Multiple sequence alignment - TraesCS4B01G004800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G004800 chr4B 100.000 7168 0 0 1 7168 3343340 3336173 0.000000e+00 13237.0
1 TraesCS4B01G004800 chr4B 86.431 1695 212 10 3152 4831 3733776 3735467 0.000000e+00 1840.0
2 TraesCS4B01G004800 chr4B 87.928 1226 107 20 5689 6907 3735475 3736666 0.000000e+00 1406.0
3 TraesCS4B01G004800 chr4B 85.390 1232 169 10 829 2054 3732275 3733501 0.000000e+00 1267.0
4 TraesCS4B01G004800 chr4B 84.211 1216 182 9 832 2042 3484391 3483181 0.000000e+00 1173.0
5 TraesCS4B01G004800 chr4B 84.211 1216 183 8 832 2042 3514365 3513154 0.000000e+00 1173.0
6 TraesCS4B01G004800 chr4B 85.125 1116 157 8 832 1942 3454277 3453166 0.000000e+00 1133.0
7 TraesCS4B01G004800 chr4B 83.402 970 159 2 1074 2042 3431599 3430631 0.000000e+00 898.0
8 TraesCS4B01G004800 chr4B 83.514 461 48 15 1 460 3433478 3433045 8.660000e-109 405.0
9 TraesCS4B01G004800 chr4B 83.514 461 48 15 1 460 3455847 3455414 8.660000e-109 405.0
10 TraesCS4B01G004800 chr4B 83.514 461 48 15 1 460 3485961 3485528 8.660000e-109 405.0
11 TraesCS4B01G004800 chr4B 83.514 461 48 15 1 460 3515935 3515502 8.660000e-109 405.0
12 TraesCS4B01G004800 chr4B 97.959 49 1 0 7020 7068 3336275 3336227 1.280000e-12 86.1
13 TraesCS4B01G004800 chr4B 97.959 49 1 0 7066 7114 3336321 3336273 1.280000e-12 86.1
14 TraesCS4B01G004800 chr4D 92.475 2485 163 15 2373 4836 1873903 1876384 0.000000e+00 3531.0
15 TraesCS4B01G004800 chr4D 90.332 2348 153 15 70 2378 1871553 1873865 0.000000e+00 3011.0
16 TraesCS4B01G004800 chr4D 85.764 2030 187 30 70 2057 1821039 1823008 0.000000e+00 2054.0
17 TraesCS4B01G004800 chr4D 85.292 1693 231 13 3156 4836 1823276 1824962 0.000000e+00 1731.0
18 TraesCS4B01G004800 chr4D 85.253 712 72 15 5689 6369 1876387 1877096 0.000000e+00 702.0
19 TraesCS4B01G004800 chr4D 84.728 681 73 16 5689 6339 1824965 1825644 0.000000e+00 652.0
20 TraesCS4B01G004800 chr4A 93.155 2352 134 6 2490 4836 602872306 602874635 0.000000e+00 3426.0
21 TraesCS4B01G004800 chr4A 88.739 2442 235 24 2373 4797 602609017 602611435 0.000000e+00 2950.0
22 TraesCS4B01G004800 chr4A 92.165 1238 96 1 829 2066 602870639 602871875 0.000000e+00 1748.0
23 TraesCS4B01G004800 chr4A 96.774 806 23 2 4839 5641 660228554 660229359 0.000000e+00 1341.0
24 TraesCS4B01G004800 chr4A 95.272 846 32 8 4839 5679 660625980 660626822 0.000000e+00 1334.0
25 TraesCS4B01G004800 chr4A 90.011 931 90 1 3609 4539 602726157 602727084 0.000000e+00 1201.0
26 TraesCS4B01G004800 chr4A 90.650 492 45 1 5689 6179 602874638 602875129 0.000000e+00 652.0
27 TraesCS4B01G004800 chr4A 85.486 627 62 17 5689 6286 602611462 602612088 1.700000e-175 627.0
28 TraesCS4B01G004800 chr4A 88.553 463 51 2 4375 4836 602722336 602722797 1.750000e-155 560.0
29 TraesCS4B01G004800 chr4A 97.516 322 8 0 2057 2378 602871894 602872215 1.050000e-152 551.0
30 TraesCS4B01G004800 chr4A 86.475 451 54 6 5689 6134 602722800 602723248 8.360000e-134 488.0
31 TraesCS4B01G004800 chr4A 84.519 478 57 8 5733 6209 602725316 602725777 2.360000e-124 457.0
32 TraesCS4B01G004800 chr4A 87.234 94 12 0 6207 6300 602875331 602875424 2.730000e-19 108.0
33 TraesCS4B01G004800 chr4A 98.333 60 1 0 2373 2432 602872253 602872312 9.830000e-19 106.0
34 TraesCS4B01G004800 chrUn 89.391 2479 234 14 2373 4836 47659480 47661944 0.000000e+00 3094.0
35 TraesCS4B01G004800 chrUn 87.211 1689 204 8 3152 4831 47452162 47453847 0.000000e+00 1912.0
36 TraesCS4B01G004800 chrUn 87.013 1694 203 11 3152 4832 47631561 47633250 0.000000e+00 1893.0
37 TraesCS4B01G004800 chrUn 90.799 1152 97 4 1223 2366 47658280 47659430 0.000000e+00 1531.0
38 TraesCS4B01G004800 chrUn 85.356 1236 166 14 829 2057 47630062 47631289 0.000000e+00 1266.0
39 TraesCS4B01G004800 chrUn 84.331 1219 182 8 829 2042 48044712 48045926 0.000000e+00 1184.0
40 TraesCS4B01G004800 chrUn 84.249 1219 183 8 829 2042 48074983 48076197 0.000000e+00 1179.0
41 TraesCS4B01G004800 chrUn 93.208 795 51 3 4887 5679 105267948 105268741 0.000000e+00 1166.0
42 TraesCS4B01G004800 chrUn 91.748 824 65 3 4839 5661 371704828 371705649 0.000000e+00 1142.0
43 TraesCS4B01G004800 chrUn 83.400 1241 180 14 822 2057 47450671 47451890 0.000000e+00 1127.0
44 TraesCS4B01G004800 chrUn 85.204 784 76 16 5689 6466 47633257 47634006 0.000000e+00 769.0
45 TraesCS4B01G004800 chrUn 87.429 525 62 2 5689 6212 47453855 47454376 1.030000e-167 601.0
46 TraesCS4B01G004800 chrUn 93.367 392 22 1 6498 6889 47634011 47634398 1.730000e-160 577.0
47 TraesCS4B01G004800 chrUn 83.514 461 48 15 1 460 48043137 48043570 8.660000e-109 405.0
48 TraesCS4B01G004800 chrUn 83.297 461 49 15 1 460 48073408 48073841 4.030000e-107 399.0
49 TraesCS4B01G004800 chrUn 83.297 461 49 15 1 460 403973530 403973097 4.030000e-107 399.0
50 TraesCS4B01G004800 chrUn 91.579 190 16 0 6876 7065 47644744 47644933 5.510000e-66 263.0
51 TraesCS4B01G004800 chrUn 87.560 209 19 4 605 811 47629791 47629994 1.200000e-57 235.0
52 TraesCS4B01G004800 chrUn 97.196 107 3 0 7062 7168 47644884 47644990 1.590000e-41 182.0
53 TraesCS4B01G004800 chrUn 82.550 149 19 5 1 148 449893345 449893203 2.720000e-24 124.0
54 TraesCS4B01G004800 chr7B 95.346 838 39 0 4842 5679 717543896 717543059 0.000000e+00 1332.0
55 TraesCS4B01G004800 chr6B 93.675 838 40 1 4842 5679 19357788 19356964 0.000000e+00 1242.0
56 TraesCS4B01G004800 chr3D 93.230 842 55 2 4839 5679 566644592 566645432 0.000000e+00 1238.0
57 TraesCS4B01G004800 chr3B 92.363 838 39 5 4842 5679 685100535 685099723 0.000000e+00 1170.0
58 TraesCS4B01G004800 chr3B 92.991 642 40 1 5038 5679 823875877 823876513 0.000000e+00 931.0
59 TraesCS4B01G004800 chr3B 95.510 245 11 0 5435 5679 30380560 30380804 6.740000e-105 392.0
60 TraesCS4B01G004800 chr7A 94.948 574 29 0 4842 5415 22535539 22534966 0.000000e+00 900.0
61 TraesCS4B01G004800 chr2A 90.202 347 30 4 4839 5185 52548789 52549131 3.940000e-122 449.0
62 TraesCS4B01G004800 chr1D 90.492 305 16 3 3551 3855 386257569 386257860 2.420000e-104 390.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G004800 chr4B 3336173 3343340 7167 True 13237.000000 13237 100.000000 1 7168 1 chr4B.!!$R1 7167
1 TraesCS4B01G004800 chr4B 3732275 3736666 4391 False 1504.333333 1840 86.583000 829 6907 3 chr4B.!!$F1 6078
2 TraesCS4B01G004800 chr4B 3483181 3485961 2780 True 789.000000 1173 83.862500 1 2042 2 chr4B.!!$R5 2041
3 TraesCS4B01G004800 chr4B 3513154 3515935 2781 True 789.000000 1173 83.862500 1 2042 2 chr4B.!!$R6 2041
4 TraesCS4B01G004800 chr4B 3453166 3455847 2681 True 769.000000 1133 84.319500 1 1942 2 chr4B.!!$R4 1941
5 TraesCS4B01G004800 chr4B 3430631 3433478 2847 True 651.500000 898 83.458000 1 2042 2 chr4B.!!$R3 2041
6 TraesCS4B01G004800 chr4D 1871553 1877096 5543 False 2414.666667 3531 89.353333 70 6369 3 chr4D.!!$F2 6299
7 TraesCS4B01G004800 chr4D 1821039 1825644 4605 False 1479.000000 2054 85.261333 70 6339 3 chr4D.!!$F1 6269
8 TraesCS4B01G004800 chr4A 602609017 602612088 3071 False 1788.500000 2950 87.112500 2373 6286 2 chr4A.!!$F3 3913
9 TraesCS4B01G004800 chr4A 660228554 660229359 805 False 1341.000000 1341 96.774000 4839 5641 1 chr4A.!!$F1 802
10 TraesCS4B01G004800 chr4A 660625980 660626822 842 False 1334.000000 1334 95.272000 4839 5679 1 chr4A.!!$F2 840
11 TraesCS4B01G004800 chr4A 602870639 602875424 4785 False 1098.500000 3426 93.175500 829 6300 6 chr4A.!!$F5 5471
12 TraesCS4B01G004800 chr4A 602722336 602727084 4748 False 676.500000 1201 87.389500 3609 6209 4 chr4A.!!$F4 2600
13 TraesCS4B01G004800 chrUn 47658280 47661944 3664 False 2312.500000 3094 90.095000 1223 4836 2 chrUn.!!$F6 3613
14 TraesCS4B01G004800 chrUn 47450671 47454376 3705 False 1213.333333 1912 86.013333 822 6212 3 chrUn.!!$F3 5390
15 TraesCS4B01G004800 chrUn 105267948 105268741 793 False 1166.000000 1166 93.208000 4887 5679 1 chrUn.!!$F1 792
16 TraesCS4B01G004800 chrUn 371704828 371705649 821 False 1142.000000 1142 91.748000 4839 5661 1 chrUn.!!$F2 822
17 TraesCS4B01G004800 chrUn 47629791 47634398 4607 False 948.000000 1893 87.700000 605 6889 5 chrUn.!!$F4 6284
18 TraesCS4B01G004800 chrUn 48043137 48045926 2789 False 794.500000 1184 83.922500 1 2042 2 chrUn.!!$F7 2041
19 TraesCS4B01G004800 chrUn 48073408 48076197 2789 False 789.000000 1179 83.773000 1 2042 2 chrUn.!!$F8 2041
20 TraesCS4B01G004800 chr7B 717543059 717543896 837 True 1332.000000 1332 95.346000 4842 5679 1 chr7B.!!$R1 837
21 TraesCS4B01G004800 chr6B 19356964 19357788 824 True 1242.000000 1242 93.675000 4842 5679 1 chr6B.!!$R1 837
22 TraesCS4B01G004800 chr3D 566644592 566645432 840 False 1238.000000 1238 93.230000 4839 5679 1 chr3D.!!$F1 840
23 TraesCS4B01G004800 chr3B 685099723 685100535 812 True 1170.000000 1170 92.363000 4842 5679 1 chr3B.!!$R1 837
24 TraesCS4B01G004800 chr3B 823875877 823876513 636 False 931.000000 931 92.991000 5038 5679 1 chr3B.!!$F2 641
25 TraesCS4B01G004800 chr7A 22534966 22535539 573 True 900.000000 900 94.948000 4842 5415 1 chr7A.!!$R1 573

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
623 700 0.984995 GAACCCTGCACCTACTTCCT 59.015 55.000 0.0 0.0 0.00 3.36 F
627 704 2.035632 CCCTGCACCTACTTCCTAGAG 58.964 57.143 0.0 0.0 0.00 2.43 F
1509 2391 0.107410 AGTCAGGTGTTGTTGGCGAA 60.107 50.000 0.0 0.0 0.00 4.70 F
1587 2469 0.973632 ACAAGACTGGTCGCCACATA 59.026 50.000 0.0 0.0 34.09 2.29 F
1987 2872 2.516695 CTGCACACTGCCACCACA 60.517 61.111 0.0 0.0 44.23 4.17 F
3454 4476 3.525268 AAACCCAAAAAGTCTGTGCTG 57.475 42.857 0.0 0.0 0.00 4.41 F
4836 5871 0.037303 ATGCCTCCAGGACTTGTGTG 59.963 55.000 0.0 0.0 37.39 3.82 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1490 2372 0.107410 TTCGCCAACAACACCTGACT 60.107 50.000 0.00 0.0 0.00 3.41 R
1520 2402 0.249447 CACGAGTGCTCTTGTGTCCA 60.249 55.000 22.67 0.0 45.86 4.02 R
2806 3805 3.170717 TGACCCAAGTCCGAAGATAACT 58.829 45.455 0.00 0.0 42.81 2.24 R
3184 4203 4.019411 TCCTTTAGCACATCAACCTCATGA 60.019 41.667 0.00 0.0 0.00 3.07 R
3825 4851 1.081892 CAACGAATCACCAGGCTGAG 58.918 55.000 17.94 8.8 0.00 3.35 R
4975 6011 0.389948 CAGTCGGCTCGGTTAAAGCT 60.390 55.000 0.00 0.0 39.75 3.74 R
6489 7727 0.035439 AGTAGTCGGGGGTTTGCATG 60.035 55.000 0.00 0.0 0.00 4.06 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
37 38 6.273071 GGCAGTTGACTAATTTCTTGTTGTT 58.727 36.000 0.00 0.00 0.00 2.83
197 198 3.726517 CCCGTTGGAGCGCTTGTG 61.727 66.667 13.26 0.00 0.00 3.33
208 209 2.514824 GCTTGTGGCTCCCCGATC 60.515 66.667 0.00 0.00 38.06 3.69
209 210 2.202932 CTTGTGGCTCCCCGATCG 60.203 66.667 8.51 8.51 0.00 3.69
210 211 2.682136 TTGTGGCTCCCCGATCGA 60.682 61.111 18.66 0.00 0.00 3.59
211 212 2.032860 CTTGTGGCTCCCCGATCGAT 62.033 60.000 18.66 0.00 0.00 3.59
224 253 3.282885 CCGATCGATCTGGATCTGGATA 58.717 50.000 23.47 0.00 40.52 2.59
228 257 4.576330 TCGATCTGGATCTGGATAGCTA 57.424 45.455 0.00 0.00 35.72 3.32
229 258 4.522114 TCGATCTGGATCTGGATAGCTAG 58.478 47.826 0.00 0.00 35.72 3.42
232 261 4.936685 TCTGGATCTGGATAGCTAGCTA 57.063 45.455 26.09 26.09 0.00 3.32
233 262 4.594970 TCTGGATCTGGATAGCTAGCTAC 58.405 47.826 26.41 18.55 0.00 3.58
235 264 4.339748 TGGATCTGGATAGCTAGCTACAG 58.660 47.826 26.41 26.02 0.00 2.74
237 266 5.014228 TGGATCTGGATAGCTAGCTACAGTA 59.986 44.000 28.25 20.14 29.86 2.74
240 269 6.683312 TCTGGATAGCTAGCTACAGTAGTA 57.317 41.667 28.25 15.23 29.86 1.82
242 271 5.236282 TGGATAGCTAGCTACAGTAGTACG 58.764 45.833 26.41 0.00 0.00 3.67
245 274 4.405116 AGCTAGCTACAGTAGTACGACT 57.595 45.455 17.69 2.38 0.00 4.18
336 369 5.505165 TCAACGTAATTAACTCAACTCGC 57.495 39.130 0.00 0.00 0.00 5.03
436 469 5.218885 TGTTGGCGTTTGTTCAAGATAATG 58.781 37.500 0.00 0.00 0.00 1.90
496 529 2.969443 CGTAGCCACAGTTTTCCTTG 57.031 50.000 0.00 0.00 0.00 3.61
516 569 5.990386 CCTTGAGATGAGTGAATCTGGTATG 59.010 44.000 0.00 0.00 37.03 2.39
559 636 6.459848 CCCTAACTTGTAATACAGAGGACTCG 60.460 46.154 11.76 0.00 34.09 4.18
571 648 3.184581 CAGAGGACTCGTTTTAACTGCAC 59.815 47.826 0.00 0.00 34.09 4.57
621 698 1.019805 GCGAACCCTGCACCTACTTC 61.020 60.000 0.00 0.00 0.00 3.01
623 700 0.984995 GAACCCTGCACCTACTTCCT 59.015 55.000 0.00 0.00 0.00 3.36
627 704 2.035632 CCCTGCACCTACTTCCTAGAG 58.964 57.143 0.00 0.00 0.00 2.43
772 1549 5.869888 GCTATCTTTCTCTCTTTGAAACCGA 59.130 40.000 0.00 0.00 31.21 4.69
784 1561 2.083774 TGAAACCGATGATCTTGTGCC 58.916 47.619 0.00 0.00 0.00 5.01
788 1565 2.795329 ACCGATGATCTTGTGCCTTTT 58.205 42.857 0.00 0.00 0.00 2.27
861 1692 4.164221 CCCTTGGGATTTCTTGCTAGTCTA 59.836 45.833 0.00 0.00 0.00 2.59
1441 2323 3.008485 AGAAGCCTACCAAGACTTGAAGG 59.992 47.826 22.73 22.73 36.96 3.46
1443 2325 2.711547 AGCCTACCAAGACTTGAAGGTT 59.288 45.455 25.35 20.72 36.54 3.50
1452 2334 5.470368 CAAGACTTGAAGGTTACTCGATCA 58.530 41.667 9.76 0.00 0.00 2.92
1509 2391 0.107410 AGTCAGGTGTTGTTGGCGAA 60.107 50.000 0.00 0.00 0.00 4.70
1520 2402 2.582052 TGTTGGCGAAAAGATTGAGGT 58.418 42.857 0.00 0.00 0.00 3.85
1559 2441 1.339151 GGAGGTGCTTACAAGTGAGGG 60.339 57.143 0.00 0.00 0.00 4.30
1587 2469 0.973632 ACAAGACTGGTCGCCACATA 59.026 50.000 0.00 0.00 34.09 2.29
1663 2545 3.385577 GTCTTCAATGACGAGGCTATCC 58.614 50.000 0.00 0.00 0.00 2.59
1713 2595 3.144657 AGCATCACACAGGATTTCACA 57.855 42.857 0.00 0.00 0.00 3.58
1715 2597 2.816087 GCATCACACAGGATTTCACAGT 59.184 45.455 0.00 0.00 0.00 3.55
1987 2872 2.516695 CTGCACACTGCCACCACA 60.517 61.111 0.00 0.00 44.23 4.17
2575 3543 3.684788 CAGGACCGTGTCAAATCCTAAAG 59.315 47.826 6.41 0.00 39.66 1.85
3121 4136 5.163814 GCTGATCACCACTTTCAGATGTTAC 60.164 44.000 3.47 0.00 39.36 2.50
3184 4203 4.054359 ACTCACTACAGAGGAGAATGGT 57.946 45.455 0.00 0.00 39.97 3.55
3454 4476 3.525268 AAACCCAAAAAGTCTGTGCTG 57.475 42.857 0.00 0.00 0.00 4.41
3846 4872 1.081892 CAGCCTGGTGATTCGTTGAG 58.918 55.000 0.00 0.00 0.00 3.02
3878 4904 6.294787 CCCAAGTCTACGTCTTCTGCATATAT 60.295 42.308 0.00 0.00 0.00 0.86
4029 5055 7.631377 GCATATTAGCCTTGAAGGTTGTGAAAT 60.631 37.037 13.58 6.11 37.80 2.17
4061 5087 8.267183 TGAAACTTCCTGATAGCATTATCAAGA 58.733 33.333 0.00 0.00 43.75 3.02
4089 5115 4.292306 AGGGTTGAGGTTCCTTGATATTGT 59.708 41.667 0.00 0.00 0.00 2.71
4135 5161 0.107800 GGGGTTTCCGAGCTCTTACC 60.108 60.000 12.85 12.56 0.00 2.85
4150 5176 4.636206 GCTCTTACCAATTTGAGGGTACTG 59.364 45.833 0.00 0.00 39.29 2.74
4151 5177 5.570844 GCTCTTACCAATTTGAGGGTACTGA 60.571 44.000 0.00 0.00 39.29 3.41
4190 5216 7.232737 CCTATATTGATGGTGACTGGTGTAGTA 59.767 40.741 0.00 0.00 40.53 1.82
4213 5239 1.073923 GAAGAGTTGGGGCCTCTTTCA 59.926 52.381 3.07 0.00 46.54 2.69
4235 5261 6.233434 TCACAGCTCAATTGTCTTTCACTAT 58.767 36.000 5.13 0.00 0.00 2.12
4238 5264 5.413833 CAGCTCAATTGTCTTTCACTATGGT 59.586 40.000 5.13 0.00 0.00 3.55
4244 5270 7.602644 TCAATTGTCTTTCACTATGGTGTCTAC 59.397 37.037 9.23 4.80 43.41 2.59
4279 5305 1.662446 CTTGTTGGCTGCAAAGGCG 60.662 57.895 0.50 0.00 45.35 5.52
4290 5316 1.271652 TGCAAAGGCGAGGGTAAATGA 60.272 47.619 0.00 0.00 45.35 2.57
4295 5321 2.723273 AGGCGAGGGTAAATGAAAAGG 58.277 47.619 0.00 0.00 0.00 3.11
4314 5340 8.536175 TGAAAAGGAAAATCTTACCAAACTTGT 58.464 29.630 0.00 0.00 0.00 3.16
4358 5384 1.566231 GAGATGGGTTGGTCCAAGGAT 59.434 52.381 3.96 0.00 40.62 3.24
4359 5385 1.566231 AGATGGGTTGGTCCAAGGATC 59.434 52.381 3.96 6.91 40.62 3.36
4367 5393 3.757947 TGGTCCAAGGATCAGTCTCTA 57.242 47.619 0.00 0.00 30.86 2.43
4372 5398 4.707448 GTCCAAGGATCAGTCTCTAAGTCA 59.293 45.833 0.00 0.00 0.00 3.41
4534 5563 5.568685 TGAAGATTCTAGTCCTCGAACAG 57.431 43.478 0.00 0.00 0.00 3.16
4642 5671 2.032030 GTGTGTTGGTCCTGAATTCGTG 60.032 50.000 0.04 0.00 0.00 4.35
4660 5689 2.159787 CGTGCAACAGTACAATCAGCTC 60.160 50.000 0.00 0.00 35.74 4.09
4664 5693 2.370281 ACAGTACAATCAGCTCCACG 57.630 50.000 0.00 0.00 0.00 4.94
4674 5703 0.824109 CAGCTCCACGGTCCTTCATA 59.176 55.000 0.00 0.00 0.00 2.15
4690 5725 4.445453 CTTCATATCAGTTGGCTGCTACA 58.555 43.478 0.00 0.00 42.29 2.74
4705 5740 4.019174 CTGCTACATTTCCCAAACTCCAT 58.981 43.478 0.00 0.00 0.00 3.41
4708 5743 5.417580 TGCTACATTTCCCAAACTCCATAAC 59.582 40.000 0.00 0.00 0.00 1.89
4712 5747 5.838521 ACATTTCCCAAACTCCATAACTTGT 59.161 36.000 0.00 0.00 0.00 3.16
4719 5754 7.175990 TCCCAAACTCCATAACTTGTATTTGTC 59.824 37.037 0.00 0.00 0.00 3.18
4727 5762 8.106462 TCCATAACTTGTATTTGTCTGGAATGA 58.894 33.333 0.00 0.00 30.28 2.57
4836 5871 0.037303 ATGCCTCCAGGACTTGTGTG 59.963 55.000 0.00 0.00 37.39 3.82
4837 5872 1.053835 TGCCTCCAGGACTTGTGTGA 61.054 55.000 0.00 0.00 37.39 3.58
4840 5875 1.349026 CCTCCAGGACTTGTGTGACAT 59.651 52.381 0.00 0.00 37.39 3.06
4953 5989 2.598394 GCTCAGCAAACCAGCCCA 60.598 61.111 0.00 0.00 34.23 5.36
4993 6029 0.108756 GAGCTTTAACCGAGCCGACT 60.109 55.000 0.00 0.00 41.03 4.18
5455 6502 1.074926 ATCTCCATGACGAGCCCCT 60.075 57.895 0.00 0.00 0.00 4.79
5523 6570 3.692406 GTGAACTCCGGCCGGTCT 61.692 66.667 41.57 27.22 36.47 3.85
5687 6734 0.872388 GACCGTGTCCAAATGTCACC 59.128 55.000 0.00 0.00 0.00 4.02
5712 6759 3.057315 TGCAATGGCTTTGAAGAAGCTAC 60.057 43.478 16.43 0.00 42.62 3.58
5742 6789 2.040178 ACGTCCAAGTTCTCCACTCTT 58.960 47.619 0.00 0.00 32.94 2.85
5909 6956 0.891373 TCGAGCTGAGAGTTTCCAGG 59.109 55.000 0.00 0.00 0.00 4.45
5929 6976 0.850100 TGGGAAAGCCAACTTCCAGA 59.150 50.000 4.14 0.00 34.05 3.86
5930 6977 1.428912 TGGGAAAGCCAACTTCCAGAT 59.571 47.619 4.14 0.00 34.05 2.90
5943 6990 5.499004 ACTTCCAGATTACCTGCAAACTA 57.501 39.130 0.00 0.00 41.57 2.24
6118 7165 2.234661 TCTACACATCTGAACCCTGCAG 59.765 50.000 6.78 6.78 34.71 4.41
6158 7209 7.921786 TCATCAGGTAATACTTTGGTCTTTG 57.078 36.000 0.00 0.00 0.00 2.77
6162 7214 7.284074 TCAGGTAATACTTTGGTCTTTGTTGA 58.716 34.615 0.00 0.00 0.00 3.18
6164 7218 8.023128 CAGGTAATACTTTGGTCTTTGTTGATG 58.977 37.037 0.00 0.00 0.00 3.07
6165 7219 7.724061 AGGTAATACTTTGGTCTTTGTTGATGT 59.276 33.333 0.00 0.00 0.00 3.06
6300 7529 1.026718 ATAGGGCGCAACTCAAGCAC 61.027 55.000 10.83 0.00 33.87 4.40
6314 7543 1.546923 CAAGCACAGCAATGAATGGGA 59.453 47.619 0.00 0.00 0.00 4.37
6379 7616 8.658499 TTCTAGTTTTGAGTACTCTTGGTTTC 57.342 34.615 23.01 7.83 0.00 2.78
6382 7619 7.555306 AGTTTTGAGTACTCTTGGTTTCTTC 57.445 36.000 23.01 4.03 0.00 2.87
6383 7620 7.110155 AGTTTTGAGTACTCTTGGTTTCTTCA 58.890 34.615 23.01 0.00 0.00 3.02
6469 7707 0.037447 AAGGCTGCCTCCACTTTCTC 59.963 55.000 23.61 0.00 30.89 2.87
6470 7708 1.377856 GGCTGCCTCCACTTTCTCC 60.378 63.158 12.43 0.00 0.00 3.71
6471 7709 1.682257 GCTGCCTCCACTTTCTCCT 59.318 57.895 0.00 0.00 0.00 3.69
6472 7710 0.905357 GCTGCCTCCACTTTCTCCTA 59.095 55.000 0.00 0.00 0.00 2.94
6473 7711 1.406205 GCTGCCTCCACTTTCTCCTAC 60.406 57.143 0.00 0.00 0.00 3.18
6474 7712 1.902508 CTGCCTCCACTTTCTCCTACA 59.097 52.381 0.00 0.00 0.00 2.74
6475 7713 1.902508 TGCCTCCACTTTCTCCTACAG 59.097 52.381 0.00 0.00 0.00 2.74
6476 7714 1.406205 GCCTCCACTTTCTCCTACAGC 60.406 57.143 0.00 0.00 0.00 4.40
6477 7715 2.183679 CCTCCACTTTCTCCTACAGCT 58.816 52.381 0.00 0.00 0.00 4.24
6478 7716 3.366396 CCTCCACTTTCTCCTACAGCTA 58.634 50.000 0.00 0.00 0.00 3.32
6479 7717 3.383185 CCTCCACTTTCTCCTACAGCTAG 59.617 52.174 0.00 0.00 0.00 3.42
6480 7718 4.020543 CTCCACTTTCTCCTACAGCTAGT 58.979 47.826 0.00 0.00 0.00 2.57
6481 7719 3.764434 TCCACTTTCTCCTACAGCTAGTG 59.236 47.826 1.31 1.31 35.00 2.74
6482 7720 3.764434 CCACTTTCTCCTACAGCTAGTGA 59.236 47.826 8.68 0.00 36.26 3.41
6483 7721 4.142271 CCACTTTCTCCTACAGCTAGTGAG 60.142 50.000 8.68 2.92 36.26 3.51
6484 7722 4.461081 CACTTTCTCCTACAGCTAGTGAGT 59.539 45.833 2.00 0.00 36.26 3.41
6485 7723 5.047660 CACTTTCTCCTACAGCTAGTGAGTT 60.048 44.000 2.00 0.00 36.26 3.01
6486 7724 5.047660 ACTTTCTCCTACAGCTAGTGAGTTG 60.048 44.000 0.00 0.00 39.66 3.16
6487 7725 3.357203 TCTCCTACAGCTAGTGAGTTGG 58.643 50.000 0.00 0.00 38.18 3.77
6488 7726 1.825474 TCCTACAGCTAGTGAGTTGGC 59.175 52.381 0.00 0.00 38.18 4.52
6489 7727 1.134670 CCTACAGCTAGTGAGTTGGCC 60.135 57.143 0.00 0.00 38.18 5.36
6490 7728 1.550524 CTACAGCTAGTGAGTTGGCCA 59.449 52.381 0.00 0.00 38.18 5.36
6491 7729 0.987294 ACAGCTAGTGAGTTGGCCAT 59.013 50.000 6.09 0.00 38.18 4.40
6492 7730 1.339438 ACAGCTAGTGAGTTGGCCATG 60.339 52.381 6.09 0.00 38.18 3.66
6493 7731 0.393537 AGCTAGTGAGTTGGCCATGC 60.394 55.000 6.09 2.32 0.00 4.06
6494 7732 0.677731 GCTAGTGAGTTGGCCATGCA 60.678 55.000 6.09 1.76 0.00 3.96
6495 7733 1.825090 CTAGTGAGTTGGCCATGCAA 58.175 50.000 6.09 0.00 0.00 4.08
6496 7734 2.161855 CTAGTGAGTTGGCCATGCAAA 58.838 47.619 6.09 0.00 0.00 3.68
6577 7843 2.159366 AGAGCTCGGTTCTAATGTCACG 60.159 50.000 8.37 0.00 0.00 4.35
6604 7870 9.653287 CTTGATATATAAGCGAGACCCATAAAA 57.347 33.333 0.00 0.00 0.00 1.52
6635 7901 3.055385 TCCAGGTAAATGGTAGTGCTGTC 60.055 47.826 0.00 0.00 41.43 3.51
6639 7905 4.943705 AGGTAAATGGTAGTGCTGTCATTG 59.056 41.667 0.00 0.00 31.20 2.82
6678 7944 9.014297 CAGGAAAATGGTATATCTTGTAATCCC 57.986 37.037 0.00 0.00 0.00 3.85
6692 7958 3.960755 TGTAATCCCGAGATGTGAGTCAT 59.039 43.478 0.00 0.00 39.77 3.06
6693 7959 4.405680 TGTAATCCCGAGATGTGAGTCATT 59.594 41.667 0.00 0.00 36.83 2.57
6748 8014 7.961326 AACATGACTTTATTAGGCTTGGAAT 57.039 32.000 0.00 0.00 40.51 3.01
6857 8123 7.009723 TCGTTTCAATTTGCCTACTTTTTCAAC 59.990 33.333 0.00 0.00 0.00 3.18
6897 8163 2.014128 CCTTGTCGTTGTCAGTTTGGT 58.986 47.619 0.00 0.00 0.00 3.67
6907 8173 2.173782 TGTCAGTTTGGTAAGGAAGCCA 59.826 45.455 0.00 0.00 0.00 4.75
6908 8174 2.552743 GTCAGTTTGGTAAGGAAGCCAC 59.447 50.000 0.00 0.00 34.02 5.01
6909 8175 2.441750 TCAGTTTGGTAAGGAAGCCACT 59.558 45.455 0.00 0.00 34.02 4.00
6910 8176 3.649023 TCAGTTTGGTAAGGAAGCCACTA 59.351 43.478 0.00 0.00 34.02 2.74
6911 8177 4.103469 TCAGTTTGGTAAGGAAGCCACTAA 59.897 41.667 0.00 0.00 34.02 2.24
6912 8178 4.455877 CAGTTTGGTAAGGAAGCCACTAAG 59.544 45.833 0.00 0.00 34.02 2.18
6913 8179 4.104261 AGTTTGGTAAGGAAGCCACTAAGT 59.896 41.667 0.00 0.00 34.02 2.24
6914 8180 3.695830 TGGTAAGGAAGCCACTAAGTG 57.304 47.619 0.00 0.00 0.00 3.16
6915 8181 2.976882 TGGTAAGGAAGCCACTAAGTGT 59.023 45.455 0.00 0.00 0.00 3.55
6916 8182 4.161876 TGGTAAGGAAGCCACTAAGTGTA 58.838 43.478 0.00 0.00 0.00 2.90
6917 8183 4.020839 TGGTAAGGAAGCCACTAAGTGTAC 60.021 45.833 0.00 0.00 0.00 2.90
6918 8184 4.020839 GGTAAGGAAGCCACTAAGTGTACA 60.021 45.833 0.00 0.00 0.00 2.90
6919 8185 4.910458 AAGGAAGCCACTAAGTGTACAT 57.090 40.909 0.00 0.00 0.00 2.29
6920 8186 4.207891 AGGAAGCCACTAAGTGTACATG 57.792 45.455 0.00 0.00 0.00 3.21
6921 8187 2.678336 GGAAGCCACTAAGTGTACATGC 59.322 50.000 0.00 0.00 0.00 4.06
6922 8188 3.600388 GAAGCCACTAAGTGTACATGCT 58.400 45.455 0.00 0.00 30.02 3.79
6923 8189 4.382685 GGAAGCCACTAAGTGTACATGCTA 60.383 45.833 0.00 0.00 29.07 3.49
6924 8190 4.124851 AGCCACTAAGTGTACATGCTAC 57.875 45.455 0.00 0.00 27.81 3.58
6925 8191 3.769844 AGCCACTAAGTGTACATGCTACT 59.230 43.478 0.00 0.00 27.81 2.57
6926 8192 4.223032 AGCCACTAAGTGTACATGCTACTT 59.777 41.667 0.00 12.57 38.19 2.24
6927 8193 4.935808 GCCACTAAGTGTACATGCTACTTT 59.064 41.667 13.02 7.56 36.22 2.66
6928 8194 5.411669 GCCACTAAGTGTACATGCTACTTTT 59.588 40.000 13.02 7.31 36.22 2.27
6929 8195 6.072673 GCCACTAAGTGTACATGCTACTTTTT 60.073 38.462 13.02 1.74 36.22 1.94
6930 8196 7.519002 CCACTAAGTGTACATGCTACTTTTTC 58.481 38.462 13.02 0.00 36.22 2.29
6931 8197 7.172532 CCACTAAGTGTACATGCTACTTTTTCA 59.827 37.037 13.02 0.00 36.22 2.69
6932 8198 8.223769 CACTAAGTGTACATGCTACTTTTTCAG 58.776 37.037 13.02 8.38 36.22 3.02
6933 8199 7.931948 ACTAAGTGTACATGCTACTTTTTCAGT 59.068 33.333 13.02 8.85 39.87 3.41
6934 8200 7.568199 AAGTGTACATGCTACTTTTTCAGTT 57.432 32.000 0.00 0.00 36.88 3.16
6935 8201 7.568199 AGTGTACATGCTACTTTTTCAGTTT 57.432 32.000 0.00 0.00 36.88 2.66
6936 8202 7.417612 AGTGTACATGCTACTTTTTCAGTTTG 58.582 34.615 0.00 0.00 36.88 2.93
6937 8203 6.142320 GTGTACATGCTACTTTTTCAGTTTGC 59.858 38.462 0.00 0.00 36.88 3.68
6938 8204 4.620982 ACATGCTACTTTTTCAGTTTGCC 58.379 39.130 0.00 0.00 36.88 4.52
6939 8205 4.342092 ACATGCTACTTTTTCAGTTTGCCT 59.658 37.500 0.00 0.00 36.88 4.75
6940 8206 5.534654 ACATGCTACTTTTTCAGTTTGCCTA 59.465 36.000 0.00 0.00 36.88 3.93
6941 8207 5.432885 TGCTACTTTTTCAGTTTGCCTAC 57.567 39.130 0.00 0.00 36.88 3.18
6942 8208 4.024387 TGCTACTTTTTCAGTTTGCCTACG 60.024 41.667 0.00 0.00 36.88 3.51
6943 8209 4.024302 GCTACTTTTTCAGTTTGCCTACGT 60.024 41.667 0.00 0.00 36.88 3.57
6944 8210 4.976224 ACTTTTTCAGTTTGCCTACGTT 57.024 36.364 0.00 0.00 27.32 3.99
6945 8211 5.319140 ACTTTTTCAGTTTGCCTACGTTT 57.681 34.783 0.00 0.00 27.32 3.60
6946 8212 5.716094 ACTTTTTCAGTTTGCCTACGTTTT 58.284 33.333 0.00 0.00 27.32 2.43
6947 8213 5.803461 ACTTTTTCAGTTTGCCTACGTTTTC 59.197 36.000 0.00 0.00 27.32 2.29
6948 8214 4.966965 TTTCAGTTTGCCTACGTTTTCA 57.033 36.364 0.00 0.00 0.00 2.69
6949 8215 3.955771 TCAGTTTGCCTACGTTTTCAC 57.044 42.857 0.00 0.00 0.00 3.18
6950 8216 3.537580 TCAGTTTGCCTACGTTTTCACT 58.462 40.909 0.00 0.00 0.00 3.41
6951 8217 4.695396 TCAGTTTGCCTACGTTTTCACTA 58.305 39.130 0.00 0.00 0.00 2.74
6952 8218 5.117584 TCAGTTTGCCTACGTTTTCACTAA 58.882 37.500 0.00 0.00 0.00 2.24
6953 8219 5.585445 TCAGTTTGCCTACGTTTTCACTAAA 59.415 36.000 0.00 0.00 0.00 1.85
6954 8220 6.261381 TCAGTTTGCCTACGTTTTCACTAAAT 59.739 34.615 0.00 0.00 0.00 1.40
6955 8221 6.577427 CAGTTTGCCTACGTTTTCACTAAATC 59.423 38.462 0.00 0.00 0.00 2.17
6956 8222 6.261381 AGTTTGCCTACGTTTTCACTAAATCA 59.739 34.615 0.00 0.00 0.00 2.57
6957 8223 5.856126 TGCCTACGTTTTCACTAAATCAG 57.144 39.130 0.00 0.00 0.00 2.90
6958 8224 4.153475 TGCCTACGTTTTCACTAAATCAGC 59.847 41.667 0.00 0.00 0.00 4.26
6959 8225 4.153475 GCCTACGTTTTCACTAAATCAGCA 59.847 41.667 0.00 0.00 0.00 4.41
6960 8226 5.618561 CCTACGTTTTCACTAAATCAGCAC 58.381 41.667 0.00 0.00 0.00 4.40
6961 8227 5.408604 CCTACGTTTTCACTAAATCAGCACT 59.591 40.000 0.00 0.00 0.00 4.40
6962 8228 5.751243 ACGTTTTCACTAAATCAGCACTT 57.249 34.783 0.00 0.00 0.00 3.16
6963 8229 6.131544 ACGTTTTCACTAAATCAGCACTTT 57.868 33.333 0.00 0.00 0.00 2.66
6964 8230 6.199393 ACGTTTTCACTAAATCAGCACTTTC 58.801 36.000 0.00 0.00 0.00 2.62
6965 8231 6.038271 ACGTTTTCACTAAATCAGCACTTTCT 59.962 34.615 0.00 0.00 0.00 2.52
6966 8232 6.912591 CGTTTTCACTAAATCAGCACTTTCTT 59.087 34.615 0.00 0.00 0.00 2.52
6967 8233 7.112148 CGTTTTCACTAAATCAGCACTTTCTTC 59.888 37.037 0.00 0.00 0.00 2.87
6968 8234 7.807977 TTTCACTAAATCAGCACTTTCTTCT 57.192 32.000 0.00 0.00 0.00 2.85
6969 8235 7.807977 TTCACTAAATCAGCACTTTCTTCTT 57.192 32.000 0.00 0.00 0.00 2.52
6970 8236 7.807977 TCACTAAATCAGCACTTTCTTCTTT 57.192 32.000 0.00 0.00 0.00 2.52
6971 8237 8.225603 TCACTAAATCAGCACTTTCTTCTTTT 57.774 30.769 0.00 0.00 0.00 2.27
6972 8238 8.131100 TCACTAAATCAGCACTTTCTTCTTTTG 58.869 33.333 0.00 0.00 0.00 2.44
6973 8239 7.380602 CACTAAATCAGCACTTTCTTCTTTTGG 59.619 37.037 0.00 0.00 0.00 3.28
6974 8240 4.861102 ATCAGCACTTTCTTCTTTTGGG 57.139 40.909 0.00 0.00 0.00 4.12
6975 8241 2.958355 TCAGCACTTTCTTCTTTTGGGG 59.042 45.455 0.00 0.00 0.00 4.96
6976 8242 2.036346 CAGCACTTTCTTCTTTTGGGGG 59.964 50.000 0.00 0.00 0.00 5.40
6977 8243 2.039418 GCACTTTCTTCTTTTGGGGGT 58.961 47.619 0.00 0.00 0.00 4.95
6978 8244 2.224042 GCACTTTCTTCTTTTGGGGGTG 60.224 50.000 0.00 0.00 0.00 4.61
6979 8245 3.295973 CACTTTCTTCTTTTGGGGGTGA 58.704 45.455 0.00 0.00 0.00 4.02
6980 8246 3.319122 CACTTTCTTCTTTTGGGGGTGAG 59.681 47.826 0.00 0.00 0.00 3.51
6981 8247 3.052869 ACTTTCTTCTTTTGGGGGTGAGT 60.053 43.478 0.00 0.00 0.00 3.41
6982 8248 3.680777 TTCTTCTTTTGGGGGTGAGTT 57.319 42.857 0.00 0.00 0.00 3.01
6983 8249 2.944129 TCTTCTTTTGGGGGTGAGTTG 58.056 47.619 0.00 0.00 0.00 3.16
6984 8250 1.341209 CTTCTTTTGGGGGTGAGTTGC 59.659 52.381 0.00 0.00 0.00 4.17
6985 8251 0.821711 TCTTTTGGGGGTGAGTTGCG 60.822 55.000 0.00 0.00 0.00 4.85
6986 8252 1.076632 TTTTGGGGGTGAGTTGCGT 60.077 52.632 0.00 0.00 0.00 5.24
6987 8253 0.684805 TTTTGGGGGTGAGTTGCGTT 60.685 50.000 0.00 0.00 0.00 4.84
6988 8254 1.388065 TTTGGGGGTGAGTTGCGTTG 61.388 55.000 0.00 0.00 0.00 4.10
6989 8255 2.983592 GGGGGTGAGTTGCGTTGG 60.984 66.667 0.00 0.00 0.00 3.77
6990 8256 2.203294 GGGGTGAGTTGCGTTGGT 60.203 61.111 0.00 0.00 0.00 3.67
6991 8257 1.826487 GGGGTGAGTTGCGTTGGTT 60.826 57.895 0.00 0.00 0.00 3.67
6992 8258 1.652563 GGGTGAGTTGCGTTGGTTC 59.347 57.895 0.00 0.00 0.00 3.62
6993 8259 0.818040 GGGTGAGTTGCGTTGGTTCT 60.818 55.000 0.00 0.00 0.00 3.01
6994 8260 1.021968 GGTGAGTTGCGTTGGTTCTT 58.978 50.000 0.00 0.00 0.00 2.52
6995 8261 1.404035 GGTGAGTTGCGTTGGTTCTTT 59.596 47.619 0.00 0.00 0.00 2.52
6996 8262 2.614983 GGTGAGTTGCGTTGGTTCTTTA 59.385 45.455 0.00 0.00 0.00 1.85
6997 8263 3.065648 GGTGAGTTGCGTTGGTTCTTTAA 59.934 43.478 0.00 0.00 0.00 1.52
6998 8264 4.261447 GGTGAGTTGCGTTGGTTCTTTAAT 60.261 41.667 0.00 0.00 0.00 1.40
6999 8265 5.278604 GTGAGTTGCGTTGGTTCTTTAATT 58.721 37.500 0.00 0.00 0.00 1.40
7000 8266 5.746721 GTGAGTTGCGTTGGTTCTTTAATTT 59.253 36.000 0.00 0.00 0.00 1.82
7001 8267 5.746245 TGAGTTGCGTTGGTTCTTTAATTTG 59.254 36.000 0.00 0.00 0.00 2.32
7002 8268 5.047188 AGTTGCGTTGGTTCTTTAATTTGG 58.953 37.500 0.00 0.00 0.00 3.28
7003 8269 4.657436 TGCGTTGGTTCTTTAATTTGGT 57.343 36.364 0.00 0.00 0.00 3.67
7004 8270 5.012328 TGCGTTGGTTCTTTAATTTGGTT 57.988 34.783 0.00 0.00 0.00 3.67
7005 8271 5.044558 TGCGTTGGTTCTTTAATTTGGTTC 58.955 37.500 0.00 0.00 0.00 3.62
7006 8272 4.147479 GCGTTGGTTCTTTAATTTGGTTCG 59.853 41.667 0.00 0.00 0.00 3.95
7007 8273 4.147479 CGTTGGTTCTTTAATTTGGTTCGC 59.853 41.667 0.00 0.00 0.00 4.70
7008 8274 5.286438 GTTGGTTCTTTAATTTGGTTCGCT 58.714 37.500 0.00 0.00 0.00 4.93
7009 8275 4.865776 TGGTTCTTTAATTTGGTTCGCTG 58.134 39.130 0.00 0.00 0.00 5.18
7010 8276 4.580995 TGGTTCTTTAATTTGGTTCGCTGA 59.419 37.500 0.00 0.00 0.00 4.26
7011 8277 5.067936 TGGTTCTTTAATTTGGTTCGCTGAA 59.932 36.000 0.00 0.00 0.00 3.02
7012 8278 5.980715 GGTTCTTTAATTTGGTTCGCTGAAA 59.019 36.000 0.00 0.00 0.00 2.69
7013 8279 6.477360 GGTTCTTTAATTTGGTTCGCTGAAAA 59.523 34.615 0.00 0.00 0.00 2.29
7014 8280 7.010645 GGTTCTTTAATTTGGTTCGCTGAAAAA 59.989 33.333 0.00 0.00 0.00 1.94
7015 8281 7.458038 TCTTTAATTTGGTTCGCTGAAAAAC 57.542 32.000 0.00 0.00 0.00 2.43
7016 8282 7.262048 TCTTTAATTTGGTTCGCTGAAAAACT 58.738 30.769 0.00 0.00 0.00 2.66
7017 8283 8.407064 TCTTTAATTTGGTTCGCTGAAAAACTA 58.593 29.630 0.00 0.00 0.00 2.24
7018 8284 7.917720 TTAATTTGGTTCGCTGAAAAACTAC 57.082 32.000 0.00 0.00 0.00 2.73
7019 8285 3.595709 TTGGTTCGCTGAAAAACTACG 57.404 42.857 0.00 0.00 0.00 3.51
7020 8286 2.823984 TGGTTCGCTGAAAAACTACGA 58.176 42.857 0.00 0.00 0.00 3.43
7021 8287 3.395639 TGGTTCGCTGAAAAACTACGAT 58.604 40.909 0.00 0.00 32.13 3.73
7022 8288 3.810941 TGGTTCGCTGAAAAACTACGATT 59.189 39.130 0.00 0.00 32.13 3.34
7023 8289 4.273969 TGGTTCGCTGAAAAACTACGATTT 59.726 37.500 0.00 0.00 32.13 2.17
7024 8290 5.209977 GGTTCGCTGAAAAACTACGATTTT 58.790 37.500 0.00 0.00 33.13 1.82
7025 8291 5.684184 GGTTCGCTGAAAAACTACGATTTTT 59.316 36.000 8.54 8.54 42.94 1.94
7060 8326 8.370493 CCATCAATGGTGTACTAGTATTTCAG 57.630 38.462 5.75 0.00 43.05 3.02
7061 8327 7.041780 CCATCAATGGTGTACTAGTATTTCAGC 60.042 40.741 5.75 9.66 43.05 4.26
7062 8328 7.182817 TCAATGGTGTACTAGTATTTCAGCT 57.817 36.000 17.16 5.58 0.00 4.24
7063 8329 7.265673 TCAATGGTGTACTAGTATTTCAGCTC 58.734 38.462 17.16 0.87 0.00 4.09
7064 8330 7.124298 TCAATGGTGTACTAGTATTTCAGCTCT 59.876 37.037 17.16 6.79 0.00 4.09
7065 8331 6.208988 TGGTGTACTAGTATTTCAGCTCTG 57.791 41.667 17.16 0.00 0.00 3.35
7066 8332 5.949952 TGGTGTACTAGTATTTCAGCTCTGA 59.050 40.000 17.16 0.00 37.91 3.27
7067 8333 6.607600 TGGTGTACTAGTATTTCAGCTCTGAT 59.392 38.462 17.16 0.00 39.64 2.90
7068 8334 7.124298 TGGTGTACTAGTATTTCAGCTCTGATT 59.876 37.037 17.16 0.00 39.64 2.57
7069 8335 7.982354 GGTGTACTAGTATTTCAGCTCTGATTT 59.018 37.037 5.75 0.00 39.64 2.17
7070 8336 9.372369 GTGTACTAGTATTTCAGCTCTGATTTT 57.628 33.333 5.75 0.00 39.64 1.82
7071 8337 9.944376 TGTACTAGTATTTCAGCTCTGATTTTT 57.056 29.630 5.75 0.00 39.64 1.94
7106 8372 8.370493 CCATCAATGGTGTACTAGTATTTCAG 57.630 38.462 5.75 0.00 43.05 3.02
7107 8373 7.041780 CCATCAATGGTGTACTAGTATTTCAGC 60.042 40.741 5.75 9.66 43.05 4.26
7108 8374 7.182817 TCAATGGTGTACTAGTATTTCAGCT 57.817 36.000 17.16 5.58 0.00 4.24
7109 8375 7.265673 TCAATGGTGTACTAGTATTTCAGCTC 58.734 38.462 17.16 0.87 0.00 4.09
7110 8376 7.124298 TCAATGGTGTACTAGTATTTCAGCTCT 59.876 37.037 17.16 6.79 0.00 4.09
7111 8377 6.852420 TGGTGTACTAGTATTTCAGCTCTT 57.148 37.500 17.16 0.00 0.00 2.85
7112 8378 7.949690 TGGTGTACTAGTATTTCAGCTCTTA 57.050 36.000 17.16 1.01 0.00 2.10
7113 8379 8.534954 TGGTGTACTAGTATTTCAGCTCTTAT 57.465 34.615 17.16 0.00 0.00 1.73
7114 8380 9.636789 TGGTGTACTAGTATTTCAGCTCTTATA 57.363 33.333 17.16 0.20 0.00 0.98
7120 8386 8.516234 ACTAGTATTTCAGCTCTTATATCACGG 58.484 37.037 0.00 0.00 0.00 4.94
7121 8387 7.291411 AGTATTTCAGCTCTTATATCACGGT 57.709 36.000 0.00 0.00 0.00 4.83
7122 8388 8.405418 AGTATTTCAGCTCTTATATCACGGTA 57.595 34.615 0.00 0.00 0.00 4.02
7123 8389 8.516234 AGTATTTCAGCTCTTATATCACGGTAG 58.484 37.037 0.00 0.00 0.00 3.18
7124 8390 4.768130 TCAGCTCTTATATCACGGTAGC 57.232 45.455 0.00 0.00 0.00 3.58
7125 8391 4.142038 TCAGCTCTTATATCACGGTAGCA 58.858 43.478 0.00 0.00 0.00 3.49
7126 8392 4.023107 TCAGCTCTTATATCACGGTAGCAC 60.023 45.833 0.00 0.00 0.00 4.40
7127 8393 3.889538 AGCTCTTATATCACGGTAGCACA 59.110 43.478 0.00 0.00 0.00 4.57
7128 8394 4.341235 AGCTCTTATATCACGGTAGCACAA 59.659 41.667 0.00 0.00 0.00 3.33
7129 8395 5.047847 GCTCTTATATCACGGTAGCACAAA 58.952 41.667 0.00 0.00 0.00 2.83
7130 8396 5.696724 GCTCTTATATCACGGTAGCACAAAT 59.303 40.000 0.00 0.00 0.00 2.32
7131 8397 6.346919 GCTCTTATATCACGGTAGCACAAATG 60.347 42.308 0.00 0.00 0.00 2.32
7132 8398 6.811954 TCTTATATCACGGTAGCACAAATGA 58.188 36.000 0.00 0.00 0.00 2.57
7133 8399 6.700081 TCTTATATCACGGTAGCACAAATGAC 59.300 38.462 0.00 0.00 0.00 3.06
7134 8400 2.831685 TCACGGTAGCACAAATGACT 57.168 45.000 0.00 0.00 0.00 3.41
7135 8401 2.412870 TCACGGTAGCACAAATGACTG 58.587 47.619 0.00 0.00 0.00 3.51
7136 8402 2.143122 CACGGTAGCACAAATGACTGT 58.857 47.619 0.00 0.00 31.53 3.55
7137 8403 2.548057 CACGGTAGCACAAATGACTGTT 59.452 45.455 0.00 0.00 28.85 3.16
7138 8404 2.548057 ACGGTAGCACAAATGACTGTTG 59.452 45.455 0.00 0.00 0.00 3.33
7139 8405 2.095768 CGGTAGCACAAATGACTGTTGG 60.096 50.000 0.00 0.00 0.00 3.77
7140 8406 2.884639 GGTAGCACAAATGACTGTTGGT 59.115 45.455 0.00 0.00 0.00 3.67
7141 8407 4.069304 GGTAGCACAAATGACTGTTGGTA 58.931 43.478 0.00 0.00 0.00 3.25
7142 8408 4.517453 GGTAGCACAAATGACTGTTGGTAA 59.483 41.667 0.00 0.00 0.00 2.85
7143 8409 5.009210 GGTAGCACAAATGACTGTTGGTAAA 59.991 40.000 0.00 0.00 0.00 2.01
7144 8410 5.186996 AGCACAAATGACTGTTGGTAAAG 57.813 39.130 0.00 0.00 0.00 1.85
7145 8411 4.644685 AGCACAAATGACTGTTGGTAAAGT 59.355 37.500 0.00 0.00 0.00 2.66
7146 8412 4.739716 GCACAAATGACTGTTGGTAAAGTG 59.260 41.667 0.00 0.00 0.00 3.16
7147 8413 5.280945 CACAAATGACTGTTGGTAAAGTGG 58.719 41.667 0.00 0.00 0.00 4.00
7148 8414 5.067153 CACAAATGACTGTTGGTAAAGTGGA 59.933 40.000 0.00 0.00 0.00 4.02
7149 8415 5.299279 ACAAATGACTGTTGGTAAAGTGGAG 59.701 40.000 0.00 0.00 0.00 3.86
7150 8416 3.485463 TGACTGTTGGTAAAGTGGAGG 57.515 47.619 0.00 0.00 0.00 4.30
7151 8417 2.152016 GACTGTTGGTAAAGTGGAGGC 58.848 52.381 0.00 0.00 0.00 4.70
7152 8418 1.493022 ACTGTTGGTAAAGTGGAGGCA 59.507 47.619 0.00 0.00 0.00 4.75
7153 8419 2.108250 ACTGTTGGTAAAGTGGAGGCAT 59.892 45.455 0.00 0.00 0.00 4.40
7154 8420 3.157087 CTGTTGGTAAAGTGGAGGCATT 58.843 45.455 0.00 0.00 0.00 3.56
7155 8421 3.153919 TGTTGGTAAAGTGGAGGCATTC 58.846 45.455 0.00 0.00 0.00 2.67
7156 8422 3.153919 GTTGGTAAAGTGGAGGCATTCA 58.846 45.455 0.00 0.00 0.00 2.57
7157 8423 2.790433 TGGTAAAGTGGAGGCATTCAC 58.210 47.619 0.20 0.20 0.00 3.18
7158 8424 1.737793 GGTAAAGTGGAGGCATTCACG 59.262 52.381 3.73 0.00 38.77 4.35
7159 8425 2.423577 GTAAAGTGGAGGCATTCACGT 58.576 47.619 3.73 0.00 38.77 4.49
7160 8426 1.981256 AAAGTGGAGGCATTCACGTT 58.019 45.000 5.08 5.08 38.77 3.99
7161 8427 1.523758 AAGTGGAGGCATTCACGTTC 58.476 50.000 3.73 0.00 38.77 3.95
7162 8428 0.321653 AGTGGAGGCATTCACGTTCC 60.322 55.000 3.73 0.00 38.77 3.62
7163 8429 1.375396 TGGAGGCATTCACGTTCCG 60.375 57.895 0.00 0.00 0.00 4.30
7164 8430 2.106683 GGAGGCATTCACGTTCCGG 61.107 63.158 0.00 0.00 0.00 5.14
7165 8431 1.079405 GAGGCATTCACGTTCCGGA 60.079 57.895 0.00 0.00 0.00 5.14
7166 8432 1.359459 GAGGCATTCACGTTCCGGAC 61.359 60.000 1.83 0.00 0.00 4.79
7167 8433 1.375523 GGCATTCACGTTCCGGACT 60.376 57.895 1.83 0.00 0.00 3.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
50 51 4.974591 GCATCCAGCACTAGTTTTAAGTG 58.025 43.478 0.00 0.00 45.80 3.16
197 198 2.653702 CAGATCGATCGGGGAGCC 59.346 66.667 19.33 0.00 0.00 4.70
208 209 3.066621 GCTAGCTATCCAGATCCAGATCG 59.933 52.174 7.70 0.00 42.48 3.69
209 210 4.280819 AGCTAGCTATCCAGATCCAGATC 58.719 47.826 17.69 0.00 38.09 2.75
210 211 4.335735 AGCTAGCTATCCAGATCCAGAT 57.664 45.455 17.69 1.13 0.00 2.90
211 212 3.824001 AGCTAGCTATCCAGATCCAGA 57.176 47.619 17.69 0.00 0.00 3.86
224 253 4.121317 CAGTCGTACTACTGTAGCTAGCT 58.879 47.826 23.12 23.12 41.63 3.32
235 264 3.242349 CGAGTCATCCACAGTCGTACTAC 60.242 52.174 0.00 0.00 32.94 2.73
237 266 1.738350 CGAGTCATCCACAGTCGTACT 59.262 52.381 0.00 0.00 32.94 2.73
240 269 1.213013 GCGAGTCATCCACAGTCGT 59.787 57.895 0.00 0.00 38.68 4.34
242 271 0.459237 CCAGCGAGTCATCCACAGTC 60.459 60.000 0.00 0.00 0.00 3.51
245 274 0.461548 GATCCAGCGAGTCATCCACA 59.538 55.000 0.00 0.00 0.00 4.17
248 277 0.599728 GCAGATCCAGCGAGTCATCC 60.600 60.000 0.00 0.00 0.00 3.51
249 278 0.103755 TGCAGATCCAGCGAGTCATC 59.896 55.000 3.62 0.00 33.85 2.92
251 280 0.103755 GATGCAGATCCAGCGAGTCA 59.896 55.000 0.00 0.00 33.85 3.41
252 281 0.938637 CGATGCAGATCCAGCGAGTC 60.939 60.000 3.90 1.91 46.51 3.36
253 282 1.067084 CGATGCAGATCCAGCGAGT 59.933 57.895 3.90 0.00 46.51 4.18
281 314 0.033228 GGAGAGATGCGTGATGAGGG 59.967 60.000 0.00 0.00 0.00 4.30
318 351 3.061697 GTGGGCGAGTTGAGTTAATTACG 59.938 47.826 0.00 0.00 0.00 3.18
323 356 1.414919 AGTGTGGGCGAGTTGAGTTAA 59.585 47.619 0.00 0.00 0.00 2.01
324 357 1.045407 AGTGTGGGCGAGTTGAGTTA 58.955 50.000 0.00 0.00 0.00 2.24
336 369 5.589452 CAGTAGTAGGTAGAGTAAGTGTGGG 59.411 48.000 0.00 0.00 0.00 4.61
436 469 5.807011 GCACACAAGATAAAACCAATGGATC 59.193 40.000 6.16 0.00 0.00 3.36
496 529 3.986572 CGCATACCAGATTCACTCATCTC 59.013 47.826 0.00 0.00 30.50 2.75
516 569 3.414700 CGCACCACCTGAAGACGC 61.415 66.667 0.00 0.00 0.00 5.19
559 636 6.307077 ACTGAAAAGAAACGTGCAGTTAAAAC 59.693 34.615 0.00 0.00 43.37 2.43
571 648 1.334869 AGCTGGCACTGAAAAGAAACG 59.665 47.619 0.00 0.00 0.00 3.60
614 691 2.962421 CCCTTGCTCTCTAGGAAGTAGG 59.038 54.545 6.01 0.36 46.64 3.18
621 698 0.263172 TCCCTCCCTTGCTCTCTAGG 59.737 60.000 0.00 0.00 35.38 3.02
623 700 1.309876 TCTCCCTCCCTTGCTCTCTA 58.690 55.000 0.00 0.00 0.00 2.43
627 704 2.390225 TAGATCTCCCTCCCTTGCTC 57.610 55.000 0.00 0.00 0.00 4.26
719 1494 0.108186 TGGTGTAGCAGGAATCAGCG 60.108 55.000 0.00 0.00 35.48 5.18
772 1549 4.278170 TCAAACGAAAAGGCACAAGATCAT 59.722 37.500 0.00 0.00 0.00 2.45
784 1561 6.885735 AACACCAAGAATTCAAACGAAAAG 57.114 33.333 8.44 0.00 0.00 2.27
788 1565 5.317733 ACAAACACCAAGAATTCAAACGA 57.682 34.783 8.44 0.00 0.00 3.85
861 1692 7.877097 GCAAGGATAATCAGATTCAGTCACTAT 59.123 37.037 0.00 0.00 0.00 2.12
1391 2273 7.362834 GCTTGGCAAATTTAAATTTATTGCCCT 60.363 33.333 32.66 10.67 43.90 5.19
1441 2323 2.668457 CAGTGGCAAGTGATCGAGTAAC 59.332 50.000 0.00 0.00 0.00 2.50
1443 2325 2.094700 GTCAGTGGCAAGTGATCGAGTA 60.095 50.000 0.90 0.00 38.04 2.59
1452 2334 2.191908 TTGCGGTCAGTGGCAAGT 59.808 55.556 0.00 0.00 43.63 3.16
1490 2372 0.107410 TTCGCCAACAACACCTGACT 60.107 50.000 0.00 0.00 0.00 3.41
1509 2391 4.392940 CTCTTGTGTCCACCTCAATCTTT 58.607 43.478 0.00 0.00 0.00 2.52
1520 2402 0.249447 CACGAGTGCTCTTGTGTCCA 60.249 55.000 22.67 0.00 45.86 4.02
1559 2441 2.358737 CAGTCTTGTCGCCACCCC 60.359 66.667 0.00 0.00 0.00 4.95
1663 2545 7.201679 CCATATCTTCTTAGTGAACTTGCCTTG 60.202 40.741 0.00 0.00 0.00 3.61
1713 2595 5.875359 GGCTGTACTTAATAGCTCAACAACT 59.125 40.000 0.00 0.00 37.58 3.16
1715 2597 5.800296 TGGCTGTACTTAATAGCTCAACAA 58.200 37.500 0.00 0.00 37.58 2.83
1773 2655 2.124695 GCCCTGTTTAGAGCCCCG 60.125 66.667 0.00 0.00 0.00 5.73
1987 2872 0.988832 TCGGGCCCTAACTTGTCAAT 59.011 50.000 22.43 0.00 0.00 2.57
2575 3543 7.711339 ACTTCATCGGTTCCTGAATATAGTTTC 59.289 37.037 0.00 0.00 31.39 2.78
2806 3805 3.170717 TGACCCAAGTCCGAAGATAACT 58.829 45.455 0.00 0.00 42.81 2.24
3121 4136 4.814234 TGTATAGCTTGAATAAGGGCAACG 59.186 41.667 0.00 0.00 34.40 4.10
3161 4180 5.772004 ACCATTCTCCTCTGTAGTGAGTAT 58.228 41.667 0.00 0.00 32.50 2.12
3184 4203 4.019411 TCCTTTAGCACATCAACCTCATGA 60.019 41.667 0.00 0.00 0.00 3.07
3454 4476 8.230486 CACATGGACACAATTTTACTAAGACTC 58.770 37.037 0.00 0.00 0.00 3.36
3825 4851 1.081892 CAACGAATCACCAGGCTGAG 58.918 55.000 17.94 8.80 0.00 3.35
3846 4872 5.357596 AGAAGACGTAGACTTGGGAAGATAC 59.642 44.000 0.00 0.00 43.34 2.24
3949 4975 7.994911 TCCGGTAGTCTACAAATATCAGTCTTA 59.005 37.037 12.08 0.00 0.00 2.10
3951 4977 6.363065 TCCGGTAGTCTACAAATATCAGTCT 58.637 40.000 12.08 0.00 0.00 3.24
4061 5087 0.779997 AGGAACCTCAACCCTTGCAT 59.220 50.000 0.00 0.00 0.00 3.96
4089 5115 6.432162 AGGAATACTACTTACACGAGTGTCAA 59.568 38.462 12.54 5.38 43.74 3.18
4135 5161 4.344104 ACCCATTCAGTACCCTCAAATTG 58.656 43.478 0.00 0.00 0.00 2.32
4150 5176 5.385198 TCAATATAGGCTGGAAACCCATTC 58.615 41.667 0.00 0.00 37.31 2.67
4151 5177 5.402054 TCAATATAGGCTGGAAACCCATT 57.598 39.130 0.00 0.00 32.36 3.16
4190 5216 0.551131 AGAGGCCCCAACTCTTCCAT 60.551 55.000 0.00 0.00 42.41 3.41
4213 5239 5.413833 CCATAGTGAAAGACAATTGAGCTGT 59.586 40.000 13.59 3.93 0.00 4.40
4235 5261 6.816640 GCACTAGATACATTTTGTAGACACCA 59.183 38.462 0.00 0.00 36.14 4.17
4238 5264 7.182817 AGGCACTAGATACATTTTGTAGACA 57.817 36.000 0.00 0.00 34.04 3.41
4244 5270 6.324819 CCAACAAGGCACTAGATACATTTTG 58.675 40.000 0.00 0.00 38.49 2.44
4279 5305 9.856488 GTAAGATTTTCCTTTTCATTTACCCTC 57.144 33.333 0.00 0.00 0.00 4.30
4290 5316 9.733556 AAACAAGTTTGGTAAGATTTTCCTTTT 57.266 25.926 0.00 0.00 0.00 2.27
4314 5340 5.536916 CCCACTCTACCACCACATTTTAAAA 59.463 40.000 2.51 2.51 0.00 1.52
4358 5384 4.999310 TCCTCCTTTGACTTAGAGACTGA 58.001 43.478 0.00 0.00 0.00 3.41
4359 5385 4.381505 GCTCCTCCTTTGACTTAGAGACTG 60.382 50.000 0.00 0.00 0.00 3.51
4367 5393 6.721208 TCAATTATTTGCTCCTCCTTTGACTT 59.279 34.615 0.00 0.00 32.61 3.01
4372 5398 4.403752 GCCTCAATTATTTGCTCCTCCTTT 59.596 41.667 0.00 0.00 32.61 3.11
4448 5477 3.039134 CCGGCGGCCAAAATATCC 58.961 61.111 20.71 0.00 0.00 2.59
4508 5537 3.381908 TCGAGGACTAGAATCTTCAAGCC 59.618 47.826 0.00 0.00 0.00 4.35
4642 5671 2.160417 GTGGAGCTGATTGTACTGTTGC 59.840 50.000 0.00 0.00 0.00 4.17
4660 5689 3.198068 CAACTGATATGAAGGACCGTGG 58.802 50.000 0.00 0.00 0.00 4.94
4664 5693 3.567478 AGCCAACTGATATGAAGGACC 57.433 47.619 0.00 0.00 0.00 4.46
4690 5725 8.664669 AATACAAGTTATGGAGTTTGGGAAAT 57.335 30.769 0.00 0.00 0.00 2.17
4705 5740 7.446931 TGCTTCATTCCAGACAAATACAAGTTA 59.553 33.333 0.00 0.00 0.00 2.24
4708 5743 6.258230 TGCTTCATTCCAGACAAATACAAG 57.742 37.500 0.00 0.00 0.00 3.16
4712 5747 5.127519 CCCATTGCTTCATTCCAGACAAATA 59.872 40.000 0.00 0.00 0.00 1.40
4719 5754 2.029623 CCTCCCATTGCTTCATTCCAG 58.970 52.381 0.00 0.00 0.00 3.86
4727 5762 1.142688 ACCCACTCCTCCCATTGCTT 61.143 55.000 0.00 0.00 0.00 3.91
4836 5871 1.736645 CCGTGTCGTCCACCATGTC 60.737 63.158 0.00 0.00 41.26 3.06
4837 5872 2.342279 CCGTGTCGTCCACCATGT 59.658 61.111 0.00 0.00 41.26 3.21
4953 5989 0.883370 GACCGGACCGAAGCTTTGTT 60.883 55.000 17.49 0.00 0.00 2.83
4975 6011 0.389948 CAGTCGGCTCGGTTAAAGCT 60.390 55.000 0.00 0.00 39.75 3.74
4993 6029 3.289062 TGTTCGTCGGTCCGCTCA 61.289 61.111 6.34 0.00 0.00 4.26
5415 6462 0.730834 CCAGCGACTTCTGTGACTCG 60.731 60.000 0.00 0.00 32.32 4.18
5731 6778 7.125792 ACAAAGTTCTCTAAAGAGTGGAGAA 57.874 36.000 6.87 0.00 41.78 2.87
5742 6789 9.314321 CTCAACTACAGAAACAAAGTTCTCTAA 57.686 33.333 0.00 0.00 35.63 2.10
5833 6880 4.261801 GAGCTTTGGGCAGTACTTGATTA 58.738 43.478 0.00 0.00 44.79 1.75
5907 6954 0.178961 GGAAGTTGGCTTTCCCACCT 60.179 55.000 5.14 0.00 45.34 4.00
5909 6956 0.961753 CTGGAAGTTGGCTTTCCCAC 59.038 55.000 11.59 0.00 45.34 4.61
5918 6965 3.071874 TGCAGGTAATCTGGAAGTTGG 57.928 47.619 0.00 0.00 40.95 3.77
5929 6976 7.574607 ACTAGGCTTTATAGTTTGCAGGTAAT 58.425 34.615 0.00 0.00 29.01 1.89
5930 6977 6.954232 ACTAGGCTTTATAGTTTGCAGGTAA 58.046 36.000 0.00 0.00 29.01 2.85
5943 6990 4.337555 CAGCAGCAAATGACTAGGCTTTAT 59.662 41.667 0.00 0.00 33.60 1.40
6111 7158 1.825090 TTTGTCTGTATGCTGCAGGG 58.175 50.000 17.12 0.00 34.89 4.45
6118 7165 7.502120 ACCTGATGAATATTTGTCTGTATGC 57.498 36.000 0.00 0.00 0.00 3.14
6235 7463 2.223745 GGCAAGGGAAACGAAACAGTA 58.776 47.619 0.00 0.00 0.00 2.74
6300 7529 5.709966 CATCATATGTCCCATTCATTGCTG 58.290 41.667 1.90 0.00 0.00 4.41
6379 7616 6.927416 TGAGATTCCAATTGTTTCCATGAAG 58.073 36.000 4.43 0.00 0.00 3.02
6382 7619 6.636705 ACATGAGATTCCAATTGTTTCCATG 58.363 36.000 0.00 13.64 35.25 3.66
6383 7620 6.862469 ACATGAGATTCCAATTGTTTCCAT 57.138 33.333 0.00 2.39 0.00 3.41
6469 7707 1.134670 GGCCAACTCACTAGCTGTAGG 60.135 57.143 0.00 0.00 0.00 3.18
6470 7708 1.550524 TGGCCAACTCACTAGCTGTAG 59.449 52.381 0.61 0.00 0.00 2.74
6471 7709 1.639722 TGGCCAACTCACTAGCTGTA 58.360 50.000 0.61 0.00 0.00 2.74
6472 7710 0.987294 ATGGCCAACTCACTAGCTGT 59.013 50.000 10.96 0.00 0.00 4.40
6473 7711 1.376543 CATGGCCAACTCACTAGCTG 58.623 55.000 10.96 0.00 0.00 4.24
6474 7712 0.393537 GCATGGCCAACTCACTAGCT 60.394 55.000 10.96 0.00 0.00 3.32
6475 7713 0.677731 TGCATGGCCAACTCACTAGC 60.678 55.000 10.96 4.69 0.00 3.42
6476 7714 1.825090 TTGCATGGCCAACTCACTAG 58.175 50.000 10.96 0.00 0.00 2.57
6477 7715 1.885887 GTTTGCATGGCCAACTCACTA 59.114 47.619 10.96 0.00 32.52 2.74
6478 7716 0.675633 GTTTGCATGGCCAACTCACT 59.324 50.000 10.96 0.00 32.52 3.41
6479 7717 0.319813 GGTTTGCATGGCCAACTCAC 60.320 55.000 10.96 2.91 35.07 3.51
6480 7718 1.470996 GGGTTTGCATGGCCAACTCA 61.471 55.000 10.96 5.00 35.20 3.41
6481 7719 1.293179 GGGTTTGCATGGCCAACTC 59.707 57.895 10.96 0.00 35.07 3.01
6482 7720 2.216331 GGGGTTTGCATGGCCAACT 61.216 57.895 10.96 0.00 35.07 3.16
6483 7721 2.347114 GGGGTTTGCATGGCCAAC 59.653 61.111 10.96 5.71 34.14 3.77
6484 7722 2.927317 GGGGGTTTGCATGGCCAA 60.927 61.111 10.96 0.00 0.00 4.52
6487 7725 2.830186 TAGTCGGGGGTTTGCATGGC 62.830 60.000 0.00 0.00 0.00 4.40
6488 7726 1.029947 GTAGTCGGGGGTTTGCATGG 61.030 60.000 0.00 0.00 0.00 3.66
6489 7727 0.035439 AGTAGTCGGGGGTTTGCATG 60.035 55.000 0.00 0.00 0.00 4.06
6490 7728 0.035439 CAGTAGTCGGGGGTTTGCAT 60.035 55.000 0.00 0.00 0.00 3.96
6491 7729 1.373435 CAGTAGTCGGGGGTTTGCA 59.627 57.895 0.00 0.00 0.00 4.08
6492 7730 0.953960 CACAGTAGTCGGGGGTTTGC 60.954 60.000 0.00 0.00 0.00 3.68
6493 7731 0.682852 TCACAGTAGTCGGGGGTTTG 59.317 55.000 0.00 0.00 0.00 2.93
6494 7732 1.278127 CATCACAGTAGTCGGGGGTTT 59.722 52.381 0.00 0.00 0.00 3.27
6495 7733 0.902531 CATCACAGTAGTCGGGGGTT 59.097 55.000 0.00 0.00 0.00 4.11
6496 7734 0.976073 CCATCACAGTAGTCGGGGGT 60.976 60.000 0.00 0.00 0.00 4.95
6577 7843 5.073311 TGGGTCTCGCTTATATATCAAGC 57.927 43.478 10.55 10.55 43.99 4.01
6604 7870 2.827921 CCATTTACCTGGAAGCAAAGCT 59.172 45.455 0.00 0.00 42.56 3.74
6613 7879 2.910319 ACAGCACTACCATTTACCTGGA 59.090 45.455 0.00 0.00 39.73 3.86
6635 7901 1.931841 CCTGACTCACATCTCGCAATG 59.068 52.381 0.00 0.00 0.00 2.82
6639 7905 2.370281 TTTCCTGACTCACATCTCGC 57.630 50.000 0.00 0.00 0.00 5.03
6739 8005 6.639632 ACATACATCACATTATTCCAAGCC 57.360 37.500 0.00 0.00 0.00 4.35
6874 8140 1.583054 AACTGACAACGACAAGGAGC 58.417 50.000 0.00 0.00 0.00 4.70
6897 8163 5.730550 CATGTACACTTAGTGGCTTCCTTA 58.269 41.667 17.21 0.00 37.94 2.69
6907 8173 7.931948 ACTGAAAAAGTAGCATGTACACTTAGT 59.068 33.333 0.00 6.44 37.36 2.24
6908 8174 8.311650 ACTGAAAAAGTAGCATGTACACTTAG 57.688 34.615 0.00 5.98 37.36 2.18
6909 8175 8.671384 AACTGAAAAAGTAGCATGTACACTTA 57.329 30.769 0.00 0.00 38.56 2.24
6910 8176 7.568199 AACTGAAAAAGTAGCATGTACACTT 57.432 32.000 0.00 0.00 38.56 3.16
6911 8177 7.417612 CAAACTGAAAAAGTAGCATGTACACT 58.582 34.615 0.00 0.00 38.56 3.55
6912 8178 6.142320 GCAAACTGAAAAAGTAGCATGTACAC 59.858 38.462 0.00 0.00 38.56 2.90
6913 8179 6.205784 GCAAACTGAAAAAGTAGCATGTACA 58.794 36.000 0.00 0.00 38.56 2.90
6914 8180 5.629435 GGCAAACTGAAAAAGTAGCATGTAC 59.371 40.000 0.00 0.00 40.20 2.90
6915 8181 5.534654 AGGCAAACTGAAAAAGTAGCATGTA 59.465 36.000 0.00 0.00 40.20 2.29
6916 8182 4.342092 AGGCAAACTGAAAAAGTAGCATGT 59.658 37.500 0.00 0.00 40.20 3.21
6917 8183 4.874970 AGGCAAACTGAAAAAGTAGCATG 58.125 39.130 0.00 0.00 40.20 4.06
6918 8184 5.334879 CGTAGGCAAACTGAAAAAGTAGCAT 60.335 40.000 0.00 0.00 40.20 3.79
6919 8185 4.024387 CGTAGGCAAACTGAAAAAGTAGCA 60.024 41.667 0.00 0.00 40.20 3.49
6920 8186 4.024302 ACGTAGGCAAACTGAAAAAGTAGC 60.024 41.667 0.00 0.00 38.56 3.58
6921 8187 5.668558 ACGTAGGCAAACTGAAAAAGTAG 57.331 39.130 0.00 0.00 38.56 2.57
6922 8188 6.439675 AAACGTAGGCAAACTGAAAAAGTA 57.560 33.333 0.00 0.00 38.56 2.24
6923 8189 4.976224 AACGTAGGCAAACTGAAAAAGT 57.024 36.364 0.00 0.00 42.60 2.66
6924 8190 5.802956 TGAAAACGTAGGCAAACTGAAAAAG 59.197 36.000 0.00 0.00 0.00 2.27
6925 8191 5.573669 GTGAAAACGTAGGCAAACTGAAAAA 59.426 36.000 0.00 0.00 0.00 1.94
6926 8192 5.096849 GTGAAAACGTAGGCAAACTGAAAA 58.903 37.500 0.00 0.00 0.00 2.29
6927 8193 4.396790 AGTGAAAACGTAGGCAAACTGAAA 59.603 37.500 0.00 0.00 0.00 2.69
6928 8194 3.942748 AGTGAAAACGTAGGCAAACTGAA 59.057 39.130 0.00 0.00 0.00 3.02
6929 8195 3.537580 AGTGAAAACGTAGGCAAACTGA 58.462 40.909 0.00 0.00 0.00 3.41
6930 8196 3.963383 AGTGAAAACGTAGGCAAACTG 57.037 42.857 0.00 0.00 0.00 3.16
6931 8197 6.261381 TGATTTAGTGAAAACGTAGGCAAACT 59.739 34.615 0.00 0.00 0.00 2.66
6932 8198 6.432107 TGATTTAGTGAAAACGTAGGCAAAC 58.568 36.000 0.00 0.00 0.00 2.93
6933 8199 6.621316 TGATTTAGTGAAAACGTAGGCAAA 57.379 33.333 0.00 0.00 0.00 3.68
6934 8200 5.334569 GCTGATTTAGTGAAAACGTAGGCAA 60.335 40.000 0.00 0.00 0.00 4.52
6935 8201 4.153475 GCTGATTTAGTGAAAACGTAGGCA 59.847 41.667 0.00 0.00 0.00 4.75
6936 8202 4.153475 TGCTGATTTAGTGAAAACGTAGGC 59.847 41.667 0.00 0.00 0.00 3.93
6937 8203 5.408604 AGTGCTGATTTAGTGAAAACGTAGG 59.591 40.000 0.00 0.00 0.00 3.18
6938 8204 6.467723 AGTGCTGATTTAGTGAAAACGTAG 57.532 37.500 0.00 0.00 0.00 3.51
6939 8205 6.854496 AAGTGCTGATTTAGTGAAAACGTA 57.146 33.333 0.00 0.00 0.00 3.57
6940 8206 5.751243 AAGTGCTGATTTAGTGAAAACGT 57.249 34.783 0.00 0.00 0.00 3.99
6941 8207 6.430451 AGAAAGTGCTGATTTAGTGAAAACG 58.570 36.000 0.00 0.00 0.00 3.60
6942 8208 8.131731 AGAAGAAAGTGCTGATTTAGTGAAAAC 58.868 33.333 0.00 0.00 0.00 2.43
6943 8209 8.225603 AGAAGAAAGTGCTGATTTAGTGAAAA 57.774 30.769 0.00 0.00 0.00 2.29
6944 8210 7.807977 AGAAGAAAGTGCTGATTTAGTGAAA 57.192 32.000 0.00 0.00 0.00 2.69
6945 8211 7.807977 AAGAAGAAAGTGCTGATTTAGTGAA 57.192 32.000 0.00 0.00 0.00 3.18
6946 8212 7.807977 AAAGAAGAAAGTGCTGATTTAGTGA 57.192 32.000 0.00 0.00 0.00 3.41
6947 8213 7.380602 CCAAAAGAAGAAAGTGCTGATTTAGTG 59.619 37.037 0.00 0.00 0.00 2.74
6948 8214 7.428826 CCAAAAGAAGAAAGTGCTGATTTAGT 58.571 34.615 0.00 0.00 0.00 2.24
6949 8215 6.865205 CCCAAAAGAAGAAAGTGCTGATTTAG 59.135 38.462 0.00 0.00 0.00 1.85
6950 8216 6.239289 CCCCAAAAGAAGAAAGTGCTGATTTA 60.239 38.462 0.00 0.00 0.00 1.40
6951 8217 5.453762 CCCCAAAAGAAGAAAGTGCTGATTT 60.454 40.000 0.00 0.00 0.00 2.17
6952 8218 4.039609 CCCCAAAAGAAGAAAGTGCTGATT 59.960 41.667 0.00 0.00 0.00 2.57
6953 8219 3.575687 CCCCAAAAGAAGAAAGTGCTGAT 59.424 43.478 0.00 0.00 0.00 2.90
6954 8220 2.958355 CCCCAAAAGAAGAAAGTGCTGA 59.042 45.455 0.00 0.00 0.00 4.26
6955 8221 2.036346 CCCCCAAAAGAAGAAAGTGCTG 59.964 50.000 0.00 0.00 0.00 4.41
6956 8222 2.319844 CCCCCAAAAGAAGAAAGTGCT 58.680 47.619 0.00 0.00 0.00 4.40
6957 8223 2.039418 ACCCCCAAAAGAAGAAAGTGC 58.961 47.619 0.00 0.00 0.00 4.40
6958 8224 3.295973 TCACCCCCAAAAGAAGAAAGTG 58.704 45.455 0.00 0.00 0.00 3.16
6959 8225 3.052869 ACTCACCCCCAAAAGAAGAAAGT 60.053 43.478 0.00 0.00 0.00 2.66
6960 8226 3.566351 ACTCACCCCCAAAAGAAGAAAG 58.434 45.455 0.00 0.00 0.00 2.62
6961 8227 3.680777 ACTCACCCCCAAAAGAAGAAA 57.319 42.857 0.00 0.00 0.00 2.52
6962 8228 3.295973 CAACTCACCCCCAAAAGAAGAA 58.704 45.455 0.00 0.00 0.00 2.52
6963 8229 2.944129 CAACTCACCCCCAAAAGAAGA 58.056 47.619 0.00 0.00 0.00 2.87
6964 8230 1.341209 GCAACTCACCCCCAAAAGAAG 59.659 52.381 0.00 0.00 0.00 2.85
6965 8231 1.408969 GCAACTCACCCCCAAAAGAA 58.591 50.000 0.00 0.00 0.00 2.52
6966 8232 0.821711 CGCAACTCACCCCCAAAAGA 60.822 55.000 0.00 0.00 0.00 2.52
6967 8233 1.106944 ACGCAACTCACCCCCAAAAG 61.107 55.000 0.00 0.00 0.00 2.27
6968 8234 0.684805 AACGCAACTCACCCCCAAAA 60.685 50.000 0.00 0.00 0.00 2.44
6969 8235 1.076632 AACGCAACTCACCCCCAAA 60.077 52.632 0.00 0.00 0.00 3.28
6970 8236 1.826054 CAACGCAACTCACCCCCAA 60.826 57.895 0.00 0.00 0.00 4.12
6971 8237 2.203280 CAACGCAACTCACCCCCA 60.203 61.111 0.00 0.00 0.00 4.96
6972 8238 2.983592 CCAACGCAACTCACCCCC 60.984 66.667 0.00 0.00 0.00 5.40
6973 8239 1.792118 GAACCAACGCAACTCACCCC 61.792 60.000 0.00 0.00 0.00 4.95
6974 8240 0.818040 AGAACCAACGCAACTCACCC 60.818 55.000 0.00 0.00 0.00 4.61
6975 8241 1.021968 AAGAACCAACGCAACTCACC 58.978 50.000 0.00 0.00 0.00 4.02
6976 8242 2.844122 AAAGAACCAACGCAACTCAC 57.156 45.000 0.00 0.00 0.00 3.51
6977 8243 5.508200 AATTAAAGAACCAACGCAACTCA 57.492 34.783 0.00 0.00 0.00 3.41
6978 8244 5.174943 CCAAATTAAAGAACCAACGCAACTC 59.825 40.000 0.00 0.00 0.00 3.01
6979 8245 5.047188 CCAAATTAAAGAACCAACGCAACT 58.953 37.500 0.00 0.00 0.00 3.16
6980 8246 4.806775 ACCAAATTAAAGAACCAACGCAAC 59.193 37.500 0.00 0.00 0.00 4.17
6981 8247 5.012328 ACCAAATTAAAGAACCAACGCAA 57.988 34.783 0.00 0.00 0.00 4.85
6982 8248 4.657436 ACCAAATTAAAGAACCAACGCA 57.343 36.364 0.00 0.00 0.00 5.24
6983 8249 4.147479 CGAACCAAATTAAAGAACCAACGC 59.853 41.667 0.00 0.00 0.00 4.84
6984 8250 4.147479 GCGAACCAAATTAAAGAACCAACG 59.853 41.667 0.00 0.00 0.00 4.10
6985 8251 5.174943 CAGCGAACCAAATTAAAGAACCAAC 59.825 40.000 0.00 0.00 0.00 3.77
6986 8252 5.067936 TCAGCGAACCAAATTAAAGAACCAA 59.932 36.000 0.00 0.00 0.00 3.67
6987 8253 4.580995 TCAGCGAACCAAATTAAAGAACCA 59.419 37.500 0.00 0.00 0.00 3.67
6988 8254 5.116069 TCAGCGAACCAAATTAAAGAACC 57.884 39.130 0.00 0.00 0.00 3.62
6989 8255 7.458038 TTTTCAGCGAACCAAATTAAAGAAC 57.542 32.000 0.00 0.00 0.00 3.01
6990 8256 7.762159 AGTTTTTCAGCGAACCAAATTAAAGAA 59.238 29.630 0.00 0.00 0.00 2.52
6991 8257 7.262048 AGTTTTTCAGCGAACCAAATTAAAGA 58.738 30.769 0.00 0.00 0.00 2.52
6992 8258 7.463469 AGTTTTTCAGCGAACCAAATTAAAG 57.537 32.000 0.00 0.00 0.00 1.85
6993 8259 7.166142 CGTAGTTTTTCAGCGAACCAAATTAAA 59.834 33.333 0.00 0.00 0.00 1.52
6994 8260 6.633634 CGTAGTTTTTCAGCGAACCAAATTAA 59.366 34.615 0.00 0.00 0.00 1.40
6995 8261 6.018098 TCGTAGTTTTTCAGCGAACCAAATTA 60.018 34.615 0.00 0.00 0.00 1.40
6996 8262 4.973663 CGTAGTTTTTCAGCGAACCAAATT 59.026 37.500 0.00 0.00 0.00 1.82
6997 8263 4.273969 TCGTAGTTTTTCAGCGAACCAAAT 59.726 37.500 0.00 0.00 0.00 2.32
6998 8264 3.622163 TCGTAGTTTTTCAGCGAACCAAA 59.378 39.130 0.00 0.00 0.00 3.28
6999 8265 3.196463 TCGTAGTTTTTCAGCGAACCAA 58.804 40.909 0.00 0.00 0.00 3.67
7000 8266 2.823984 TCGTAGTTTTTCAGCGAACCA 58.176 42.857 0.00 0.00 0.00 3.67
7001 8267 4.400036 AATCGTAGTTTTTCAGCGAACC 57.600 40.909 0.00 0.00 35.20 3.62
7002 8268 6.727569 AAAAATCGTAGTTTTTCAGCGAAC 57.272 33.333 0.00 0.00 36.79 3.95
7036 8302 7.712639 AGCTGAAATACTAGTACACCATTGATG 59.287 37.037 4.31 0.00 0.00 3.07
7037 8303 7.796054 AGCTGAAATACTAGTACACCATTGAT 58.204 34.615 4.31 0.00 0.00 2.57
7038 8304 7.124298 AGAGCTGAAATACTAGTACACCATTGA 59.876 37.037 4.31 0.00 0.00 2.57
7039 8305 7.223582 CAGAGCTGAAATACTAGTACACCATTG 59.776 40.741 4.31 0.00 0.00 2.82
7040 8306 7.124298 TCAGAGCTGAAATACTAGTACACCATT 59.876 37.037 4.31 0.00 36.53 3.16
7041 8307 6.607600 TCAGAGCTGAAATACTAGTACACCAT 59.392 38.462 4.31 0.00 36.53 3.55
7042 8308 5.949952 TCAGAGCTGAAATACTAGTACACCA 59.050 40.000 4.31 2.60 36.53 4.17
7043 8309 6.452494 TCAGAGCTGAAATACTAGTACACC 57.548 41.667 4.31 0.00 36.53 4.16
7044 8310 8.934507 AAATCAGAGCTGAAATACTAGTACAC 57.065 34.615 4.31 0.62 43.58 2.90
7045 8311 9.944376 AAAAATCAGAGCTGAAATACTAGTACA 57.056 29.630 4.31 0.00 43.58 2.90
7082 8348 7.712639 AGCTGAAATACTAGTACACCATTGATG 59.287 37.037 4.31 0.00 0.00 3.07
7083 8349 7.796054 AGCTGAAATACTAGTACACCATTGAT 58.204 34.615 4.31 0.00 0.00 2.57
7084 8350 7.124298 AGAGCTGAAATACTAGTACACCATTGA 59.876 37.037 4.31 0.00 0.00 2.57
7085 8351 7.268586 AGAGCTGAAATACTAGTACACCATTG 58.731 38.462 4.31 0.00 0.00 2.82
7086 8352 7.425224 AGAGCTGAAATACTAGTACACCATT 57.575 36.000 4.31 0.00 0.00 3.16
7087 8353 7.425224 AAGAGCTGAAATACTAGTACACCAT 57.575 36.000 4.31 0.00 0.00 3.55
7088 8354 6.852420 AAGAGCTGAAATACTAGTACACCA 57.148 37.500 4.31 2.60 0.00 4.17
7094 8360 8.516234 CCGTGATATAAGAGCTGAAATACTAGT 58.484 37.037 0.00 0.00 0.00 2.57
7095 8361 8.516234 ACCGTGATATAAGAGCTGAAATACTAG 58.484 37.037 0.00 0.00 0.00 2.57
7096 8362 8.405418 ACCGTGATATAAGAGCTGAAATACTA 57.595 34.615 0.00 0.00 0.00 1.82
7097 8363 7.291411 ACCGTGATATAAGAGCTGAAATACT 57.709 36.000 0.00 0.00 0.00 2.12
7098 8364 7.273815 GCTACCGTGATATAAGAGCTGAAATAC 59.726 40.741 0.00 0.00 0.00 1.89
7099 8365 7.039993 TGCTACCGTGATATAAGAGCTGAAATA 60.040 37.037 0.00 0.00 0.00 1.40
7100 8366 6.159988 GCTACCGTGATATAAGAGCTGAAAT 58.840 40.000 0.00 0.00 0.00 2.17
7101 8367 5.068591 TGCTACCGTGATATAAGAGCTGAAA 59.931 40.000 0.00 0.00 0.00 2.69
7102 8368 4.583073 TGCTACCGTGATATAAGAGCTGAA 59.417 41.667 0.00 0.00 0.00 3.02
7103 8369 4.023107 GTGCTACCGTGATATAAGAGCTGA 60.023 45.833 0.00 0.00 0.00 4.26
7104 8370 4.230657 GTGCTACCGTGATATAAGAGCTG 58.769 47.826 0.00 0.00 0.00 4.24
7105 8371 3.889538 TGTGCTACCGTGATATAAGAGCT 59.110 43.478 0.00 0.00 0.00 4.09
7106 8372 4.238761 TGTGCTACCGTGATATAAGAGC 57.761 45.455 0.00 0.00 0.00 4.09
7107 8373 6.923508 TCATTTGTGCTACCGTGATATAAGAG 59.076 38.462 0.00 0.00 0.00 2.85
7108 8374 6.700081 GTCATTTGTGCTACCGTGATATAAGA 59.300 38.462 0.00 0.00 0.00 2.10
7109 8375 6.701841 AGTCATTTGTGCTACCGTGATATAAG 59.298 38.462 0.00 0.00 0.00 1.73
7110 8376 6.478673 CAGTCATTTGTGCTACCGTGATATAA 59.521 38.462 0.00 0.00 0.00 0.98
7111 8377 5.983118 CAGTCATTTGTGCTACCGTGATATA 59.017 40.000 0.00 0.00 0.00 0.86
7112 8378 4.811024 CAGTCATTTGTGCTACCGTGATAT 59.189 41.667 0.00 0.00 0.00 1.63
7113 8379 4.180817 CAGTCATTTGTGCTACCGTGATA 58.819 43.478 0.00 0.00 0.00 2.15
7114 8380 3.002791 CAGTCATTTGTGCTACCGTGAT 58.997 45.455 0.00 0.00 0.00 3.06
7115 8381 2.224185 ACAGTCATTTGTGCTACCGTGA 60.224 45.455 0.00 0.00 0.00 4.35
7116 8382 2.143122 ACAGTCATTTGTGCTACCGTG 58.857 47.619 0.00 0.00 0.00 4.94
7117 8383 2.543777 ACAGTCATTTGTGCTACCGT 57.456 45.000 0.00 0.00 0.00 4.83
7118 8384 2.095768 CCAACAGTCATTTGTGCTACCG 60.096 50.000 0.00 0.00 0.00 4.02
7119 8385 2.884639 ACCAACAGTCATTTGTGCTACC 59.115 45.455 0.00 0.00 0.00 3.18
7120 8386 5.682943 TTACCAACAGTCATTTGTGCTAC 57.317 39.130 0.00 0.00 0.00 3.58
7121 8387 5.825679 ACTTTACCAACAGTCATTTGTGCTA 59.174 36.000 0.00 0.00 0.00 3.49
7122 8388 4.644685 ACTTTACCAACAGTCATTTGTGCT 59.355 37.500 0.00 0.00 0.00 4.40
7123 8389 4.739716 CACTTTACCAACAGTCATTTGTGC 59.260 41.667 0.00 0.00 0.00 4.57
7124 8390 5.067153 TCCACTTTACCAACAGTCATTTGTG 59.933 40.000 0.00 0.00 0.00 3.33
7125 8391 5.197451 TCCACTTTACCAACAGTCATTTGT 58.803 37.500 0.00 0.00 0.00 2.83
7126 8392 5.278463 CCTCCACTTTACCAACAGTCATTTG 60.278 44.000 0.00 0.00 0.00 2.32
7127 8393 4.827284 CCTCCACTTTACCAACAGTCATTT 59.173 41.667 0.00 0.00 0.00 2.32
7128 8394 4.398319 CCTCCACTTTACCAACAGTCATT 58.602 43.478 0.00 0.00 0.00 2.57
7129 8395 3.810743 GCCTCCACTTTACCAACAGTCAT 60.811 47.826 0.00 0.00 0.00 3.06
7130 8396 2.486548 GCCTCCACTTTACCAACAGTCA 60.487 50.000 0.00 0.00 0.00 3.41
7131 8397 2.152016 GCCTCCACTTTACCAACAGTC 58.848 52.381 0.00 0.00 0.00 3.51
7132 8398 1.493022 TGCCTCCACTTTACCAACAGT 59.507 47.619 0.00 0.00 0.00 3.55
7133 8399 2.270352 TGCCTCCACTTTACCAACAG 57.730 50.000 0.00 0.00 0.00 3.16
7134 8400 2.969821 ATGCCTCCACTTTACCAACA 57.030 45.000 0.00 0.00 0.00 3.33
7135 8401 3.057526 GTGAATGCCTCCACTTTACCAAC 60.058 47.826 0.00 0.00 0.00 3.77
7136 8402 3.153919 GTGAATGCCTCCACTTTACCAA 58.846 45.455 0.00 0.00 0.00 3.67
7137 8403 2.790433 GTGAATGCCTCCACTTTACCA 58.210 47.619 0.00 0.00 0.00 3.25
7138 8404 1.737793 CGTGAATGCCTCCACTTTACC 59.262 52.381 0.00 0.00 0.00 2.85
7139 8405 2.423577 ACGTGAATGCCTCCACTTTAC 58.576 47.619 0.00 0.00 0.00 2.01
7140 8406 2.851263 ACGTGAATGCCTCCACTTTA 57.149 45.000 0.00 0.00 0.00 1.85
7141 8407 1.880027 GAACGTGAATGCCTCCACTTT 59.120 47.619 0.00 0.00 0.00 2.66
7142 8408 1.523758 GAACGTGAATGCCTCCACTT 58.476 50.000 0.00 0.00 0.00 3.16
7143 8409 0.321653 GGAACGTGAATGCCTCCACT 60.322 55.000 0.00 0.00 0.00 4.00
7144 8410 2.171635 GGAACGTGAATGCCTCCAC 58.828 57.895 0.00 0.00 0.00 4.02
7145 8411 4.713946 GGAACGTGAATGCCTCCA 57.286 55.556 0.00 0.00 0.00 3.86


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.