG 58.175 50.000 10.96 0.00 0.00 2.57
4791 8736 1.885887 GTTTGCATGGCCAACTCACTA 59.114 47.619 10.96 0.00 32.52 2.74
4792 8737 0.675633 GTTTGCATGGCCAACTCACT 59.324 50.000 10.96 0.00 32.52 3.41
4793 8738 0.319813 GGTTTGCATGGCCAACTCAC 60.320 55.000 10.96 2.91 35.07 3.51
4794 8739 1.470996 GGGTTTGCATGGCCAACTCA 61.471 55.000 10.96 5.00 35.20 3.41
4795 8740 1.293179 GGGTTTGCATGGCCAACTC 59.707 57.895 10.96 0.00 35.07 3.01
4796 8741 2.216331 GGGGTTTGCATGGCCAACT 61.216 57.895 10.96 0.00 35.07 3.16
4797 8742 2.347114 GGGGTTTGCATGGCCAAC 59.653 61.111 10.96 5.71 34.14 3.77
4798 8743 2.927317 GGGGGTTTGCATGGCCAA 60.927 61.111 10.96 0.00 0.00 4.52
4801 8746 2.830186 TAGTCGGGGGTTTGCATGGC 62.830 60.000 0.00 0.00 0.00 4.40
4802 8747 1.029947 GTAGTCGGGGGTTTGCATGG 61.030 60.000 0.00 0.00 0.00 3.66
4803 8748 0.035439 AGTAGTCGGGGGTTTGCATG 60.035 55.000 0.00 0.00 0.00 4.06
4804 8749 0.035439 CAGTAGTCGGGGGTTTGCAT 60.035 55.000 0.00 0.00 0.00 3.96
4805 8750 1.373435 CAGTAGTCGGGGGTTTGCA 59.627 57.895 0.00 0.00 0.00 4.08
4806 8751 0.953960 CACAGTAGTCGGGGGTTTGC 60.954 60.000 0.00 0.00 0.00 3.68
4807 8752 0.682852 TCACAGTAGTCGGGGGTTTG 59.317 55.000 0.00 0.00 0.00 2.93
4808 8753 1.278127 CATCACAGTAGTCGGGGGTTT 59.722 52.381 0.00 0.00 0.00 3.27
4809 8754 0.902531 CATCACAGTAGTCGGGGGTT 59.097 55.000 0.00 0.00 0.00 4.11
4810 8755 0.976073 CCATCACAGTAGTCGGGGGT 60.976 60.000 0.00 0.00 0.00 4.95
4811 8756 0.976073 ACCATCACAGTAGTCGGGGG 60.976 60.000 0.00 0.00 0.00 5.40
4933 8878 4.523943 TCTGAATTGCAGCACTACCATTTT 59.476 37.500 0.00 0.00 44.52 1.82
4948 8893 8.997323 AGTTTCTTGACTAACATCTCTGAATTG 58.003 33.333 0.00 0.00 0.00 2.32
4954 8899 6.426646 ACCAGTTTCTTGACTAACATCTCT 57.573 37.500 0.00 0.00 0.00 3.10
4968 8913 6.990349 CCGGATTACAACATATACCAGTTTCT 59.010 38.462 0.00 0.00 0.00 2.52
4973 8918 6.340962 TCTCCGGATTACAACATATACCAG 57.659 41.667 3.57 0.00 0.00 4.00
4982 8927 5.116180 TGATTCACATCTCCGGATTACAAC 58.884 41.667 3.57 0.00 0.00 3.32
4992 8937 8.688747 ATTCTATTTTCCTGATTCACATCTCC 57.311 34.615 0.00 0.00 0.00 3.71
5089 9034 6.562608 AGGAGATATACCATGTATTGTGGGTT 59.437 38.462 0.00 0.00 41.14 4.11
5194 9139 0.375454 TTGCCAAACTGACAACGACG 59.625 50.000 0.00 0.00 0.00 5.12
5211 9156 1.162800 GCGCTCCATAGGCTTCCTTG 61.163 60.000 0.00 0.00 34.61 3.61
5233 9178 4.444838 TTCGGTGATCGTGGCCGG 62.445 66.667 14.68 0.00 44.97 6.13
5234 9179 2.885644 CTTCGGTGATCGTGGCCG 60.886 66.667 0.00 10.32 46.12 6.13
5235 9180 2.511600 CCTTCGGTGATCGTGGCC 60.512 66.667 0.00 0.00 40.32 5.36
5236 9181 1.519455 CTCCTTCGGTGATCGTGGC 60.519 63.158 0.00 0.00 40.32 5.01
5237 9182 0.179134 GTCTCCTTCGGTGATCGTGG 60.179 60.000 0.00 0.00 40.32 4.94
5238 9183 0.523546 CGTCTCCTTCGGTGATCGTG 60.524 60.000 0.00 0.00 40.32 4.35
5239 9184 1.654954 CCGTCTCCTTCGGTGATCGT 61.655 60.000 0.00 0.00 42.62 3.73
5240 9185 1.064296 CCGTCTCCTTCGGTGATCG 59.936 63.158 0.00 0.00 42.62 3.69
5247 9192 0.389948 CCTTGGAACCGTCTCCTTCG 60.390 60.000 2.08 0.00 36.35 3.79
5248 9193 0.673956 GCCTTGGAACCGTCTCCTTC 60.674 60.000 2.08 0.00 36.35 3.46
5249 9194 1.375326 GCCTTGGAACCGTCTCCTT 59.625 57.895 2.08 0.00 36.35 3.36
5250 9195 2.593956 GGCCTTGGAACCGTCTCCT 61.594 63.158 0.00 0.00 36.35 3.69
5251 9196 2.046217 GGCCTTGGAACCGTCTCC 60.046 66.667 0.00 0.00 35.88 3.71
5252 9197 2.434359 CGGCCTTGGAACCGTCTC 60.434 66.667 0.00 0.00 44.46 3.36
5257 9202 2.671963 GGTCACGGCCTTGGAACC 60.672 66.667 9.71 6.87 0.00 3.62
5258 9203 1.515521 CTTGGTCACGGCCTTGGAAC 61.516 60.000 9.71 2.75 0.00 3.62
5259 9204 1.228124 CTTGGTCACGGCCTTGGAA 60.228 57.895 9.71 0.00 0.00 3.53
5260 9205 2.429930 CTTGGTCACGGCCTTGGA 59.570 61.111 9.71 0.00 0.00 3.53
5261 9206 3.365265 GCTTGGTCACGGCCTTGG 61.365 66.667 9.71 0.00 0.00 3.61
5262 9207 3.365265 GGCTTGGTCACGGCCTTG 61.365 66.667 1.99 1.99 42.31 3.61
5263 9208 4.660938 GGGCTTGGTCACGGCCTT 62.661 66.667 11.80 0.00 44.70 4.35
5265 9210 4.966787 TTGGGCTTGGTCACGGCC 62.967 66.667 12.10 12.10 44.13 6.13
5266 9211 3.670377 GTTGGGCTTGGTCACGGC 61.670 66.667 0.00 0.00 0.00 5.68
5267 9212 2.983592 GGTTGGGCTTGGTCACGG 60.984 66.667 0.00 0.00 0.00 4.94
5268 9213 2.983592 GGGTTGGGCTTGGTCACG 60.984 66.667 0.00 0.00 0.00 4.35
5269 9214 2.983592 CGGGTTGGGCTTGGTCAC 60.984 66.667 0.00 0.00 0.00 3.67
5270 9215 4.278513 CCGGGTTGGGCTTGGTCA 62.279 66.667 0.00 0.00 0.00 4.02
5271 9216 3.920093 CTCCGGGTTGGGCTTGGTC 62.920 68.421 0.00 0.00 38.76 4.02
5272 9217 3.966543 CTCCGGGTTGGGCTTGGT 61.967 66.667 0.00 0.00 38.76 3.67
5273 9218 2.598787 TACTCCGGGTTGGGCTTGG 61.599 63.158 0.00 0.00 38.76 3.61
5274 9219 1.376812 GTACTCCGGGTTGGGCTTG 60.377 63.158 0.00 0.00 38.76 4.01
5275 9220 2.951101 CGTACTCCGGGTTGGGCTT 61.951 63.158 0.00 0.00 38.76 4.35
5276 9221 3.387947 CGTACTCCGGGTTGGGCT 61.388 66.667 0.00 0.00 38.76 5.19
5278 9223 4.462280 GGCGTACTCCGGGTTGGG 62.462 72.222 0.00 0.00 38.76 4.12
5279 9224 2.951101 AAGGCGTACTCCGGGTTGG 61.951 63.158 0.00 0.00 36.94 3.77
5280 9225 1.740296 CAAGGCGTACTCCGGGTTG 60.740 63.158 0.00 0.00 36.94 3.77
5281 9226 2.212110 ACAAGGCGTACTCCGGGTT 61.212 57.895 0.00 0.00 36.94 4.11
5282 9227 2.602568 ACAAGGCGTACTCCGGGT 60.603 61.111 0.00 0.32 36.94 5.28
5283 9228 2.125673 CACAAGGCGTACTCCGGG 60.126 66.667 0.00 0.00 36.94 5.73
5284 9229 2.125673 CCACAAGGCGTACTCCGG 60.126 66.667 0.00 0.00 36.94 5.14
5285 9230 1.005394 AACCACAAGGCGTACTCCG 60.005 57.895 0.00 0.00 39.06 4.63
5286 9231 0.320697 AGAACCACAAGGCGTACTCC 59.679 55.000 0.00 0.00 39.06 3.85
5287 9232 2.029649 TGTAGAACCACAAGGCGTACTC 60.030 50.000 0.00 0.00 39.06 2.59
5288 9233 1.965643 TGTAGAACCACAAGGCGTACT 59.034 47.619 0.00 0.00 39.06 2.73
5289 9234 2.064014 GTGTAGAACCACAAGGCGTAC 58.936 52.381 0.00 0.00 39.06 3.67
5290 9235 1.687660 TGTGTAGAACCACAAGGCGTA 59.312 47.619 0.00 0.00 42.13 4.42
5291 9236 0.466543 TGTGTAGAACCACAAGGCGT 59.533 50.000 0.00 0.00 42.13 5.68
5292 9237 1.148310 CTGTGTAGAACCACAAGGCG 58.852 55.000 0.00 0.00 44.25 5.52
5293 9238 1.202770 ACCTGTGTAGAACCACAAGGC 60.203 52.381 0.00 0.00 44.25 4.35
5294 9239 2.104111 TGACCTGTGTAGAACCACAAGG 59.896 50.000 0.00 0.00 44.25 3.61
5295 9240 3.393800 CTGACCTGTGTAGAACCACAAG 58.606 50.000 0.00 0.00 44.25 3.16
5296 9241 2.484770 GCTGACCTGTGTAGAACCACAA 60.485 50.000 0.00 0.00 44.25 3.33
5297 9242 1.070134 GCTGACCTGTGTAGAACCACA 59.930 52.381 0.00 0.00 42.81 4.17
5298 9243 1.797025 GCTGACCTGTGTAGAACCAC 58.203 55.000 0.00 0.00 35.86 4.16
5299 9244 0.317160 CGCTGACCTGTGTAGAACCA 59.683 55.000 0.00 0.00 0.00 3.67
5300 9245 0.317479 ACGCTGACCTGTGTAGAACC 59.683 55.000 0.00 0.00 0.00 3.62
5301 9246 2.150397 AACGCTGACCTGTGTAGAAC 57.850 50.000 0.00 0.00 0.00 3.01
5302 9247 2.902705 AAACGCTGACCTGTGTAGAA 57.097 45.000 0.00 0.00 0.00 2.10
5303 9248 2.364324 AGAAAACGCTGACCTGTGTAGA 59.636 45.455 0.00 0.00 0.00 2.59
5304 9249 2.755650 AGAAAACGCTGACCTGTGTAG 58.244 47.619 0.00 0.00 0.00 2.74
5305 9250 2.902705 AGAAAACGCTGACCTGTGTA 57.097 45.000 0.00 0.00 0.00 2.90
5306 9251 2.038387 AAGAAAACGCTGACCTGTGT 57.962 45.000 0.00 0.00 0.00 3.72
5307 9252 2.096218 GCTAAGAAAACGCTGACCTGTG 60.096 50.000 0.00 0.00 0.00 3.66
5308 9253 2.143925 GCTAAGAAAACGCTGACCTGT 58.856 47.619 0.00 0.00 0.00 4.00
5309 9254 2.143122 TGCTAAGAAAACGCTGACCTG 58.857 47.619 0.00 0.00 0.00 4.00
5310 9255 2.543777 TGCTAAGAAAACGCTGACCT 57.456 45.000 0.00 0.00 0.00 3.85
5311 9256 2.096013 GGATGCTAAGAAAACGCTGACC 59.904 50.000 0.00 0.00 0.00 4.02
5312 9257 3.003480 AGGATGCTAAGAAAACGCTGAC 58.997 45.455 0.00 0.00 0.00 3.51
5313 9258 3.262420 GAGGATGCTAAGAAAACGCTGA 58.738 45.455 0.00 0.00 0.00 4.26
5314 9259 2.029728 CGAGGATGCTAAGAAAACGCTG 59.970 50.000 0.00 0.00 0.00 5.18
5315 9260 2.271800 CGAGGATGCTAAGAAAACGCT 58.728 47.619 0.00 0.00 0.00 5.07
5316 9261 2.000447 ACGAGGATGCTAAGAAAACGC 59.000 47.619 0.00 0.00 0.00 4.84
5317 9262 2.279136 CGACGAGGATGCTAAGAAAACG 59.721 50.000 0.00 0.00 0.00 3.60
5318 9263 2.603560 CCGACGAGGATGCTAAGAAAAC 59.396 50.000 0.00 0.00 45.00 2.43
5319 9264 2.888594 CCGACGAGGATGCTAAGAAAA 58.111 47.619 0.00 0.00 45.00 2.29
5320 9265 1.470979 GCCGACGAGGATGCTAAGAAA 60.471 52.381 0.00 0.00 45.00 2.52
5321 9266 0.102481 GCCGACGAGGATGCTAAGAA 59.898 55.000 0.00 0.00 45.00 2.52
5322 9267 0.752009 AGCCGACGAGGATGCTAAGA 60.752 55.000 0.00 0.00 45.00 2.10
5323 9268 0.318275 GAGCCGACGAGGATGCTAAG 60.318 60.000 0.00 0.00 39.82 2.18
5324 9269 1.734137 GAGCCGACGAGGATGCTAA 59.266 57.895 0.00 0.00 39.82 3.09
5325 9270 2.194212 GGAGCCGACGAGGATGCTA 61.194 63.158 0.00 0.00 43.90 3.49
5326 9271 3.532155 GGAGCCGACGAGGATGCT 61.532 66.667 0.00 0.00 43.90 3.79
5328 9273 1.300465 CATGGAGCCGACGAGGATG 60.300 63.158 0.00 0.00 39.82 3.51
5329 9274 1.455773 TCATGGAGCCGACGAGGAT 60.456 57.895 0.00 0.00 44.48 3.24
5330 9275 2.044352 TCATGGAGCCGACGAGGA 60.044 61.111 0.00 0.00 45.00 3.71
5331 9276 2.105128 GTCATGGAGCCGACGAGG 59.895 66.667 0.00 0.00 44.97 4.63
5332 9277 1.226802 CTGTCATGGAGCCGACGAG 60.227 63.158 0.00 0.00 34.78 4.18
5333 9278 1.657751 CTCTGTCATGGAGCCGACGA 61.658 60.000 0.00 0.00 34.78 4.20
5334 9279 1.226802 CTCTGTCATGGAGCCGACG 60.227 63.158 0.00 0.00 34.78 5.12
5335 9280 1.142748 CCTCTGTCATGGAGCCGAC 59.857 63.158 0.00 0.00 0.00 4.79
5336 9281 1.000359 TCCTCTGTCATGGAGCCGA 60.000 57.895 0.00 0.00 0.00 5.54
5337 9282 1.039785 TCTCCTCTGTCATGGAGCCG 61.040 60.000 14.07 0.00 46.90 5.52
5338 9283 1.344114 GATCTCCTCTGTCATGGAGCC 59.656 57.143 14.07 7.41 46.90 4.70
5339 9284 1.344114 GGATCTCCTCTGTCATGGAGC 59.656 57.143 14.07 4.89 46.90 4.70
5340 9285 2.961510 AGGATCTCCTCTGTCATGGAG 58.038 52.381 13.14 13.14 44.77 3.86
5352 9297 1.369321 GACATGGCCGAGGATCTCC 59.631 63.158 0.00 0.00 0.00 3.71
5353 9298 0.683973 ATGACATGGCCGAGGATCTC 59.316 55.000 0.00 0.00 0.00 2.75
5354 9299 0.683973 GATGACATGGCCGAGGATCT 59.316 55.000 0.00 0.00 0.00 2.75
5355 9300 0.668706 CGATGACATGGCCGAGGATC 60.669 60.000 0.00 0.00 0.00 3.36
5356 9301 1.368950 CGATGACATGGCCGAGGAT 59.631 57.895 0.00 0.00 0.00 3.24
5357 9302 2.796193 CCGATGACATGGCCGAGGA 61.796 63.158 0.00 0.00 0.00 3.71
5358 9303 2.280389 CCGATGACATGGCCGAGG 60.280 66.667 0.00 0.00 0.00 4.63
5359 9304 2.969238 GCCGATGACATGGCCGAG 60.969 66.667 14.50 0.00 45.73 4.63
5364 9309 3.576356 GTGCGGCCGATGACATGG 61.576 66.667 33.48 0.00 0.00 3.66
5365 9310 3.576356 GGTGCGGCCGATGACATG 61.576 66.667 33.48 0.00 0.00 3.21
5366 9311 4.094646 TGGTGCGGCCGATGACAT 62.095 61.111 33.48 0.00 41.21 3.06
5379 9324 1.945354 ATACAGAGGACGCGGTGGTG 61.945 60.000 12.47 3.44 0.00 4.17
5380 9325 1.681327 ATACAGAGGACGCGGTGGT 60.681 57.895 12.47 2.04 0.00 4.16
5381 9326 1.226974 CATACAGAGGACGCGGTGG 60.227 63.158 12.47 0.00 0.00 4.61
5382 9327 1.226974 CCATACAGAGGACGCGGTG 60.227 63.158 12.47 1.85 0.00 4.94
5383 9328 2.423898 CCCATACAGAGGACGCGGT 61.424 63.158 12.47 0.00 0.00 5.68
5384 9329 2.417516 CCCATACAGAGGACGCGG 59.582 66.667 12.47 0.00 0.00 6.46
5385 9330 2.279517 GCCCATACAGAGGACGCG 60.280 66.667 3.53 3.53 0.00 6.01
5386 9331 2.279517 CGCCCATACAGAGGACGC 60.280 66.667 0.00 0.00 0.00 5.19
5387 9332 1.226974 CACGCCCATACAGAGGACG 60.227 63.158 0.00 0.00 0.00 4.79
5388 9333 1.521681 GCACGCCCATACAGAGGAC 60.522 63.158 0.00 0.00 0.00 3.85
5389 9334 2.731571 GGCACGCCCATACAGAGGA 61.732 63.158 0.00 0.00 0.00 3.71
5390 9335 1.399744 TAGGCACGCCCATACAGAGG 61.400 60.000 3.95 0.00 36.58 3.69
5391 9336 0.032678 CTAGGCACGCCCATACAGAG 59.967 60.000 3.95 0.00 36.58 3.35
5392 9337 0.396556 TCTAGGCACGCCCATACAGA 60.397 55.000 3.95 0.00 36.58 3.41
5393 9338 0.032678 CTCTAGGCACGCCCATACAG 59.967 60.000 3.95 0.00 36.58 2.74
5394 9339 0.686441 ACTCTAGGCACGCCCATACA 60.686 55.000 3.95 0.00 36.58 2.29
5395 9340 0.032267 GACTCTAGGCACGCCCATAC 59.968 60.000 3.95 0.00 36.58 2.39
5396 9341 1.113517 GGACTCTAGGCACGCCCATA 61.114 60.000 3.95 0.00 36.58 2.74
5397 9342 2.435693 GGACTCTAGGCACGCCCAT 61.436 63.158 3.95 0.00 36.58 4.00
5398 9343 3.075005 GGACTCTAGGCACGCCCA 61.075 66.667 3.95 0.00 36.58 5.36
5399 9344 2.435693 ATGGACTCTAGGCACGCCC 61.436 63.158 3.95 0.00 36.58 6.13
5400 9345 1.227380 CATGGACTCTAGGCACGCC 60.227 63.158 0.00 0.00 0.00 5.68
5401 9346 0.108138 AACATGGACTCTAGGCACGC 60.108 55.000 0.00 0.00 0.00 5.34
5402 9347 1.478510 AGAACATGGACTCTAGGCACG 59.521 52.381 0.00 0.00 0.00 5.34
5403 9348 2.480416 CGAGAACATGGACTCTAGGCAC 60.480 54.545 15.67 0.00 0.00 5.01
5404 9349 1.751351 CGAGAACATGGACTCTAGGCA 59.249 52.381 15.67 0.00 0.00 4.75
5405 9350 1.067821 CCGAGAACATGGACTCTAGGC 59.932 57.143 15.67 0.00 29.27 3.93
5406 9351 1.067821 GCCGAGAACATGGACTCTAGG 59.932 57.143 15.67 14.43 37.47 3.02
5407 9352 1.268794 CGCCGAGAACATGGACTCTAG 60.269 57.143 15.67 10.07 0.00 2.43
5408 9353 0.738975 CGCCGAGAACATGGACTCTA 59.261 55.000 15.67 0.00 0.00 2.43
5409 9354 1.513158 CGCCGAGAACATGGACTCT 59.487 57.895 15.67 6.83 0.00 3.24
5410 9355 2.167861 GCGCCGAGAACATGGACTC 61.168 63.158 0.00 4.54 0.00 3.36
5411 9356 2.125512 GCGCCGAGAACATGGACT 60.126 61.111 0.00 0.00 0.00 3.85
5412 9357 2.434185 TGCGCCGAGAACATGGAC 60.434 61.111 4.18 0.00 0.00 4.02
5413 9358 2.125552 CTGCGCCGAGAACATGGA 60.126 61.111 4.18 0.00 0.00 3.41
5414 9359 1.091771 ATTCTGCGCCGAGAACATGG 61.092 55.000 11.91 0.00 34.79 3.66
5415 9360 1.524355 CTATTCTGCGCCGAGAACATG 59.476 52.381 11.91 0.00 34.79 3.21
5416 9361 1.539065 CCTATTCTGCGCCGAGAACAT 60.539 52.381 11.91 1.04 34.79 2.71
5417 9362 0.179111 CCTATTCTGCGCCGAGAACA 60.179 55.000 11.91 0.46 34.79 3.18
5418 9363 0.876342 CCCTATTCTGCGCCGAGAAC 60.876 60.000 11.91 0.00 34.79 3.01
5419 9364 1.441729 CCCTATTCTGCGCCGAGAA 59.558 57.895 12.04 12.04 36.41 2.87
5420 9365 3.129300 CCCTATTCTGCGCCGAGA 58.871 61.111 4.18 0.00 0.00 4.04
5421 9366 2.663188 GCCCTATTCTGCGCCGAG 60.663 66.667 4.18 0.00 0.00 4.63
5422 9367 4.235762 GGCCCTATTCTGCGCCGA 62.236 66.667 4.18 0.00 0.00 5.54
5426 9371 4.626081 CCCCGGCCCTATTCTGCG 62.626 72.222 0.00 0.00 0.00 5.18
5427 9372 3.489513 ACCCCGGCCCTATTCTGC 61.490 66.667 0.00 0.00 0.00 4.26
5428 9373 2.510906 CACCCCGGCCCTATTCTG 59.489 66.667 0.00 0.00 0.00 3.02
5429 9374 3.489513 GCACCCCGGCCCTATTCT 61.490 66.667 0.00 0.00 0.00 2.40
5430 9375 4.929707 CGCACCCCGGCCCTATTC 62.930 72.222 0.00 0.00 0.00 1.75
5447 9392 1.975363 GAGTTGACGCTGCATCTGGC 61.975 60.000 0.00 0.00 45.13 4.85
5448 9393 0.390866 AGAGTTGACGCTGCATCTGG 60.391 55.000 0.00 0.00 0.00 3.86
5449 9394 0.997932 GAGAGTTGACGCTGCATCTG 59.002 55.000 0.00 0.00 0.00 2.90
5450 9395 0.457509 CGAGAGTTGACGCTGCATCT 60.458 55.000 0.00 0.00 0.00 2.90
5451 9396 0.456824 TCGAGAGTTGACGCTGCATC 60.457 55.000 0.00 0.00 0.00 3.91
5452 9397 0.734253 GTCGAGAGTTGACGCTGCAT 60.734 55.000 0.00 0.00 0.00 3.96
5453 9398 1.371758 GTCGAGAGTTGACGCTGCA 60.372 57.895 0.00 0.00 0.00 4.41
5454 9399 3.453465 GTCGAGAGTTGACGCTGC 58.547 61.111 0.00 0.00 0.00 5.25
5459 9404 1.069159 TCTTCAGCGTCGAGAGTTGAC 60.069 52.381 6.83 0.00 0.00 3.18
5460 9405 1.235724 TCTTCAGCGTCGAGAGTTGA 58.764 50.000 0.00 3.77 0.00 3.18
5461 9406 1.982223 CTTCTTCAGCGTCGAGAGTTG 59.018 52.381 0.00 0.00 0.00 3.16
5462 9407 1.880675 TCTTCTTCAGCGTCGAGAGTT 59.119 47.619 0.00 0.00 0.00 3.01
5463 9408 1.524848 TCTTCTTCAGCGTCGAGAGT 58.475 50.000 0.00 0.00 0.00 3.24
5464 9409 2.514902 CTTCTTCTTCAGCGTCGAGAG 58.485 52.381 0.00 0.00 0.00 3.20
5465 9410 1.200252 CCTTCTTCTTCAGCGTCGAGA 59.800 52.381 0.00 0.00 0.00 4.04
5466 9411 1.623359 CCTTCTTCTTCAGCGTCGAG 58.377 55.000 0.00 0.00 0.00 4.04
5467 9412 0.243907 CCCTTCTTCTTCAGCGTCGA 59.756 55.000 0.00 0.00 0.00 4.20
5468 9413 0.038159 ACCCTTCTTCTTCAGCGTCG 60.038 55.000 0.00 0.00 0.00 5.12
5469 9414 2.171341 AACCCTTCTTCTTCAGCGTC 57.829 50.000 0.00 0.00 0.00 5.19
5470 9415 2.158813 TGAAACCCTTCTTCTTCAGCGT 60.159 45.455 0.00 0.00 32.33 5.07
5471 9416 2.224314 GTGAAACCCTTCTTCTTCAGCG 59.776 50.000 0.00 0.00 32.33 5.18
5472 9417 3.214328 TGTGAAACCCTTCTTCTTCAGC 58.786 45.455 0.00 0.00 34.36 4.26
5473 9418 4.640201 TGTTGTGAAACCCTTCTTCTTCAG 59.360 41.667 0.00 0.00 34.36 3.02
5474 9419 4.594970 TGTTGTGAAACCCTTCTTCTTCA 58.405 39.130 0.00 0.00 34.36 3.02
5475 9420 5.299279 TCATGTTGTGAAACCCTTCTTCTTC 59.701 40.000 0.00 0.00 34.36 2.87
5476 9421 5.200483 TCATGTTGTGAAACCCTTCTTCTT 58.800 37.500 0.00 0.00 34.36 2.52
5477 9422 4.792068 TCATGTTGTGAAACCCTTCTTCT 58.208 39.130 0.00 0.00 34.36 2.85
5478 9423 5.507985 CCTTCATGTTGTGAAACCCTTCTTC 60.508 44.000 0.00 0.00 45.74 2.87
5479 9424 4.342092 CCTTCATGTTGTGAAACCCTTCTT 59.658 41.667 0.00 0.00 45.74 2.52
5480 9425 3.891366 CCTTCATGTTGTGAAACCCTTCT 59.109 43.478 0.00 0.00 45.74 2.85
5481 9426 3.005791 CCCTTCATGTTGTGAAACCCTTC 59.994 47.826 0.00 0.00 45.74 3.46
5482 9427 2.965147 CCCTTCATGTTGTGAAACCCTT 59.035 45.455 0.00 0.00 45.74 3.95
5483 9428 2.091333 ACCCTTCATGTTGTGAAACCCT 60.091 45.455 0.00 0.00 45.74 4.34
5484 9429 2.316108 ACCCTTCATGTTGTGAAACCC 58.684 47.619 0.00 0.00 45.74 4.11
5485 9430 4.368315 GAAACCCTTCATGTTGTGAAACC 58.632 43.478 0.00 0.00 45.74 3.27
5486 9431 4.041723 CGAAACCCTTCATGTTGTGAAAC 58.958 43.478 0.00 0.00 45.74 2.78
5487 9432 3.490078 GCGAAACCCTTCATGTTGTGAAA 60.490 43.478 0.00 0.00 45.74 2.69
5488 9433 2.034053 GCGAAACCCTTCATGTTGTGAA 59.966 45.455 0.00 0.00 44.36 3.18
5489 9434 1.606668 GCGAAACCCTTCATGTTGTGA 59.393 47.619 0.00 0.00 34.25 3.58
5490 9435 1.662876 CGCGAAACCCTTCATGTTGTG 60.663 52.381 0.00 0.00 0.00 3.33
5491 9436 0.591170 CGCGAAACCCTTCATGTTGT 59.409 50.000 0.00 0.00 0.00 3.32
5492 9437 0.109781 CCGCGAAACCCTTCATGTTG 60.110 55.000 8.23 0.00 0.00 3.33
5493 9438 0.250553 TCCGCGAAACCCTTCATGTT 60.251 50.000 8.23 0.00 0.00 2.71
5494 9439 0.953960 GTCCGCGAAACCCTTCATGT 60.954 55.000 8.23 0.00 0.00 3.21
5495 9440 1.794222 GTCCGCGAAACCCTTCATG 59.206 57.895 8.23 0.00 0.00 3.07
5496 9441 1.740296 CGTCCGCGAAACCCTTCAT 60.740 57.895 8.23 0.00 41.33 2.57
5497 9442 2.356553 CGTCCGCGAAACCCTTCA 60.357 61.111 8.23 0.00 41.33 3.02
5498 9443 3.785499 GCGTCCGCGAAACCCTTC 61.785 66.667 8.23 0.00 41.33 3.46
5502 9447 4.160635 CATGGCGTCCGCGAAACC 62.161 66.667 8.23 3.77 43.06 3.27
5503 9448 4.160635 CCATGGCGTCCGCGAAAC 62.161 66.667 8.23 4.32 43.06 2.78
5523 9468 3.775654 GAGAGGCGACCCCACCTG 61.776 72.222 0.00 0.00 36.05 4.00
5524 9469 3.966930 GAGAGAGGCGACCCCACCT 62.967 68.421 0.00 0.00 39.65 4.00
5525 9470 3.462678 GAGAGAGGCGACCCCACC 61.463 72.222 0.00 0.00 35.39 4.61
5526 9471 3.462678 GGAGAGAGGCGACCCCAC 61.463 72.222 0.00 0.00 35.39 4.61
5528 9473 4.816984 TCGGAGAGAGGCGACCCC 62.817 72.222 0.00 0.00 0.00 4.95
5529 9474 2.519780 ATCGGAGAGAGGCGACCC 60.520 66.667 0.00 0.00 43.63 4.46
5530 9475 1.175983 ATCATCGGAGAGAGGCGACC 61.176 60.000 0.00 0.00 43.63 4.79
5531 9476 0.039617 CATCATCGGAGAGAGGCGAC 60.040 60.000 0.00 0.00 43.63 5.19
5532 9477 0.179018 TCATCATCGGAGAGAGGCGA 60.179 55.000 0.00 0.00 43.63 5.54
5533 9478 0.240678 CTCATCATCGGAGAGAGGCG 59.759 60.000 0.00 0.00 43.63 5.52
5534 9479 0.602562 CCTCATCATCGGAGAGAGGC 59.397 60.000 0.00 0.00 43.63 4.70
5535 9480 1.612950 CACCTCATCATCGGAGAGAGG 59.387 57.143 13.12 13.12 46.70 3.69
5536 9481 2.580962 TCACCTCATCATCGGAGAGAG 58.419 52.381 0.00 0.00 43.63 3.20
5537 9482 2.736670 TCACCTCATCATCGGAGAGA 57.263 50.000 0.00 0.00 43.63 3.10
5538 9483 2.095314 CGATCACCTCATCATCGGAGAG 60.095 54.545 0.00 0.00 43.63 3.20
5539 9484 1.882623 CGATCACCTCATCATCGGAGA 59.117 52.381 0.00 0.00 45.75 3.71
5540 9485 1.882623 TCGATCACCTCATCATCGGAG 59.117 52.381 0.00 0.00 39.90 4.63
5541 9486 1.609072 GTCGATCACCTCATCATCGGA 59.391 52.381 0.00 0.00 39.90 4.55
5542 9487 1.611006 AGTCGATCACCTCATCATCGG 59.389 52.381 0.00 0.00 39.90 4.18
5543 9488 3.251004 TGTAGTCGATCACCTCATCATCG 59.749 47.826 0.00 0.00 40.66 3.84
5544 9489 4.793071 CTGTAGTCGATCACCTCATCATC 58.207 47.826 0.00 0.00 0.00 2.92
5545 9490 3.005261 GCTGTAGTCGATCACCTCATCAT 59.995 47.826 0.00 0.00 0.00 2.45
5546 9491 2.359214 GCTGTAGTCGATCACCTCATCA 59.641 50.000 0.00 0.00 0.00 3.07
5547 9492 2.603412 CGCTGTAGTCGATCACCTCATC 60.603 54.545 0.00 0.00 0.00 2.92
5548 9493 1.335182 CGCTGTAGTCGATCACCTCAT 59.665 52.381 0.00 0.00 0.00 2.90
5549 9494 0.733150 CGCTGTAGTCGATCACCTCA 59.267 55.000 0.00 0.00 0.00 3.86
5550 9495 0.733729 ACGCTGTAGTCGATCACCTC 59.266 55.000 0.00 0.00 0.00 3.85
5551 9496 0.733729 GACGCTGTAGTCGATCACCT 59.266 55.000 0.00 0.00 0.00 4.00
5552 9497 3.237522 GACGCTGTAGTCGATCACC 57.762 57.895 0.00 0.00 0.00 4.02
5559 9504 1.225963 GACCGACGACGCTGTAGTC 60.226 63.158 0.64 10.30 35.42 2.59
5560 9505 1.633852 GAGACCGACGACGCTGTAGT 61.634 60.000 0.64 0.00 38.29 2.73
5561 9506 1.060622 GAGACCGACGACGCTGTAG 59.939 63.158 0.64 0.00 38.29 2.74
5562 9507 2.733671 CGAGACCGACGACGCTGTA 61.734 63.158 0.64 0.00 38.22 2.74
5563 9508 4.086178 CGAGACCGACGACGCTGT 62.086 66.667 0.64 0.00 38.22 4.40
5564 9509 4.813526 CCGAGACCGACGACGCTG 62.814 72.222 0.64 0.00 38.22 5.18
5571 9516 3.827898 CTGAGGCCCGAGACCGAC 61.828 72.222 0.00 0.00 38.22 4.79
5572 9517 2.975265 TACTGAGGCCCGAGACCGA 61.975 63.158 0.00 0.00 38.22 4.69
5573 9518 2.439701 TACTGAGGCCCGAGACCG 60.440 66.667 0.00 0.00 0.00 4.79
5574 9519 2.772691 CGTACTGAGGCCCGAGACC 61.773 68.421 0.00 0.00 0.00 3.85
5575 9520 1.748122 TCGTACTGAGGCCCGAGAC 60.748 63.158 0.00 0.00 0.00 3.36
5576 9521 2.672908 TCGTACTGAGGCCCGAGA 59.327 61.111 0.00 0.00 0.00 4.04
5577 9522 3.111939 CTCGTACTGAGGCCCGAG 58.888 66.667 11.59 11.59 41.29 4.63


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.