Multiple sequence alignment - TraesCS4B01G002200

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G002200 chr4B 100.000 2141 0 0 1 2141 1200461 1198321 0.000000e+00 3954
1 TraesCS4B01G002200 chr4B 100.000 399 0 0 2487 2885 1197975 1197577 0.000000e+00 737
2 TraesCS4B01G002200 chr4B 86.408 309 32 8 2556 2862 658530586 658530286 2.140000e-86 329
3 TraesCS4B01G002200 chr4D 85.285 1563 86 46 620 2107 662989 664482 0.000000e+00 1480
4 TraesCS4B01G002200 chr4D 89.501 381 35 3 1 381 662373 662748 7.230000e-131 477
5 TraesCS4B01G002200 chr4A 87.799 1336 67 30 786 2066 907290 908584 0.000000e+00 1476
6 TraesCS4B01G002200 chr4A 86.452 310 36 4 2557 2862 688884925 688885232 4.610000e-88 335
7 TraesCS4B01G002200 chr4A 84.211 152 19 4 1968 2114 165057533 165057382 3.000000e-30 143
8 TraesCS4B01G002200 chr3B 90.187 642 34 8 835 1455 825527467 825526834 0.000000e+00 809
9 TraesCS4B01G002200 chr3B 89.465 617 28 11 835 1432 823869194 823868596 0.000000e+00 745
10 TraesCS4B01G002200 chr3B 90.879 307 25 3 2557 2862 604772291 604772595 2.680000e-110 409
11 TraesCS4B01G002200 chr3B 83.444 151 20 4 1969 2114 491440237 491440087 5.010000e-28 135
12 TraesCS4B01G002200 chrUn 90.741 594 29 8 878 1455 235916829 235917412 0.000000e+00 769
13 TraesCS4B01G002200 chrUn 83.206 131 17 3 1966 2093 24362563 24362691 6.530000e-22 115
14 TraesCS4B01G002200 chr2B 90.032 311 26 5 2555 2862 30638362 30638670 5.790000e-107 398
15 TraesCS4B01G002200 chr6D 88.851 296 27 4 2591 2884 434469978 434469687 2.730000e-95 359
16 TraesCS4B01G002200 chr1B 87.055 309 30 9 2557 2862 375404078 375403777 9.900000e-90 340
17 TraesCS4B01G002200 chr1B 87.055 309 30 9 2557 2862 566039865 566039564 9.900000e-90 340
18 TraesCS4B01G002200 chr1B 86.218 312 31 10 2555 2862 375419315 375419012 7.710000e-86 327
19 TraesCS4B01G002200 chr5B 85.498 331 36 10 2551 2878 507627757 507628078 4.610000e-88 335
20 TraesCS4B01G002200 chr6B 85.430 151 16 5 1970 2114 8134732 8134882 4.980000e-33 152
21 TraesCS4B01G002200 chr3A 84.177 158 18 5 1963 2114 117483934 117484090 2.320000e-31 147
22 TraesCS4B01G002200 chr2A 84.000 150 19 4 1969 2115 535214211 535214064 3.880000e-29 139
23 TraesCS4B01G002200 chr2D 87.395 119 12 2 1966 2081 28789784 28789666 1.800000e-27 134
24 TraesCS4B01G002200 chr5A 82.119 151 22 4 1969 2114 640401182 640401032 1.090000e-24 124


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G002200 chr4B 1197577 1200461 2884 True 2345.5 3954 100.000 1 2885 2 chr4B.!!$R2 2884
1 TraesCS4B01G002200 chr4D 662373 664482 2109 False 978.5 1480 87.393 1 2107 2 chr4D.!!$F1 2106
2 TraesCS4B01G002200 chr4A 907290 908584 1294 False 1476.0 1476 87.799 786 2066 1 chr4A.!!$F1 1280
3 TraesCS4B01G002200 chr3B 825526834 825527467 633 True 809.0 809 90.187 835 1455 1 chr3B.!!$R3 620
4 TraesCS4B01G002200 chr3B 823868596 823869194 598 True 745.0 745 89.465 835 1432 1 chr3B.!!$R2 597
5 TraesCS4B01G002200 chrUn 235916829 235917412 583 False 769.0 769 90.741 878 1455 1 chrUn.!!$F2 577

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
750 802 0.179062 ATCTGTGGAGCAATCCGAGC 60.179 55.0 0.0 0.0 0.0 5.03 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2657 2813 0.032813 ATGGCCTCTTCCATTGGTGG 60.033 55.0 3.32 2.96 44.04 4.61 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
42 43 2.583441 CCACTTGAGGCCTCGTCCA 61.583 63.158 27.43 8.13 0.00 4.02
52 53 2.202570 CTCGTCCAGCGTAACCCG 60.203 66.667 0.00 0.00 42.13 5.28
55 56 2.090524 CGTCCAGCGTAACCCGAAC 61.091 63.158 0.00 0.00 39.56 3.95
56 57 1.739196 GTCCAGCGTAACCCGAACC 60.739 63.158 0.00 0.00 39.56 3.62
57 58 2.812178 CCAGCGTAACCCGAACCG 60.812 66.667 0.00 0.00 39.56 4.44
58 59 2.259204 CAGCGTAACCCGAACCGA 59.741 61.111 0.00 0.00 39.56 4.69
65 66 0.532115 TAACCCGAACCGAACTAGCC 59.468 55.000 0.00 0.00 0.00 3.93
69 70 0.458025 CCGAACCGAACTAGCCAGAC 60.458 60.000 0.00 0.00 0.00 3.51
86 87 3.274288 CAGACCACTTGAGCTAAATCCC 58.726 50.000 0.00 0.00 0.00 3.85
88 89 3.589288 AGACCACTTGAGCTAAATCCCTT 59.411 43.478 0.00 0.00 0.00 3.95
91 92 3.600388 CACTTGAGCTAAATCCCTTCGT 58.400 45.455 0.00 0.00 0.00 3.85
99 100 1.497161 AAATCCCTTCGTCGGATCCT 58.503 50.000 10.75 0.00 39.28 3.24
104 105 1.090052 CCTTCGTCGGATCCTTTGCC 61.090 60.000 10.75 0.00 0.00 4.52
125 126 4.712763 CCAGATTTGCAAACTTACTCGTC 58.287 43.478 15.41 5.53 0.00 4.20
151 152 3.135712 ACCGAGTGCCAAATATATGTGGA 59.864 43.478 24.06 7.84 37.03 4.02
152 153 3.498397 CCGAGTGCCAAATATATGTGGAC 59.502 47.826 24.06 17.60 37.03 4.02
156 157 3.569701 GTGCCAAATATATGTGGACTGGG 59.430 47.826 24.06 0.00 37.03 4.45
159 160 4.691376 GCCAAATATATGTGGACTGGGGAA 60.691 45.833 24.06 0.00 37.03 3.97
167 168 1.065126 GTGGACTGGGGAAGATCCAAG 60.065 57.143 0.00 0.00 38.64 3.61
171 172 2.708325 GACTGGGGAAGATCCAAGCTAT 59.292 50.000 0.00 0.00 38.64 2.97
175 176 5.485708 ACTGGGGAAGATCCAAGCTATATAC 59.514 44.000 0.00 0.00 38.64 1.47
200 201 3.970410 CTGGGTTGAGCTGGGCCA 61.970 66.667 5.85 5.85 0.00 5.36
221 222 5.510179 GCCAAGTCCATTAATCCCAATCATG 60.510 44.000 0.00 0.00 0.00 3.07
240 241 4.943093 TCATGTTCAACCCATATGTCACAG 59.057 41.667 1.24 0.00 0.00 3.66
254 255 2.093816 TGTCACAGCATGAGAGGATGAC 60.094 50.000 0.00 1.64 36.06 3.06
266 267 0.399233 AGGATGACCCCTCTAGCACC 60.399 60.000 0.00 0.00 36.73 5.01
273 274 2.786495 CCCTCTAGCACCGCACGAT 61.786 63.158 0.00 0.00 0.00 3.73
274 275 1.589993 CCTCTAGCACCGCACGATG 60.590 63.158 0.00 0.00 0.00 3.84
292 293 0.608035 TGCGGAAGTGATGGAAACCC 60.608 55.000 0.00 0.00 0.00 4.11
314 315 1.600636 TTCCCAAGCAGTTGCCTCG 60.601 57.895 0.00 0.00 43.38 4.63
321 322 1.192146 AGCAGTTGCCTCGAACCCTA 61.192 55.000 0.00 0.00 43.38 3.53
360 361 4.664688 AGAATCCATTTGGTTGTCTCCT 57.335 40.909 0.00 0.00 36.34 3.69
368 369 1.557099 TGGTTGTCTCCTATCAGCGT 58.443 50.000 0.00 0.00 0.00 5.07
374 375 1.592669 CTCCTATCAGCGTTGCCGG 60.593 63.158 0.00 0.00 33.68 6.13
399 436 1.847968 CCGATAGCCCCCTCCCAAT 60.848 63.158 0.00 0.00 0.00 3.16
445 482 0.606401 CTGCCCTCCGAAAGCAAAGA 60.606 55.000 0.00 0.00 35.79 2.52
449 486 1.266989 CCCTCCGAAAGCAAAGACAAC 59.733 52.381 0.00 0.00 0.00 3.32
450 487 2.222027 CCTCCGAAAGCAAAGACAACT 58.778 47.619 0.00 0.00 0.00 3.16
453 490 3.275143 TCCGAAAGCAAAGACAACTTCA 58.725 40.909 0.00 0.00 35.05 3.02
458 495 3.205784 AGCAAAGACAACTTCAGAGCT 57.794 42.857 0.00 0.00 35.05 4.09
462 499 4.513318 GCAAAGACAACTTCAGAGCTTACT 59.487 41.667 0.00 0.00 35.05 2.24
512 549 2.044252 CGACGAGGGAAGAGGGGA 60.044 66.667 0.00 0.00 0.00 4.81
549 586 0.790993 AGGGTCCCCTTCTAGTCACA 59.209 55.000 3.51 0.00 45.70 3.58
553 590 2.168728 GGTCCCCTTCTAGTCACATGTC 59.831 54.545 0.00 0.00 0.00 3.06
559 596 4.142160 CCCTTCTAGTCACATGTCGAATCA 60.142 45.833 0.00 0.00 0.00 2.57
561 598 5.385509 TTCTAGTCACATGTCGAATCACA 57.614 39.130 0.00 0.00 0.00 3.58
584 621 3.153919 GGGCAGAGTGTATGGAAAACAA 58.846 45.455 0.00 0.00 0.00 2.83
585 622 3.763897 GGGCAGAGTGTATGGAAAACAAT 59.236 43.478 0.00 0.00 0.00 2.71
586 623 4.220602 GGGCAGAGTGTATGGAAAACAATT 59.779 41.667 0.00 0.00 0.00 2.32
587 624 5.402398 GGCAGAGTGTATGGAAAACAATTC 58.598 41.667 0.00 0.00 0.00 2.17
588 625 5.088739 GCAGAGTGTATGGAAAACAATTCG 58.911 41.667 0.00 0.00 0.00 3.34
589 626 5.088739 CAGAGTGTATGGAAAACAATTCGC 58.911 41.667 0.00 0.00 0.00 4.70
590 627 5.003804 AGAGTGTATGGAAAACAATTCGCT 58.996 37.500 0.00 0.00 0.00 4.93
591 628 6.092122 CAGAGTGTATGGAAAACAATTCGCTA 59.908 38.462 0.00 0.00 0.00 4.26
592 629 6.313905 AGAGTGTATGGAAAACAATTCGCTAG 59.686 38.462 0.00 0.00 0.00 3.42
593 630 5.028375 GTGTATGGAAAACAATTCGCTAGC 58.972 41.667 4.06 4.06 0.00 3.42
594 631 3.782889 ATGGAAAACAATTCGCTAGCC 57.217 42.857 9.66 0.00 0.00 3.93
595 632 2.509569 TGGAAAACAATTCGCTAGCCA 58.490 42.857 9.66 0.00 0.00 4.75
596 633 3.088532 TGGAAAACAATTCGCTAGCCAT 58.911 40.909 9.66 0.00 0.00 4.40
597 634 3.128589 TGGAAAACAATTCGCTAGCCATC 59.871 43.478 9.66 0.00 0.00 3.51
598 635 3.128589 GGAAAACAATTCGCTAGCCATCA 59.871 43.478 9.66 0.00 0.00 3.07
599 636 3.764885 AAACAATTCGCTAGCCATCAC 57.235 42.857 9.66 0.00 0.00 3.06
600 637 2.698855 ACAATTCGCTAGCCATCACT 57.301 45.000 9.66 0.00 0.00 3.41
601 638 2.555199 ACAATTCGCTAGCCATCACTC 58.445 47.619 9.66 0.00 0.00 3.51
602 639 2.169352 ACAATTCGCTAGCCATCACTCT 59.831 45.455 9.66 0.00 0.00 3.24
603 640 3.201290 CAATTCGCTAGCCATCACTCTT 58.799 45.455 9.66 0.00 0.00 2.85
604 641 2.299993 TTCGCTAGCCATCACTCTTG 57.700 50.000 9.66 0.00 0.00 3.02
605 642 1.474330 TCGCTAGCCATCACTCTTGA 58.526 50.000 9.66 0.00 35.73 3.02
606 643 2.034878 TCGCTAGCCATCACTCTTGAT 58.965 47.619 9.66 0.00 43.80 2.57
607 644 3.222603 TCGCTAGCCATCACTCTTGATA 58.777 45.455 9.66 0.00 40.79 2.15
608 645 3.829026 TCGCTAGCCATCACTCTTGATAT 59.171 43.478 9.66 0.00 40.79 1.63
609 646 4.082517 TCGCTAGCCATCACTCTTGATATC 60.083 45.833 9.66 0.00 40.79 1.63
610 647 4.502962 GCTAGCCATCACTCTTGATATCC 58.497 47.826 2.29 0.00 40.79 2.59
611 648 4.222588 GCTAGCCATCACTCTTGATATCCT 59.777 45.833 2.29 0.00 40.79 3.24
612 649 4.888326 AGCCATCACTCTTGATATCCTC 57.112 45.455 0.00 0.00 40.79 3.71
613 650 3.582208 AGCCATCACTCTTGATATCCTCC 59.418 47.826 0.00 0.00 40.79 4.30
614 651 3.582208 GCCATCACTCTTGATATCCTCCT 59.418 47.826 0.00 0.00 40.79 3.69
615 652 4.774726 GCCATCACTCTTGATATCCTCCTA 59.225 45.833 0.00 0.00 40.79 2.94
616 653 5.247110 GCCATCACTCTTGATATCCTCCTAA 59.753 44.000 0.00 0.00 40.79 2.69
617 654 6.574073 GCCATCACTCTTGATATCCTCCTAAG 60.574 46.154 0.00 0.00 40.79 2.18
618 655 6.070881 CCATCACTCTTGATATCCTCCTAAGG 60.071 46.154 0.00 0.00 40.79 2.69
629 666 1.205893 CCTCCTAAGGACACTCTGTGC 59.794 57.143 0.00 0.00 46.67 4.57
636 673 0.603975 GGACACTCTGTGCCTCCAAC 60.604 60.000 0.00 0.00 36.98 3.77
720 772 6.896021 AGCCATATCCATCAATTCTGAAAG 57.104 37.500 0.00 0.00 34.49 2.62
721 773 6.607970 AGCCATATCCATCAATTCTGAAAGA 58.392 36.000 0.00 0.00 44.68 2.52
737 789 6.814043 TCTGAAAGAGTCCATGATATCTGTG 58.186 40.000 3.98 3.25 38.67 3.66
738 790 5.922053 TGAAAGAGTCCATGATATCTGTGG 58.078 41.667 16.93 16.93 0.00 4.17
739 791 5.662657 TGAAAGAGTCCATGATATCTGTGGA 59.337 40.000 19.98 19.98 39.61 4.02
740 792 5.804944 AAGAGTCCATGATATCTGTGGAG 57.195 43.478 22.73 5.21 42.34 3.86
741 793 3.577848 AGAGTCCATGATATCTGTGGAGC 59.422 47.826 22.73 18.60 42.34 4.70
742 794 3.311990 AGTCCATGATATCTGTGGAGCA 58.688 45.455 22.73 6.94 42.34 4.26
743 795 3.713248 AGTCCATGATATCTGTGGAGCAA 59.287 43.478 22.73 6.67 42.34 3.91
744 796 4.350225 AGTCCATGATATCTGTGGAGCAAT 59.650 41.667 22.73 11.74 42.34 3.56
745 797 4.694509 GTCCATGATATCTGTGGAGCAATC 59.305 45.833 22.73 12.15 42.34 2.67
746 798 4.008330 CCATGATATCTGTGGAGCAATCC 58.992 47.826 17.74 0.00 34.94 3.01
747 799 3.391506 TGATATCTGTGGAGCAATCCG 57.608 47.619 3.98 0.00 0.00 4.18
748 800 2.965147 TGATATCTGTGGAGCAATCCGA 59.035 45.455 3.98 0.00 0.00 4.55
749 801 3.006217 TGATATCTGTGGAGCAATCCGAG 59.994 47.826 3.98 0.00 0.00 4.63
750 802 0.179062 ATCTGTGGAGCAATCCGAGC 60.179 55.000 0.00 0.00 0.00 5.03
751 803 1.220206 CTGTGGAGCAATCCGAGCT 59.780 57.895 0.00 0.00 46.82 4.09
752 804 1.078918 TGTGGAGCAATCCGAGCTG 60.079 57.895 0.00 0.00 43.58 4.24
753 805 1.078848 GTGGAGCAATCCGAGCTGT 60.079 57.895 0.00 0.00 43.58 4.40
754 806 1.086634 GTGGAGCAATCCGAGCTGTC 61.087 60.000 0.00 0.00 43.58 3.51
755 807 1.880340 GGAGCAATCCGAGCTGTCG 60.880 63.158 0.00 0.00 43.58 4.35
778 830 5.561499 CGAATTCATGTGAGCAATAATACGC 59.439 40.000 6.22 0.00 0.00 4.42
804 856 0.744414 ATCGATCCCAACGGCACAAG 60.744 55.000 0.00 0.00 0.00 3.16
821 873 2.676342 ACAAGCTCGGCGTAAAAATAGG 59.324 45.455 6.85 0.00 0.00 2.57
822 874 2.933906 CAAGCTCGGCGTAAAAATAGGA 59.066 45.455 6.85 0.00 0.00 2.94
1113 1206 1.521141 GTCGGGGCTCCTTAACCTC 59.479 63.158 0.00 0.00 0.00 3.85
1660 1791 2.623889 AGAGCGACGCATAGGTAGAAAT 59.376 45.455 23.70 0.00 0.00 2.17
1664 1795 5.162075 AGCGACGCATAGGTAGAAATAATC 58.838 41.667 23.70 0.00 0.00 1.75
1666 1797 5.404366 GCGACGCATAGGTAGAAATAATCAA 59.596 40.000 16.42 0.00 0.00 2.57
1667 1798 6.073980 GCGACGCATAGGTAGAAATAATCAAA 60.074 38.462 16.42 0.00 0.00 2.69
1668 1799 7.360101 GCGACGCATAGGTAGAAATAATCAAAT 60.360 37.037 16.42 0.00 0.00 2.32
1669 1800 7.952101 CGACGCATAGGTAGAAATAATCAAATG 59.048 37.037 0.00 0.00 0.00 2.32
1670 1801 8.099364 ACGCATAGGTAGAAATAATCAAATGG 57.901 34.615 0.00 0.00 0.00 3.16
1671 1802 7.023575 CGCATAGGTAGAAATAATCAAATGGC 58.976 38.462 0.00 0.00 0.00 4.40
1674 1805 4.278419 AGGTAGAAATAATCAAATGGCCGC 59.722 41.667 0.00 0.00 0.00 6.53
1677 1808 2.888834 AATAATCAAATGGCCGCACC 57.111 45.000 0.00 0.00 39.84 5.01
1691 1822 1.586422 CGCACCAACAGATAGATGGG 58.414 55.000 0.00 0.00 44.04 4.00
1692 1823 1.312815 GCACCAACAGATAGATGGGC 58.687 55.000 0.00 0.00 44.04 5.36
1693 1824 1.972872 CACCAACAGATAGATGGGCC 58.027 55.000 0.00 0.00 44.04 5.80
1694 1825 0.469917 ACCAACAGATAGATGGGCCG 59.530 55.000 0.00 0.00 44.04 6.13
1695 1826 0.250467 CCAACAGATAGATGGGCCGG 60.250 60.000 0.00 0.00 36.57 6.13
1758 1897 2.246469 ACGGGAGAGGAGATGATCATG 58.754 52.381 14.30 0.00 0.00 3.07
1766 1907 5.396485 AGAGGAGATGATCATGTAGAAGCT 58.604 41.667 14.30 1.32 0.00 3.74
1799 1940 1.280457 AGGTGGTTCTCATCAGGGTC 58.720 55.000 0.00 0.00 0.00 4.46
1936 2087 3.802685 GCTCACGTACATTCAACCCTATC 59.197 47.826 0.00 0.00 0.00 2.08
1944 2095 1.434555 TTCAACCCTATCAACGCACG 58.565 50.000 0.00 0.00 0.00 5.34
1952 2103 1.881641 TATCAACGCACGCACACACG 61.882 55.000 0.00 0.00 39.50 4.49
1987 2138 5.189928 TGAGTGTTGAAATATATTGCCCGT 58.810 37.500 0.00 0.00 0.00 5.28
1995 2146 4.442375 AATATATTGCCCGTCTCTCTCG 57.558 45.455 0.00 0.00 0.00 4.04
2050 2201 7.008332 AGAGCATGAATTCAATATGGAATCCA 58.992 34.615 13.09 3.67 36.51 3.41
2052 2203 8.202461 AGCATGAATTCAATATGGAATCCAAT 57.798 30.769 13.09 0.00 36.95 3.16
2053 2204 8.311836 AGCATGAATTCAATATGGAATCCAATC 58.688 33.333 13.09 1.20 36.95 2.67
2054 2205 8.092068 GCATGAATTCAATATGGAATCCAATCA 58.908 33.333 13.09 6.60 36.95 2.57
2067 2221 8.716185 ATGGAATCCAATCAAGGTCTTGAGTTG 61.716 40.741 5.89 17.73 44.23 3.16
2089 2245 0.107654 GACTCTGCCAAGGCGGTATT 60.108 55.000 18.80 5.26 46.77 1.89
2101 2257 7.147811 TGCCAAGGCGGTATTAAAATAAGATTT 60.148 33.333 6.60 0.00 45.51 2.17
2107 2263 6.693978 GCGGTATTAAAATAAGATTTTGCGGT 59.306 34.615 7.30 0.00 0.00 5.68
2108 2264 7.096763 GCGGTATTAAAATAAGATTTTGCGGTC 60.097 37.037 7.30 0.00 0.00 4.79
2109 2265 8.126700 CGGTATTAAAATAAGATTTTGCGGTCT 58.873 33.333 7.30 0.00 0.00 3.85
2110 2266 9.797556 GGTATTAAAATAAGATTTTGCGGTCTT 57.202 29.630 7.30 0.00 38.22 3.01
2116 2272 7.865706 AATAAGATTTTGCGGTCTTCATAGT 57.134 32.000 0.00 0.00 36.23 2.12
2117 2273 7.865706 ATAAGATTTTGCGGTCTTCATAGTT 57.134 32.000 0.00 0.00 36.23 2.24
2118 2274 5.551760 AGATTTTGCGGTCTTCATAGTTG 57.448 39.130 0.00 0.00 0.00 3.16
2119 2275 5.003804 AGATTTTGCGGTCTTCATAGTTGT 58.996 37.500 0.00 0.00 0.00 3.32
2120 2276 4.481930 TTTTGCGGTCTTCATAGTTGTG 57.518 40.909 0.00 0.00 0.00 3.33
2121 2277 2.093306 TGCGGTCTTCATAGTTGTGG 57.907 50.000 0.00 0.00 0.00 4.17
2122 2278 0.727398 GCGGTCTTCATAGTTGTGGC 59.273 55.000 0.00 0.00 0.00 5.01
2123 2279 1.369625 CGGTCTTCATAGTTGTGGCC 58.630 55.000 0.00 0.00 0.00 5.36
2124 2280 1.338674 CGGTCTTCATAGTTGTGGCCA 60.339 52.381 0.00 0.00 0.00 5.36
2125 2281 2.359900 GGTCTTCATAGTTGTGGCCAG 58.640 52.381 5.11 0.00 0.00 4.85
2126 2282 2.027192 GGTCTTCATAGTTGTGGCCAGA 60.027 50.000 5.11 0.00 0.00 3.86
2127 2283 3.265791 GTCTTCATAGTTGTGGCCAGAG 58.734 50.000 5.11 0.00 0.00 3.35
2128 2284 2.237143 TCTTCATAGTTGTGGCCAGAGG 59.763 50.000 5.11 0.00 0.00 3.69
2138 2294 2.507944 GCCAGAGGCGATGGTGAT 59.492 61.111 11.84 0.00 39.62 3.06
2139 2295 1.890979 GCCAGAGGCGATGGTGATG 60.891 63.158 11.84 0.00 39.62 3.07
2140 2296 1.825341 CCAGAGGCGATGGTGATGA 59.175 57.895 3.15 0.00 32.85 2.92
2508 2664 5.277857 AGTTCGGTGACCTATAATCCAAG 57.722 43.478 0.00 0.00 0.00 3.61
2509 2665 4.960469 AGTTCGGTGACCTATAATCCAAGA 59.040 41.667 0.00 0.00 0.00 3.02
2510 2666 5.602978 AGTTCGGTGACCTATAATCCAAGAT 59.397 40.000 0.00 0.00 0.00 2.40
2511 2667 5.468540 TCGGTGACCTATAATCCAAGATG 57.531 43.478 0.00 0.00 0.00 2.90
2512 2668 5.144832 TCGGTGACCTATAATCCAAGATGA 58.855 41.667 0.00 0.00 0.00 2.92
2513 2669 5.243954 TCGGTGACCTATAATCCAAGATGAG 59.756 44.000 0.00 0.00 0.00 2.90
2514 2670 5.243954 CGGTGACCTATAATCCAAGATGAGA 59.756 44.000 0.00 0.00 0.00 3.27
2515 2671 6.071108 CGGTGACCTATAATCCAAGATGAGAT 60.071 42.308 0.00 0.00 0.00 2.75
2516 2672 7.102346 GGTGACCTATAATCCAAGATGAGATG 58.898 42.308 0.00 0.00 0.00 2.90
2517 2673 7.102346 GTGACCTATAATCCAAGATGAGATGG 58.898 42.308 0.00 0.00 38.09 3.51
2518 2674 6.059787 ACCTATAATCCAAGATGAGATGGC 57.940 41.667 0.00 0.00 36.62 4.40
2519 2675 5.549228 ACCTATAATCCAAGATGAGATGGCA 59.451 40.000 0.00 0.00 36.62 4.92
2520 2676 6.114089 CCTATAATCCAAGATGAGATGGCAG 58.886 44.000 0.00 0.00 36.62 4.85
2521 2677 2.953284 ATCCAAGATGAGATGGCAGG 57.047 50.000 0.00 0.00 36.62 4.85
2522 2678 0.841961 TCCAAGATGAGATGGCAGGG 59.158 55.000 0.00 0.00 36.62 4.45
2523 2679 0.178998 CCAAGATGAGATGGCAGGGG 60.179 60.000 0.00 0.00 0.00 4.79
2524 2680 0.822532 CAAGATGAGATGGCAGGGGC 60.823 60.000 0.00 0.00 40.13 5.80
2535 2691 3.410960 GCAGGGGCCATCTTCTAAG 57.589 57.895 4.39 0.00 0.00 2.18
2536 2692 0.179006 GCAGGGGCCATCTTCTAAGG 60.179 60.000 4.39 0.00 0.00 2.69
2541 2697 3.297391 GCCATCTTCTAAGGCGGAG 57.703 57.895 0.00 0.00 38.86 4.63
2542 2698 0.753262 GCCATCTTCTAAGGCGGAGA 59.247 55.000 0.00 0.00 38.86 3.71
2543 2699 1.346068 GCCATCTTCTAAGGCGGAGAT 59.654 52.381 0.00 0.00 38.86 2.75
2544 2700 2.869636 GCCATCTTCTAAGGCGGAGATG 60.870 54.545 5.46 5.46 38.86 2.90
2545 2701 2.289320 CCATCTTCTAAGGCGGAGATGG 60.289 54.545 14.65 14.65 44.23 3.51
2546 2702 2.454336 TCTTCTAAGGCGGAGATGGA 57.546 50.000 5.26 0.30 0.00 3.41
2547 2703 2.964209 TCTTCTAAGGCGGAGATGGAT 58.036 47.619 5.26 0.00 0.00 3.41
2548 2704 2.630098 TCTTCTAAGGCGGAGATGGATG 59.370 50.000 5.26 0.00 0.00 3.51
2549 2705 2.088104 TCTAAGGCGGAGATGGATGT 57.912 50.000 0.00 0.00 0.00 3.06
2550 2706 1.964223 TCTAAGGCGGAGATGGATGTC 59.036 52.381 0.00 0.00 0.00 3.06
2551 2707 1.001406 CTAAGGCGGAGATGGATGTCC 59.999 57.143 0.00 0.00 36.91 4.02
2564 2720 4.698201 TGGATGTCCAAACTGTTAGACA 57.302 40.909 21.37 21.37 44.35 3.41
2565 2721 5.042463 TGGATGTCCAAACTGTTAGACAA 57.958 39.130 22.36 9.89 44.35 3.18
2566 2722 5.063204 TGGATGTCCAAACTGTTAGACAAG 58.937 41.667 22.36 0.00 44.35 3.16
2567 2723 5.063880 GGATGTCCAAACTGTTAGACAAGT 58.936 41.667 22.36 12.29 42.14 3.16
2568 2724 6.183361 TGGATGTCCAAACTGTTAGACAAGTA 60.183 38.462 22.36 12.85 44.35 2.24
2569 2725 6.708949 GGATGTCCAAACTGTTAGACAAGTAA 59.291 38.462 22.36 6.70 42.14 2.24
2570 2726 7.390718 GGATGTCCAAACTGTTAGACAAGTAAT 59.609 37.037 22.36 11.23 42.14 1.89
2571 2727 7.724305 TGTCCAAACTGTTAGACAAGTAATC 57.276 36.000 18.53 0.00 36.36 1.75
2572 2728 6.708949 TGTCCAAACTGTTAGACAAGTAATCC 59.291 38.462 18.53 0.00 36.36 3.01
2573 2729 6.148976 GTCCAAACTGTTAGACAAGTAATCCC 59.851 42.308 15.06 0.00 0.00 3.85
2574 2730 5.121768 CCAAACTGTTAGACAAGTAATCCCG 59.878 44.000 0.00 0.00 0.00 5.14
2575 2731 5.479124 AACTGTTAGACAAGTAATCCCGT 57.521 39.130 0.00 0.00 0.00 5.28
2576 2732 6.594788 AACTGTTAGACAAGTAATCCCGTA 57.405 37.500 0.00 0.00 0.00 4.02
2577 2733 6.205101 ACTGTTAGACAAGTAATCCCGTAG 57.795 41.667 0.00 0.00 0.00 3.51
2596 2752 6.542574 CGTAGGATCTACTTAACAGATCGT 57.457 41.667 16.13 16.13 46.26 3.73
2597 2753 7.649370 CGTAGGATCTACTTAACAGATCGTA 57.351 40.000 14.80 14.80 46.26 3.43
2598 2754 8.081208 CGTAGGATCTACTTAACAGATCGTAA 57.919 38.462 17.87 6.27 46.26 3.18
2599 2755 8.222433 CGTAGGATCTACTTAACAGATCGTAAG 58.778 40.741 17.87 16.64 46.26 2.34
2600 2756 6.972722 AGGATCTACTTAACAGATCGTAAGC 58.027 40.000 12.56 3.34 46.26 3.09
2601 2757 6.016108 AGGATCTACTTAACAGATCGTAAGCC 60.016 42.308 12.56 6.58 46.26 4.35
2602 2758 6.016108 GGATCTACTTAACAGATCGTAAGCCT 60.016 42.308 12.82 0.69 46.26 4.58
2603 2759 7.174599 GGATCTACTTAACAGATCGTAAGCCTA 59.825 40.741 12.82 1.53 46.26 3.93
2604 2760 7.493743 TCTACTTAACAGATCGTAAGCCTAG 57.506 40.000 11.52 8.37 37.18 3.02
2605 2761 7.052873 TCTACTTAACAGATCGTAAGCCTAGT 58.947 38.462 11.52 0.00 37.18 2.57
2606 2762 6.134040 ACTTAACAGATCGTAAGCCTAGTC 57.866 41.667 11.52 0.00 37.18 2.59
2607 2763 5.651139 ACTTAACAGATCGTAAGCCTAGTCA 59.349 40.000 11.52 0.00 37.18 3.41
2608 2764 6.321690 ACTTAACAGATCGTAAGCCTAGTCAT 59.678 38.462 11.52 0.00 37.18 3.06
2609 2765 5.599999 AACAGATCGTAAGCCTAGTCATT 57.400 39.130 0.00 0.00 37.18 2.57
2610 2766 6.710597 AACAGATCGTAAGCCTAGTCATTA 57.289 37.500 0.00 0.00 37.18 1.90
2611 2767 6.320494 ACAGATCGTAAGCCTAGTCATTAG 57.680 41.667 0.00 0.00 37.18 1.73
2612 2768 6.062749 ACAGATCGTAAGCCTAGTCATTAGA 58.937 40.000 0.00 0.00 37.18 2.10
2613 2769 6.717540 ACAGATCGTAAGCCTAGTCATTAGAT 59.282 38.462 0.00 0.00 37.18 1.98
2614 2770 7.094549 ACAGATCGTAAGCCTAGTCATTAGATC 60.095 40.741 0.00 0.00 37.18 2.75
2615 2771 6.943146 AGATCGTAAGCCTAGTCATTAGATCA 59.057 38.462 0.00 0.00 34.82 2.92
2616 2772 6.315091 TCGTAAGCCTAGTCATTAGATCAC 57.685 41.667 0.00 0.00 37.18 3.06
2617 2773 5.241064 TCGTAAGCCTAGTCATTAGATCACC 59.759 44.000 0.00 0.00 37.18 4.02
2618 2774 5.241949 CGTAAGCCTAGTCATTAGATCACCT 59.758 44.000 0.00 0.00 0.00 4.00
2619 2775 6.430308 CGTAAGCCTAGTCATTAGATCACCTA 59.570 42.308 0.00 0.00 0.00 3.08
2620 2776 7.121463 CGTAAGCCTAGTCATTAGATCACCTAT 59.879 40.741 0.00 0.00 0.00 2.57
2621 2777 7.863901 AAGCCTAGTCATTAGATCACCTATT 57.136 36.000 0.00 0.00 0.00 1.73
2622 2778 7.863901 AGCCTAGTCATTAGATCACCTATTT 57.136 36.000 0.00 0.00 0.00 1.40
2623 2779 7.675062 AGCCTAGTCATTAGATCACCTATTTG 58.325 38.462 0.00 0.00 0.00 2.32
2624 2780 6.370166 GCCTAGTCATTAGATCACCTATTTGC 59.630 42.308 0.00 0.00 0.00 3.68
2625 2781 7.445121 CCTAGTCATTAGATCACCTATTTGCA 58.555 38.462 0.00 0.00 0.00 4.08
2626 2782 8.099537 CCTAGTCATTAGATCACCTATTTGCAT 58.900 37.037 0.00 0.00 0.00 3.96
2634 2790 9.625747 TTAGATCACCTATTTGCATAATGAACA 57.374 29.630 0.00 0.00 0.00 3.18
2635 2791 8.162878 AGATCACCTATTTGCATAATGAACAG 57.837 34.615 0.00 0.00 0.00 3.16
2636 2792 7.994911 AGATCACCTATTTGCATAATGAACAGA 59.005 33.333 0.00 0.00 0.00 3.41
2637 2793 7.558161 TCACCTATTTGCATAATGAACAGAG 57.442 36.000 0.00 0.00 0.00 3.35
2638 2794 6.543465 TCACCTATTTGCATAATGAACAGAGG 59.457 38.462 0.00 0.00 0.00 3.69
2639 2795 5.829924 ACCTATTTGCATAATGAACAGAGGG 59.170 40.000 0.00 0.00 0.00 4.30
2640 2796 6.064060 CCTATTTGCATAATGAACAGAGGGA 58.936 40.000 0.00 0.00 0.00 4.20
2641 2797 6.718454 CCTATTTGCATAATGAACAGAGGGAT 59.282 38.462 0.00 0.00 0.00 3.85
2642 2798 5.840243 TTTGCATAATGAACAGAGGGATG 57.160 39.130 0.00 0.00 0.00 3.51
2643 2799 3.824133 TGCATAATGAACAGAGGGATGG 58.176 45.455 0.00 0.00 0.00 3.51
2644 2800 3.459227 TGCATAATGAACAGAGGGATGGA 59.541 43.478 0.00 0.00 0.00 3.41
2645 2801 4.105217 TGCATAATGAACAGAGGGATGGAT 59.895 41.667 0.00 0.00 0.00 3.41
2646 2802 5.075493 GCATAATGAACAGAGGGATGGATT 58.925 41.667 0.00 0.00 0.00 3.01
2647 2803 5.048224 GCATAATGAACAGAGGGATGGATTG 60.048 44.000 0.00 0.00 0.00 2.67
2648 2804 4.868172 AATGAACAGAGGGATGGATTGA 57.132 40.909 0.00 0.00 0.00 2.57
2649 2805 5.399052 AATGAACAGAGGGATGGATTGAT 57.601 39.130 0.00 0.00 0.00 2.57
2650 2806 4.160642 TGAACAGAGGGATGGATTGATG 57.839 45.455 0.00 0.00 0.00 3.07
2651 2807 3.781965 TGAACAGAGGGATGGATTGATGA 59.218 43.478 0.00 0.00 0.00 2.92
2652 2808 4.414514 TGAACAGAGGGATGGATTGATGAT 59.585 41.667 0.00 0.00 0.00 2.45
2653 2809 4.637387 ACAGAGGGATGGATTGATGATC 57.363 45.455 0.00 0.00 0.00 2.92
2654 2810 4.241151 ACAGAGGGATGGATTGATGATCT 58.759 43.478 0.00 0.00 35.02 2.75
2655 2811 4.664064 ACAGAGGGATGGATTGATGATCTT 59.336 41.667 0.00 0.00 35.02 2.40
2656 2812 5.848369 ACAGAGGGATGGATTGATGATCTTA 59.152 40.000 0.00 0.00 35.02 2.10
2657 2813 6.171921 CAGAGGGATGGATTGATGATCTTAC 58.828 44.000 0.00 0.00 35.02 2.34
2658 2814 5.250313 AGAGGGATGGATTGATGATCTTACC 59.750 44.000 0.00 0.00 35.02 2.85
2659 2815 4.915809 AGGGATGGATTGATGATCTTACCA 59.084 41.667 7.27 7.27 35.02 3.25
2660 2816 5.006386 GGGATGGATTGATGATCTTACCAC 58.994 45.833 7.05 3.48 35.02 4.16
2661 2817 5.006386 GGATGGATTGATGATCTTACCACC 58.994 45.833 7.05 7.30 35.02 4.61
2662 2818 5.456619 GGATGGATTGATGATCTTACCACCA 60.457 44.000 7.05 0.00 35.02 4.17
2663 2819 5.449297 TGGATTGATGATCTTACCACCAA 57.551 39.130 0.00 0.00 35.02 3.67
2664 2820 6.017211 TGGATTGATGATCTTACCACCAAT 57.983 37.500 0.00 0.00 35.02 3.16
2665 2821 5.829391 TGGATTGATGATCTTACCACCAATG 59.171 40.000 0.00 0.00 35.02 2.82
2666 2822 5.242393 GGATTGATGATCTTACCACCAATGG 59.758 44.000 0.00 0.00 42.21 3.16
2667 2823 6.916705 GGATTGATGATCTTACCACCAATGGA 60.917 42.308 6.16 0.00 40.53 3.41
2668 2824 8.342511 GGATTGATGATCTTACCACCAATGGAA 61.343 40.741 6.16 0.00 40.53 3.53
2681 2837 3.602104 ATGGAAGAGGCCATTGGTG 57.398 52.632 5.01 0.00 46.29 4.17
2682 2838 0.706433 ATGGAAGAGGCCATTGGTGT 59.294 50.000 5.01 0.00 46.29 4.16
2683 2839 1.367346 TGGAAGAGGCCATTGGTGTA 58.633 50.000 5.01 0.00 31.66 2.90
2684 2840 1.281867 TGGAAGAGGCCATTGGTGTAG 59.718 52.381 5.01 0.00 31.66 2.74
2685 2841 1.408822 GGAAGAGGCCATTGGTGTAGG 60.409 57.143 5.01 0.00 0.00 3.18
2689 2845 4.559502 GCCATTGGTGTAGGCGAT 57.440 55.556 4.26 0.00 38.86 4.58
2690 2846 2.024918 GCCATTGGTGTAGGCGATG 58.975 57.895 4.26 0.00 38.86 3.84
2691 2847 2.024918 CCATTGGTGTAGGCGATGC 58.975 57.895 0.00 0.00 0.00 3.91
2692 2848 1.643292 CATTGGTGTAGGCGATGCG 59.357 57.895 0.00 0.00 0.00 4.73
2693 2849 0.809636 CATTGGTGTAGGCGATGCGA 60.810 55.000 0.00 0.00 0.00 5.10
2694 2850 0.107897 ATTGGTGTAGGCGATGCGAA 60.108 50.000 0.00 0.00 0.00 4.70
2695 2851 0.739462 TTGGTGTAGGCGATGCGAAG 60.739 55.000 0.00 0.00 0.00 3.79
2696 2852 1.153628 GGTGTAGGCGATGCGAAGT 60.154 57.895 0.00 0.00 0.00 3.01
2697 2853 1.146358 GGTGTAGGCGATGCGAAGTC 61.146 60.000 0.00 0.00 0.00 3.01
2698 2854 1.141019 TGTAGGCGATGCGAAGTCC 59.859 57.895 0.00 0.00 0.00 3.85
2699 2855 1.591863 GTAGGCGATGCGAAGTCCC 60.592 63.158 0.00 0.00 0.00 4.46
2700 2856 3.133767 TAGGCGATGCGAAGTCCCG 62.134 63.158 0.00 0.00 0.00 5.14
2701 2857 4.814294 GGCGATGCGAAGTCCCGT 62.814 66.667 0.00 0.00 0.00 5.28
2702 2858 3.554692 GCGATGCGAAGTCCCGTG 61.555 66.667 0.00 0.00 0.00 4.94
2703 2859 3.554692 CGATGCGAAGTCCCGTGC 61.555 66.667 0.00 0.00 0.00 5.34
2704 2860 3.195698 GATGCGAAGTCCCGTGCC 61.196 66.667 0.00 0.00 0.00 5.01
2705 2861 3.665675 GATGCGAAGTCCCGTGCCT 62.666 63.158 0.00 0.00 0.00 4.75
2706 2862 3.958147 ATGCGAAGTCCCGTGCCTG 62.958 63.158 0.00 0.00 0.00 4.85
2708 2864 4.379243 CGAAGTCCCGTGCCTGCT 62.379 66.667 0.00 0.00 0.00 4.24
2709 2865 2.435059 GAAGTCCCGTGCCTGCTC 60.435 66.667 0.00 0.00 0.00 4.26
2710 2866 4.379243 AAGTCCCGTGCCTGCTCG 62.379 66.667 6.62 6.62 0.00 5.03
2712 2868 4.148825 GTCCCGTGCCTGCTCGAT 62.149 66.667 14.42 0.00 35.30 3.59
2713 2869 4.147449 TCCCGTGCCTGCTCGATG 62.147 66.667 14.42 6.08 35.30 3.84
2723 2879 3.096791 GCTCGATGCAGGCTTGAC 58.903 61.111 0.00 0.00 42.31 3.18
2724 2880 1.742880 GCTCGATGCAGGCTTGACA 60.743 57.895 0.00 0.00 42.31 3.58
2725 2881 1.975363 GCTCGATGCAGGCTTGACAC 61.975 60.000 0.00 0.00 42.31 3.67
2726 2882 0.671472 CTCGATGCAGGCTTGACACA 60.671 55.000 0.00 0.00 0.00 3.72
2727 2883 0.671472 TCGATGCAGGCTTGACACAG 60.671 55.000 0.00 0.00 0.00 3.66
2728 2884 1.642037 CGATGCAGGCTTGACACAGG 61.642 60.000 0.00 0.00 0.00 4.00
2729 2885 1.930908 GATGCAGGCTTGACACAGGC 61.931 60.000 0.00 0.00 39.69 4.85
2731 2887 2.331132 GCAGGCTTGACACAGGCTC 61.331 63.158 0.00 4.14 46.50 4.70
2732 2888 2.031516 CAGGCTTGACACAGGCTCG 61.032 63.158 9.65 4.58 46.50 5.03
2733 2889 2.743928 GGCTTGACACAGGCTCGG 60.744 66.667 5.90 0.00 36.68 4.63
2734 2890 2.031163 GCTTGACACAGGCTCGGT 59.969 61.111 0.00 0.00 33.60 4.69
2735 2891 2.320587 GCTTGACACAGGCTCGGTG 61.321 63.158 3.62 3.62 41.95 4.94
2739 2895 4.513777 ACACAGGCTCGGTGTAGA 57.486 55.556 8.70 0.00 46.94 2.59
2740 2896 2.977578 ACACAGGCTCGGTGTAGAT 58.022 52.632 8.70 0.00 46.94 1.98
2741 2897 0.532573 ACACAGGCTCGGTGTAGATG 59.467 55.000 8.70 0.00 46.94 2.90
2742 2898 0.807667 CACAGGCTCGGTGTAGATGC 60.808 60.000 0.00 0.00 0.00 3.91
2743 2899 0.972983 ACAGGCTCGGTGTAGATGCT 60.973 55.000 0.00 0.00 0.00 3.79
2744 2900 0.249238 CAGGCTCGGTGTAGATGCTC 60.249 60.000 0.00 0.00 0.00 4.26
2745 2901 1.299468 GGCTCGGTGTAGATGCTCG 60.299 63.158 0.00 0.00 0.00 5.03
2746 2902 1.946650 GCTCGGTGTAGATGCTCGC 60.947 63.158 0.00 0.00 0.00 5.03
2747 2903 1.730487 CTCGGTGTAGATGCTCGCT 59.270 57.895 0.00 0.00 0.00 4.93
2748 2904 0.593518 CTCGGTGTAGATGCTCGCTG 60.594 60.000 0.00 0.00 0.00 5.18
2749 2905 2.233654 CGGTGTAGATGCTCGCTGC 61.234 63.158 0.00 0.00 43.25 5.25
2766 2922 4.208686 CAGGTAGCGGCGTCCCTC 62.209 72.222 9.37 0.00 0.00 4.30
2803 2959 4.463879 CCTGGCACCGGAGCAGAG 62.464 72.222 25.48 18.64 35.83 3.35
2804 2960 4.463879 CTGGCACCGGAGCAGAGG 62.464 72.222 25.48 8.05 35.83 3.69
2806 2962 3.075005 GGCACCGGAGCAGAGGTA 61.075 66.667 25.48 0.00 39.00 3.08
2807 2963 2.496817 GCACCGGAGCAGAGGTAG 59.503 66.667 19.70 0.00 39.00 3.18
2808 2964 3.082579 GCACCGGAGCAGAGGTAGG 62.083 68.421 19.70 0.00 39.00 3.18
2809 2965 1.379977 CACCGGAGCAGAGGTAGGA 60.380 63.158 9.46 0.00 39.00 2.94
2810 2966 1.076632 ACCGGAGCAGAGGTAGGAG 60.077 63.158 9.46 0.00 39.30 3.69
2811 2967 1.830408 CCGGAGCAGAGGTAGGAGG 60.830 68.421 0.00 0.00 0.00 4.30
2812 2968 1.227664 CGGAGCAGAGGTAGGAGGA 59.772 63.158 0.00 0.00 0.00 3.71
2813 2969 0.821711 CGGAGCAGAGGTAGGAGGAG 60.822 65.000 0.00 0.00 0.00 3.69
2814 2970 0.469144 GGAGCAGAGGTAGGAGGAGG 60.469 65.000 0.00 0.00 0.00 4.30
2815 2971 1.075600 AGCAGAGGTAGGAGGAGGC 60.076 63.158 0.00 0.00 0.00 4.70
2816 2972 2.137528 GCAGAGGTAGGAGGAGGCC 61.138 68.421 0.00 0.00 0.00 5.19
2817 2973 1.623625 CAGAGGTAGGAGGAGGCCT 59.376 63.158 3.86 3.86 42.15 5.19
2818 2974 0.031616 CAGAGGTAGGAGGAGGCCTT 60.032 60.000 6.77 0.00 39.50 4.35
2819 2975 0.263468 AGAGGTAGGAGGAGGCCTTC 59.737 60.000 6.77 3.97 39.50 3.46
2827 2983 4.344865 GGAGGCCTTCCCGTTGCA 62.345 66.667 6.77 0.00 40.37 4.08
2828 2984 3.056328 GAGGCCTTCCCGTTGCAC 61.056 66.667 6.77 0.00 39.21 4.57
2829 2985 3.842925 GAGGCCTTCCCGTTGCACA 62.843 63.158 6.77 0.00 39.21 4.57
2830 2986 2.909965 GGCCTTCCCGTTGCACAA 60.910 61.111 0.00 0.00 0.00 3.33
2831 2987 2.335011 GCCTTCCCGTTGCACAAC 59.665 61.111 3.37 3.37 37.92 3.32
2839 2995 2.517402 GTTGCACAACGTCCCCCA 60.517 61.111 0.00 0.00 0.00 4.96
2840 2996 2.203280 TTGCACAACGTCCCCCAG 60.203 61.111 0.00 0.00 0.00 4.45
2841 2997 2.747443 TTGCACAACGTCCCCCAGA 61.747 57.895 0.00 0.00 0.00 3.86
2842 2998 2.063015 TTGCACAACGTCCCCCAGAT 62.063 55.000 0.00 0.00 0.00 2.90
2843 2999 1.745489 GCACAACGTCCCCCAGATC 60.745 63.158 0.00 0.00 0.00 2.75
2844 3000 1.447838 CACAACGTCCCCCAGATCG 60.448 63.158 0.00 0.00 0.00 3.69
2845 3001 2.186903 CAACGTCCCCCAGATCGG 59.813 66.667 0.00 0.00 0.00 4.18
2846 3002 2.038329 AACGTCCCCCAGATCGGA 59.962 61.111 5.32 0.00 36.56 4.55
2847 3003 1.382695 AACGTCCCCCAGATCGGAT 60.383 57.895 5.32 0.00 36.56 4.18
2848 3004 0.981277 AACGTCCCCCAGATCGGATT 60.981 55.000 5.32 0.00 36.56 3.01
2849 3005 0.105862 ACGTCCCCCAGATCGGATTA 60.106 55.000 5.32 0.00 36.56 1.75
2850 3006 0.603569 CGTCCCCCAGATCGGATTAG 59.396 60.000 5.32 0.00 36.56 1.73
2851 3007 0.977395 GTCCCCCAGATCGGATTAGG 59.023 60.000 5.32 0.00 36.56 2.69
2852 3008 0.178903 TCCCCCAGATCGGATTAGGG 60.179 60.000 17.28 17.28 39.29 3.53
2853 3009 0.473886 CCCCCAGATCGGATTAGGGT 60.474 60.000 20.59 0.00 37.84 4.34
2854 3010 1.435256 CCCCAGATCGGATTAGGGTT 58.565 55.000 20.59 0.00 37.84 4.11
2855 3011 1.774856 CCCCAGATCGGATTAGGGTTT 59.225 52.381 20.59 0.00 37.84 3.27
2856 3012 2.976882 CCCCAGATCGGATTAGGGTTTA 59.023 50.000 20.59 0.00 37.84 2.01
2857 3013 3.008049 CCCCAGATCGGATTAGGGTTTAG 59.992 52.174 20.59 7.64 37.84 1.85
2858 3014 3.008049 CCCAGATCGGATTAGGGTTTAGG 59.992 52.174 16.42 0.00 36.56 2.69
2859 3015 3.008049 CCAGATCGGATTAGGGTTTAGGG 59.992 52.174 0.00 0.00 36.56 3.53
2860 3016 3.901844 CAGATCGGATTAGGGTTTAGGGA 59.098 47.826 0.00 0.00 0.00 4.20
2861 3017 4.532521 CAGATCGGATTAGGGTTTAGGGAT 59.467 45.833 0.00 0.00 0.00 3.85
2862 3018 5.013183 CAGATCGGATTAGGGTTTAGGGATT 59.987 44.000 0.00 0.00 0.00 3.01
2863 3019 5.611408 AGATCGGATTAGGGTTTAGGGATTT 59.389 40.000 0.00 0.00 0.00 2.17
2864 3020 6.790963 AGATCGGATTAGGGTTTAGGGATTTA 59.209 38.462 0.00 0.00 0.00 1.40
2865 3021 6.429521 TCGGATTAGGGTTTAGGGATTTAG 57.570 41.667 0.00 0.00 0.00 1.85
2866 3022 5.308759 TCGGATTAGGGTTTAGGGATTTAGG 59.691 44.000 0.00 0.00 0.00 2.69
2867 3023 5.308759 CGGATTAGGGTTTAGGGATTTAGGA 59.691 44.000 0.00 0.00 0.00 2.94
2868 3024 6.520231 CGGATTAGGGTTTAGGGATTTAGGAG 60.520 46.154 0.00 0.00 0.00 3.69
2869 3025 6.240205 GGATTAGGGTTTAGGGATTTAGGAGG 60.240 46.154 0.00 0.00 0.00 4.30
2870 3026 3.404292 AGGGTTTAGGGATTTAGGAGGG 58.596 50.000 0.00 0.00 0.00 4.30
2871 3027 2.158505 GGGTTTAGGGATTTAGGAGGGC 60.159 54.545 0.00 0.00 0.00 5.19
2872 3028 2.512476 GGTTTAGGGATTTAGGAGGGCA 59.488 50.000 0.00 0.00 0.00 5.36
2873 3029 3.053170 GGTTTAGGGATTTAGGAGGGCAA 60.053 47.826 0.00 0.00 0.00 4.52
2874 3030 4.571148 GGTTTAGGGATTTAGGAGGGCAAA 60.571 45.833 0.00 0.00 0.00 3.68
2875 3031 4.519906 TTAGGGATTTAGGAGGGCAAAG 57.480 45.455 0.00 0.00 0.00 2.77
2876 3032 2.288525 AGGGATTTAGGAGGGCAAAGT 58.711 47.619 0.00 0.00 0.00 2.66
2877 3033 3.470868 AGGGATTTAGGAGGGCAAAGTA 58.529 45.455 0.00 0.00 0.00 2.24
2878 3034 3.459969 AGGGATTTAGGAGGGCAAAGTAG 59.540 47.826 0.00 0.00 0.00 2.57
2879 3035 3.458487 GGGATTTAGGAGGGCAAAGTAGA 59.542 47.826 0.00 0.00 0.00 2.59
2880 3036 4.104897 GGGATTTAGGAGGGCAAAGTAGAT 59.895 45.833 0.00 0.00 0.00 1.98
2881 3037 5.066593 GGATTTAGGAGGGCAAAGTAGATG 58.933 45.833 0.00 0.00 0.00 2.90
2882 3038 3.560636 TTAGGAGGGCAAAGTAGATGC 57.439 47.619 0.00 0.00 43.08 3.91
2883 3039 1.289160 AGGAGGGCAAAGTAGATGCA 58.711 50.000 0.00 0.00 45.60 3.96
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
5 6 0.968405 GGCCAAGCCTTTTCACATGA 59.032 50.000 0.00 0.00 46.69 3.07
42 43 1.373371 GTTCGGTTCGGGTTACGCT 60.373 57.895 0.00 0.00 43.86 5.07
52 53 0.606604 TGGTCTGGCTAGTTCGGTTC 59.393 55.000 0.00 0.00 0.00 3.62
55 56 0.608640 AAGTGGTCTGGCTAGTTCGG 59.391 55.000 0.00 0.00 0.00 4.30
56 57 1.272490 TCAAGTGGTCTGGCTAGTTCG 59.728 52.381 0.00 0.00 0.00 3.95
57 58 2.933056 GCTCAAGTGGTCTGGCTAGTTC 60.933 54.545 0.00 0.00 0.00 3.01
58 59 1.002544 GCTCAAGTGGTCTGGCTAGTT 59.997 52.381 0.00 0.00 0.00 2.24
65 66 3.054802 AGGGATTTAGCTCAAGTGGTCTG 60.055 47.826 0.00 0.00 0.00 3.51
69 70 2.939103 CGAAGGGATTTAGCTCAAGTGG 59.061 50.000 0.00 0.00 0.00 4.00
86 87 0.391130 TGGCAAAGGATCCGACGAAG 60.391 55.000 5.98 0.00 0.00 3.79
88 89 1.218047 CTGGCAAAGGATCCGACGA 59.782 57.895 5.98 0.00 0.00 4.20
91 92 2.368439 CAAATCTGGCAAAGGATCCGA 58.632 47.619 5.98 0.00 0.00 4.55
104 105 4.666655 CGGACGAGTAAGTTTGCAAATCTG 60.667 45.833 16.21 7.33 0.00 2.90
151 152 2.270434 TAGCTTGGATCTTCCCCAGT 57.730 50.000 0.00 0.00 35.03 4.00
152 153 5.104735 GGTATATAGCTTGGATCTTCCCCAG 60.105 48.000 4.65 0.00 35.03 4.45
156 157 4.164413 GGGGGTATATAGCTTGGATCTTCC 59.836 50.000 11.53 1.51 36.96 3.46
159 160 4.104831 GTGGGGGTATATAGCTTGGATCT 58.895 47.826 11.53 0.00 0.00 2.75
200 201 6.896860 TGAACATGATTGGGATTAATGGACTT 59.103 34.615 0.00 0.00 0.00 3.01
221 222 3.081061 TGCTGTGACATATGGGTTGAAC 58.919 45.455 7.80 0.00 0.00 3.18
240 241 2.537600 AGGGGTCATCCTCTCATGC 58.462 57.895 0.00 0.00 41.44 4.06
254 255 4.514577 CGTGCGGTGCTAGAGGGG 62.515 72.222 0.00 0.00 0.00 4.79
273 274 0.608035 GGGTTTCCATCACTTCCGCA 60.608 55.000 0.00 0.00 0.00 5.69
274 275 0.322546 AGGGTTTCCATCACTTCCGC 60.323 55.000 0.00 0.00 34.83 5.54
292 293 1.168714 GGCAACTGCTTGGGAACTAG 58.831 55.000 1.06 0.00 41.70 2.57
314 315 2.271173 CGGTGGGGCTTAGGGTTC 59.729 66.667 0.00 0.00 0.00 3.62
337 338 5.397360 AGGAGACAACCAAATGGATTCTTT 58.603 37.500 6.42 0.00 38.94 2.52
445 482 3.643763 CGTCAGTAAGCTCTGAAGTTGT 58.356 45.455 6.69 0.00 44.48 3.32
449 486 1.634702 GGCGTCAGTAAGCTCTGAAG 58.365 55.000 12.18 12.18 44.48 3.02
450 487 0.246635 GGGCGTCAGTAAGCTCTGAA 59.753 55.000 6.69 0.00 44.48 3.02
453 490 0.685097 TTTGGGCGTCAGTAAGCTCT 59.315 50.000 0.00 0.00 34.36 4.09
458 495 1.600023 CTGGTTTTGGGCGTCAGTAA 58.400 50.000 0.00 0.00 0.00 2.24
462 499 3.283684 CGCTGGTTTTGGGCGTCA 61.284 61.111 0.00 0.00 43.28 4.35
549 586 1.278985 TCTGCCCTTGTGATTCGACAT 59.721 47.619 0.00 0.00 0.00 3.06
553 590 1.081892 CACTCTGCCCTTGTGATTCG 58.918 55.000 0.00 0.00 33.95 3.34
559 596 1.656587 TCCATACACTCTGCCCTTGT 58.343 50.000 0.00 0.00 0.00 3.16
561 598 3.181434 TGTTTTCCATACACTCTGCCCTT 60.181 43.478 0.00 0.00 0.00 3.95
584 621 2.432146 TCAAGAGTGATGGCTAGCGAAT 59.568 45.455 9.00 4.83 0.00 3.34
585 622 1.824852 TCAAGAGTGATGGCTAGCGAA 59.175 47.619 9.00 0.00 0.00 4.70
586 623 1.474330 TCAAGAGTGATGGCTAGCGA 58.526 50.000 9.00 4.95 0.00 4.93
587 624 2.522836 ATCAAGAGTGATGGCTAGCG 57.477 50.000 9.00 0.00 43.13 4.26
588 625 4.222588 AGGATATCAAGAGTGATGGCTAGC 59.777 45.833 6.04 6.04 44.49 3.42
589 626 5.105392 GGAGGATATCAAGAGTGATGGCTAG 60.105 48.000 4.83 0.00 44.49 3.42
590 627 4.774726 GGAGGATATCAAGAGTGATGGCTA 59.225 45.833 4.83 0.00 44.49 3.93
591 628 3.582208 GGAGGATATCAAGAGTGATGGCT 59.418 47.826 4.83 0.00 44.49 4.75
592 629 3.582208 AGGAGGATATCAAGAGTGATGGC 59.418 47.826 4.83 0.00 44.49 4.40
593 630 6.070881 CCTTAGGAGGATATCAAGAGTGATGG 60.071 46.154 4.83 0.00 46.74 3.51
594 631 6.934056 CCTTAGGAGGATATCAAGAGTGATG 58.066 44.000 4.83 0.00 46.74 3.07
608 645 3.147772 GCACAGAGTGTCCTTAGGAGGA 61.148 54.545 0.00 0.00 40.78 3.71
609 646 1.205893 GCACAGAGTGTCCTTAGGAGG 59.794 57.143 0.00 0.00 37.97 4.30
610 647 1.205893 GGCACAGAGTGTCCTTAGGAG 59.794 57.143 0.00 0.00 35.75 3.69
611 648 1.203187 AGGCACAGAGTGTCCTTAGGA 60.203 52.381 0.00 0.00 39.18 2.94
612 649 1.205893 GAGGCACAGAGTGTCCTTAGG 59.794 57.143 12.19 0.00 39.18 2.69
613 650 1.205893 GGAGGCACAGAGTGTCCTTAG 59.794 57.143 12.19 0.00 39.18 2.18
614 651 1.267121 GGAGGCACAGAGTGTCCTTA 58.733 55.000 12.19 0.00 39.18 2.69
615 652 0.764369 TGGAGGCACAGAGTGTCCTT 60.764 55.000 12.19 0.00 39.18 3.36
616 653 0.764369 TTGGAGGCACAGAGTGTCCT 60.764 55.000 11.19 11.19 39.18 3.85
617 654 0.603975 GTTGGAGGCACAGAGTGTCC 60.604 60.000 0.00 0.00 39.18 4.02
618 655 0.394565 AGTTGGAGGCACAGAGTGTC 59.605 55.000 0.00 0.00 38.58 3.67
623 660 1.768275 TCTCAAAGTTGGAGGCACAGA 59.232 47.619 7.44 0.00 33.18 3.41
626 663 1.528129 CCTCTCAAAGTTGGAGGCAC 58.472 55.000 7.44 0.00 38.16 5.01
629 666 1.981495 ACTCCCTCTCAAAGTTGGAGG 59.019 52.381 7.44 15.97 45.53 4.30
636 673 4.252073 CATCAGTCAACTCCCTCTCAAAG 58.748 47.826 0.00 0.00 0.00 2.77
677 719 2.260844 ATATCTTGGTCATGCACCCG 57.739 50.000 10.60 4.13 46.18 5.28
697 739 6.607970 TCTTTCAGAATTGATGGATATGGCT 58.392 36.000 0.00 0.00 32.27 4.75
720 772 3.323115 TGCTCCACAGATATCATGGACTC 59.677 47.826 19.73 15.52 37.60 3.36
721 773 3.311990 TGCTCCACAGATATCATGGACT 58.688 45.455 19.73 0.00 37.60 3.85
722 774 3.758755 TGCTCCACAGATATCATGGAC 57.241 47.619 19.73 16.86 37.60 4.02
723 775 4.263199 GGATTGCTCCACAGATATCATGGA 60.263 45.833 21.40 21.40 41.64 3.41
724 776 4.008330 GGATTGCTCCACAGATATCATGG 58.992 47.826 16.44 16.44 41.64 3.66
725 777 3.683340 CGGATTGCTCCACAGATATCATG 59.317 47.826 5.32 2.83 42.19 3.07
727 779 2.965147 TCGGATTGCTCCACAGATATCA 59.035 45.455 5.32 0.00 42.19 2.15
728 780 3.583806 CTCGGATTGCTCCACAGATATC 58.416 50.000 0.00 0.00 42.19 1.63
732 784 1.219124 GCTCGGATTGCTCCACAGA 59.781 57.895 0.00 0.00 42.19 3.41
733 785 1.088340 CAGCTCGGATTGCTCCACAG 61.088 60.000 0.00 0.00 42.19 3.66
734 786 1.078918 CAGCTCGGATTGCTCCACA 60.079 57.895 0.00 0.00 42.19 4.17
735 787 1.078848 ACAGCTCGGATTGCTCCAC 60.079 57.895 0.00 0.00 42.19 4.02
736 788 1.219124 GACAGCTCGGATTGCTCCA 59.781 57.895 0.00 0.00 42.19 3.86
737 789 1.880340 CGACAGCTCGGATTGCTCC 60.880 63.158 0.00 0.00 38.92 4.70
738 790 0.458543 TTCGACAGCTCGGATTGCTC 60.459 55.000 0.00 0.00 40.58 4.26
739 791 0.176680 ATTCGACAGCTCGGATTGCT 59.823 50.000 0.00 0.00 34.08 3.91
740 792 1.004504 GAATTCGACAGCTCGGATTGC 60.005 52.381 6.61 0.00 46.37 3.56
741 793 2.270923 TGAATTCGACAGCTCGGATTG 58.729 47.619 6.61 0.00 46.37 2.67
743 795 2.159043 ACATGAATTCGACAGCTCGGAT 60.159 45.455 0.00 0.00 40.09 4.18
744 796 1.204704 ACATGAATTCGACAGCTCGGA 59.795 47.619 0.00 0.00 40.58 4.55
745 797 1.325640 CACATGAATTCGACAGCTCGG 59.674 52.381 0.00 0.00 40.58 4.63
746 798 2.262211 TCACATGAATTCGACAGCTCG 58.738 47.619 0.00 0.00 41.65 5.03
747 799 2.030213 GCTCACATGAATTCGACAGCTC 59.970 50.000 0.00 0.00 0.00 4.09
748 800 2.005451 GCTCACATGAATTCGACAGCT 58.995 47.619 0.00 0.00 0.00 4.24
749 801 1.733912 TGCTCACATGAATTCGACAGC 59.266 47.619 0.00 4.62 0.00 4.40
750 802 4.611310 ATTGCTCACATGAATTCGACAG 57.389 40.909 0.00 0.00 0.00 3.51
751 803 6.682423 ATTATTGCTCACATGAATTCGACA 57.318 33.333 0.00 0.00 0.00 4.35
752 804 6.787515 CGTATTATTGCTCACATGAATTCGAC 59.212 38.462 0.00 0.00 29.87 4.20
753 805 6.563939 GCGTATTATTGCTCACATGAATTCGA 60.564 38.462 0.00 0.00 29.87 3.71
754 806 5.561499 GCGTATTATTGCTCACATGAATTCG 59.439 40.000 0.00 0.00 30.75 3.34
755 807 5.561499 CGCGTATTATTGCTCACATGAATTC 59.439 40.000 0.00 0.00 0.00 2.17
756 808 5.443261 CGCGTATTATTGCTCACATGAATT 58.557 37.500 0.00 0.00 0.00 2.17
757 809 4.611355 GCGCGTATTATTGCTCACATGAAT 60.611 41.667 8.43 0.00 0.00 2.57
758 810 3.303066 GCGCGTATTATTGCTCACATGAA 60.303 43.478 8.43 0.00 0.00 2.57
778 830 2.889988 TTGGGATCGATGTGCGCG 60.890 61.111 0.54 0.00 40.61 6.86
804 856 1.260825 GCTCCTATTTTTACGCCGAGC 59.739 52.381 0.00 0.00 35.03 5.03
1113 1206 2.099831 GAGCCGTCGTCGTAGGTG 59.900 66.667 0.71 0.00 35.01 4.00
1284 1386 1.201647 GAGTCGACGATGGAGTTGGAA 59.798 52.381 10.46 0.00 0.00 3.53
1620 1751 4.687215 TCTGCTGTCGCTGGTGGC 62.687 66.667 0.00 0.00 35.96 5.01
1621 1752 2.740055 GTCTGCTGTCGCTGGTGG 60.740 66.667 0.00 0.00 35.96 4.61
1622 1753 2.025969 CTGTCTGCTGTCGCTGGTG 61.026 63.158 0.00 0.00 35.96 4.17
1623 1754 2.152297 CTCTGTCTGCTGTCGCTGGT 62.152 60.000 0.00 0.00 35.96 4.00
1624 1755 1.445754 CTCTGTCTGCTGTCGCTGG 60.446 63.158 0.00 0.00 35.96 4.85
1625 1756 2.093473 GCTCTGTCTGCTGTCGCTG 61.093 63.158 0.00 0.00 36.97 5.18
1626 1757 2.261052 GCTCTGTCTGCTGTCGCT 59.739 61.111 0.00 0.00 36.97 4.93
1660 1791 3.272925 TGGTGCGGCCATTTGATTA 57.727 47.368 2.24 0.00 43.61 1.75
1669 1800 0.179045 ATCTATCTGTTGGTGCGGCC 60.179 55.000 0.00 0.00 37.90 6.13
1670 1801 0.940126 CATCTATCTGTTGGTGCGGC 59.060 55.000 0.00 0.00 0.00 6.53
1671 1802 1.586422 CCATCTATCTGTTGGTGCGG 58.414 55.000 0.00 0.00 32.30 5.69
1674 1805 1.811558 CGGCCCATCTATCTGTTGGTG 60.812 57.143 0.00 0.00 34.51 4.17
1677 1808 0.250467 CCCGGCCCATCTATCTGTTG 60.250 60.000 0.00 0.00 0.00 3.33
1678 1809 2.056906 GCCCGGCCCATCTATCTGTT 62.057 60.000 0.00 0.00 0.00 3.16
1724 1855 0.254462 TCCCGTTTCATGCATGCCTA 59.746 50.000 22.25 6.84 0.00 3.93
1725 1856 1.001020 TCCCGTTTCATGCATGCCT 60.001 52.632 22.25 1.31 0.00 4.75
1758 1897 5.295540 CCTTTCTAATCCTTGCAGCTTCTAC 59.704 44.000 0.00 0.00 0.00 2.59
1766 1907 3.806949 ACCACCTTTCTAATCCTTGCA 57.193 42.857 0.00 0.00 0.00 4.08
1799 1940 3.119136 GCTGTTACACTTAACGACGACTG 59.881 47.826 0.00 0.00 40.61 3.51
1891 2032 4.055360 GTCTGTGCATGTACTGTGTTACA 58.945 43.478 15.25 3.41 0.00 2.41
1892 2033 3.121279 CGTCTGTGCATGTACTGTGTTAC 59.879 47.826 15.25 7.68 0.00 2.50
1920 2061 3.936453 TGCGTTGATAGGGTTGAATGTAC 59.064 43.478 0.00 0.00 0.00 2.90
1944 2095 2.025544 TAACGAAAATGCGTGTGTGC 57.974 45.000 0.00 0.00 44.86 4.57
1952 2103 6.984740 TTTCAACACTCATAACGAAAATGC 57.015 33.333 0.00 0.00 0.00 3.56
1995 2146 7.778470 ACTCATCTAAAAATCCGAACTGATC 57.222 36.000 0.00 0.00 0.00 2.92
2004 2155 6.017523 GCTCTAGCCAACTCATCTAAAAATCC 60.018 42.308 0.00 0.00 34.31 3.01
2007 2158 5.804639 TGCTCTAGCCAACTCATCTAAAAA 58.195 37.500 0.00 0.00 41.18 1.94
2067 2221 1.743252 CCGCCTTGGCAGAGTCTTC 60.743 63.158 12.45 0.00 0.00 2.87
2081 2237 6.143278 CCGCAAAATCTTATTTTAATACCGCC 59.857 38.462 0.00 0.00 0.00 6.13
2101 2257 2.422597 CCACAACTATGAAGACCGCAA 58.577 47.619 0.00 0.00 0.00 4.85
2107 2263 2.237143 CCTCTGGCCACAACTATGAAGA 59.763 50.000 0.00 0.00 0.00 2.87
2108 2264 2.636830 CCTCTGGCCACAACTATGAAG 58.363 52.381 0.00 0.00 0.00 3.02
2109 2265 1.340017 GCCTCTGGCCACAACTATGAA 60.340 52.381 0.00 0.00 44.06 2.57
2110 2266 0.253044 GCCTCTGGCCACAACTATGA 59.747 55.000 0.00 0.00 44.06 2.15
2111 2267 2.785868 GCCTCTGGCCACAACTATG 58.214 57.895 0.00 0.00 44.06 2.23
2121 2277 1.890979 CATCACCATCGCCTCTGGC 60.891 63.158 0.00 0.00 46.75 4.85
2122 2278 1.825341 TCATCACCATCGCCTCTGG 59.175 57.895 0.00 0.00 39.80 3.86
2486 2642 4.960469 TCTTGGATTATAGGTCACCGAACT 59.040 41.667 0.00 0.00 32.68 3.01
2487 2643 5.272283 TCTTGGATTATAGGTCACCGAAC 57.728 43.478 0.00 0.00 0.00 3.95
2488 2644 5.600898 TCATCTTGGATTATAGGTCACCGAA 59.399 40.000 0.00 0.00 0.00 4.30
2489 2645 5.144832 TCATCTTGGATTATAGGTCACCGA 58.855 41.667 0.00 0.00 0.00 4.69
2490 2646 5.243954 TCTCATCTTGGATTATAGGTCACCG 59.756 44.000 0.00 0.00 0.00 4.94
2491 2647 6.672266 TCTCATCTTGGATTATAGGTCACC 57.328 41.667 0.00 0.00 0.00 4.02
2492 2648 7.102346 CCATCTCATCTTGGATTATAGGTCAC 58.898 42.308 0.00 0.00 34.81 3.67
2493 2649 6.296087 GCCATCTCATCTTGGATTATAGGTCA 60.296 42.308 0.00 0.00 34.81 4.02
2494 2650 6.112058 GCCATCTCATCTTGGATTATAGGTC 58.888 44.000 0.00 0.00 34.81 3.85
2495 2651 5.549228 TGCCATCTCATCTTGGATTATAGGT 59.451 40.000 0.00 0.00 34.81 3.08
2496 2652 6.058553 TGCCATCTCATCTTGGATTATAGG 57.941 41.667 0.00 0.00 34.81 2.57
2497 2653 6.114089 CCTGCCATCTCATCTTGGATTATAG 58.886 44.000 0.00 0.00 34.81 1.31
2498 2654 5.045359 CCCTGCCATCTCATCTTGGATTATA 60.045 44.000 0.00 0.00 34.81 0.98
2499 2655 4.263816 CCCTGCCATCTCATCTTGGATTAT 60.264 45.833 0.00 0.00 34.81 1.28
2500 2656 3.073503 CCCTGCCATCTCATCTTGGATTA 59.926 47.826 0.00 0.00 34.81 1.75
2501 2657 2.158505 CCCTGCCATCTCATCTTGGATT 60.159 50.000 0.00 0.00 34.81 3.01
2502 2658 1.424302 CCCTGCCATCTCATCTTGGAT 59.576 52.381 0.00 0.00 34.81 3.41
2503 2659 0.841961 CCCTGCCATCTCATCTTGGA 59.158 55.000 0.00 0.00 34.81 3.53
2504 2660 0.178998 CCCCTGCCATCTCATCTTGG 60.179 60.000 0.00 0.00 36.03 3.61
2505 2661 0.822532 GCCCCTGCCATCTCATCTTG 60.823 60.000 0.00 0.00 0.00 3.02
2506 2662 1.535685 GCCCCTGCCATCTCATCTT 59.464 57.895 0.00 0.00 0.00 2.40
2507 2663 3.248764 GCCCCTGCCATCTCATCT 58.751 61.111 0.00 0.00 0.00 2.90
2517 2673 0.179006 CCTTAGAAGATGGCCCCTGC 60.179 60.000 0.00 0.00 0.00 4.85
2518 2674 0.179006 GCCTTAGAAGATGGCCCCTG 60.179 60.000 0.00 0.00 41.58 4.45
2519 2675 1.700042 CGCCTTAGAAGATGGCCCCT 61.700 60.000 0.00 0.00 43.98 4.79
2520 2676 1.227973 CGCCTTAGAAGATGGCCCC 60.228 63.158 0.00 0.00 43.98 5.80
2521 2677 1.227973 CCGCCTTAGAAGATGGCCC 60.228 63.158 0.00 0.00 43.98 5.80
2522 2678 0.250081 CTCCGCCTTAGAAGATGGCC 60.250 60.000 0.00 0.00 43.98 5.36
2523 2679 0.753262 TCTCCGCCTTAGAAGATGGC 59.247 55.000 0.00 0.00 43.52 4.40
2524 2680 2.289320 CCATCTCCGCCTTAGAAGATGG 60.289 54.545 14.01 14.01 44.23 3.51
2525 2681 2.630098 TCCATCTCCGCCTTAGAAGATG 59.370 50.000 4.59 4.59 34.61 2.90
2526 2682 2.964209 TCCATCTCCGCCTTAGAAGAT 58.036 47.619 0.00 0.00 0.00 2.40
2527 2683 2.454336 TCCATCTCCGCCTTAGAAGA 57.546 50.000 0.00 0.00 0.00 2.87
2528 2684 2.366916 ACATCCATCTCCGCCTTAGAAG 59.633 50.000 0.00 0.00 0.00 2.85
2529 2685 2.365617 GACATCCATCTCCGCCTTAGAA 59.634 50.000 0.00 0.00 0.00 2.10
2530 2686 1.964223 GACATCCATCTCCGCCTTAGA 59.036 52.381 0.00 0.00 0.00 2.10
2531 2687 1.001406 GGACATCCATCTCCGCCTTAG 59.999 57.143 0.00 0.00 35.64 2.18
2532 2688 1.048601 GGACATCCATCTCCGCCTTA 58.951 55.000 0.00 0.00 35.64 2.69
2533 2689 0.982852 TGGACATCCATCTCCGCCTT 60.983 55.000 0.00 0.00 42.01 4.35
2534 2690 0.982852 TTGGACATCCATCTCCGCCT 60.983 55.000 0.34 0.00 46.97 5.52
2535 2691 0.107214 TTTGGACATCCATCTCCGCC 60.107 55.000 0.34 0.00 46.97 6.13
2536 2692 1.017387 GTTTGGACATCCATCTCCGC 58.983 55.000 0.34 0.00 46.97 5.54
2537 2693 2.283298 CAGTTTGGACATCCATCTCCG 58.717 52.381 0.34 0.00 46.97 4.63
2538 2694 3.356529 ACAGTTTGGACATCCATCTCC 57.643 47.619 0.34 0.00 46.97 3.71
2539 2695 5.582665 GTCTAACAGTTTGGACATCCATCTC 59.417 44.000 0.34 0.00 46.97 2.75
2540 2696 5.013079 TGTCTAACAGTTTGGACATCCATCT 59.987 40.000 14.15 1.18 45.43 2.90
2541 2697 5.245531 TGTCTAACAGTTTGGACATCCATC 58.754 41.667 14.15 0.00 45.43 3.51
2542 2698 5.241403 TGTCTAACAGTTTGGACATCCAT 57.759 39.130 14.15 0.00 45.43 3.41
2543 2699 4.698201 TGTCTAACAGTTTGGACATCCA 57.302 40.909 14.15 0.00 45.43 3.41
2548 2704 6.148976 GGGATTACTTGTCTAACAGTTTGGAC 59.851 42.308 10.44 10.44 42.21 4.02
2549 2705 6.235664 GGGATTACTTGTCTAACAGTTTGGA 58.764 40.000 0.00 0.00 0.00 3.53
2550 2706 5.121768 CGGGATTACTTGTCTAACAGTTTGG 59.878 44.000 0.00 0.00 0.00 3.28
2551 2707 5.699458 ACGGGATTACTTGTCTAACAGTTTG 59.301 40.000 0.00 0.00 0.00 2.93
2552 2708 5.861727 ACGGGATTACTTGTCTAACAGTTT 58.138 37.500 0.00 0.00 0.00 2.66
2553 2709 5.479124 ACGGGATTACTTGTCTAACAGTT 57.521 39.130 0.00 0.00 0.00 3.16
2554 2710 5.126707 CCTACGGGATTACTTGTCTAACAGT 59.873 44.000 0.00 0.00 33.58 3.55
2555 2711 5.359009 TCCTACGGGATTACTTGTCTAACAG 59.641 44.000 0.00 0.00 36.57 3.16
2556 2712 5.263599 TCCTACGGGATTACTTGTCTAACA 58.736 41.667 0.00 0.00 36.57 2.41
2557 2713 5.841957 TCCTACGGGATTACTTGTCTAAC 57.158 43.478 0.00 0.00 36.57 2.34
2570 2726 5.378230 TCTGTTAAGTAGATCCTACGGGA 57.622 43.478 0.00 0.00 46.81 5.14
2571 2727 5.106634 CGATCTGTTAAGTAGATCCTACGGG 60.107 48.000 17.63 5.46 44.87 5.28
2572 2728 5.469421 ACGATCTGTTAAGTAGATCCTACGG 59.531 44.000 17.63 9.94 44.87 4.02
2573 2729 6.542574 ACGATCTGTTAAGTAGATCCTACG 57.457 41.667 17.63 12.12 44.87 3.51
2574 2730 8.016801 GCTTACGATCTGTTAAGTAGATCCTAC 58.983 40.741 17.63 0.00 44.87 3.18
2575 2731 7.174599 GGCTTACGATCTGTTAAGTAGATCCTA 59.825 40.741 17.63 11.28 44.87 2.94
2576 2732 6.016108 GGCTTACGATCTGTTAAGTAGATCCT 60.016 42.308 17.63 11.96 44.87 3.24
2577 2733 6.016108 AGGCTTACGATCTGTTAAGTAGATCC 60.016 42.308 17.63 8.39 44.87 3.36
2578 2734 6.972722 AGGCTTACGATCTGTTAAGTAGATC 58.027 40.000 15.13 15.13 44.46 2.75
2579 2735 6.963083 AGGCTTACGATCTGTTAAGTAGAT 57.037 37.500 0.00 2.60 37.59 1.98
2580 2736 7.052873 ACTAGGCTTACGATCTGTTAAGTAGA 58.947 38.462 0.00 0.00 0.00 2.59
2581 2737 7.012138 TGACTAGGCTTACGATCTGTTAAGTAG 59.988 40.741 0.00 0.00 0.00 2.57
2582 2738 6.825213 TGACTAGGCTTACGATCTGTTAAGTA 59.175 38.462 0.00 0.00 0.00 2.24
2583 2739 5.651139 TGACTAGGCTTACGATCTGTTAAGT 59.349 40.000 0.00 0.00 0.00 2.24
2584 2740 6.132791 TGACTAGGCTTACGATCTGTTAAG 57.867 41.667 0.00 0.00 0.00 1.85
2585 2741 6.710597 ATGACTAGGCTTACGATCTGTTAA 57.289 37.500 0.00 0.00 0.00 2.01
2586 2742 6.710597 AATGACTAGGCTTACGATCTGTTA 57.289 37.500 0.00 0.00 0.00 2.41
2587 2743 5.599999 AATGACTAGGCTTACGATCTGTT 57.400 39.130 0.00 0.00 0.00 3.16
2588 2744 6.062749 TCTAATGACTAGGCTTACGATCTGT 58.937 40.000 0.00 0.00 0.00 3.41
2589 2745 6.561737 TCTAATGACTAGGCTTACGATCTG 57.438 41.667 0.00 0.00 0.00 2.90
2590 2746 6.943146 TGATCTAATGACTAGGCTTACGATCT 59.057 38.462 16.94 0.00 0.00 2.75
2591 2747 7.024768 GTGATCTAATGACTAGGCTTACGATC 58.975 42.308 0.00 6.56 0.00 3.69
2592 2748 6.071840 GGTGATCTAATGACTAGGCTTACGAT 60.072 42.308 0.00 0.00 0.00 3.73
2593 2749 5.241064 GGTGATCTAATGACTAGGCTTACGA 59.759 44.000 0.00 0.00 0.00 3.43
2594 2750 5.241949 AGGTGATCTAATGACTAGGCTTACG 59.758 44.000 0.00 0.00 0.00 3.18
2595 2751 6.658188 AGGTGATCTAATGACTAGGCTTAC 57.342 41.667 0.00 0.00 0.00 2.34
2596 2752 8.958060 AATAGGTGATCTAATGACTAGGCTTA 57.042 34.615 0.00 0.00 0.00 3.09
2597 2753 7.863901 AATAGGTGATCTAATGACTAGGCTT 57.136 36.000 0.00 0.00 0.00 4.35
2598 2754 7.675062 CAAATAGGTGATCTAATGACTAGGCT 58.325 38.462 0.00 0.00 0.00 4.58
2599 2755 6.370166 GCAAATAGGTGATCTAATGACTAGGC 59.630 42.308 0.00 0.00 0.00 3.93
2600 2756 7.445121 TGCAAATAGGTGATCTAATGACTAGG 58.555 38.462 0.00 0.00 0.00 3.02
2608 2764 9.625747 TGTTCATTATGCAAATAGGTGATCTAA 57.374 29.630 0.00 0.00 0.00 2.10
2609 2765 9.276590 CTGTTCATTATGCAAATAGGTGATCTA 57.723 33.333 0.00 0.00 0.00 1.98
2610 2766 7.994911 TCTGTTCATTATGCAAATAGGTGATCT 59.005 33.333 0.00 0.00 0.00 2.75
2611 2767 8.158169 TCTGTTCATTATGCAAATAGGTGATC 57.842 34.615 0.00 0.00 0.00 2.92
2612 2768 7.230108 CCTCTGTTCATTATGCAAATAGGTGAT 59.770 37.037 0.00 0.00 0.00 3.06
2613 2769 6.543465 CCTCTGTTCATTATGCAAATAGGTGA 59.457 38.462 0.00 0.00 0.00 4.02
2614 2770 6.238842 CCCTCTGTTCATTATGCAAATAGGTG 60.239 42.308 0.00 0.00 0.00 4.00
2615 2771 5.829924 CCCTCTGTTCATTATGCAAATAGGT 59.170 40.000 0.00 0.00 0.00 3.08
2616 2772 6.064060 TCCCTCTGTTCATTATGCAAATAGG 58.936 40.000 0.00 0.00 0.00 2.57
2617 2773 7.309012 CCATCCCTCTGTTCATTATGCAAATAG 60.309 40.741 0.00 0.00 0.00 1.73
2618 2774 6.491062 CCATCCCTCTGTTCATTATGCAAATA 59.509 38.462 0.00 0.00 0.00 1.40
2619 2775 5.303589 CCATCCCTCTGTTCATTATGCAAAT 59.696 40.000 0.00 0.00 0.00 2.32
2620 2776 4.646040 CCATCCCTCTGTTCATTATGCAAA 59.354 41.667 0.00 0.00 0.00 3.68
2621 2777 4.079844 TCCATCCCTCTGTTCATTATGCAA 60.080 41.667 0.00 0.00 0.00 4.08
2622 2778 3.459227 TCCATCCCTCTGTTCATTATGCA 59.541 43.478 0.00 0.00 0.00 3.96
2623 2779 4.090761 TCCATCCCTCTGTTCATTATGC 57.909 45.455 0.00 0.00 0.00 3.14
2624 2780 6.301486 TCAATCCATCCCTCTGTTCATTATG 58.699 40.000 0.00 0.00 0.00 1.90
2625 2781 6.520021 TCAATCCATCCCTCTGTTCATTAT 57.480 37.500 0.00 0.00 0.00 1.28
2626 2782 5.974156 TCAATCCATCCCTCTGTTCATTA 57.026 39.130 0.00 0.00 0.00 1.90
2627 2783 4.868172 TCAATCCATCCCTCTGTTCATT 57.132 40.909 0.00 0.00 0.00 2.57
2628 2784 4.414514 TCATCAATCCATCCCTCTGTTCAT 59.585 41.667 0.00 0.00 0.00 2.57
2629 2785 3.781965 TCATCAATCCATCCCTCTGTTCA 59.218 43.478 0.00 0.00 0.00 3.18
2630 2786 4.428294 TCATCAATCCATCCCTCTGTTC 57.572 45.455 0.00 0.00 0.00 3.18
2631 2787 4.664064 AGATCATCAATCCATCCCTCTGTT 59.336 41.667 0.00 0.00 34.67 3.16
2632 2788 4.241151 AGATCATCAATCCATCCCTCTGT 58.759 43.478 0.00 0.00 34.67 3.41
2633 2789 4.912317 AGATCATCAATCCATCCCTCTG 57.088 45.455 0.00 0.00 34.67 3.35
2634 2790 5.250313 GGTAAGATCATCAATCCATCCCTCT 59.750 44.000 0.00 0.00 34.67 3.69
2635 2791 5.013495 TGGTAAGATCATCAATCCATCCCTC 59.987 44.000 0.00 0.00 34.67 4.30
2636 2792 4.915809 TGGTAAGATCATCAATCCATCCCT 59.084 41.667 0.00 0.00 34.67 4.20
2637 2793 5.006386 GTGGTAAGATCATCAATCCATCCC 58.994 45.833 0.00 0.00 34.67 3.85
2638 2794 5.006386 GGTGGTAAGATCATCAATCCATCC 58.994 45.833 0.00 0.00 34.67 3.51
2639 2795 5.624159 TGGTGGTAAGATCATCAATCCATC 58.376 41.667 0.00 0.00 34.67 3.51
2640 2796 5.651612 TGGTGGTAAGATCATCAATCCAT 57.348 39.130 0.00 0.00 34.67 3.41
2641 2797 5.449297 TTGGTGGTAAGATCATCAATCCA 57.551 39.130 0.00 0.00 34.67 3.41
2642 2798 5.242393 CCATTGGTGGTAAGATCATCAATCC 59.758 44.000 0.00 0.00 42.15 3.01
2643 2799 6.064060 TCCATTGGTGGTAAGATCATCAATC 58.936 40.000 1.86 0.00 42.15 2.67
2644 2800 6.017211 TCCATTGGTGGTAAGATCATCAAT 57.983 37.500 1.86 0.00 44.10 2.57
2645 2801 5.449297 TCCATTGGTGGTAAGATCATCAA 57.551 39.130 1.86 0.00 46.16 2.57
2646 2802 5.191522 TCTTCCATTGGTGGTAAGATCATCA 59.808 40.000 1.86 0.00 46.16 3.07
2647 2803 5.684704 TCTTCCATTGGTGGTAAGATCATC 58.315 41.667 1.86 0.00 46.16 2.92
2648 2804 5.398353 CCTCTTCCATTGGTGGTAAGATCAT 60.398 44.000 1.86 0.00 46.16 2.45
2649 2805 4.080356 CCTCTTCCATTGGTGGTAAGATCA 60.080 45.833 1.86 0.00 46.16 2.92
2650 2806 4.455606 CCTCTTCCATTGGTGGTAAGATC 58.544 47.826 1.86 0.00 46.16 2.75
2651 2807 3.372025 GCCTCTTCCATTGGTGGTAAGAT 60.372 47.826 1.86 0.00 46.16 2.40
2652 2808 2.026262 GCCTCTTCCATTGGTGGTAAGA 60.026 50.000 1.86 3.70 46.16 2.10
2653 2809 2.369394 GCCTCTTCCATTGGTGGTAAG 58.631 52.381 1.86 0.00 46.16 2.34
2654 2810 1.005450 GGCCTCTTCCATTGGTGGTAA 59.995 52.381 1.86 0.00 46.16 2.85
2655 2811 0.623723 GGCCTCTTCCATTGGTGGTA 59.376 55.000 1.86 0.00 46.16 3.25
2656 2812 1.384191 GGCCTCTTCCATTGGTGGT 59.616 57.895 1.86 0.00 46.16 4.16
2657 2813 0.032813 ATGGCCTCTTCCATTGGTGG 60.033 55.000 3.32 2.96 44.04 4.61
2658 2814 3.602104 ATGGCCTCTTCCATTGGTG 57.398 52.632 3.32 0.00 44.04 4.17
2664 2820 1.281867 CTACACCAATGGCCTCTTCCA 59.718 52.381 3.32 0.00 40.97 3.53
2665 2821 1.408822 CCTACACCAATGGCCTCTTCC 60.409 57.143 3.32 0.00 0.00 3.46
2666 2822 2.019156 GCCTACACCAATGGCCTCTTC 61.019 57.143 3.32 0.00 40.71 2.87
2667 2823 0.034089 GCCTACACCAATGGCCTCTT 60.034 55.000 3.32 0.00 40.71 2.85
2668 2824 1.609783 GCCTACACCAATGGCCTCT 59.390 57.895 3.32 0.00 40.71 3.69
2669 2825 1.819632 CGCCTACACCAATGGCCTC 60.820 63.158 3.32 0.00 43.42 4.70
2670 2826 1.635817 ATCGCCTACACCAATGGCCT 61.636 55.000 3.32 0.00 43.42 5.19
2671 2827 1.152963 ATCGCCTACACCAATGGCC 60.153 57.895 0.00 0.00 43.42 5.36
2672 2828 2.024918 CATCGCCTACACCAATGGC 58.975 57.895 0.00 0.00 42.94 4.40
2673 2829 1.775039 CGCATCGCCTACACCAATGG 61.775 60.000 0.00 0.00 0.00 3.16
2674 2830 0.809636 TCGCATCGCCTACACCAATG 60.810 55.000 0.00 0.00 0.00 2.82
2675 2831 0.107897 TTCGCATCGCCTACACCAAT 60.108 50.000 0.00 0.00 0.00 3.16
2676 2832 0.739462 CTTCGCATCGCCTACACCAA 60.739 55.000 0.00 0.00 0.00 3.67
2677 2833 1.153647 CTTCGCATCGCCTACACCA 60.154 57.895 0.00 0.00 0.00 4.17
2678 2834 1.146358 GACTTCGCATCGCCTACACC 61.146 60.000 0.00 0.00 0.00 4.16
2679 2835 1.146358 GGACTTCGCATCGCCTACAC 61.146 60.000 0.00 0.00 0.00 2.90
2680 2836 1.141019 GGACTTCGCATCGCCTACA 59.859 57.895 0.00 0.00 0.00 2.74
2681 2837 1.591863 GGGACTTCGCATCGCCTAC 60.592 63.158 0.00 0.00 0.00 3.18
2682 2838 2.812499 GGGACTTCGCATCGCCTA 59.188 61.111 0.00 0.00 0.00 3.93
2683 2839 4.514577 CGGGACTTCGCATCGCCT 62.515 66.667 0.00 0.00 0.00 5.52
2684 2840 4.814294 ACGGGACTTCGCATCGCC 62.814 66.667 0.00 0.00 0.00 5.54
2685 2841 3.554692 CACGGGACTTCGCATCGC 61.555 66.667 0.00 0.00 0.00 4.58
2686 2842 3.554692 GCACGGGACTTCGCATCG 61.555 66.667 0.00 0.00 0.00 3.84
2687 2843 3.195698 GGCACGGGACTTCGCATC 61.196 66.667 0.00 0.00 0.00 3.91
2688 2844 3.706373 AGGCACGGGACTTCGCAT 61.706 61.111 0.00 0.00 0.00 4.73
2689 2845 4.680237 CAGGCACGGGACTTCGCA 62.680 66.667 0.00 0.00 0.00 5.10
2691 2847 4.379243 AGCAGGCACGGGACTTCG 62.379 66.667 0.00 0.00 0.00 3.79
2692 2848 2.435059 GAGCAGGCACGGGACTTC 60.435 66.667 0.00 0.00 0.00 3.01
2693 2849 4.379243 CGAGCAGGCACGGGACTT 62.379 66.667 0.00 0.00 0.00 3.01
2695 2851 4.148825 ATCGAGCAGGCACGGGAC 62.149 66.667 10.96 0.00 0.00 4.46
2696 2852 4.147449 CATCGAGCAGGCACGGGA 62.147 66.667 10.96 0.00 0.00 5.14
2706 2862 1.742880 TGTCAAGCCTGCATCGAGC 60.743 57.895 0.00 0.00 45.96 5.03
2707 2863 0.671472 TGTGTCAAGCCTGCATCGAG 60.671 55.000 0.00 0.00 0.00 4.04
2708 2864 0.671472 CTGTGTCAAGCCTGCATCGA 60.671 55.000 0.00 0.00 0.00 3.59
2709 2865 1.642037 CCTGTGTCAAGCCTGCATCG 61.642 60.000 0.00 0.00 0.00 3.84
2710 2866 1.930908 GCCTGTGTCAAGCCTGCATC 61.931 60.000 0.00 0.00 0.00 3.91
2711 2867 1.975407 GCCTGTGTCAAGCCTGCAT 60.975 57.895 0.00 0.00 0.00 3.96
2712 2868 2.595463 GCCTGTGTCAAGCCTGCA 60.595 61.111 0.00 0.00 0.00 4.41
2713 2869 2.282040 AGCCTGTGTCAAGCCTGC 60.282 61.111 0.00 0.00 0.00 4.85
2714 2870 2.031516 CGAGCCTGTGTCAAGCCTG 61.032 63.158 0.00 0.00 0.00 4.85
2715 2871 2.345244 CGAGCCTGTGTCAAGCCT 59.655 61.111 0.00 0.00 0.00 4.58
2716 2872 2.743928 CCGAGCCTGTGTCAAGCC 60.744 66.667 0.00 0.00 0.00 4.35
2717 2873 2.031163 ACCGAGCCTGTGTCAAGC 59.969 61.111 0.00 0.00 0.00 4.01
2718 2874 0.317160 TACACCGAGCCTGTGTCAAG 59.683 55.000 6.76 0.00 43.15 3.02
2719 2875 0.317160 CTACACCGAGCCTGTGTCAA 59.683 55.000 6.76 0.00 43.15 3.18
2720 2876 0.538746 TCTACACCGAGCCTGTGTCA 60.539 55.000 6.76 0.00 43.15 3.58
2721 2877 0.818296 ATCTACACCGAGCCTGTGTC 59.182 55.000 6.76 0.00 43.15 3.67
2723 2879 0.807667 GCATCTACACCGAGCCTGTG 60.808 60.000 0.00 0.00 39.63 3.66
2724 2880 0.972983 AGCATCTACACCGAGCCTGT 60.973 55.000 0.00 0.00 0.00 4.00
2725 2881 0.249238 GAGCATCTACACCGAGCCTG 60.249 60.000 0.00 0.00 0.00 4.85
2726 2882 1.729470 CGAGCATCTACACCGAGCCT 61.729 60.000 0.00 0.00 0.00 4.58
2727 2883 1.299468 CGAGCATCTACACCGAGCC 60.299 63.158 0.00 0.00 0.00 4.70
2728 2884 1.946650 GCGAGCATCTACACCGAGC 60.947 63.158 0.00 0.00 0.00 5.03
2729 2885 0.593518 CAGCGAGCATCTACACCGAG 60.594 60.000 0.00 0.00 0.00 4.63
2730 2886 1.433471 CAGCGAGCATCTACACCGA 59.567 57.895 0.00 0.00 0.00 4.69
2731 2887 2.233654 GCAGCGAGCATCTACACCG 61.234 63.158 0.00 0.00 44.79 4.94
2732 2888 3.711348 GCAGCGAGCATCTACACC 58.289 61.111 0.00 0.00 44.79 4.16
2749 2905 4.208686 GAGGGACGCCGCTACCTG 62.209 72.222 0.00 0.00 35.55 4.00
2786 2942 4.463879 CTCTGCTCCGGTGCCAGG 62.464 72.222 24.73 14.81 0.00 4.45
2787 2943 4.463879 CCTCTGCTCCGGTGCCAG 62.464 72.222 24.73 20.12 0.00 4.85
2788 2944 3.897681 TACCTCTGCTCCGGTGCCA 62.898 63.158 24.73 11.12 34.76 4.92
2789 2945 3.075005 TACCTCTGCTCCGGTGCC 61.075 66.667 24.73 8.35 34.76 5.01
2790 2946 2.496817 CTACCTCTGCTCCGGTGC 59.503 66.667 21.41 21.41 34.76 5.01
2791 2947 1.379977 TCCTACCTCTGCTCCGGTG 60.380 63.158 0.00 0.00 34.76 4.94
2792 2948 1.076632 CTCCTACCTCTGCTCCGGT 60.077 63.158 0.00 0.00 37.31 5.28
2793 2949 1.830408 CCTCCTACCTCTGCTCCGG 60.830 68.421 0.00 0.00 0.00 5.14
2794 2950 0.821711 CTCCTCCTACCTCTGCTCCG 60.822 65.000 0.00 0.00 0.00 4.63
2795 2951 0.469144 CCTCCTCCTACCTCTGCTCC 60.469 65.000 0.00 0.00 0.00 4.70
2796 2952 1.112916 GCCTCCTCCTACCTCTGCTC 61.113 65.000 0.00 0.00 0.00 4.26
2797 2953 1.075600 GCCTCCTCCTACCTCTGCT 60.076 63.158 0.00 0.00 0.00 4.24
2798 2954 2.137528 GGCCTCCTCCTACCTCTGC 61.138 68.421 0.00 0.00 0.00 4.26
2799 2955 0.031616 AAGGCCTCCTCCTACCTCTG 60.032 60.000 5.23 0.00 34.82 3.35
2800 2956 0.263468 GAAGGCCTCCTCCTACCTCT 59.737 60.000 5.23 0.00 34.82 3.69
2801 2957 0.761323 GGAAGGCCTCCTCCTACCTC 60.761 65.000 15.32 1.57 41.61 3.85
2802 2958 1.315216 GGAAGGCCTCCTCCTACCT 59.685 63.158 15.32 0.00 41.61 3.08
2803 2959 1.766864 GGGAAGGCCTCCTCCTACC 60.767 68.421 20.67 5.14 44.68 3.18
2804 2960 2.134933 CGGGAAGGCCTCCTCCTAC 61.135 68.421 20.67 6.56 44.68 3.18
2805 2961 2.177529 AACGGGAAGGCCTCCTCCTA 62.178 60.000 20.67 0.00 44.68 2.94
2806 2962 3.564347 AACGGGAAGGCCTCCTCCT 62.564 63.158 20.67 0.00 44.68 3.69
2807 2963 3.009714 AACGGGAAGGCCTCCTCC 61.010 66.667 14.39 14.39 44.68 4.30
2808 2964 2.269241 CAACGGGAAGGCCTCCTC 59.731 66.667 5.23 0.00 44.68 3.71
2809 2965 4.035102 GCAACGGGAAGGCCTCCT 62.035 66.667 5.23 0.00 44.68 3.69
2810 2966 4.344865 TGCAACGGGAAGGCCTCC 62.345 66.667 5.23 9.41 44.54 4.30
2811 2967 3.056328 GTGCAACGGGAAGGCCTC 61.056 66.667 5.23 0.00 0.00 4.70
2812 2968 3.429372 TTGTGCAACGGGAAGGCCT 62.429 57.895 0.00 0.00 42.39 5.19
2813 2969 2.909965 TTGTGCAACGGGAAGGCC 60.910 61.111 0.00 0.00 42.39 5.19
2814 2970 2.335011 GTTGTGCAACGGGAAGGC 59.665 61.111 0.00 0.00 42.39 4.35
2822 2978 2.517402 TGGGGGACGTTGTGCAAC 60.517 61.111 5.07 5.07 37.92 4.17
2823 2979 2.063015 ATCTGGGGGACGTTGTGCAA 62.063 55.000 0.00 0.00 0.00 4.08
2824 2980 2.463589 GATCTGGGGGACGTTGTGCA 62.464 60.000 0.00 0.00 0.00 4.57
2825 2981 1.745489 GATCTGGGGGACGTTGTGC 60.745 63.158 0.00 0.00 0.00 4.57
2826 2982 1.447838 CGATCTGGGGGACGTTGTG 60.448 63.158 0.00 0.00 0.00 3.33
2827 2983 2.656069 CCGATCTGGGGGACGTTGT 61.656 63.158 0.00 0.00 0.00 3.32
2828 2984 1.686325 ATCCGATCTGGGGGACGTTG 61.686 60.000 0.00 0.00 38.76 4.10
2829 2985 0.981277 AATCCGATCTGGGGGACGTT 60.981 55.000 0.00 0.00 38.76 3.99
2830 2986 0.105862 TAATCCGATCTGGGGGACGT 60.106 55.000 0.00 0.00 38.76 4.34
2831 2987 0.603569 CTAATCCGATCTGGGGGACG 59.396 60.000 4.16 0.00 38.76 4.79
2832 2988 0.977395 CCTAATCCGATCTGGGGGAC 59.023 60.000 4.16 0.00 38.76 4.46
2833 2989 0.178903 CCCTAATCCGATCTGGGGGA 60.179 60.000 9.65 0.78 37.62 4.81
2834 2990 0.473886 ACCCTAATCCGATCTGGGGG 60.474 60.000 17.87 12.24 42.00 5.40
2835 2991 1.435256 AACCCTAATCCGATCTGGGG 58.565 55.000 17.87 14.09 42.00 4.96
2836 2992 3.008049 CCTAAACCCTAATCCGATCTGGG 59.992 52.174 14.03 14.03 43.26 4.45
2837 2993 3.008049 CCCTAAACCCTAATCCGATCTGG 59.992 52.174 0.00 0.00 40.09 3.86
2838 2994 3.901844 TCCCTAAACCCTAATCCGATCTG 59.098 47.826 0.00 0.00 0.00 2.90
2839 2995 4.209154 TCCCTAAACCCTAATCCGATCT 57.791 45.455 0.00 0.00 0.00 2.75
2840 2996 5.500546 AATCCCTAAACCCTAATCCGATC 57.499 43.478 0.00 0.00 0.00 3.69
2841 2997 5.924769 AAATCCCTAAACCCTAATCCGAT 57.075 39.130 0.00 0.00 0.00 4.18
2842 2998 5.308759 CCTAAATCCCTAAACCCTAATCCGA 59.691 44.000 0.00 0.00 0.00 4.55
2843 2999 5.308759 TCCTAAATCCCTAAACCCTAATCCG 59.691 44.000 0.00 0.00 0.00 4.18
2844 3000 6.240205 CCTCCTAAATCCCTAAACCCTAATCC 60.240 46.154 0.00 0.00 0.00 3.01
2845 3001 6.240205 CCCTCCTAAATCCCTAAACCCTAATC 60.240 46.154 0.00 0.00 0.00 1.75
2846 3002 5.615692 CCCTCCTAAATCCCTAAACCCTAAT 59.384 44.000 0.00 0.00 0.00 1.73
2847 3003 4.979690 CCCTCCTAAATCCCTAAACCCTAA 59.020 45.833 0.00 0.00 0.00 2.69
2848 3004 4.574005 CCCTCCTAAATCCCTAAACCCTA 58.426 47.826 0.00 0.00 0.00 3.53
2849 3005 3.404292 CCCTCCTAAATCCCTAAACCCT 58.596 50.000 0.00 0.00 0.00 4.34
2850 3006 2.158505 GCCCTCCTAAATCCCTAAACCC 60.159 54.545 0.00 0.00 0.00 4.11
2851 3007 2.512476 TGCCCTCCTAAATCCCTAAACC 59.488 50.000 0.00 0.00 0.00 3.27
2852 3008 3.945640 TGCCCTCCTAAATCCCTAAAC 57.054 47.619 0.00 0.00 0.00 2.01
2853 3009 4.293901 ACTTTGCCCTCCTAAATCCCTAAA 59.706 41.667 0.00 0.00 0.00 1.85
2854 3010 3.856206 ACTTTGCCCTCCTAAATCCCTAA 59.144 43.478 0.00 0.00 0.00 2.69
2855 3011 3.470868 ACTTTGCCCTCCTAAATCCCTA 58.529 45.455 0.00 0.00 0.00 3.53
2856 3012 2.288525 ACTTTGCCCTCCTAAATCCCT 58.711 47.619 0.00 0.00 0.00 4.20
2857 3013 2.828661 ACTTTGCCCTCCTAAATCCC 57.171 50.000 0.00 0.00 0.00 3.85
2858 3014 4.772886 TCTACTTTGCCCTCCTAAATCC 57.227 45.455 0.00 0.00 0.00 3.01
2859 3015 4.517075 GCATCTACTTTGCCCTCCTAAATC 59.483 45.833 0.00 0.00 33.95 2.17
2860 3016 4.079787 TGCATCTACTTTGCCCTCCTAAAT 60.080 41.667 0.00 0.00 39.39 1.40
2861 3017 3.265737 TGCATCTACTTTGCCCTCCTAAA 59.734 43.478 0.00 0.00 39.39 1.85
2862 3018 2.843730 TGCATCTACTTTGCCCTCCTAA 59.156 45.455 0.00 0.00 39.39 2.69
2863 3019 2.170607 GTGCATCTACTTTGCCCTCCTA 59.829 50.000 0.00 0.00 39.39 2.94
2864 3020 1.065126 GTGCATCTACTTTGCCCTCCT 60.065 52.381 0.00 0.00 39.39 3.69
2865 3021 1.383523 GTGCATCTACTTTGCCCTCC 58.616 55.000 0.00 0.00 39.39 4.30


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.