Multiple sequence alignment - TraesCS4B01G003900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G003900 chr4B 100.000 3147 0 0 1 3147 2434353 2437499 0.000000e+00 5812.0
1 TraesCS4B01G003900 chr4B 99.239 920 7 0 1 920 476867422 476868341 0.000000e+00 1661.0
2 TraesCS4B01G003900 chr4D 92.401 1408 63 14 915 2311 2021436 2020062 0.000000e+00 1967.0
3 TraesCS4B01G003900 chr4D 87.147 389 41 5 2485 2871 2020070 2019689 1.730000e-117 433.0
4 TraesCS4B01G003900 chr4D 94.211 190 9 2 2303 2491 506103784 506103972 3.970000e-74 289.0
5 TraesCS4B01G003900 chr4A 92.551 1329 55 19 986 2311 602797596 602798883 0.000000e+00 1866.0
6 TraesCS4B01G003900 chr4A 90.625 448 31 5 1871 2311 594248580 594249023 4.520000e-163 584.0
7 TraesCS4B01G003900 chr4A 90.187 428 23 8 1884 2311 602910659 602910251 9.930000e-150 540.0
8 TraesCS4B01G003900 chr4A 93.776 241 15 0 1902 2142 594259057 594259297 2.310000e-96 363.0
9 TraesCS4B01G003900 chr4A 88.302 265 20 6 2485 2741 602800484 602800745 1.100000e-79 307.0
10 TraesCS4B01G003900 chr4A 93.714 175 11 0 1140 1314 594248399 594248573 2.410000e-66 263.0
11 TraesCS4B01G003900 chr4A 85.514 214 13 7 941 1140 594239884 594240093 1.140000e-49 207.0
12 TraesCS4B01G003900 chr4A 83.422 187 18 5 2678 2855 602799018 602799200 9.030000e-36 161.0
13 TraesCS4B01G003900 chr4A 93.333 105 7 0 1980 2084 602799952 602800056 4.200000e-34 156.0
14 TraesCS4B01G003900 chr4A 82.105 190 21 5 2681 2861 602910115 602909930 1.960000e-32 150.0
15 TraesCS4B01G003900 chr4A 95.402 87 4 0 2485 2571 602798875 602798961 4.230000e-29 139.0
16 TraesCS4B01G003900 chr4A 95.402 87 4 0 2485 2571 602910259 602910173 4.230000e-29 139.0
17 TraesCS4B01G003900 chr4A 89.362 47 3 2 916 960 602797553 602797599 1.220000e-04 58.4
18 TraesCS4B01G003900 chr1A 99.457 920 5 0 1 920 31123693 31124612 0.000000e+00 1672.0
19 TraesCS4B01G003900 chr1A 97.727 44 1 0 3100 3143 146059363 146059406 3.370000e-10 76.8
20 TraesCS4B01G003900 chr1A 93.750 48 2 1 3097 3143 146061010 146061057 1.570000e-08 71.3
21 TraesCS4B01G003900 chr5A 99.130 920 8 0 1 920 237486046 237485127 0.000000e+00 1655.0
22 TraesCS4B01G003900 chr3B 99.022 920 8 1 1 920 712107999 712107081 0.000000e+00 1648.0
23 TraesCS4B01G003900 chr3B 94.819 193 10 0 2302 2494 794325079 794324887 5.100000e-78 302.0
24 TraesCS4B01G003900 chr2A 98.913 920 10 0 1 920 125614999 125614080 0.000000e+00 1644.0
25 TraesCS4B01G003900 chr2B 93.231 916 62 0 5 920 406696455 406695540 0.000000e+00 1349.0
26 TraesCS4B01G003900 chr2B 93.909 197 9 3 2301 2496 765569966 765570160 8.540000e-76 294.0
27 TraesCS4B01G003900 chr2B 93.846 195 8 4 2303 2496 763446646 763446837 1.100000e-74 291.0
28 TraesCS4B01G003900 chr1B 93.013 916 64 0 5 920 307142385 307143300 0.000000e+00 1338.0
29 TraesCS4B01G003900 chr1B 92.670 914 67 0 7 920 45810611 45809698 0.000000e+00 1317.0
30 TraesCS4B01G003900 chr1B 93.069 202 13 1 2291 2492 613944574 613944774 8.540000e-76 294.0
31 TraesCS4B01G003900 chr6B 92.576 916 68 0 5 920 269659674 269660589 0.000000e+00 1315.0
32 TraesCS4B01G003900 chr6B 94.792 192 9 1 2306 2497 636490824 636490634 6.600000e-77 298.0
33 TraesCS4B01G003900 chrUn 93.205 677 40 5 1502 2177 47735054 47734383 0.000000e+00 990.0
34 TraesCS4B01G003900 chrUn 93.006 672 44 3 1508 2177 47865848 47866518 0.000000e+00 977.0
35 TraesCS4B01G003900 chrUn 95.528 559 21 3 915 1470 47865289 47865846 0.000000e+00 891.0
36 TraesCS4B01G003900 chrUn 94.912 570 20 4 933 1502 47735736 47735176 0.000000e+00 883.0
37 TraesCS4B01G003900 chrUn 95.402 87 4 0 2485 2571 47734302 47734216 4.230000e-29 139.0
38 TraesCS4B01G003900 chrUn 95.402 87 4 0 2485 2571 47866598 47866684 4.230000e-29 139.0
39 TraesCS4B01G003900 chrUn 93.750 64 4 0 2248 2311 47734357 47734294 2.580000e-16 97.1
40 TraesCS4B01G003900 chr5B 95.722 187 8 0 2306 2492 346616343 346616157 5.100000e-78 302.0
41 TraesCS4B01G003900 chr5B 94.211 190 11 0 2303 2492 509485252 509485063 1.100000e-74 291.0
42 TraesCS4B01G003900 chr3D 94.241 191 10 1 2302 2492 454745024 454744835 1.100000e-74 291.0
43 TraesCS4B01G003900 chr1D 97.727 44 1 0 3100 3143 13350583 13350540 3.370000e-10 76.8
44 TraesCS4B01G003900 chr2D 89.286 56 4 1 2972 3025 334275696 334275641 5.630000e-08 69.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G003900 chr4B 2434353 2437499 3146 False 5812.000000 5812 100.000000 1 3147 1 chr4B.!!$F1 3146
1 TraesCS4B01G003900 chr4B 476867422 476868341 919 False 1661.000000 1661 99.239000 1 920 1 chr4B.!!$F2 919
2 TraesCS4B01G003900 chr4D 2019689 2021436 1747 True 1200.000000 1967 89.774000 915 2871 2 chr4D.!!$R1 1956
3 TraesCS4B01G003900 chr4A 602797553 602800745 3192 False 447.900000 1866 90.395333 916 2855 6 chr4A.!!$F4 1939
4 TraesCS4B01G003900 chr4A 594248399 594249023 624 False 423.500000 584 92.169500 1140 2311 2 chr4A.!!$F3 1171
5 TraesCS4B01G003900 chr4A 602909930 602910659 729 True 276.333333 540 89.231333 1884 2861 3 chr4A.!!$R1 977
6 TraesCS4B01G003900 chr1A 31123693 31124612 919 False 1672.000000 1672 99.457000 1 920 1 chr1A.!!$F1 919
7 TraesCS4B01G003900 chr5A 237485127 237486046 919 True 1655.000000 1655 99.130000 1 920 1 chr5A.!!$R1 919
8 TraesCS4B01G003900 chr3B 712107081 712107999 918 True 1648.000000 1648 99.022000 1 920 1 chr3B.!!$R1 919
9 TraesCS4B01G003900 chr2A 125614080 125614999 919 True 1644.000000 1644 98.913000 1 920 1 chr2A.!!$R1 919
10 TraesCS4B01G003900 chr2B 406695540 406696455 915 True 1349.000000 1349 93.231000 5 920 1 chr2B.!!$R1 915
11 TraesCS4B01G003900 chr1B 307142385 307143300 915 False 1338.000000 1338 93.013000 5 920 1 chr1B.!!$F1 915
12 TraesCS4B01G003900 chr1B 45809698 45810611 913 True 1317.000000 1317 92.670000 7 920 1 chr1B.!!$R1 913
13 TraesCS4B01G003900 chr6B 269659674 269660589 915 False 1315.000000 1315 92.576000 5 920 1 chr6B.!!$F1 915
14 TraesCS4B01G003900 chrUn 47865289 47866684 1395 False 669.000000 977 94.645333 915 2571 3 chrUn.!!$F1 1656
15 TraesCS4B01G003900 chrUn 47734216 47735736 1520 True 527.275000 990 94.317250 933 2571 4 chrUn.!!$R1 1638

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
929 930 0.987294 ATGCCAGCACCAACTACTCT 59.013 50.0 0.0 0.0 0.0 3.24 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2827 4598 0.180406 AGTTAGTTAGGCATGGGGCG 59.82 55.0 0.0 0.0 46.16 6.13 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
251 252 5.985530 TCGTGCTCCATAAAGATGATTGTAG 59.014 40.000 0.00 0.00 34.73 2.74
564 565 3.431766 GGCCACTTGACCTTATCATACGT 60.432 47.826 0.00 0.00 37.11 3.57
927 928 2.292828 AAATGCCAGCACCAACTACT 57.707 45.000 0.00 0.00 0.00 2.57
928 929 1.826385 AATGCCAGCACCAACTACTC 58.174 50.000 0.00 0.00 0.00 2.59
929 930 0.987294 ATGCCAGCACCAACTACTCT 59.013 50.000 0.00 0.00 0.00 3.24
931 932 1.160137 GCCAGCACCAACTACTCTTG 58.840 55.000 0.00 0.00 0.00 3.02
1064 1067 1.450531 ATTGCCCTAATGAGCAGCGC 61.451 55.000 0.00 0.00 40.73 5.92
1206 1209 0.400213 TGTTCAAGGCCAACTCCGAT 59.600 50.000 5.01 0.00 0.00 4.18
1497 1507 0.719465 CATGCACGTTCCTTACCGTC 59.281 55.000 0.00 0.00 34.59 4.79
1498 1508 0.319083 ATGCACGTTCCTTACCGTCA 59.681 50.000 0.00 0.00 34.59 4.35
1499 1509 0.319211 TGCACGTTCCTTACCGTCAG 60.319 55.000 0.00 0.00 34.59 3.51
1500 1510 0.319297 GCACGTTCCTTACCGTCAGT 60.319 55.000 0.00 0.00 34.59 3.41
1603 1736 3.602513 CTTCTCTGCGGTGGCTGCT 62.603 63.158 0.00 0.00 40.82 4.24
1687 1820 1.669115 CTGCACCACCGAGAACCAG 60.669 63.158 0.00 0.00 0.00 4.00
1737 1870 3.489398 GCCTTCGAGTACATAGTGGACAG 60.489 52.174 0.00 0.00 32.29 3.51
1798 1931 2.345244 CAAGGCAGGTGCGACTCT 59.655 61.111 0.00 0.00 43.26 3.24
1807 1940 1.374631 GTGCGACTCTGATGCCACA 60.375 57.895 0.00 0.00 0.00 4.17
1834 1967 2.111878 GCCACCATCAGCGGCTAT 59.888 61.111 0.26 0.00 42.78 2.97
2123 2256 2.945984 CTTGCGGCGTTGACATGT 59.054 55.556 9.37 0.00 0.00 3.21
2128 2261 2.616330 CGGCGTTGACATGTTGGCT 61.616 57.895 0.00 0.00 0.00 4.75
2154 2287 0.447801 CCTGTTGCATGAACCTACGC 59.552 55.000 0.00 0.00 33.07 4.42
2212 2348 6.377245 ACCCCTAGTAGTAGTAGATGCTAG 57.623 45.833 12.83 0.00 0.00 3.42
2251 2391 1.089920 ACAACCTGATCAAGCGCATC 58.910 50.000 11.47 4.46 0.00 3.91
2298 2443 2.483889 GGGCACTCCTAGCTGTAACATC 60.484 54.545 0.00 0.00 0.00 3.06
2311 2456 7.145932 AGCTGTAACATCAGATTGTTTTACC 57.854 36.000 0.00 0.00 40.25 2.85
2312 2457 6.714810 AGCTGTAACATCAGATTGTTTTACCA 59.285 34.615 0.00 0.00 40.25 3.25
2313 2458 7.023575 GCTGTAACATCAGATTGTTTTACCAG 58.976 38.462 4.26 0.00 40.25 4.00
2314 2459 7.308589 GCTGTAACATCAGATTGTTTTACCAGT 60.309 37.037 4.26 0.00 40.25 4.00
2315 2460 8.458573 TGTAACATCAGATTGTTTTACCAGTT 57.541 30.769 4.26 0.00 40.25 3.16
2316 2461 8.908903 TGTAACATCAGATTGTTTTACCAGTTT 58.091 29.630 4.26 0.00 40.25 2.66
2317 2462 9.744468 GTAACATCAGATTGTTTTACCAGTTTT 57.256 29.630 4.26 0.00 40.25 2.43
2318 2463 8.647143 AACATCAGATTGTTTTACCAGTTTTG 57.353 30.769 0.00 0.00 36.43 2.44
2319 2464 6.701400 ACATCAGATTGTTTTACCAGTTTTGC 59.299 34.615 0.00 0.00 0.00 3.68
2320 2465 6.463995 TCAGATTGTTTTACCAGTTTTGCT 57.536 33.333 0.00 0.00 0.00 3.91
2321 2466 7.575414 TCAGATTGTTTTACCAGTTTTGCTA 57.425 32.000 0.00 0.00 0.00 3.49
2322 2467 7.648142 TCAGATTGTTTTACCAGTTTTGCTAG 58.352 34.615 0.00 0.00 0.00 3.42
2323 2468 7.500892 TCAGATTGTTTTACCAGTTTTGCTAGA 59.499 33.333 0.00 0.00 0.00 2.43
2324 2469 8.134895 CAGATTGTTTTACCAGTTTTGCTAGAA 58.865 33.333 0.00 0.00 0.00 2.10
2325 2470 8.135529 AGATTGTTTTACCAGTTTTGCTAGAAC 58.864 33.333 0.00 0.00 0.00 3.01
2326 2471 7.399245 TTGTTTTACCAGTTTTGCTAGAACT 57.601 32.000 0.00 0.00 37.82 3.01
2327 2472 7.023197 TGTTTTACCAGTTTTGCTAGAACTC 57.977 36.000 0.00 0.00 35.26 3.01
2328 2473 6.600032 TGTTTTACCAGTTTTGCTAGAACTCA 59.400 34.615 0.00 0.00 35.26 3.41
2329 2474 7.284489 TGTTTTACCAGTTTTGCTAGAACTCAT 59.716 33.333 0.00 0.00 35.26 2.90
2330 2475 7.435068 TTTACCAGTTTTGCTAGAACTCATC 57.565 36.000 0.00 0.00 35.26 2.92
2331 2476 5.234466 ACCAGTTTTGCTAGAACTCATCT 57.766 39.130 0.00 0.00 42.48 2.90
2332 2477 6.360370 ACCAGTTTTGCTAGAACTCATCTA 57.640 37.500 0.00 0.00 39.71 1.98
2352 2497 9.913310 TCATCTAGATGAGATATAATTCGGTCT 57.087 33.333 27.93 0.00 43.52 3.85
2360 2505 7.378966 TGAGATATAATTCGGTCTCATTCACC 58.621 38.462 10.72 0.00 41.40 4.02
2361 2506 7.233553 TGAGATATAATTCGGTCTCATTCACCT 59.766 37.037 10.72 0.00 41.40 4.00
2362 2507 7.967908 AGATATAATTCGGTCTCATTCACCTT 58.032 34.615 0.00 0.00 0.00 3.50
2363 2508 8.432805 AGATATAATTCGGTCTCATTCACCTTT 58.567 33.333 0.00 0.00 0.00 3.11
2364 2509 8.980481 ATATAATTCGGTCTCATTCACCTTTT 57.020 30.769 0.00 0.00 0.00 2.27
2366 2511 8.980481 ATAATTCGGTCTCATTCACCTTTTAT 57.020 30.769 0.00 0.00 0.00 1.40
2368 2513 8.438676 AATTCGGTCTCATTCACCTTTTATAG 57.561 34.615 0.00 0.00 0.00 1.31
2369 2514 5.357257 TCGGTCTCATTCACCTTTTATAGC 58.643 41.667 0.00 0.00 0.00 2.97
2370 2515 4.511826 CGGTCTCATTCACCTTTTATAGCC 59.488 45.833 0.00 0.00 0.00 3.93
2371 2516 5.437060 GGTCTCATTCACCTTTTATAGCCA 58.563 41.667 0.00 0.00 0.00 4.75
2372 2517 6.064717 GGTCTCATTCACCTTTTATAGCCAT 58.935 40.000 0.00 0.00 0.00 4.40
2373 2518 6.547510 GGTCTCATTCACCTTTTATAGCCATT 59.452 38.462 0.00 0.00 0.00 3.16
2374 2519 7.420800 GTCTCATTCACCTTTTATAGCCATTG 58.579 38.462 0.00 0.00 0.00 2.82
2375 2520 6.547141 TCTCATTCACCTTTTATAGCCATTGG 59.453 38.462 0.00 0.00 0.00 3.16
2376 2521 6.430864 TCATTCACCTTTTATAGCCATTGGA 58.569 36.000 6.95 0.00 0.00 3.53
2377 2522 7.068702 TCATTCACCTTTTATAGCCATTGGAT 58.931 34.615 6.95 1.78 0.00 3.41
2378 2523 8.224025 TCATTCACCTTTTATAGCCATTGGATA 58.776 33.333 6.95 4.68 0.00 2.59
2379 2524 9.028284 CATTCACCTTTTATAGCCATTGGATAT 57.972 33.333 17.09 17.09 37.99 1.63
2380 2525 8.408043 TTCACCTTTTATAGCCATTGGATATG 57.592 34.615 21.07 8.35 34.94 1.78
2381 2526 7.754624 TCACCTTTTATAGCCATTGGATATGA 58.245 34.615 21.07 11.91 34.94 2.15
2382 2527 8.393259 TCACCTTTTATAGCCATTGGATATGAT 58.607 33.333 21.07 2.11 34.94 2.45
2383 2528 8.464404 CACCTTTTATAGCCATTGGATATGATG 58.536 37.037 21.07 12.10 34.94 3.07
2384 2529 7.123247 ACCTTTTATAGCCATTGGATATGATGC 59.877 37.037 21.07 0.00 34.94 3.91
2385 2530 7.341256 CCTTTTATAGCCATTGGATATGATGCT 59.659 37.037 21.07 4.64 34.94 3.79
2386 2531 9.399797 CTTTTATAGCCATTGGATATGATGCTA 57.600 33.333 21.07 6.59 34.94 3.49
2387 2532 9.925545 TTTTATAGCCATTGGATATGATGCTAT 57.074 29.630 21.07 12.50 34.94 2.97
2391 2536 7.204243 AGCCATTGGATATGATGCTATAAGA 57.796 36.000 6.95 0.00 0.00 2.10
2392 2537 7.813331 AGCCATTGGATATGATGCTATAAGAT 58.187 34.615 6.95 0.00 0.00 2.40
2393 2538 7.720074 AGCCATTGGATATGATGCTATAAGATG 59.280 37.037 6.95 0.00 0.00 2.90
2394 2539 7.521748 GCCATTGGATATGATGCTATAAGATGC 60.522 40.741 6.95 0.00 0.00 3.91
2395 2540 7.307811 CCATTGGATATGATGCTATAAGATGCG 60.308 40.741 0.00 0.00 0.00 4.73
2396 2541 6.225981 TGGATATGATGCTATAAGATGCGT 57.774 37.500 0.00 0.00 0.00 5.24
2397 2542 6.044682 TGGATATGATGCTATAAGATGCGTG 58.955 40.000 0.00 0.00 0.00 5.34
2398 2543 6.045318 GGATATGATGCTATAAGATGCGTGT 58.955 40.000 0.00 0.00 0.00 4.49
2399 2544 6.019237 GGATATGATGCTATAAGATGCGTGTG 60.019 42.308 0.00 0.00 0.00 3.82
2400 2545 4.058721 TGATGCTATAAGATGCGTGTGT 57.941 40.909 0.00 0.00 0.00 3.72
2401 2546 3.803778 TGATGCTATAAGATGCGTGTGTG 59.196 43.478 0.00 0.00 0.00 3.82
2402 2547 1.933181 TGCTATAAGATGCGTGTGTGC 59.067 47.619 0.00 0.00 0.00 4.57
2403 2548 2.205074 GCTATAAGATGCGTGTGTGCT 58.795 47.619 0.00 0.00 35.36 4.40
2404 2549 2.033407 GCTATAAGATGCGTGTGTGCTG 60.033 50.000 0.00 0.00 35.36 4.41
2405 2550 2.385013 ATAAGATGCGTGTGTGCTGA 57.615 45.000 0.00 0.00 35.36 4.26
2406 2551 1.428448 TAAGATGCGTGTGTGCTGAC 58.572 50.000 0.00 0.00 35.36 3.51
2407 2552 1.560004 AAGATGCGTGTGTGCTGACG 61.560 55.000 0.00 0.00 38.63 4.35
2408 2553 2.280119 ATGCGTGTGTGCTGACGT 60.280 55.556 0.00 0.00 37.89 4.34
2409 2554 2.484631 GATGCGTGTGTGCTGACGTG 62.485 60.000 0.00 0.00 37.89 4.49
2410 2555 4.000557 GCGTGTGTGCTGACGTGG 62.001 66.667 0.00 0.00 37.89 4.94
2411 2556 3.337889 CGTGTGTGCTGACGTGGG 61.338 66.667 0.00 0.00 0.00 4.61
2412 2557 2.203015 GTGTGTGCTGACGTGGGT 60.203 61.111 0.00 0.00 0.00 4.51
2413 2558 1.817941 GTGTGTGCTGACGTGGGTT 60.818 57.895 0.00 0.00 0.00 4.11
2414 2559 1.817520 TGTGTGCTGACGTGGGTTG 60.818 57.895 0.00 0.00 0.00 3.77
2415 2560 1.817941 GTGTGCTGACGTGGGTTGT 60.818 57.895 0.00 0.00 0.00 3.32
2416 2561 0.531090 GTGTGCTGACGTGGGTTGTA 60.531 55.000 0.00 0.00 0.00 2.41
2417 2562 0.394938 TGTGCTGACGTGGGTTGTAT 59.605 50.000 0.00 0.00 0.00 2.29
2418 2563 1.076332 GTGCTGACGTGGGTTGTATC 58.924 55.000 0.00 0.00 0.00 2.24
2419 2564 0.973632 TGCTGACGTGGGTTGTATCT 59.026 50.000 0.00 0.00 0.00 1.98
2420 2565 1.337728 TGCTGACGTGGGTTGTATCTG 60.338 52.381 0.00 0.00 0.00 2.90
2421 2566 1.337823 GCTGACGTGGGTTGTATCTGT 60.338 52.381 0.00 0.00 0.00 3.41
2422 2567 2.870435 GCTGACGTGGGTTGTATCTGTT 60.870 50.000 0.00 0.00 0.00 3.16
2423 2568 3.399330 CTGACGTGGGTTGTATCTGTTT 58.601 45.455 0.00 0.00 0.00 2.83
2424 2569 3.811083 TGACGTGGGTTGTATCTGTTTT 58.189 40.909 0.00 0.00 0.00 2.43
2425 2570 4.200874 TGACGTGGGTTGTATCTGTTTTT 58.799 39.130 0.00 0.00 0.00 1.94
2426 2571 4.035792 TGACGTGGGTTGTATCTGTTTTTG 59.964 41.667 0.00 0.00 0.00 2.44
2427 2572 3.949113 ACGTGGGTTGTATCTGTTTTTGT 59.051 39.130 0.00 0.00 0.00 2.83
2428 2573 4.399934 ACGTGGGTTGTATCTGTTTTTGTT 59.600 37.500 0.00 0.00 0.00 2.83
2429 2574 5.105675 ACGTGGGTTGTATCTGTTTTTGTTT 60.106 36.000 0.00 0.00 0.00 2.83
2430 2575 5.808030 CGTGGGTTGTATCTGTTTTTGTTTT 59.192 36.000 0.00 0.00 0.00 2.43
2431 2576 6.020201 CGTGGGTTGTATCTGTTTTTGTTTTC 60.020 38.462 0.00 0.00 0.00 2.29
2432 2577 6.814146 GTGGGTTGTATCTGTTTTTGTTTTCA 59.186 34.615 0.00 0.00 0.00 2.69
2433 2578 7.332182 GTGGGTTGTATCTGTTTTTGTTTTCAA 59.668 33.333 0.00 0.00 38.10 2.69
2434 2579 7.878127 TGGGTTGTATCTGTTTTTGTTTTCAAA 59.122 29.630 0.00 0.00 46.39 2.69
2447 2592 7.969536 TTTGTTTTCAAAGTGAATGAAACCA 57.030 28.000 1.48 0.00 44.14 3.67
2448 2593 7.969536 TTGTTTTCAAAGTGAATGAAACCAA 57.030 28.000 7.57 7.57 42.83 3.67
2449 2594 7.969536 TGTTTTCAAAGTGAATGAAACCAAA 57.030 28.000 1.48 0.00 44.14 3.28
2450 2595 8.558973 TGTTTTCAAAGTGAATGAAACCAAAT 57.441 26.923 1.48 0.00 44.14 2.32
2451 2596 9.007901 TGTTTTCAAAGTGAATGAAACCAAATT 57.992 25.926 1.48 0.00 44.14 1.82
2482 2627 8.466617 TCATCTAAATGAGTTCTAGGTACTCC 57.533 38.462 17.72 6.18 41.02 3.85
2483 2628 7.506261 TCATCTAAATGAGTTCTAGGTACTCCC 59.494 40.741 17.72 2.30 41.02 4.30
2484 2629 7.507616 CATCTAAATGAGTTCTAGGTACTCCCT 59.492 40.741 17.72 7.45 41.02 4.20
2485 2630 7.420029 TCTAAATGAGTTCTAGGTACTCCCTT 58.580 38.462 17.72 14.06 42.73 3.95
2486 2631 5.941555 AATGAGTTCTAGGTACTCCCTTG 57.058 43.478 17.72 0.00 42.73 3.61
2537 4291 6.764379 TGAGCGATTATTTGTACCATCCATA 58.236 36.000 0.00 0.00 0.00 2.74
2572 4326 8.456904 TTCGACACTGTACTATATGTTTCAAC 57.543 34.615 0.00 0.00 0.00 3.18
2573 4327 7.595604 TCGACACTGTACTATATGTTTCAACA 58.404 34.615 0.00 0.00 44.06 3.33
2601 4361 4.607293 AGAGTGCTTTGTACATGTGAGA 57.393 40.909 9.11 0.00 0.00 3.27
2602 4362 4.564041 AGAGTGCTTTGTACATGTGAGAG 58.436 43.478 9.11 0.80 0.00 3.20
2670 4431 2.086869 CGCCAGAACATCATGGTCTTT 58.913 47.619 1.05 0.00 42.87 2.52
2691 4452 2.359975 GAGGCCCCTGTTCCGTTG 60.360 66.667 0.00 0.00 0.00 4.10
2693 4454 4.280019 GGCCCCTGTTCCGTTGGT 62.280 66.667 0.00 0.00 0.00 3.67
2727 4492 4.853924 ATTTCAGCATGGAAAGAACGTT 57.146 36.364 0.00 0.00 36.98 3.99
2742 4511 6.927294 AAGAACGTTGGGAATGATAAGATC 57.073 37.500 5.00 0.00 0.00 2.75
2774 4543 1.756024 CCAAACTACCCACGGTCCA 59.244 57.895 0.00 0.00 37.09 4.02
2800 4570 4.393834 TGAAAATGTCAATTCCGTCAGGA 58.606 39.130 0.74 0.00 37.88 3.86
2812 4582 2.076863 CCGTCAGGAAAAGATGTCACC 58.923 52.381 0.00 0.00 41.02 4.02
2814 4584 2.738846 CGTCAGGAAAAGATGTCACCAG 59.261 50.000 0.00 0.00 0.00 4.00
2827 4598 0.892755 TCACCAGTGTCATACGGGAC 59.107 55.000 0.00 0.00 46.29 4.46
2841 4612 2.516225 GGACGCCCCATGCCTAAC 60.516 66.667 0.00 0.00 36.24 2.34
2842 4613 2.590092 GACGCCCCATGCCTAACT 59.410 61.111 0.00 0.00 36.24 2.24
2871 4642 1.256812 CATCCGGGCTGGTTCTTTTT 58.743 50.000 13.14 0.00 39.52 1.94
2872 4643 1.067635 CATCCGGGCTGGTTCTTTTTG 60.068 52.381 13.14 0.00 39.52 2.44
2873 4644 0.106419 TCCGGGCTGGTTCTTTTTGT 60.106 50.000 13.14 0.00 39.52 2.83
2874 4645 0.031994 CCGGGCTGGTTCTTTTTGTG 59.968 55.000 3.48 0.00 0.00 3.33
2875 4646 0.597377 CGGGCTGGTTCTTTTTGTGC 60.597 55.000 0.00 0.00 0.00 4.57
2876 4647 0.752658 GGGCTGGTTCTTTTTGTGCT 59.247 50.000 0.00 0.00 0.00 4.40
2877 4648 1.269778 GGGCTGGTTCTTTTTGTGCTC 60.270 52.381 0.00 0.00 0.00 4.26
2878 4649 1.408702 GGCTGGTTCTTTTTGTGCTCA 59.591 47.619 0.00 0.00 0.00 4.26
2879 4650 2.159114 GGCTGGTTCTTTTTGTGCTCAA 60.159 45.455 0.00 0.00 0.00 3.02
2880 4651 3.118542 GCTGGTTCTTTTTGTGCTCAAG 58.881 45.455 0.98 0.00 34.88 3.02
2881 4652 3.429410 GCTGGTTCTTTTTGTGCTCAAGT 60.429 43.478 0.98 0.00 34.88 3.16
2882 4653 4.747810 CTGGTTCTTTTTGTGCTCAAGTT 58.252 39.130 0.98 0.00 34.88 2.66
2883 4654 4.743493 TGGTTCTTTTTGTGCTCAAGTTC 58.257 39.130 0.98 0.00 34.88 3.01
2884 4655 4.112634 GGTTCTTTTTGTGCTCAAGTTCC 58.887 43.478 0.98 0.00 34.88 3.62
2885 4656 4.381505 GGTTCTTTTTGTGCTCAAGTTCCA 60.382 41.667 0.98 0.00 34.88 3.53
2886 4657 5.167845 GTTCTTTTTGTGCTCAAGTTCCAA 58.832 37.500 0.98 0.00 34.88 3.53
2887 4658 4.997565 TCTTTTTGTGCTCAAGTTCCAAG 58.002 39.130 0.98 1.97 34.88 3.61
2888 4659 3.799281 TTTTGTGCTCAAGTTCCAAGG 57.201 42.857 0.98 0.00 34.88 3.61
2889 4660 2.727123 TTGTGCTCAAGTTCCAAGGA 57.273 45.000 0.00 0.00 0.00 3.36
2890 4661 1.967319 TGTGCTCAAGTTCCAAGGAC 58.033 50.000 0.00 0.00 32.60 3.85
2891 4662 1.490490 TGTGCTCAAGTTCCAAGGACT 59.510 47.619 0.00 0.00 33.11 3.85
2892 4663 2.703536 TGTGCTCAAGTTCCAAGGACTA 59.296 45.455 0.00 0.00 33.11 2.59
2893 4664 3.135712 TGTGCTCAAGTTCCAAGGACTAA 59.864 43.478 0.00 0.00 33.11 2.24
2894 4665 3.748568 GTGCTCAAGTTCCAAGGACTAAG 59.251 47.826 0.00 0.00 0.00 2.18
2895 4666 3.391296 TGCTCAAGTTCCAAGGACTAAGT 59.609 43.478 0.00 0.00 0.00 2.24
2896 4667 4.591498 TGCTCAAGTTCCAAGGACTAAGTA 59.409 41.667 0.00 0.00 0.00 2.24
2897 4668 4.930405 GCTCAAGTTCCAAGGACTAAGTAC 59.070 45.833 0.00 0.00 0.00 2.73
2898 4669 5.479124 TCAAGTTCCAAGGACTAAGTACC 57.521 43.478 0.00 0.00 0.00 3.34
2899 4670 4.903049 TCAAGTTCCAAGGACTAAGTACCA 59.097 41.667 0.00 0.00 0.00 3.25
2900 4671 5.546499 TCAAGTTCCAAGGACTAAGTACCAT 59.454 40.000 0.00 0.00 0.00 3.55
2901 4672 5.678955 AGTTCCAAGGACTAAGTACCATC 57.321 43.478 0.00 0.00 0.00 3.51
2902 4673 4.159879 AGTTCCAAGGACTAAGTACCATCG 59.840 45.833 0.00 0.00 0.00 3.84
2903 4674 3.972133 TCCAAGGACTAAGTACCATCGA 58.028 45.455 0.00 0.00 0.00 3.59
2904 4675 3.698040 TCCAAGGACTAAGTACCATCGAC 59.302 47.826 0.00 0.00 0.00 4.20
2905 4676 3.446161 CCAAGGACTAAGTACCATCGACA 59.554 47.826 0.00 0.00 0.00 4.35
2906 4677 4.081862 CCAAGGACTAAGTACCATCGACAA 60.082 45.833 0.00 0.00 0.00 3.18
2907 4678 4.985538 AGGACTAAGTACCATCGACAAG 57.014 45.455 0.00 0.00 0.00 3.16
2908 4679 3.700038 AGGACTAAGTACCATCGACAAGG 59.300 47.826 0.00 0.00 0.00 3.61
2909 4680 3.446516 GGACTAAGTACCATCGACAAGGT 59.553 47.826 10.45 10.45 41.89 3.50
2910 4681 4.421948 GACTAAGTACCATCGACAAGGTG 58.578 47.826 14.39 0.00 38.87 4.00
2911 4682 4.084287 ACTAAGTACCATCGACAAGGTGA 58.916 43.478 14.39 0.00 38.87 4.02
2912 4683 4.710375 ACTAAGTACCATCGACAAGGTGAT 59.290 41.667 14.39 5.09 38.87 3.06
2913 4684 3.802948 AGTACCATCGACAAGGTGATC 57.197 47.619 14.39 6.66 38.87 2.92
2914 4685 3.366396 AGTACCATCGACAAGGTGATCT 58.634 45.455 14.39 8.34 38.87 2.75
2915 4686 2.969628 ACCATCGACAAGGTGATCTC 57.030 50.000 5.33 0.00 36.60 2.75
2916 4687 1.482593 ACCATCGACAAGGTGATCTCC 59.517 52.381 5.64 5.64 36.60 3.71
2917 4688 1.759445 CCATCGACAAGGTGATCTCCT 59.241 52.381 10.63 10.63 39.84 3.69
2918 4689 2.959030 CCATCGACAAGGTGATCTCCTA 59.041 50.000 16.52 1.33 36.74 2.94
2919 4690 3.384789 CCATCGACAAGGTGATCTCCTAA 59.615 47.826 16.52 1.79 36.74 2.69
2920 4691 4.141937 CCATCGACAAGGTGATCTCCTAAA 60.142 45.833 16.52 2.11 36.74 1.85
2921 4692 5.453903 CCATCGACAAGGTGATCTCCTAAAT 60.454 44.000 16.52 5.55 36.74 1.40
2922 4693 5.677319 TCGACAAGGTGATCTCCTAAATT 57.323 39.130 16.52 0.00 36.74 1.82
2923 4694 5.419542 TCGACAAGGTGATCTCCTAAATTG 58.580 41.667 16.52 13.03 36.74 2.32
2924 4695 5.046591 TCGACAAGGTGATCTCCTAAATTGT 60.047 40.000 16.52 15.91 36.74 2.71
2925 4696 5.063944 CGACAAGGTGATCTCCTAAATTGTG 59.936 44.000 18.89 13.83 36.74 3.33
2926 4697 6.126863 ACAAGGTGATCTCCTAAATTGTGA 57.873 37.500 16.52 0.00 36.74 3.58
2927 4698 5.940470 ACAAGGTGATCTCCTAAATTGTGAC 59.060 40.000 16.52 0.00 36.74 3.67
2928 4699 6.176183 CAAGGTGATCTCCTAAATTGTGACT 58.824 40.000 16.52 0.00 36.74 3.41
2929 4700 6.380079 AGGTGATCTCCTAAATTGTGACTT 57.620 37.500 14.73 0.00 35.87 3.01
2930 4701 6.176183 AGGTGATCTCCTAAATTGTGACTTG 58.824 40.000 14.73 0.00 35.87 3.16
2931 4702 6.013379 AGGTGATCTCCTAAATTGTGACTTGA 60.013 38.462 14.73 0.00 35.87 3.02
2932 4703 6.655003 GGTGATCTCCTAAATTGTGACTTGAA 59.345 38.462 6.56 0.00 0.00 2.69
2933 4704 7.174946 GGTGATCTCCTAAATTGTGACTTGAAA 59.825 37.037 6.56 0.00 0.00 2.69
2934 4705 8.567948 GTGATCTCCTAAATTGTGACTTGAAAA 58.432 33.333 0.00 0.00 0.00 2.29
2949 4720 4.398319 CTTGAAAAGGGGAAGCTCTTACA 58.602 43.478 0.00 0.00 41.27 2.41
2950 4721 3.751518 TGAAAAGGGGAAGCTCTTACAC 58.248 45.455 0.00 0.00 0.00 2.90
2951 4722 3.137544 TGAAAAGGGGAAGCTCTTACACA 59.862 43.478 0.00 0.00 0.00 3.72
2952 4723 4.202567 TGAAAAGGGGAAGCTCTTACACAT 60.203 41.667 0.00 0.00 0.00 3.21
2953 4724 3.356529 AAGGGGAAGCTCTTACACATG 57.643 47.619 0.00 0.00 0.00 3.21
2954 4725 1.561542 AGGGGAAGCTCTTACACATGG 59.438 52.381 0.00 0.00 0.00 3.66
2955 4726 1.383523 GGGAAGCTCTTACACATGGC 58.616 55.000 0.00 0.00 0.00 4.40
2956 4727 1.340017 GGGAAGCTCTTACACATGGCA 60.340 52.381 0.00 0.00 0.00 4.92
2957 4728 2.436417 GGAAGCTCTTACACATGGCAA 58.564 47.619 0.00 0.00 0.00 4.52
2958 4729 2.819608 GGAAGCTCTTACACATGGCAAA 59.180 45.455 0.00 0.00 0.00 3.68
2959 4730 3.119708 GGAAGCTCTTACACATGGCAAAG 60.120 47.826 0.00 0.00 0.00 2.77
2960 4731 1.815003 AGCTCTTACACATGGCAAAGC 59.185 47.619 0.00 0.00 0.00 3.51
2961 4732 1.541147 GCTCTTACACATGGCAAAGCA 59.459 47.619 0.00 0.00 0.00 3.91
2962 4733 2.669391 GCTCTTACACATGGCAAAGCAC 60.669 50.000 0.00 0.00 0.00 4.40
2963 4734 2.553602 CTCTTACACATGGCAAAGCACA 59.446 45.455 0.00 0.00 0.00 4.57
2964 4735 3.156293 TCTTACACATGGCAAAGCACAT 58.844 40.909 0.00 0.00 0.00 3.21
2966 4737 0.319083 ACACATGGCAAAGCACATGG 59.681 50.000 18.06 12.25 46.60 3.66
2967 4738 0.319083 CACATGGCAAAGCACATGGT 59.681 50.000 18.06 7.19 46.60 3.55
2968 4739 1.050204 ACATGGCAAAGCACATGGTT 58.950 45.000 18.06 0.00 46.60 3.67
2969 4740 1.001181 ACATGGCAAAGCACATGGTTC 59.999 47.619 18.06 0.00 46.60 3.62
2970 4741 1.274167 CATGGCAAAGCACATGGTTCT 59.726 47.619 0.00 0.00 40.50 3.01
2971 4742 0.961019 TGGCAAAGCACATGGTTCTC 59.039 50.000 0.00 0.00 34.26 2.87
2972 4743 0.244721 GGCAAAGCACATGGTTCTCC 59.755 55.000 0.00 0.00 34.26 3.71
2973 4744 1.251251 GCAAAGCACATGGTTCTCCT 58.749 50.000 0.00 0.00 34.26 3.69
2974 4745 1.615392 GCAAAGCACATGGTTCTCCTT 59.385 47.619 0.00 0.00 34.26 3.36
2975 4746 2.819608 GCAAAGCACATGGTTCTCCTTA 59.180 45.455 0.00 0.00 34.26 2.69
2976 4747 3.119708 GCAAAGCACATGGTTCTCCTTAG 60.120 47.826 0.00 0.00 34.26 2.18
2977 4748 4.074970 CAAAGCACATGGTTCTCCTTAGT 58.925 43.478 0.00 0.00 34.26 2.24
2978 4749 3.618690 AGCACATGGTTCTCCTTAGTC 57.381 47.619 0.00 0.00 34.23 2.59
2979 4750 2.906389 AGCACATGGTTCTCCTTAGTCA 59.094 45.455 0.00 0.00 34.23 3.41
2980 4751 3.327757 AGCACATGGTTCTCCTTAGTCAA 59.672 43.478 0.00 0.00 34.23 3.18
2981 4752 4.018960 AGCACATGGTTCTCCTTAGTCAAT 60.019 41.667 0.00 0.00 34.23 2.57
2982 4753 4.702131 GCACATGGTTCTCCTTAGTCAATT 59.298 41.667 0.00 0.00 34.23 2.32
2983 4754 5.880332 GCACATGGTTCTCCTTAGTCAATTA 59.120 40.000 0.00 0.00 34.23 1.40
2984 4755 6.543831 GCACATGGTTCTCCTTAGTCAATTAT 59.456 38.462 0.00 0.00 34.23 1.28
2985 4756 7.067494 GCACATGGTTCTCCTTAGTCAATTATT 59.933 37.037 0.00 0.00 34.23 1.40
2986 4757 8.960591 CACATGGTTCTCCTTAGTCAATTATTT 58.039 33.333 0.00 0.00 34.23 1.40
2987 4758 9.178758 ACATGGTTCTCCTTAGTCAATTATTTC 57.821 33.333 0.00 0.00 34.23 2.17
2988 4759 8.624776 CATGGTTCTCCTTAGTCAATTATTTCC 58.375 37.037 0.00 0.00 34.23 3.13
2989 4760 7.695055 TGGTTCTCCTTAGTCAATTATTTCCA 58.305 34.615 0.00 0.00 34.23 3.53
2990 4761 7.610305 TGGTTCTCCTTAGTCAATTATTTCCAC 59.390 37.037 0.00 0.00 34.23 4.02
2991 4762 7.829706 GGTTCTCCTTAGTCAATTATTTCCACT 59.170 37.037 0.00 0.00 0.00 4.00
2992 4763 8.669243 GTTCTCCTTAGTCAATTATTTCCACTG 58.331 37.037 0.00 0.00 0.00 3.66
2993 4764 6.823689 TCTCCTTAGTCAATTATTTCCACTGC 59.176 38.462 0.00 0.00 0.00 4.40
2994 4765 6.721318 TCCTTAGTCAATTATTTCCACTGCT 58.279 36.000 0.00 0.00 0.00 4.24
2995 4766 6.599244 TCCTTAGTCAATTATTTCCACTGCTG 59.401 38.462 0.00 0.00 0.00 4.41
2996 4767 4.708726 AGTCAATTATTTCCACTGCTGC 57.291 40.909 0.00 0.00 0.00 5.25
2997 4768 4.081406 AGTCAATTATTTCCACTGCTGCA 58.919 39.130 0.88 0.88 0.00 4.41
2998 4769 4.157289 AGTCAATTATTTCCACTGCTGCAG 59.843 41.667 27.02 27.02 37.52 4.41
2999 4770 4.156556 GTCAATTATTTCCACTGCTGCAGA 59.843 41.667 34.28 13.42 35.18 4.26
3000 4771 4.766373 TCAATTATTTCCACTGCTGCAGAA 59.234 37.500 34.28 18.91 35.18 3.02
3001 4772 5.243507 TCAATTATTTCCACTGCTGCAGAAA 59.756 36.000 34.28 23.67 35.18 2.52
3002 4773 5.726980 ATTATTTCCACTGCTGCAGAAAA 57.273 34.783 34.28 26.74 35.18 2.29
3003 4774 3.655276 ATTTCCACTGCTGCAGAAAAG 57.345 42.857 34.28 19.55 35.18 2.27
3004 4775 1.321474 TTCCACTGCTGCAGAAAAGG 58.679 50.000 34.28 26.11 35.18 3.11
3005 4776 0.473755 TCCACTGCTGCAGAAAAGGA 59.526 50.000 34.28 27.62 35.18 3.36
3006 4777 0.595095 CCACTGCTGCAGAAAAGGAC 59.405 55.000 34.28 0.00 35.18 3.85
3007 4778 1.311859 CACTGCTGCAGAAAAGGACA 58.688 50.000 34.28 2.50 35.18 4.02
3008 4779 1.677576 CACTGCTGCAGAAAAGGACAA 59.322 47.619 34.28 0.00 35.18 3.18
3009 4780 2.295349 CACTGCTGCAGAAAAGGACAAT 59.705 45.455 34.28 6.45 35.18 2.71
3010 4781 2.961062 ACTGCTGCAGAAAAGGACAATT 59.039 40.909 34.28 5.91 35.18 2.32
3011 4782 3.385755 ACTGCTGCAGAAAAGGACAATTT 59.614 39.130 34.28 5.70 35.18 1.82
3012 4783 4.584325 ACTGCTGCAGAAAAGGACAATTTA 59.416 37.500 34.28 0.00 35.18 1.40
3013 4784 5.068987 ACTGCTGCAGAAAAGGACAATTTAA 59.931 36.000 34.28 0.00 35.18 1.52
3014 4785 5.911752 TGCTGCAGAAAAGGACAATTTAAA 58.088 33.333 20.43 0.00 0.00 1.52
3015 4786 6.344500 TGCTGCAGAAAAGGACAATTTAAAA 58.656 32.000 20.43 0.00 0.00 1.52
3016 4787 6.820656 TGCTGCAGAAAAGGACAATTTAAAAA 59.179 30.769 20.43 0.00 0.00 1.94
3017 4788 7.498570 TGCTGCAGAAAAGGACAATTTAAAAAT 59.501 29.630 20.43 0.00 0.00 1.82
3018 4789 7.799914 GCTGCAGAAAAGGACAATTTAAAAATG 59.200 33.333 20.43 0.00 0.00 2.32
3019 4790 7.638134 TGCAGAAAAGGACAATTTAAAAATGC 58.362 30.769 0.00 0.00 0.00 3.56
3020 4791 7.281774 TGCAGAAAAGGACAATTTAAAAATGCA 59.718 29.630 0.00 0.00 0.00 3.96
3021 4792 7.799914 GCAGAAAAGGACAATTTAAAAATGCAG 59.200 33.333 0.00 0.00 0.00 4.41
3022 4793 8.829612 CAGAAAAGGACAATTTAAAAATGCAGT 58.170 29.630 0.00 0.00 0.00 4.40
3023 4794 9.045223 AGAAAAGGACAATTTAAAAATGCAGTC 57.955 29.630 0.00 0.00 0.00 3.51
3024 4795 8.729805 AAAAGGACAATTTAAAAATGCAGTCA 57.270 26.923 13.34 0.00 32.12 3.41
3025 4796 8.729805 AAAGGACAATTTAAAAATGCAGTCAA 57.270 26.923 13.34 0.00 32.12 3.18
3026 4797 7.713764 AGGACAATTTAAAAATGCAGTCAAC 57.286 32.000 13.34 3.41 32.12 3.18
3027 4798 7.271511 AGGACAATTTAAAAATGCAGTCAACA 58.728 30.769 13.34 0.00 32.12 3.33
3028 4799 7.768120 AGGACAATTTAAAAATGCAGTCAACAA 59.232 29.630 13.34 0.00 32.12 2.83
3029 4800 7.850492 GGACAATTTAAAAATGCAGTCAACAAC 59.150 33.333 13.34 0.00 32.12 3.32
3030 4801 7.693020 ACAATTTAAAAATGCAGTCAACAACC 58.307 30.769 0.00 0.00 0.00 3.77
3031 4802 7.552330 ACAATTTAAAAATGCAGTCAACAACCT 59.448 29.630 0.00 0.00 0.00 3.50
3032 4803 8.397148 CAATTTAAAAATGCAGTCAACAACCTT 58.603 29.630 0.00 0.00 0.00 3.50
3033 4804 6.900568 TTAAAAATGCAGTCAACAACCTTG 57.099 33.333 0.00 0.00 0.00 3.61
3034 4805 4.470334 AAAATGCAGTCAACAACCTTGT 57.530 36.364 0.00 0.00 44.72 3.16
3047 4818 4.383173 ACAACCTTGTTAGGGAACTTACG 58.617 43.478 0.00 0.00 46.58 3.18
3048 4819 4.141642 ACAACCTTGTTAGGGAACTTACGT 60.142 41.667 0.00 0.00 46.58 3.57
3049 4820 4.694760 ACCTTGTTAGGGAACTTACGTT 57.305 40.909 0.00 0.00 46.58 3.99
3050 4821 4.635223 ACCTTGTTAGGGAACTTACGTTC 58.365 43.478 3.55 3.55 46.58 3.95
3051 4822 9.683548 ACAACCTTGTTAGGGAACTTACGTTCA 62.684 40.741 13.46 0.00 46.58 3.18
3076 4847 9.663904 CAATATTTGTAAATATGTTCCTGGTCG 57.336 33.333 9.85 0.00 39.89 4.79
3077 4848 8.974060 ATATTTGTAAATATGTTCCTGGTCGT 57.026 30.769 8.61 0.00 39.46 4.34
3078 4849 6.730960 TTTGTAAATATGTTCCTGGTCGTC 57.269 37.500 0.00 0.00 0.00 4.20
3079 4850 4.761975 TGTAAATATGTTCCTGGTCGTCC 58.238 43.478 0.00 0.00 0.00 4.79
3080 4851 3.992943 AAATATGTTCCTGGTCGTCCA 57.007 42.857 0.39 0.39 42.05 4.02
3081 4852 2.981859 ATATGTTCCTGGTCGTCCAC 57.018 50.000 0.00 0.00 39.03 4.02
3082 4853 1.634960 TATGTTCCTGGTCGTCCACA 58.365 50.000 0.00 0.00 39.03 4.17
3083 4854 0.762418 ATGTTCCTGGTCGTCCACAA 59.238 50.000 0.00 0.00 39.03 3.33
3084 4855 0.105964 TGTTCCTGGTCGTCCACAAG 59.894 55.000 0.00 0.00 39.03 3.16
3085 4856 0.391597 GTTCCTGGTCGTCCACAAGA 59.608 55.000 0.00 0.00 39.03 3.02
3086 4857 1.002087 GTTCCTGGTCGTCCACAAGAT 59.998 52.381 0.00 0.00 39.03 2.40
3087 4858 0.895530 TCCTGGTCGTCCACAAGATC 59.104 55.000 0.00 0.00 39.03 2.75
3088 4859 0.108138 CCTGGTCGTCCACAAGATCC 60.108 60.000 0.00 0.00 39.03 3.36
3089 4860 0.608130 CTGGTCGTCCACAAGATCCA 59.392 55.000 0.00 0.00 39.03 3.41
3090 4861 0.608130 TGGTCGTCCACAAGATCCAG 59.392 55.000 0.00 0.00 39.03 3.86
3091 4862 0.741221 GGTCGTCCACAAGATCCAGC 60.741 60.000 0.00 0.00 0.00 4.85
3092 4863 0.037326 GTCGTCCACAAGATCCAGCA 60.037 55.000 0.00 0.00 0.00 4.41
3093 4864 0.037326 TCGTCCACAAGATCCAGCAC 60.037 55.000 0.00 0.00 0.00 4.40
3094 4865 0.320683 CGTCCACAAGATCCAGCACA 60.321 55.000 0.00 0.00 0.00 4.57
3095 4866 1.160137 GTCCACAAGATCCAGCACAC 58.840 55.000 0.00 0.00 0.00 3.82
3096 4867 1.059098 TCCACAAGATCCAGCACACT 58.941 50.000 0.00 0.00 0.00 3.55
3097 4868 1.162698 CCACAAGATCCAGCACACTG 58.837 55.000 0.00 0.00 44.05 3.66
3098 4869 1.544093 CCACAAGATCCAGCACACTGT 60.544 52.381 0.00 0.00 42.81 3.55
3099 4870 1.534163 CACAAGATCCAGCACACTGTG 59.466 52.381 6.19 6.19 42.81 3.66
3100 4871 1.141657 ACAAGATCCAGCACACTGTGT 59.858 47.619 7.80 7.80 42.81 3.72
3108 4879 2.715005 CACACTGTGTGGTTGCCG 59.285 61.111 28.71 5.49 44.27 5.69
3109 4880 2.515991 ACACTGTGTGGTTGCCGG 60.516 61.111 13.50 0.00 37.94 6.13
3110 4881 2.203139 CACTGTGTGGTTGCCGGA 60.203 61.111 5.05 0.00 0.00 5.14
3111 4882 1.821759 CACTGTGTGGTTGCCGGAA 60.822 57.895 5.05 0.00 0.00 4.30
3112 4883 1.077357 ACTGTGTGGTTGCCGGAAA 60.077 52.632 5.05 0.00 0.00 3.13
3113 4884 1.101049 ACTGTGTGGTTGCCGGAAAG 61.101 55.000 5.05 0.00 0.00 2.62
3114 4885 2.335011 GTGTGGTTGCCGGAAAGC 59.665 61.111 17.97 17.97 0.00 3.51
3115 4886 2.124109 TGTGGTTGCCGGAAAGCA 60.124 55.556 23.39 23.39 42.17 3.91
3116 4887 1.530419 TGTGGTTGCCGGAAAGCAT 60.530 52.632 29.12 0.00 43.64 3.79
3117 4888 1.112315 TGTGGTTGCCGGAAAGCATT 61.112 50.000 29.12 0.00 43.64 3.56
3118 4889 0.667184 GTGGTTGCCGGAAAGCATTG 60.667 55.000 29.12 0.00 43.64 2.82
3119 4890 1.112315 TGGTTGCCGGAAAGCATTGT 61.112 50.000 23.39 0.00 43.64 2.71
3120 4891 0.388520 GGTTGCCGGAAAGCATTGTC 60.389 55.000 19.83 0.00 43.64 3.18
3121 4892 0.729140 GTTGCCGGAAAGCATTGTCG 60.729 55.000 5.05 0.00 43.64 4.35
3122 4893 1.861542 TTGCCGGAAAGCATTGTCGG 61.862 55.000 5.05 8.22 43.64 4.79
3123 4894 2.038269 GCCGGAAAGCATTGTCGGA 61.038 57.895 5.05 0.00 43.91 4.55
3124 4895 1.982073 GCCGGAAAGCATTGTCGGAG 61.982 60.000 5.05 0.00 43.91 4.63
3125 4896 0.673644 CCGGAAAGCATTGTCGGAGT 60.674 55.000 0.00 0.00 43.91 3.85
3126 4897 1.156736 CGGAAAGCATTGTCGGAGTT 58.843 50.000 0.00 0.00 0.00 3.01
3127 4898 1.135972 CGGAAAGCATTGTCGGAGTTG 60.136 52.381 0.00 0.00 0.00 3.16
3128 4899 1.401539 GGAAAGCATTGTCGGAGTTGC 60.402 52.381 0.00 0.00 35.34 4.17
3129 4900 0.238289 AAAGCATTGTCGGAGTTGCG 59.762 50.000 0.00 0.00 40.00 4.85
3130 4901 0.602638 AAGCATTGTCGGAGTTGCGA 60.603 50.000 0.00 0.00 40.00 5.10
3131 4902 1.132640 GCATTGTCGGAGTTGCGAC 59.867 57.895 17.54 17.54 35.87 5.19
3132 4903 1.416049 CATTGTCGGAGTTGCGACG 59.584 57.895 18.75 3.92 37.89 5.12
3133 4904 1.006571 ATTGTCGGAGTTGCGACGT 60.007 52.632 18.75 9.25 37.89 4.34
3134 4905 1.007336 ATTGTCGGAGTTGCGACGTC 61.007 55.000 18.75 5.18 37.89 4.34
3135 4906 2.050714 GTCGGAGTTGCGACGTCA 60.051 61.111 17.16 0.00 0.00 4.35
3136 4907 1.659335 GTCGGAGTTGCGACGTCAA 60.659 57.895 17.16 0.26 0.00 3.18
3137 4908 1.371267 TCGGAGTTGCGACGTCAAG 60.371 57.895 17.16 0.67 0.00 3.02
3138 4909 2.853914 GGAGTTGCGACGTCAAGC 59.146 61.111 17.16 12.36 0.00 4.01
3139 4910 1.664965 GGAGTTGCGACGTCAAGCT 60.665 57.895 17.16 10.25 0.00 3.74
3140 4911 1.618640 GGAGTTGCGACGTCAAGCTC 61.619 60.000 17.16 17.82 0.00 4.09
3141 4912 1.935065 GAGTTGCGACGTCAAGCTCG 61.935 60.000 17.16 1.57 0.00 5.03
3142 4913 2.014554 GTTGCGACGTCAAGCTCGA 61.015 57.895 17.16 0.13 31.24 4.04
3143 4914 2.014554 TTGCGACGTCAAGCTCGAC 61.015 57.895 17.16 0.00 31.24 4.20
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
3 4 3.535561 ACAAACAGAGAGTGGAAGTGTG 58.464 45.455 0.00 0.00 0.00 3.82
251 252 2.225019 CCATCCTTCAATACGCAGATGC 59.775 50.000 0.00 0.00 31.80 3.91
929 930 9.204570 GCTAATTAAGTGAGTAACAAGAGTCAA 57.795 33.333 0.00 0.00 30.60 3.18
931 932 8.989653 AGCTAATTAAGTGAGTAACAAGAGTC 57.010 34.615 0.00 0.00 0.00 3.36
1114 1117 2.362369 CCATCCACTCCTCGTGCCT 61.362 63.158 0.00 0.00 42.42 4.75
1116 1119 2.512515 GCCATCCACTCCTCGTGC 60.513 66.667 0.00 0.00 42.42 5.34
1141 1144 1.374252 CGTCCTTGTACTTGCGCCT 60.374 57.895 4.18 0.00 0.00 5.52
1206 1209 1.070786 GTTGGACCTGGCGACAAGA 59.929 57.895 0.00 0.00 42.06 3.02
1385 1395 3.535629 CTCCAGTCAACGCCCTGCA 62.536 63.158 0.00 0.00 0.00 4.41
1480 1490 0.319211 CTGACGGTAAGGAACGTGCA 60.319 55.000 0.00 0.00 44.24 4.57
1482 1492 2.227388 ACTACTGACGGTAAGGAACGTG 59.773 50.000 0.00 0.00 44.24 4.49
1484 1494 3.686726 ACTACTACTGACGGTAAGGAACG 59.313 47.826 0.00 0.00 0.00 3.95
1485 1495 6.934048 ATACTACTACTGACGGTAAGGAAC 57.066 41.667 0.00 0.00 0.00 3.62
1826 1959 2.808315 CACGACCTGATAGCCGCT 59.192 61.111 0.00 0.00 0.00 5.52
1846 1979 2.970324 GCGTCCTCGTTGTTGGCA 60.970 61.111 0.00 0.00 39.49 4.92
2107 2240 1.009108 CAACATGTCAACGCCGCAA 60.009 52.632 0.00 0.00 0.00 4.85
2123 2256 1.133637 TGCAACAGGGTAAGAAGCCAA 60.134 47.619 0.00 0.00 46.32 4.52
2128 2261 3.153919 GGTTCATGCAACAGGGTAAGAA 58.846 45.455 0.00 0.00 36.61 2.52
2190 2326 6.377245 ACTAGCATCTACTACTACTAGGGG 57.623 45.833 0.00 0.00 33.10 4.79
2192 2328 7.248743 AGGACTAGCATCTACTACTACTAGG 57.751 44.000 0.00 0.00 33.10 3.02
2251 2391 7.914346 CCTTAATAATCTCTTCAAAGCAAGCAG 59.086 37.037 0.00 0.00 0.00 4.24
2298 2443 7.648142 TCTAGCAAAACTGGTAAAACAATCTG 58.352 34.615 0.00 0.00 0.00 2.90
2326 2471 9.913310 AGACCGAATTATATCTCATCTAGATGA 57.087 33.333 29.17 29.17 44.95 2.92
2328 2473 9.913310 TGAGACCGAATTATATCTCATCTAGAT 57.087 33.333 0.00 0.00 46.95 1.98
2336 2481 7.607250 AGGTGAATGAGACCGAATTATATCTC 58.393 38.462 5.69 5.69 38.64 2.75
2337 2482 7.546250 AGGTGAATGAGACCGAATTATATCT 57.454 36.000 0.00 0.00 38.64 1.98
2338 2483 8.608844 AAAGGTGAATGAGACCGAATTATATC 57.391 34.615 0.00 0.00 38.64 1.63
2339 2484 8.980481 AAAAGGTGAATGAGACCGAATTATAT 57.020 30.769 0.00 0.00 38.64 0.86
2341 2486 8.980481 ATAAAAGGTGAATGAGACCGAATTAT 57.020 30.769 0.00 0.00 38.64 1.28
2342 2487 9.542462 CTATAAAAGGTGAATGAGACCGAATTA 57.458 33.333 0.00 0.00 38.64 1.40
2343 2488 7.012421 GCTATAAAAGGTGAATGAGACCGAATT 59.988 37.037 0.00 0.00 38.64 2.17
2344 2489 6.483640 GCTATAAAAGGTGAATGAGACCGAAT 59.516 38.462 0.00 0.00 38.64 3.34
2345 2490 5.815740 GCTATAAAAGGTGAATGAGACCGAA 59.184 40.000 0.00 0.00 38.64 4.30
2346 2491 5.357257 GCTATAAAAGGTGAATGAGACCGA 58.643 41.667 0.00 0.00 38.64 4.69
2347 2492 4.511826 GGCTATAAAAGGTGAATGAGACCG 59.488 45.833 0.00 0.00 38.64 4.79
2348 2493 5.437060 TGGCTATAAAAGGTGAATGAGACC 58.563 41.667 0.00 0.00 0.00 3.85
2349 2494 7.420800 CAATGGCTATAAAAGGTGAATGAGAC 58.579 38.462 0.00 0.00 0.00 3.36
2350 2495 6.547141 CCAATGGCTATAAAAGGTGAATGAGA 59.453 38.462 0.00 0.00 0.00 3.27
2351 2496 6.547141 TCCAATGGCTATAAAAGGTGAATGAG 59.453 38.462 0.00 0.00 0.00 2.90
2352 2497 6.430864 TCCAATGGCTATAAAAGGTGAATGA 58.569 36.000 0.00 0.00 0.00 2.57
2353 2498 6.713762 TCCAATGGCTATAAAAGGTGAATG 57.286 37.500 0.00 0.00 0.00 2.67
2354 2499 9.028284 CATATCCAATGGCTATAAAAGGTGAAT 57.972 33.333 0.00 0.00 0.00 2.57
2355 2500 8.224025 TCATATCCAATGGCTATAAAAGGTGAA 58.776 33.333 0.00 0.00 0.00 3.18
2356 2501 7.754624 TCATATCCAATGGCTATAAAAGGTGA 58.245 34.615 0.00 0.00 0.00 4.02
2357 2502 8.464404 CATCATATCCAATGGCTATAAAAGGTG 58.536 37.037 0.00 0.00 0.00 4.00
2358 2503 7.123247 GCATCATATCCAATGGCTATAAAAGGT 59.877 37.037 0.00 0.00 0.00 3.50
2359 2504 7.341256 AGCATCATATCCAATGGCTATAAAAGG 59.659 37.037 0.00 0.00 0.00 3.11
2360 2505 8.289939 AGCATCATATCCAATGGCTATAAAAG 57.710 34.615 0.00 0.00 0.00 2.27
2361 2506 9.925545 ATAGCATCATATCCAATGGCTATAAAA 57.074 29.630 0.00 0.00 0.00 1.52
2365 2510 8.942033 TCTTATAGCATCATATCCAATGGCTAT 58.058 33.333 0.00 0.00 32.32 2.97
2366 2511 8.322905 TCTTATAGCATCATATCCAATGGCTA 57.677 34.615 0.00 0.00 0.00 3.93
2367 2512 7.204243 TCTTATAGCATCATATCCAATGGCT 57.796 36.000 0.00 0.00 0.00 4.75
2368 2513 7.521748 GCATCTTATAGCATCATATCCAATGGC 60.522 40.741 0.00 0.00 0.00 4.40
2369 2514 7.307811 CGCATCTTATAGCATCATATCCAATGG 60.308 40.741 0.00 0.00 0.00 3.16
2370 2515 7.226128 ACGCATCTTATAGCATCATATCCAATG 59.774 37.037 0.00 0.00 0.00 2.82
2371 2516 7.226128 CACGCATCTTATAGCATCATATCCAAT 59.774 37.037 0.00 0.00 0.00 3.16
2372 2517 6.536224 CACGCATCTTATAGCATCATATCCAA 59.464 38.462 0.00 0.00 0.00 3.53
2373 2518 6.044682 CACGCATCTTATAGCATCATATCCA 58.955 40.000 0.00 0.00 0.00 3.41
2374 2519 6.019237 CACACGCATCTTATAGCATCATATCC 60.019 42.308 0.00 0.00 0.00 2.59
2375 2520 6.533012 ACACACGCATCTTATAGCATCATATC 59.467 38.462 0.00 0.00 0.00 1.63
2376 2521 6.312180 CACACACGCATCTTATAGCATCATAT 59.688 38.462 0.00 0.00 0.00 1.78
2377 2522 5.634859 CACACACGCATCTTATAGCATCATA 59.365 40.000 0.00 0.00 0.00 2.15
2378 2523 4.450080 CACACACGCATCTTATAGCATCAT 59.550 41.667 0.00 0.00 0.00 2.45
2379 2524 3.803778 CACACACGCATCTTATAGCATCA 59.196 43.478 0.00 0.00 0.00 3.07
2380 2525 3.363378 GCACACACGCATCTTATAGCATC 60.363 47.826 0.00 0.00 0.00 3.91
2381 2526 2.545526 GCACACACGCATCTTATAGCAT 59.454 45.455 0.00 0.00 0.00 3.79
2382 2527 1.933181 GCACACACGCATCTTATAGCA 59.067 47.619 0.00 0.00 0.00 3.49
2383 2528 2.033407 CAGCACACACGCATCTTATAGC 60.033 50.000 0.00 0.00 0.00 2.97
2384 2529 3.243877 GTCAGCACACACGCATCTTATAG 59.756 47.826 0.00 0.00 0.00 1.31
2385 2530 3.186909 GTCAGCACACACGCATCTTATA 58.813 45.455 0.00 0.00 0.00 0.98
2386 2531 2.002586 GTCAGCACACACGCATCTTAT 58.997 47.619 0.00 0.00 0.00 1.73
2387 2532 1.428448 GTCAGCACACACGCATCTTA 58.572 50.000 0.00 0.00 0.00 2.10
2388 2533 1.560004 CGTCAGCACACACGCATCTT 61.560 55.000 0.00 0.00 0.00 2.40
2389 2534 2.023771 CGTCAGCACACACGCATCT 61.024 57.895 0.00 0.00 0.00 2.90
2390 2535 2.310233 ACGTCAGCACACACGCATC 61.310 57.895 0.00 0.00 39.73 3.91
2391 2536 2.280119 ACGTCAGCACACACGCAT 60.280 55.556 0.00 0.00 39.73 4.73
2392 2537 3.261216 CACGTCAGCACACACGCA 61.261 61.111 0.00 0.00 39.73 5.24
2393 2538 4.000557 CCACGTCAGCACACACGC 62.001 66.667 0.00 0.00 39.73 5.34
2394 2539 3.337889 CCCACGTCAGCACACACG 61.338 66.667 0.00 0.00 41.90 4.49
2395 2540 1.817941 AACCCACGTCAGCACACAC 60.818 57.895 0.00 0.00 0.00 3.82
2396 2541 1.817520 CAACCCACGTCAGCACACA 60.818 57.895 0.00 0.00 0.00 3.72
2397 2542 0.531090 TACAACCCACGTCAGCACAC 60.531 55.000 0.00 0.00 0.00 3.82
2398 2543 0.394938 ATACAACCCACGTCAGCACA 59.605 50.000 0.00 0.00 0.00 4.57
2399 2544 1.076332 GATACAACCCACGTCAGCAC 58.924 55.000 0.00 0.00 0.00 4.40
2400 2545 0.973632 AGATACAACCCACGTCAGCA 59.026 50.000 0.00 0.00 0.00 4.41
2401 2546 1.337823 ACAGATACAACCCACGTCAGC 60.338 52.381 0.00 0.00 0.00 4.26
2402 2547 2.743636 ACAGATACAACCCACGTCAG 57.256 50.000 0.00 0.00 0.00 3.51
2403 2548 3.478857 AAACAGATACAACCCACGTCA 57.521 42.857 0.00 0.00 0.00 4.35
2404 2549 4.035909 ACAAAAACAGATACAACCCACGTC 59.964 41.667 0.00 0.00 0.00 4.34
2405 2550 3.949113 ACAAAAACAGATACAACCCACGT 59.051 39.130 0.00 0.00 0.00 4.49
2406 2551 4.561735 ACAAAAACAGATACAACCCACG 57.438 40.909 0.00 0.00 0.00 4.94
2407 2552 6.814146 TGAAAACAAAAACAGATACAACCCAC 59.186 34.615 0.00 0.00 0.00 4.61
2408 2553 6.936279 TGAAAACAAAAACAGATACAACCCA 58.064 32.000 0.00 0.00 0.00 4.51
2409 2554 7.835634 TTGAAAACAAAAACAGATACAACCC 57.164 32.000 0.00 0.00 0.00 4.11
2410 2555 8.931775 ACTTTGAAAACAAAAACAGATACAACC 58.068 29.630 0.00 0.00 0.00 3.77
2411 2556 9.739786 CACTTTGAAAACAAAAACAGATACAAC 57.260 29.630 0.00 0.00 0.00 3.32
2412 2557 9.698309 TCACTTTGAAAACAAAAACAGATACAA 57.302 25.926 0.00 0.00 0.00 2.41
2413 2558 9.698309 TTCACTTTGAAAACAAAAACAGATACA 57.302 25.926 0.00 0.00 32.71 2.29
2416 2561 9.434420 TCATTCACTTTGAAAACAAAAACAGAT 57.566 25.926 0.00 0.00 40.12 2.90
2417 2562 8.824159 TCATTCACTTTGAAAACAAAAACAGA 57.176 26.923 0.00 0.00 40.12 3.41
2418 2563 9.875675 TTTCATTCACTTTGAAAACAAAAACAG 57.124 25.926 0.00 0.00 40.12 3.16
2419 2564 9.657121 GTTTCATTCACTTTGAAAACAAAAACA 57.343 25.926 0.81 0.00 42.82 2.83
2420 2565 9.112789 GGTTTCATTCACTTTGAAAACAAAAAC 57.887 29.630 8.82 0.00 45.71 2.43
2457 2602 7.506261 GGGAGTACCTAGAACTCATTTAGATGA 59.494 40.741 20.28 0.00 44.25 2.92
2458 2603 7.662897 GGGAGTACCTAGAACTCATTTAGATG 58.337 42.308 20.28 0.00 44.25 2.90
2459 2604 7.842887 GGGAGTACCTAGAACTCATTTAGAT 57.157 40.000 20.28 0.00 44.25 1.98
2537 4291 0.603569 CAGTGTCGAAGGTGGCTAGT 59.396 55.000 0.00 0.00 0.00 2.57
2572 4326 9.494479 CACATGTACAAAGCACTCTTATATTTG 57.506 33.333 0.00 0.00 37.00 2.32
2573 4327 9.448438 TCACATGTACAAAGCACTCTTATATTT 57.552 29.630 0.00 0.00 31.02 1.40
2581 4335 4.310769 ACTCTCACATGTACAAAGCACTC 58.689 43.478 0.00 0.00 0.00 3.51
2670 4431 2.610859 GGAACAGGGGCCTCAGGA 60.611 66.667 4.79 0.00 0.00 3.86
2691 4452 6.024552 TGCTGAAATTGACATTTCCTAACC 57.975 37.500 5.45 0.00 45.53 2.85
2693 4454 6.436847 TCCATGCTGAAATTGACATTTCCTAA 59.563 34.615 5.45 0.00 45.53 2.69
2727 4492 3.307691 GGCATCCGATCTTATCATTCCCA 60.308 47.826 0.00 0.00 0.00 4.37
2742 4511 3.280938 TTTGGGTCTGGGGCATCCG 62.281 63.158 0.00 0.00 38.76 4.18
2774 4543 7.339212 TCCTGACGGAATTGACATTTTCATAAT 59.661 33.333 0.00 0.00 36.03 1.28
2800 4570 4.690748 CGTATGACACTGGTGACATCTTTT 59.309 41.667 18.29 2.78 42.93 2.27
2804 4574 2.540515 CCGTATGACACTGGTGACATC 58.459 52.381 18.29 11.30 42.93 3.06
2812 4582 1.518572 GGCGTCCCGTATGACACTG 60.519 63.158 0.00 0.00 34.88 3.66
2814 4584 2.202837 GGGCGTCCCGTATGACAC 60.203 66.667 0.00 0.00 34.88 3.67
2827 4598 0.180406 AGTTAGTTAGGCATGGGGCG 59.820 55.000 0.00 0.00 46.16 6.13
2838 4609 1.682854 CCGGATGCGGGTAGTTAGTTA 59.317 52.381 19.27 0.00 0.00 2.24
2839 4610 0.462789 CCGGATGCGGGTAGTTAGTT 59.537 55.000 19.27 0.00 0.00 2.24
2840 4611 1.397390 CCCGGATGCGGGTAGTTAGT 61.397 60.000 34.54 0.00 43.90 2.24
2841 4612 1.366366 CCCGGATGCGGGTAGTTAG 59.634 63.158 34.54 9.02 43.90 2.34
2842 4613 3.541072 CCCGGATGCGGGTAGTTA 58.459 61.111 34.54 0.00 43.90 2.24
2862 4633 4.112634 GGAACTTGAGCACAAAAAGAACC 58.887 43.478 0.00 0.00 35.49 3.62
2864 4635 5.398603 TTGGAACTTGAGCACAAAAAGAA 57.601 34.783 0.00 0.00 35.49 2.52
2865 4636 4.142182 CCTTGGAACTTGAGCACAAAAAGA 60.142 41.667 0.00 0.00 35.49 2.52
2871 4642 1.490490 AGTCCTTGGAACTTGAGCACA 59.510 47.619 0.00 0.00 0.00 4.57
2872 4643 2.262423 AGTCCTTGGAACTTGAGCAC 57.738 50.000 0.00 0.00 0.00 4.40
2873 4644 3.391296 ACTTAGTCCTTGGAACTTGAGCA 59.609 43.478 0.00 0.00 0.00 4.26
2874 4645 4.009370 ACTTAGTCCTTGGAACTTGAGC 57.991 45.455 0.00 0.00 0.00 4.26
2875 4646 5.011738 TGGTACTTAGTCCTTGGAACTTGAG 59.988 44.000 0.00 0.00 0.00 3.02
2876 4647 4.903049 TGGTACTTAGTCCTTGGAACTTGA 59.097 41.667 0.00 0.00 0.00 3.02
2877 4648 5.223449 TGGTACTTAGTCCTTGGAACTTG 57.777 43.478 0.00 0.00 0.00 3.16
2878 4649 5.337330 CGATGGTACTTAGTCCTTGGAACTT 60.337 44.000 0.00 0.00 0.00 2.66
2879 4650 4.159879 CGATGGTACTTAGTCCTTGGAACT 59.840 45.833 0.00 0.00 0.00 3.01
2880 4651 4.159135 TCGATGGTACTTAGTCCTTGGAAC 59.841 45.833 0.00 0.00 0.00 3.62
2881 4652 4.159135 GTCGATGGTACTTAGTCCTTGGAA 59.841 45.833 0.00 0.00 0.00 3.53
2882 4653 3.698040 GTCGATGGTACTTAGTCCTTGGA 59.302 47.826 0.00 0.00 0.00 3.53
2883 4654 3.446161 TGTCGATGGTACTTAGTCCTTGG 59.554 47.826 0.00 0.00 0.00 3.61
2884 4655 4.713824 TGTCGATGGTACTTAGTCCTTG 57.286 45.455 0.00 0.00 0.00 3.61
2885 4656 4.159879 CCTTGTCGATGGTACTTAGTCCTT 59.840 45.833 0.00 0.00 0.00 3.36
2886 4657 3.700038 CCTTGTCGATGGTACTTAGTCCT 59.300 47.826 0.00 0.00 0.00 3.85
2887 4658 3.446516 ACCTTGTCGATGGTACTTAGTCC 59.553 47.826 6.02 0.00 34.36 3.85
2888 4659 4.157289 TCACCTTGTCGATGGTACTTAGTC 59.843 45.833 7.27 0.00 34.79 2.59
2889 4660 4.084287 TCACCTTGTCGATGGTACTTAGT 58.916 43.478 7.27 0.00 34.79 2.24
2890 4661 4.713824 TCACCTTGTCGATGGTACTTAG 57.286 45.455 7.27 0.00 34.79 2.18
2891 4662 4.954202 AGATCACCTTGTCGATGGTACTTA 59.046 41.667 7.27 0.00 34.79 2.24
2892 4663 3.769844 AGATCACCTTGTCGATGGTACTT 59.230 43.478 7.27 0.00 34.79 2.24
2893 4664 3.366396 AGATCACCTTGTCGATGGTACT 58.634 45.455 7.27 5.60 34.79 2.73
2894 4665 3.491104 GGAGATCACCTTGTCGATGGTAC 60.491 52.174 1.33 0.00 34.79 3.34
2895 4666 2.693591 GGAGATCACCTTGTCGATGGTA 59.306 50.000 1.33 0.00 34.79 3.25
2896 4667 1.482593 GGAGATCACCTTGTCGATGGT 59.517 52.381 1.33 0.00 36.96 3.55
2897 4668 1.759445 AGGAGATCACCTTGTCGATGG 59.241 52.381 5.78 0.00 36.86 3.51
2898 4669 4.655762 TTAGGAGATCACCTTGTCGATG 57.344 45.455 17.39 0.00 41.00 3.84
2899 4670 5.878406 ATTTAGGAGATCACCTTGTCGAT 57.122 39.130 17.39 2.52 41.00 3.59
2900 4671 5.046591 ACAATTTAGGAGATCACCTTGTCGA 60.047 40.000 17.39 0.00 41.00 4.20
2901 4672 5.063944 CACAATTTAGGAGATCACCTTGTCG 59.936 44.000 17.39 6.84 41.00 4.35
2902 4673 6.092807 GTCACAATTTAGGAGATCACCTTGTC 59.907 42.308 17.39 2.85 41.00 3.18
2903 4674 5.940470 GTCACAATTTAGGAGATCACCTTGT 59.060 40.000 17.39 12.12 41.00 3.16
2904 4675 6.176183 AGTCACAATTTAGGAGATCACCTTG 58.824 40.000 17.39 11.48 41.00 3.61
2905 4676 6.380079 AGTCACAATTTAGGAGATCACCTT 57.620 37.500 17.39 0.00 41.00 3.50
2906 4677 6.013379 TCAAGTCACAATTTAGGAGATCACCT 60.013 38.462 16.41 16.41 43.32 4.00
2907 4678 6.173339 TCAAGTCACAATTTAGGAGATCACC 58.827 40.000 0.05 0.05 0.00 4.02
2908 4679 7.672983 TTCAAGTCACAATTTAGGAGATCAC 57.327 36.000 0.00 0.00 0.00 3.06
2909 4680 8.690203 TTTTCAAGTCACAATTTAGGAGATCA 57.310 30.769 0.00 0.00 0.00 2.92
2910 4681 8.239998 CCTTTTCAAGTCACAATTTAGGAGATC 58.760 37.037 0.00 0.00 0.00 2.75
2911 4682 7.177392 CCCTTTTCAAGTCACAATTTAGGAGAT 59.823 37.037 0.00 0.00 0.00 2.75
2912 4683 6.490040 CCCTTTTCAAGTCACAATTTAGGAGA 59.510 38.462 0.00 0.00 0.00 3.71
2913 4684 6.294731 CCCCTTTTCAAGTCACAATTTAGGAG 60.295 42.308 0.00 0.00 0.00 3.69
2914 4685 5.538433 CCCCTTTTCAAGTCACAATTTAGGA 59.462 40.000 0.00 0.00 0.00 2.94
2915 4686 5.538433 TCCCCTTTTCAAGTCACAATTTAGG 59.462 40.000 0.00 0.00 0.00 2.69
2916 4687 6.648879 TCCCCTTTTCAAGTCACAATTTAG 57.351 37.500 0.00 0.00 0.00 1.85
2917 4688 6.462347 GCTTCCCCTTTTCAAGTCACAATTTA 60.462 38.462 0.00 0.00 0.00 1.40
2918 4689 5.684813 GCTTCCCCTTTTCAAGTCACAATTT 60.685 40.000 0.00 0.00 0.00 1.82
2919 4690 4.202253 GCTTCCCCTTTTCAAGTCACAATT 60.202 41.667 0.00 0.00 0.00 2.32
2920 4691 3.321968 GCTTCCCCTTTTCAAGTCACAAT 59.678 43.478 0.00 0.00 0.00 2.71
2921 4692 2.693074 GCTTCCCCTTTTCAAGTCACAA 59.307 45.455 0.00 0.00 0.00 3.33
2922 4693 2.091885 AGCTTCCCCTTTTCAAGTCACA 60.092 45.455 0.00 0.00 0.00 3.58
2923 4694 2.554462 GAGCTTCCCCTTTTCAAGTCAC 59.446 50.000 0.00 0.00 0.00 3.67
2924 4695 2.443255 AGAGCTTCCCCTTTTCAAGTCA 59.557 45.455 0.00 0.00 0.00 3.41
2925 4696 3.147553 AGAGCTTCCCCTTTTCAAGTC 57.852 47.619 0.00 0.00 0.00 3.01
2926 4697 3.602205 AAGAGCTTCCCCTTTTCAAGT 57.398 42.857 0.00 0.00 0.00 3.16
2927 4698 4.216472 GTGTAAGAGCTTCCCCTTTTCAAG 59.784 45.833 0.00 0.00 0.00 3.02
2928 4699 4.142038 GTGTAAGAGCTTCCCCTTTTCAA 58.858 43.478 0.00 0.00 0.00 2.69
2929 4700 3.137544 TGTGTAAGAGCTTCCCCTTTTCA 59.862 43.478 0.00 0.00 0.00 2.69
2930 4701 3.751518 TGTGTAAGAGCTTCCCCTTTTC 58.248 45.455 0.00 0.00 0.00 2.29
2931 4702 3.876309 TGTGTAAGAGCTTCCCCTTTT 57.124 42.857 0.00 0.00 0.00 2.27
2932 4703 3.562176 CCATGTGTAAGAGCTTCCCCTTT 60.562 47.826 0.00 0.00 0.00 3.11
2933 4704 2.025887 CCATGTGTAAGAGCTTCCCCTT 60.026 50.000 0.00 0.00 0.00 3.95
2934 4705 1.561542 CCATGTGTAAGAGCTTCCCCT 59.438 52.381 0.00 0.00 0.00 4.79
2935 4706 2.019156 GCCATGTGTAAGAGCTTCCCC 61.019 57.143 0.00 0.00 0.00 4.81
2936 4707 1.340017 TGCCATGTGTAAGAGCTTCCC 60.340 52.381 0.00 0.00 0.00 3.97
2937 4708 2.113860 TGCCATGTGTAAGAGCTTCC 57.886 50.000 0.00 0.00 0.00 3.46
2938 4709 3.671702 GCTTTGCCATGTGTAAGAGCTTC 60.672 47.826 0.00 0.00 0.00 3.86
2939 4710 2.229784 GCTTTGCCATGTGTAAGAGCTT 59.770 45.455 0.00 0.00 0.00 3.74
2940 4711 1.815003 GCTTTGCCATGTGTAAGAGCT 59.185 47.619 0.00 0.00 0.00 4.09
2941 4712 1.541147 TGCTTTGCCATGTGTAAGAGC 59.459 47.619 0.00 3.09 0.00 4.09
2942 4713 2.553602 TGTGCTTTGCCATGTGTAAGAG 59.446 45.455 0.00 0.00 0.00 2.85
2943 4714 2.580962 TGTGCTTTGCCATGTGTAAGA 58.419 42.857 0.00 0.00 0.00 2.10
2944 4715 3.247442 CATGTGCTTTGCCATGTGTAAG 58.753 45.455 10.60 0.00 34.75 2.34
2945 4716 2.029200 CCATGTGCTTTGCCATGTGTAA 60.029 45.455 14.78 0.00 36.34 2.41
2946 4717 1.545136 CCATGTGCTTTGCCATGTGTA 59.455 47.619 14.78 0.00 36.34 2.90
2947 4718 0.319083 CCATGTGCTTTGCCATGTGT 59.681 50.000 14.78 0.00 36.34 3.72
2948 4719 0.319083 ACCATGTGCTTTGCCATGTG 59.681 50.000 14.78 10.83 36.34 3.21
2949 4720 1.001181 GAACCATGTGCTTTGCCATGT 59.999 47.619 14.78 3.67 36.34 3.21
2950 4721 1.274167 AGAACCATGTGCTTTGCCATG 59.726 47.619 11.37 11.37 37.15 3.66
2951 4722 1.547372 GAGAACCATGTGCTTTGCCAT 59.453 47.619 0.00 0.00 0.00 4.40
2952 4723 0.961019 GAGAACCATGTGCTTTGCCA 59.039 50.000 0.00 0.00 0.00 4.92
2953 4724 0.244721 GGAGAACCATGTGCTTTGCC 59.755 55.000 0.00 0.00 35.97 4.52
2954 4725 1.251251 AGGAGAACCATGTGCTTTGC 58.749 50.000 0.00 0.00 38.94 3.68
2955 4726 4.074970 ACTAAGGAGAACCATGTGCTTTG 58.925 43.478 0.00 0.00 38.94 2.77
2956 4727 4.202461 TGACTAAGGAGAACCATGTGCTTT 60.202 41.667 0.00 0.00 38.94 3.51
2957 4728 3.327757 TGACTAAGGAGAACCATGTGCTT 59.672 43.478 0.00 0.00 38.94 3.91
2958 4729 2.906389 TGACTAAGGAGAACCATGTGCT 59.094 45.455 0.00 0.00 38.94 4.40
2959 4730 3.334583 TGACTAAGGAGAACCATGTGC 57.665 47.619 0.00 0.00 38.94 4.57
2960 4731 8.511604 AATAATTGACTAAGGAGAACCATGTG 57.488 34.615 0.00 0.00 38.94 3.21
2961 4732 9.178758 GAAATAATTGACTAAGGAGAACCATGT 57.821 33.333 0.00 0.00 38.94 3.21
2962 4733 8.624776 GGAAATAATTGACTAAGGAGAACCATG 58.375 37.037 0.00 0.00 38.94 3.66
2963 4734 8.336235 TGGAAATAATTGACTAAGGAGAACCAT 58.664 33.333 0.00 0.00 38.94 3.55
2964 4735 7.610305 GTGGAAATAATTGACTAAGGAGAACCA 59.390 37.037 0.00 0.00 38.94 3.67
2965 4736 7.829706 AGTGGAAATAATTGACTAAGGAGAACC 59.170 37.037 0.00 0.00 0.00 3.62
2966 4737 8.669243 CAGTGGAAATAATTGACTAAGGAGAAC 58.331 37.037 0.00 0.00 0.00 3.01
2967 4738 7.336931 GCAGTGGAAATAATTGACTAAGGAGAA 59.663 37.037 0.00 0.00 0.00 2.87
2968 4739 6.823689 GCAGTGGAAATAATTGACTAAGGAGA 59.176 38.462 0.00 0.00 0.00 3.71
2969 4740 6.825721 AGCAGTGGAAATAATTGACTAAGGAG 59.174 38.462 0.00 0.00 0.00 3.69
2970 4741 6.599244 CAGCAGTGGAAATAATTGACTAAGGA 59.401 38.462 0.00 0.00 0.00 3.36
2971 4742 6.678900 GCAGCAGTGGAAATAATTGACTAAGG 60.679 42.308 0.00 0.00 0.00 2.69
2972 4743 6.127925 TGCAGCAGTGGAAATAATTGACTAAG 60.128 38.462 0.00 0.00 0.00 2.18
2973 4744 5.709631 TGCAGCAGTGGAAATAATTGACTAA 59.290 36.000 0.00 0.00 0.00 2.24
2974 4745 5.252547 TGCAGCAGTGGAAATAATTGACTA 58.747 37.500 0.00 0.00 0.00 2.59
2975 4746 4.081406 TGCAGCAGTGGAAATAATTGACT 58.919 39.130 0.00 0.00 0.00 3.41
2976 4747 4.156556 TCTGCAGCAGTGGAAATAATTGAC 59.843 41.667 22.10 0.00 32.61 3.18
2977 4748 4.334552 TCTGCAGCAGTGGAAATAATTGA 58.665 39.130 22.10 0.00 32.61 2.57
2978 4749 4.707030 TCTGCAGCAGTGGAAATAATTG 57.293 40.909 22.10 0.00 32.61 2.32
2979 4750 5.726980 TTTCTGCAGCAGTGGAAATAATT 57.273 34.783 22.10 0.00 32.61 1.40
2980 4751 5.337009 CCTTTTCTGCAGCAGTGGAAATAAT 60.337 40.000 22.10 0.00 32.61 1.28
2981 4752 4.022068 CCTTTTCTGCAGCAGTGGAAATAA 60.022 41.667 22.10 4.33 32.61 1.40
2982 4753 3.507233 CCTTTTCTGCAGCAGTGGAAATA 59.493 43.478 22.10 3.72 32.61 1.40
2983 4754 2.298163 CCTTTTCTGCAGCAGTGGAAAT 59.702 45.455 22.10 0.00 32.61 2.17
2984 4755 1.682854 CCTTTTCTGCAGCAGTGGAAA 59.317 47.619 22.10 18.05 32.61 3.13
2985 4756 1.133823 TCCTTTTCTGCAGCAGTGGAA 60.134 47.619 22.10 12.42 32.61 3.53
2986 4757 0.473755 TCCTTTTCTGCAGCAGTGGA 59.526 50.000 22.10 19.79 32.61 4.02
2987 4758 0.595095 GTCCTTTTCTGCAGCAGTGG 59.405 55.000 22.10 18.07 32.61 4.00
2988 4759 1.311859 TGTCCTTTTCTGCAGCAGTG 58.688 50.000 22.10 10.61 32.61 3.66
2989 4760 2.057137 TTGTCCTTTTCTGCAGCAGT 57.943 45.000 22.10 0.00 32.61 4.40
2990 4761 3.655276 AATTGTCCTTTTCTGCAGCAG 57.345 42.857 17.10 17.10 0.00 4.24
2991 4762 5.528043 TTAAATTGTCCTTTTCTGCAGCA 57.472 34.783 9.47 0.00 0.00 4.41
2992 4763 6.843069 TTTTAAATTGTCCTTTTCTGCAGC 57.157 33.333 9.47 0.00 0.00 5.25
2993 4764 7.799914 GCATTTTTAAATTGTCCTTTTCTGCAG 59.200 33.333 7.63 7.63 0.00 4.41
2994 4765 7.281774 TGCATTTTTAAATTGTCCTTTTCTGCA 59.718 29.630 0.00 0.00 0.00 4.41
2995 4766 7.638134 TGCATTTTTAAATTGTCCTTTTCTGC 58.362 30.769 0.00 0.00 0.00 4.26
2996 4767 8.829612 ACTGCATTTTTAAATTGTCCTTTTCTG 58.170 29.630 0.00 0.00 0.00 3.02
2997 4768 8.962884 ACTGCATTTTTAAATTGTCCTTTTCT 57.037 26.923 0.00 0.00 0.00 2.52
2998 4769 8.825745 TGACTGCATTTTTAAATTGTCCTTTTC 58.174 29.630 0.00 0.00 0.00 2.29
2999 4770 8.729805 TGACTGCATTTTTAAATTGTCCTTTT 57.270 26.923 0.00 0.00 0.00 2.27
3000 4771 8.611757 GTTGACTGCATTTTTAAATTGTCCTTT 58.388 29.630 0.00 0.00 0.00 3.11
3001 4772 7.768120 TGTTGACTGCATTTTTAAATTGTCCTT 59.232 29.630 0.00 0.00 0.00 3.36
3002 4773 7.271511 TGTTGACTGCATTTTTAAATTGTCCT 58.728 30.769 0.00 0.00 0.00 3.85
3003 4774 7.475771 TGTTGACTGCATTTTTAAATTGTCC 57.524 32.000 0.00 0.00 0.00 4.02
3004 4775 7.850492 GGTTGTTGACTGCATTTTTAAATTGTC 59.150 33.333 0.00 0.00 0.00 3.18
3005 4776 7.552330 AGGTTGTTGACTGCATTTTTAAATTGT 59.448 29.630 0.00 0.00 0.00 2.71
3006 4777 7.918643 AGGTTGTTGACTGCATTTTTAAATTG 58.081 30.769 0.00 0.00 0.00 2.32
3007 4778 8.397148 CAAGGTTGTTGACTGCATTTTTAAATT 58.603 29.630 0.00 0.00 0.00 1.82
3008 4779 7.552330 ACAAGGTTGTTGACTGCATTTTTAAAT 59.448 29.630 0.00 0.00 38.47 1.40
3009 4780 6.876257 ACAAGGTTGTTGACTGCATTTTTAAA 59.124 30.769 0.00 0.00 38.47 1.52
3010 4781 6.402222 ACAAGGTTGTTGACTGCATTTTTAA 58.598 32.000 0.00 0.00 38.47 1.52
3011 4782 5.971763 ACAAGGTTGTTGACTGCATTTTTA 58.028 33.333 0.00 0.00 38.47 1.52
3012 4783 4.831107 ACAAGGTTGTTGACTGCATTTTT 58.169 34.783 0.00 0.00 38.47 1.94
3013 4784 4.470334 ACAAGGTTGTTGACTGCATTTT 57.530 36.364 0.00 0.00 38.47 1.82
3025 4796 4.383173 CGTAAGTTCCCTAACAAGGTTGT 58.617 43.478 0.00 0.00 44.72 3.32
3050 4821 9.663904 CGACCAGGAACATATTTACAAATATTG 57.336 33.333 0.00 1.94 39.03 1.90
3051 4822 9.403583 ACGACCAGGAACATATTTACAAATATT 57.596 29.630 0.00 0.00 39.03 1.28
3052 4823 8.974060 ACGACCAGGAACATATTTACAAATAT 57.026 30.769 0.00 2.07 41.09 1.28
3053 4824 7.496591 GGACGACCAGGAACATATTTACAAATA 59.503 37.037 0.00 0.00 34.45 1.40
3054 4825 6.317893 GGACGACCAGGAACATATTTACAAAT 59.682 38.462 0.00 0.00 35.97 2.32
3055 4826 5.644636 GGACGACCAGGAACATATTTACAAA 59.355 40.000 0.00 0.00 35.97 2.83
3056 4827 5.180271 GGACGACCAGGAACATATTTACAA 58.820 41.667 0.00 0.00 35.97 2.41
3057 4828 4.223255 TGGACGACCAGGAACATATTTACA 59.777 41.667 1.37 0.00 41.77 2.41
3058 4829 4.761975 TGGACGACCAGGAACATATTTAC 58.238 43.478 1.37 0.00 41.77 2.01
3060 4831 3.992943 TGGACGACCAGGAACATATTT 57.007 42.857 1.37 0.00 41.77 1.40
3071 4842 0.608130 CTGGATCTTGTGGACGACCA 59.392 55.000 1.37 1.37 44.76 4.02
3072 4843 0.741221 GCTGGATCTTGTGGACGACC 60.741 60.000 0.00 0.00 0.00 4.79
3073 4844 0.037326 TGCTGGATCTTGTGGACGAC 60.037 55.000 0.00 0.00 0.00 4.34
3074 4845 0.037326 GTGCTGGATCTTGTGGACGA 60.037 55.000 0.00 0.00 0.00 4.20
3075 4846 0.320683 TGTGCTGGATCTTGTGGACG 60.321 55.000 0.00 0.00 0.00 4.79
3076 4847 1.160137 GTGTGCTGGATCTTGTGGAC 58.840 55.000 0.00 0.00 0.00 4.02
3077 4848 1.059098 AGTGTGCTGGATCTTGTGGA 58.941 50.000 0.00 0.00 0.00 4.02
3078 4849 1.162698 CAGTGTGCTGGATCTTGTGG 58.837 55.000 0.00 0.00 39.01 4.17
3079 4850 1.534163 CACAGTGTGCTGGATCTTGTG 59.466 52.381 10.97 0.00 46.62 3.33
3080 4851 1.141657 ACACAGTGTGCTGGATCTTGT 59.858 47.619 23.21 0.00 46.62 3.16
3081 4852 1.534163 CACACAGTGTGCTGGATCTTG 59.466 52.381 23.21 7.47 46.62 3.02
3082 4853 1.544093 CCACACAGTGTGCTGGATCTT 60.544 52.381 27.37 6.09 46.51 2.40
3083 4854 0.035881 CCACACAGTGTGCTGGATCT 59.964 55.000 27.37 6.73 46.51 2.75
3084 4855 0.250467 ACCACACAGTGTGCTGGATC 60.250 55.000 33.13 0.00 46.51 3.36
3085 4856 0.183492 AACCACACAGTGTGCTGGAT 59.817 50.000 33.13 25.21 46.51 3.41
3086 4857 0.747644 CAACCACACAGTGTGCTGGA 60.748 55.000 33.13 0.00 46.51 3.86
3087 4858 1.729276 CAACCACACAGTGTGCTGG 59.271 57.895 28.55 28.55 46.51 4.85
3088 4859 1.064621 GCAACCACACAGTGTGCTG 59.935 57.895 26.03 23.41 46.51 4.41
3089 4860 2.120909 GGCAACCACACAGTGTGCT 61.121 57.895 26.03 11.87 46.51 4.40
3090 4861 2.412937 GGCAACCACACAGTGTGC 59.587 61.111 26.03 15.59 46.51 4.57
3092 4863 2.515991 CCGGCAACCACACAGTGT 60.516 61.111 0.00 0.00 0.00 3.55
3093 4864 1.380403 TTTCCGGCAACCACACAGTG 61.380 55.000 0.00 0.00 0.00 3.66
3094 4865 1.077357 TTTCCGGCAACCACACAGT 60.077 52.632 0.00 0.00 0.00 3.55
3095 4866 1.654220 CTTTCCGGCAACCACACAG 59.346 57.895 0.00 0.00 0.00 3.66
3096 4867 2.485795 GCTTTCCGGCAACCACACA 61.486 57.895 0.00 0.00 0.00 3.72
3097 4868 1.805428 ATGCTTTCCGGCAACCACAC 61.805 55.000 0.00 0.00 45.68 3.82
3098 4869 1.112315 AATGCTTTCCGGCAACCACA 61.112 50.000 0.00 0.00 45.68 4.17
3099 4870 0.667184 CAATGCTTTCCGGCAACCAC 60.667 55.000 0.00 0.00 45.68 4.16
3100 4871 1.112315 ACAATGCTTTCCGGCAACCA 61.112 50.000 0.00 0.00 45.68 3.67
3101 4872 0.388520 GACAATGCTTTCCGGCAACC 60.389 55.000 0.00 0.00 45.68 3.77
3102 4873 0.729140 CGACAATGCTTTCCGGCAAC 60.729 55.000 0.00 0.00 45.68 4.17
3103 4874 1.578926 CGACAATGCTTTCCGGCAA 59.421 52.632 0.00 0.00 45.68 4.52
3104 4875 2.331893 CCGACAATGCTTTCCGGCA 61.332 57.895 0.00 0.00 46.63 5.69
3105 4876 1.982073 CTCCGACAATGCTTTCCGGC 61.982 60.000 14.27 0.00 39.96 6.13
3106 4877 0.673644 ACTCCGACAATGCTTTCCGG 60.674 55.000 13.37 13.37 41.36 5.14
3107 4878 1.135972 CAACTCCGACAATGCTTTCCG 60.136 52.381 0.00 0.00 0.00 4.30
3108 4879 1.401539 GCAACTCCGACAATGCTTTCC 60.402 52.381 0.00 0.00 35.93 3.13
3109 4880 1.725931 CGCAACTCCGACAATGCTTTC 60.726 52.381 0.00 0.00 36.67 2.62
3110 4881 0.238289 CGCAACTCCGACAATGCTTT 59.762 50.000 0.00 0.00 36.67 3.51
3111 4882 0.602638 TCGCAACTCCGACAATGCTT 60.603 50.000 0.00 0.00 36.67 3.91
3112 4883 1.005037 TCGCAACTCCGACAATGCT 60.005 52.632 0.00 0.00 36.67 3.79
3113 4884 3.561429 TCGCAACTCCGACAATGC 58.439 55.556 0.00 0.00 35.49 3.56
3119 4890 1.371267 CTTGACGTCGCAACTCCGA 60.371 57.895 11.62 0.00 34.40 4.55
3120 4891 3.000080 GCTTGACGTCGCAACTCCG 62.000 63.158 11.62 0.00 0.00 4.63
3121 4892 1.618640 GAGCTTGACGTCGCAACTCC 61.619 60.000 16.22 0.00 0.00 3.85
3122 4893 1.775962 GAGCTTGACGTCGCAACTC 59.224 57.895 16.22 13.26 0.00 3.01
3123 4894 2.016704 CGAGCTTGACGTCGCAACT 61.017 57.895 16.22 8.73 0.00 3.16
3124 4895 2.014554 TCGAGCTTGACGTCGCAAC 61.015 57.895 16.22 9.44 36.11 4.17
3125 4896 2.014554 GTCGAGCTTGACGTCGCAA 61.015 57.895 18.28 4.07 36.11 4.85
3126 4897 2.428569 GTCGAGCTTGACGTCGCA 60.429 61.111 18.28 2.89 36.11 5.10


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.