Multiple sequence alignment - TraesCS4A01G498600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G498600 chr4A 100.000 7783 0 0 1 7783 743955990 743948208 0.000000e+00 14373.0
1 TraesCS4A01G498600 chr4A 85.532 235 22 3 1477 1711 743954448 743954226 1.310000e-57 235.0
2 TraesCS4A01G498600 chr4A 85.532 235 22 3 1543 1765 743954514 743954280 1.310000e-57 235.0
3 TraesCS4A01G498600 chr4A 94.656 131 7 0 7560 7690 743941773 743941643 3.680000e-48 204.0
4 TraesCS4A01G498600 chr7D 92.368 3682 151 61 3950 7570 1299106 1295494 0.000000e+00 5123.0
5 TraesCS4A01G498600 chr7D 91.603 2477 111 34 1489 3953 1301619 1299228 0.000000e+00 3332.0
6 TraesCS4A01G498600 chr7D 86.303 825 67 25 510 1315 1302599 1301802 0.000000e+00 856.0
7 TraesCS4A01G498600 chr7D 80.385 260 30 13 1 255 1302987 1302744 2.230000e-40 178.0
8 TraesCS4A01G498600 chr7D 92.784 97 6 1 7687 7782 310282412 310282508 1.050000e-28 139.0
9 TraesCS4A01G498600 chr7D 83.117 154 14 2 1595 1748 1301600 1301459 6.340000e-26 130.0
10 TraesCS4A01G498600 chr7A 91.117 3591 198 50 464 3960 1369552 1373115 0.000000e+00 4752.0
11 TraesCS4A01G498600 chr7A 95.411 2070 54 14 3950 5998 1373147 1375196 0.000000e+00 3258.0
12 TraesCS4A01G498600 chr7A 88.050 1615 93 50 6001 7571 1375982 1377540 0.000000e+00 1821.0
13 TraesCS4A01G498600 chr7A 84.965 286 40 3 243 528 1369288 1369570 3.550000e-73 287.0
14 TraesCS4A01G498600 chr7A 93.194 191 13 0 1541 1731 1370755 1370945 1.650000e-71 281.0
15 TraesCS4A01G498600 chr7A 92.800 125 9 0 1541 1665 1370809 1370933 1.730000e-41 182.0
16 TraesCS4A01G498600 chr7A 94.118 51 3 0 1508 1558 1370809 1370859 2.330000e-10 78.7
17 TraesCS4A01G498600 chr7A 94.118 51 3 0 1508 1558 1370863 1370913 2.330000e-10 78.7
18 TraesCS4A01G498600 chr7A 100.000 30 0 0 1 30 1369091 1369120 1.000000e-03 56.5
19 TraesCS4A01G498600 chr3A 84.615 260 37 1 2282 2541 746586593 746586337 1.000000e-63 255.0
20 TraesCS4A01G498600 chr5D 92.857 98 6 1 7687 7783 35843486 35843389 2.930000e-29 141.0
21 TraesCS4A01G498600 chr5D 91.753 97 8 0 7687 7783 35838451 35838547 1.360000e-27 135.0
22 TraesCS4A01G498600 chr4B 92.857 98 6 1 7687 7783 469057064 469056967 2.930000e-29 141.0
23 TraesCS4A01G498600 chr4B 89.796 98 9 1 7687 7783 469053390 469053487 2.950000e-24 124.0
24 TraesCS4A01G498600 chr4B 91.379 58 3 1 7629 7684 408602220 408602277 2.330000e-10 78.7
25 TraesCS4A01G498600 chr3B 92.857 98 6 1 7687 7783 571887486 571887583 2.930000e-29 141.0
26 TraesCS4A01G498600 chr3B 90.816 98 8 1 7687 7783 571916475 571916378 6.340000e-26 130.0
27 TraesCS4A01G498600 chr5A 91.753 97 7 1 7687 7782 616139557 616139653 4.900000e-27 134.0
28 TraesCS4A01G498600 chr3D 96.774 62 0 1 7628 7687 394126119 394126058 1.380000e-17 102.0
29 TraesCS4A01G498600 chr1B 81.982 111 12 5 6618 6728 654804789 654804891 3.870000e-13 87.9
30 TraesCS4A01G498600 chr6B 91.667 60 3 1 7627 7684 572079268 572079327 1.800000e-11 82.4
31 TraesCS4A01G498600 chr5B 89.831 59 5 1 117 174 596200657 596200715 3.010000e-09 75.0
32 TraesCS4A01G498600 chr2D 93.878 49 1 1 7627 7673 632566750 632566702 1.080000e-08 73.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G498600 chr4A 743948208 743955990 7782 True 4947.666667 14373 90.354667 1 7783 3 chr4A.!!$R2 7782
1 TraesCS4A01G498600 chr7D 1295494 1302987 7493 True 1923.800000 5123 86.755200 1 7570 5 chr7D.!!$R1 7569
2 TraesCS4A01G498600 chr7A 1369091 1377540 8449 False 1199.433333 4752 92.641444 1 7571 9 chr7A.!!$F1 7570

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
365 495 0.037877 TTCGAGAGAGGTCTCCGGTT 59.962 55.000 0.00 0.00 45.91 4.44 F
1408 1666 0.107361 CGATGGGTTACCCTTGGACC 60.107 60.000 22.29 2.50 45.70 4.46 F
1433 1706 0.179936 GTAGCCAGCCAAGATGCTCT 59.820 55.000 0.00 0.00 40.32 4.09 F
2230 2605 1.091771 CATACCTGCTTCCACTGCCG 61.092 60.000 0.00 0.00 0.00 5.69 F
2273 2648 1.637553 ACCAGATTCCACTGCCAAGAT 59.362 47.619 0.00 0.00 36.67 2.40 F
3690 4068 1.002430 GATCACTGTTGCCCAGAGTCA 59.998 52.381 7.43 0.00 44.49 3.41 F
4639 5154 0.533951 TGCATGAGCTGTCGATGAGT 59.466 50.000 0.00 0.00 42.74 3.41 F
5253 5772 0.459237 AGCGCACTGTGATACTCTGC 60.459 55.000 11.47 3.19 0.00 4.26 F
5647 6175 1.066573 CAGCCTTTGTCGGAGTCAGAT 60.067 52.381 0.00 0.00 0.00 2.90 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2171 2546 1.153086 GGAGGATCAGCCAACGCAT 60.153 57.895 0.00 0.0 40.02 4.73 R
2691 3066 0.106708 TGATAGGCTCGTGCAATCCC 59.893 55.000 12.07 0.0 41.91 3.85 R
3206 3582 2.026822 ACCTTGGAGCCATCACACTTAG 60.027 50.000 0.00 0.0 0.00 2.18 R
3622 4000 1.373570 GGTAGCTGACCTGCAACATC 58.626 55.000 0.00 0.0 45.89 3.06 R
3889 4267 2.113860 TCTGATAACAACAGCAGGGC 57.886 50.000 0.00 0.0 32.75 5.19 R
5253 5772 0.924090 GCAGAAGGCGTACTTGATCG 59.076 55.000 0.00 0.0 40.21 3.69 R
6615 7939 1.589779 GCAGACTGCAAAACAAACAGC 59.410 47.619 22.62 0.0 44.26 4.40 R
6681 8005 0.320683 TCCATCTGCACAACCAGTCG 60.321 55.000 0.00 0.0 34.47 4.18 R
7639 9017 0.179034 GGCTGAGGCAGTCCCTTATG 60.179 60.000 0.00 0.0 46.60 1.90 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
35 36 1.871039 CTTTCCTTTTCGCCAAGACGA 59.129 47.619 0.00 0.00 41.04 4.20
43 44 1.214367 TCGCCAAGACGAAGAAACAC 58.786 50.000 0.00 0.00 39.54 3.32
44 45 0.234884 CGCCAAGACGAAGAAACACC 59.765 55.000 0.00 0.00 34.06 4.16
45 46 1.305201 GCCAAGACGAAGAAACACCA 58.695 50.000 0.00 0.00 0.00 4.17
46 47 1.002792 GCCAAGACGAAGAAACACCAC 60.003 52.381 0.00 0.00 0.00 4.16
70 71 3.572682 CCCCAAGGTTCTTTTCACCTAAC 59.427 47.826 0.00 0.00 44.48 2.34
71 72 4.211920 CCCAAGGTTCTTTTCACCTAACA 58.788 43.478 0.00 0.00 44.48 2.41
78 79 8.942338 AGGTTCTTTTCACCTAACAAAATTTC 57.058 30.769 0.00 0.00 43.34 2.17
79 80 8.536175 AGGTTCTTTTCACCTAACAAAATTTCA 58.464 29.630 0.00 0.00 43.34 2.69
90 91 7.655732 ACCTAACAAAATTTCAAGATTTTCCCG 59.344 33.333 0.00 0.00 37.17 5.14
99 100 2.103537 AGATTTTCCCGTGGTTACCG 57.896 50.000 0.00 0.00 0.00 4.02
100 101 1.624813 AGATTTTCCCGTGGTTACCGA 59.375 47.619 0.00 0.00 0.00 4.69
101 102 2.004733 GATTTTCCCGTGGTTACCGAG 58.995 52.381 0.00 0.00 0.00 4.63
102 103 0.758123 TTTTCCCGTGGTTACCGAGT 59.242 50.000 0.00 0.00 0.00 4.18
103 104 1.626686 TTTCCCGTGGTTACCGAGTA 58.373 50.000 0.00 0.00 0.00 2.59
106 107 2.178580 TCCCGTGGTTACCGAGTATTT 58.821 47.619 0.00 0.00 0.00 1.40
107 108 2.166254 TCCCGTGGTTACCGAGTATTTC 59.834 50.000 0.00 0.00 0.00 2.17
125 176 0.906775 TCGACACCCCTGGTAAATCC 59.093 55.000 0.00 0.00 32.11 3.01
142 193 2.818751 TCCCCATACCGAGCAAAAAT 57.181 45.000 0.00 0.00 0.00 1.82
143 194 3.935818 TCCCCATACCGAGCAAAAATA 57.064 42.857 0.00 0.00 0.00 1.40
144 195 3.547746 TCCCCATACCGAGCAAAAATAC 58.452 45.455 0.00 0.00 0.00 1.89
147 198 3.951680 CCCATACCGAGCAAAAATACCTT 59.048 43.478 0.00 0.00 0.00 3.50
148 199 4.036380 CCCATACCGAGCAAAAATACCTTC 59.964 45.833 0.00 0.00 0.00 3.46
174 226 7.961325 TTTGAAAATTTTGAATTCAAACGCC 57.039 28.000 28.78 17.51 43.99 5.68
182 234 0.675522 AATTCAAACGCCCGATCGGT 60.676 50.000 31.22 11.84 0.00 4.69
194 246 3.521529 GATCGGTGGCTGGATCGGG 62.522 68.421 0.00 0.00 30.76 5.14
221 273 1.111277 GGCCCATACCGAGCAAAAAT 58.889 50.000 0.00 0.00 0.00 1.82
223 275 2.034179 GGCCCATACCGAGCAAAAATAC 59.966 50.000 0.00 0.00 0.00 1.89
225 277 3.003378 GCCCATACCGAGCAAAAATACTC 59.997 47.826 0.00 0.00 0.00 2.59
230 282 1.406341 CCGAGCAAAAATACTCCCCGA 60.406 52.381 0.00 0.00 0.00 5.14
232 284 2.677037 CGAGCAAAAATACTCCCCGACT 60.677 50.000 0.00 0.00 0.00 4.18
280 410 2.954989 GGACCGAGTAAAGTAGGTAGGG 59.045 54.545 0.00 0.00 37.07 3.53
283 413 3.268072 ACCGAGTAAAGTAGGTAGGGTCT 59.732 47.826 0.00 0.00 34.83 3.85
290 420 9.639563 GAGTAAAGTAGGTAGGGTCTTAAGTAT 57.360 37.037 1.63 0.00 0.00 2.12
312 442 8.657712 AGTATTTTTACAGGAGTTGGTTCTAGT 58.342 33.333 0.00 0.00 0.00 2.57
330 460 3.402628 AGTGTGTTGGTAGCAACCTAG 57.597 47.619 29.46 0.00 46.91 3.02
333 463 2.038033 TGTGTTGGTAGCAACCTAGTCC 59.962 50.000 29.46 13.81 46.91 3.85
344 474 3.563223 CAACCTAGTCCCCTTCTCGATA 58.437 50.000 0.00 0.00 0.00 2.92
362 492 4.413495 GATATTTCGAGAGAGGTCTCCG 57.587 50.000 3.26 7.32 45.91 4.63
365 495 0.037877 TTCGAGAGAGGTCTCCGGTT 59.962 55.000 0.00 0.00 45.91 4.44
373 503 1.212229 GGTCTCCGGTTCGAGTGTC 59.788 63.158 0.00 0.00 0.00 3.67
374 504 1.212229 GTCTCCGGTTCGAGTGTCC 59.788 63.158 0.00 0.00 0.00 4.02
379 509 1.008194 CGGTTCGAGTGTCCGTTCA 60.008 57.895 10.63 0.00 39.51 3.18
384 514 2.347697 TCGAGTGTCCGTTCATTCAG 57.652 50.000 0.00 0.00 0.00 3.02
387 517 1.996191 GAGTGTCCGTTCATTCAGCTC 59.004 52.381 0.00 0.00 0.00 4.09
392 522 3.195610 TGTCCGTTCATTCAGCTCTGTAT 59.804 43.478 0.00 0.00 0.00 2.29
424 554 9.932699 TTTCAGAATACAAAAATGCAAAACATG 57.067 25.926 0.00 0.00 39.60 3.21
471 646 2.202570 AGACGTCACATACCGCGC 60.203 61.111 19.50 0.00 0.00 6.86
485 660 1.961277 CGCGCAGGGACAAAGTTCT 60.961 57.895 8.75 0.00 46.37 3.01
487 662 0.796927 GCGCAGGGACAAAGTTCTAC 59.203 55.000 0.30 0.00 0.00 2.59
496 671 3.006967 GGACAAAGTTCTACTGAGCTGGA 59.993 47.826 0.00 0.00 33.98 3.86
497 672 4.323104 GGACAAAGTTCTACTGAGCTGGAT 60.323 45.833 0.00 0.00 33.98 3.41
508 683 1.073216 GAGCTGGATGACACGACACG 61.073 60.000 0.00 0.00 0.00 4.49
536 711 3.736433 CGTGGAGACAGAAGCAAGATAGG 60.736 52.174 0.00 0.00 44.46 2.57
546 721 1.211212 AGCAAGATAGGCATGACAGCA 59.789 47.619 0.00 0.00 35.83 4.41
550 725 0.249615 GATAGGCATGACAGCAGCGA 60.250 55.000 0.00 0.00 35.83 4.93
551 726 0.531532 ATAGGCATGACAGCAGCGAC 60.532 55.000 0.00 0.00 35.83 5.19
552 727 2.889154 TAGGCATGACAGCAGCGACG 62.889 60.000 0.00 0.00 35.83 5.12
553 728 2.810887 GCATGACAGCAGCGACGA 60.811 61.111 0.00 0.00 0.00 4.20
579 759 1.083806 TGAGCTGGCGCATTTACGAG 61.084 55.000 10.83 0.00 39.10 4.18
586 766 2.452813 CGCATTTACGAGCCACGCT 61.453 57.895 0.00 0.00 46.94 5.07
628 810 2.251642 GCACACGCGTTTTCTCCCT 61.252 57.895 10.22 0.00 0.00 4.20
630 812 0.600255 CACACGCGTTTTCTCCCTCT 60.600 55.000 10.22 0.00 0.00 3.69
652 834 0.389391 CCGTGTTCTCGGCCAGATAT 59.611 55.000 2.24 0.00 43.96 1.63
656 838 3.191581 CGTGTTCTCGGCCAGATATAGAT 59.808 47.826 2.24 0.00 0.00 1.98
660 851 5.416013 TGTTCTCGGCCAGATATAGATACAG 59.584 44.000 2.24 0.00 0.00 2.74
662 853 5.186942 TCTCGGCCAGATATAGATACAGAC 58.813 45.833 2.24 0.00 0.00 3.51
663 854 4.270834 TCGGCCAGATATAGATACAGACC 58.729 47.826 2.24 0.00 0.00 3.85
667 858 5.185249 GGCCAGATATAGATACAGACCGAAA 59.815 44.000 0.00 0.00 0.00 3.46
708 899 8.757877 ACCAACCATATAACATAGCACAAAAAT 58.242 29.630 0.00 0.00 0.00 1.82
745 949 4.335037 TCCTTTTGAAAAGCAATTTGTGGC 59.665 37.500 12.03 0.00 36.15 5.01
755 959 2.483538 GCAATTTGTGGCAGGAAACACT 60.484 45.455 0.00 0.00 38.39 3.55
757 961 4.549458 CAATTTGTGGCAGGAAACACTAG 58.451 43.478 0.00 0.00 38.39 2.57
799 1006 8.946797 AAATGGAAGATTAGGATAAAGATGGG 57.053 34.615 0.00 0.00 0.00 4.00
800 1007 7.895144 ATGGAAGATTAGGATAAAGATGGGA 57.105 36.000 0.00 0.00 0.00 4.37
801 1008 7.321717 TGGAAGATTAGGATAAAGATGGGAG 57.678 40.000 0.00 0.00 0.00 4.30
802 1009 6.273260 TGGAAGATTAGGATAAAGATGGGAGG 59.727 42.308 0.00 0.00 0.00 4.30
804 1011 4.538089 AGATTAGGATAAAGATGGGAGGCC 59.462 45.833 0.00 0.00 0.00 5.19
825 1032 1.454663 GGGCATGAAGGAAGGAGGC 60.455 63.158 0.00 0.00 0.00 4.70
866 1073 0.762418 TTTTGGACGGAGCAGAGGAA 59.238 50.000 0.00 0.00 0.00 3.36
867 1074 0.321671 TTTGGACGGAGCAGAGGAAG 59.678 55.000 0.00 0.00 0.00 3.46
868 1075 1.544825 TTGGACGGAGCAGAGGAAGG 61.545 60.000 0.00 0.00 0.00 3.46
869 1076 1.682684 GGACGGAGCAGAGGAAGGA 60.683 63.158 0.00 0.00 0.00 3.36
895 1102 1.073177 ATAAACAAACGAGACGGGCG 58.927 50.000 0.00 0.00 0.00 6.13
922 1131 3.114647 CTTCCTCGCTCCGTCTCCG 62.115 68.421 0.00 0.00 0.00 4.63
923 1132 3.617143 TTCCTCGCTCCGTCTCCGA 62.617 63.158 0.00 0.00 35.63 4.55
925 1134 2.820479 CTCGCTCCGTCTCCGACT 60.820 66.667 0.00 0.00 35.63 4.18
926 1135 2.815298 CTCGCTCCGTCTCCGACTC 61.815 68.421 0.00 0.00 35.63 3.36
928 1137 2.750637 GCTCCGTCTCCGACTCCA 60.751 66.667 0.00 0.00 35.63 3.86
930 1139 2.360852 TCCGTCTCCGACTCCACC 60.361 66.667 0.00 0.00 35.63 4.61
931 1140 3.450115 CCGTCTCCGACTCCACCC 61.450 72.222 0.00 0.00 35.63 4.61
932 1141 3.450115 CGTCTCCGACTCCACCCC 61.450 72.222 0.00 0.00 35.63 4.95
933 1142 3.450115 GTCTCCGACTCCACCCCG 61.450 72.222 0.00 0.00 0.00 5.73
952 1162 1.873903 CGATCCATCCAAACCCTAGCG 60.874 57.143 0.00 0.00 0.00 4.26
1113 1332 3.620187 CTTCGCGCTGCAGTCGTTG 62.620 63.158 24.37 18.87 0.00 4.10
1125 1344 0.168348 AGTCGTTGTCGGAGATCACG 59.832 55.000 0.00 0.00 40.67 4.35
1128 1347 2.158959 GTTGTCGGAGATCACGGCG 61.159 63.158 4.80 4.80 40.67 6.46
1169 1388 4.521062 CCGCTCCCTTCTCGCCTG 62.521 72.222 0.00 0.00 0.00 4.85
1408 1666 0.107361 CGATGGGTTACCCTTGGACC 60.107 60.000 22.29 2.50 45.70 4.46
1432 1705 1.156645 CGTAGCCAGCCAAGATGCTC 61.157 60.000 0.00 0.00 40.32 4.26
1433 1706 0.179936 GTAGCCAGCCAAGATGCTCT 59.820 55.000 0.00 0.00 40.32 4.09
1495 1780 2.750637 CAGAGCTGCTGCCCAAGG 60.751 66.667 7.01 0.00 40.80 3.61
1496 1781 3.255397 AGAGCTGCTGCCCAAGGT 61.255 61.111 7.01 0.00 40.80 3.50
1497 1782 2.749441 GAGCTGCTGCCCAAGGTC 60.749 66.667 7.01 0.00 40.80 3.85
1498 1783 3.557903 GAGCTGCTGCCCAAGGTCA 62.558 63.158 7.01 0.00 40.80 4.02
1499 1784 3.060615 GCTGCTGCCCAAGGTCAG 61.061 66.667 3.85 0.00 32.70 3.51
1500 1785 3.060615 CTGCTGCCCAAGGTCAGC 61.061 66.667 14.77 14.77 45.74 4.26
1501 1786 4.666253 TGCTGCCCAAGGTCAGCC 62.666 66.667 18.34 2.69 45.31 4.85
1502 1787 4.666253 GCTGCCCAAGGTCAGCCA 62.666 66.667 10.88 0.00 42.54 4.75
1503 1788 2.674380 CTGCCCAAGGTCAGCCAC 60.674 66.667 0.00 0.00 37.19 5.01
1504 1789 4.641645 TGCCCAAGGTCAGCCACG 62.642 66.667 0.00 0.00 37.19 4.94
1505 1790 4.329545 GCCCAAGGTCAGCCACGA 62.330 66.667 0.00 0.00 37.19 4.35
1506 1791 2.358737 CCCAAGGTCAGCCACGAC 60.359 66.667 0.00 0.00 37.19 4.34
1507 1792 2.738521 CCAAGGTCAGCCACGACG 60.739 66.667 0.00 0.00 36.73 5.12
1508 1793 3.414700 CAAGGTCAGCCACGACGC 61.415 66.667 0.00 0.00 36.73 5.19
1509 1794 3.616721 AAGGTCAGCCACGACGCT 61.617 61.111 0.00 0.00 40.65 5.07
1517 1802 4.498520 CCACGACGCTGCCGAGAT 62.499 66.667 5.34 0.00 38.29 2.75
1518 1803 3.250323 CACGACGCTGCCGAGATG 61.250 66.667 5.34 0.00 38.29 2.90
1520 1805 4.862092 CGACGCTGCCGAGATGCT 62.862 66.667 0.00 0.00 38.29 3.79
1521 1806 3.260483 GACGCTGCCGAGATGCTG 61.260 66.667 0.00 0.00 38.29 4.41
1570 1855 4.680237 TGCCCGAAGTCAGCCACG 62.680 66.667 0.00 0.00 0.00 4.94
1627 1912 2.738521 CCGAGGTCAGCCACAACG 60.739 66.667 0.00 0.00 37.19 4.10
1632 1917 2.033194 GGTCAGCCACAACGCTACC 61.033 63.158 0.00 0.00 36.82 3.18
1666 2038 4.478371 CTGCCGAGATGCTGCCCA 62.478 66.667 0.00 0.00 0.00 5.36
1727 2099 2.244117 GAGATGCTGCCCGAGGTCAA 62.244 60.000 0.00 0.00 0.00 3.18
1904 2276 4.883354 GGGCCCCTGCTCATTCCG 62.883 72.222 12.23 0.00 38.13 4.30
1935 2307 4.493618 TGGAGAAGAAGAAGGAAGAGGAA 58.506 43.478 0.00 0.00 0.00 3.36
1936 2308 4.284746 TGGAGAAGAAGAAGGAAGAGGAAC 59.715 45.833 0.00 0.00 0.00 3.62
2005 2380 1.203187 TCCCTGCTCCTGTAACAGAGT 60.203 52.381 0.00 0.00 32.44 3.24
2056 2431 4.504916 CAGGAGTCGAGCCCAGCG 62.505 72.222 5.88 0.00 0.00 5.18
2130 2505 1.589716 ATGCACCTTCGGCTTTGCTC 61.590 55.000 0.00 0.00 35.91 4.26
2156 2531 2.165030 CCACTGCTGGATCAAATGAACC 59.835 50.000 2.96 2.96 40.55 3.62
2163 2538 3.156293 TGGATCAAATGAACCCAGTGTG 58.844 45.455 7.19 0.00 36.29 3.82
2230 2605 1.091771 CATACCTGCTTCCACTGCCG 61.092 60.000 0.00 0.00 0.00 5.69
2258 2633 4.408821 GGATGCCGCCACACCAGA 62.409 66.667 0.00 0.00 0.00 3.86
2273 2648 1.637553 ACCAGATTCCACTGCCAAGAT 59.362 47.619 0.00 0.00 36.67 2.40
2334 2709 2.347322 GGACAGAGAGACCGCAGCT 61.347 63.158 0.00 0.00 0.00 4.24
2466 2841 1.743252 GCCTGAAGAGCCCGTTGAG 60.743 63.158 0.00 0.00 0.00 3.02
2691 3066 3.057315 CAGCACCACTTTACTCCATTTGG 60.057 47.826 0.00 0.00 0.00 3.28
2718 3093 2.279517 GAGCCTATCACCGCACCG 60.280 66.667 0.00 0.00 0.00 4.94
3235 3611 4.816925 GTGATGGCTCCAAGGTTAGTATTC 59.183 45.833 0.00 0.00 0.00 1.75
3247 3623 6.713731 AGGTTAGTATTCCTTCCCTTCAAA 57.286 37.500 0.00 0.00 0.00 2.69
3429 3807 8.608844 ACATCTACTTAGCAAATGGTAATAGC 57.391 34.615 5.61 0.00 37.37 2.97
3575 3953 9.399797 TGAGACTTTCATGCTTATGTAATTCAT 57.600 29.630 0.00 0.00 40.25 2.57
3576 3954 9.875675 GAGACTTTCATGCTTATGTAATTCATC 57.124 33.333 0.00 0.00 37.91 2.92
3577 3955 9.399797 AGACTTTCATGCTTATGTAATTCATCA 57.600 29.630 0.00 0.00 37.91 3.07
3601 3979 5.368816 AGGGAGTTGTAGTAGTTTCCTTTGT 59.631 40.000 0.00 0.00 0.00 2.83
3622 4000 2.715046 TGCCTTTGCTTATGTCTCCTG 58.285 47.619 0.00 0.00 38.71 3.86
3651 4029 3.127425 GGTCAGCTACCTTCACAAACT 57.873 47.619 5.42 0.00 45.75 2.66
3670 4048 3.244670 CTGAAGAACAGTTTCTGTGCG 57.755 47.619 3.12 0.00 44.32 5.34
3675 4053 2.802816 AGAACAGTTTCTGTGCGATCAC 59.197 45.455 3.12 0.00 44.32 3.06
3690 4068 1.002430 GATCACTGTTGCCCAGAGTCA 59.998 52.381 7.43 0.00 44.49 3.41
3767 4145 8.757789 CAGGTGTGCAATTTAATAAGCATAATG 58.242 33.333 7.95 5.31 39.43 1.90
3889 4267 7.591006 TTTGTTCAGGAGCTATTACTTTACG 57.409 36.000 0.00 0.00 0.00 3.18
3892 4270 3.069158 TCAGGAGCTATTACTTTACGCCC 59.931 47.826 0.00 0.00 0.00 6.13
3893 4271 3.069729 CAGGAGCTATTACTTTACGCCCT 59.930 47.826 0.00 0.00 0.00 5.19
3894 4272 3.069729 AGGAGCTATTACTTTACGCCCTG 59.930 47.826 0.00 0.00 0.00 4.45
3898 4276 2.781681 ATTACTTTACGCCCTGCTGT 57.218 45.000 0.00 0.00 0.00 4.40
3905 4286 2.018542 TACGCCCTGCTGTTGTTATC 57.981 50.000 0.00 0.00 0.00 1.75
3912 4293 4.082026 GCCCTGCTGTTGTTATCAGAAAAT 60.082 41.667 0.00 0.00 35.20 1.82
3922 4303 9.959749 TGTTGTTATCAGAAAATTAAGTTGTCC 57.040 29.630 0.00 0.00 0.00 4.02
3926 4307 9.750882 GTTATCAGAAAATTAAGTTGTCCGTAC 57.249 33.333 0.00 0.00 0.00 3.67
3940 4321 1.402968 TCCGTACCGCTATCTGACAAC 59.597 52.381 0.00 0.00 0.00 3.32
3949 4330 3.928992 CGCTATCTGACAACACTGTTGAT 59.071 43.478 25.50 12.49 35.30 2.57
4220 4726 5.836024 AGTAACCTACTTTGTTGATGGGA 57.164 39.130 0.00 0.00 34.86 4.37
4378 4889 2.983592 CAAAGTGGTGCGTCCCCC 60.984 66.667 0.00 0.00 34.77 5.40
4426 4938 4.082245 GTGTATCCATTTTTGTCCCTGTGG 60.082 45.833 0.00 0.00 0.00 4.17
4574 5089 5.291858 TGTCTGCTTGCTCTTATTTATCACG 59.708 40.000 0.00 0.00 0.00 4.35
4639 5154 0.533951 TGCATGAGCTGTCGATGAGT 59.466 50.000 0.00 0.00 42.74 3.41
4795 5313 1.937899 ACTAACGGTCAATAATGCGCC 59.062 47.619 4.18 0.00 0.00 6.53
4908 5426 2.356667 GCCTGGAGTTCCCTTGGG 59.643 66.667 0.00 0.00 35.38 4.12
5119 5637 5.627499 TTGTCCTAAAATGTTGCTAGCTG 57.373 39.130 17.23 0.00 0.00 4.24
5135 5653 2.648059 AGCTGTGCTGTCACTTTCTTT 58.352 42.857 0.00 0.00 43.49 2.52
5136 5654 2.615912 AGCTGTGCTGTCACTTTCTTTC 59.384 45.455 0.00 0.00 43.49 2.62
5137 5655 2.615912 GCTGTGCTGTCACTTTCTTTCT 59.384 45.455 4.39 0.00 43.49 2.52
5138 5656 3.065925 GCTGTGCTGTCACTTTCTTTCTT 59.934 43.478 4.39 0.00 43.49 2.52
5253 5772 0.459237 AGCGCACTGTGATACTCTGC 60.459 55.000 11.47 3.19 0.00 4.26
5446 5965 6.669278 CCTGAAGGTTAGCACTTAAAAACTC 58.331 40.000 0.00 0.00 0.00 3.01
5466 5985 7.454260 AACTCCATCTCCACATTTAAGTTTC 57.546 36.000 0.00 0.00 0.00 2.78
5647 6175 1.066573 CAGCCTTTGTCGGAGTCAGAT 60.067 52.381 0.00 0.00 0.00 2.90
5662 6190 7.885399 TCGGAGTCAGATCTTGATATCATAAGA 59.115 37.037 6.17 7.89 38.29 2.10
5689 6217 5.576447 AACACGAGTCAAAAGGTTTGATT 57.424 34.783 6.69 2.86 0.00 2.57
5695 6223 6.659242 ACGAGTCAAAAGGTTTGATTATGGAT 59.341 34.615 6.69 0.00 0.00 3.41
5696 6224 6.968904 CGAGTCAAAAGGTTTGATTATGGATG 59.031 38.462 6.69 0.00 0.00 3.51
5697 6225 7.362056 CGAGTCAAAAGGTTTGATTATGGATGT 60.362 37.037 6.69 0.00 0.00 3.06
5748 6276 1.270839 TGGTAGAAGTGCCACTGAAGC 60.271 52.381 0.00 0.00 32.64 3.86
5888 6418 3.751175 TGTATGCTAACTGGTTCACTTGC 59.249 43.478 0.00 0.00 0.00 4.01
5942 6472 2.154462 CCAATCATCGAAGCCCATACC 58.846 52.381 0.00 0.00 0.00 2.73
5998 6528 4.903045 AAGAGAAGATAACCGTTTCCCA 57.097 40.909 0.00 0.00 0.00 4.37
6012 7325 5.986741 ACCGTTTCCCAATATTTTGTTCAAC 59.013 36.000 0.00 0.00 0.00 3.18
6013 7326 5.986135 CCGTTTCCCAATATTTTGTTCAACA 59.014 36.000 0.00 0.00 0.00 3.33
6027 7340 5.464030 TGTTCAACACCTAGAGTAGAACC 57.536 43.478 0.00 0.00 35.06 3.62
6031 7344 1.817447 ACACCTAGAGTAGAACCGTGC 59.183 52.381 0.00 0.00 0.00 5.34
6181 7495 5.883503 AAAATTGGCCATACTTTTGCATG 57.116 34.783 6.09 0.00 0.00 4.06
6238 7554 3.106407 GTCGTGTCGGCAGCACTC 61.106 66.667 0.00 0.00 34.91 3.51
6289 7605 1.172180 TGCCACTGGTTGCTACAAGC 61.172 55.000 2.26 2.68 42.82 4.01
6315 7631 3.753294 TCTTCAAGGACTGGTGAGTTC 57.247 47.619 0.00 0.00 30.16 3.01
6401 7717 6.634805 ACCTGTGTGTTCTATTCACATCTAG 58.365 40.000 2.23 0.00 45.43 2.43
6556 7880 3.145551 CCAGCTGCCCATGAAGCC 61.146 66.667 8.66 0.00 40.42 4.35
6613 7937 2.044793 TCCCTCAGGATCAGGTTTGT 57.955 50.000 0.00 0.00 37.19 2.83
6614 7938 2.348472 TCCCTCAGGATCAGGTTTGTT 58.652 47.619 0.00 0.00 37.19 2.83
6615 7939 2.040278 TCCCTCAGGATCAGGTTTGTTG 59.960 50.000 0.00 0.00 37.19 3.33
6616 7940 1.815003 CCTCAGGATCAGGTTTGTTGC 59.185 52.381 0.00 0.00 0.00 4.17
6617 7941 2.553904 CCTCAGGATCAGGTTTGTTGCT 60.554 50.000 0.00 0.00 0.00 3.91
6629 7953 3.058639 GGTTTGTTGCTGTTTGTTTTGCA 60.059 39.130 0.00 0.00 0.00 4.08
6645 7969 6.105333 TGTTTTGCAGTCTGCTATTTTGTTT 58.895 32.000 24.76 0.00 45.31 2.83
6680 8004 6.801718 TGGAGGGAGTAAATCTAATCGAAA 57.198 37.500 0.00 0.00 0.00 3.46
6681 8005 6.579865 TGGAGGGAGTAAATCTAATCGAAAC 58.420 40.000 0.00 0.00 0.00 2.78
6811 8140 4.511838 AAGCCGCCCTTTGCTTAA 57.488 50.000 0.00 0.00 45.51 1.85
6830 8160 6.148315 TGCTTAAAATGGAGATATGCTCATCG 59.852 38.462 0.00 0.00 45.81 3.84
6893 8223 2.336945 AAGATGATGAAGCATGGCGA 57.663 45.000 0.00 0.00 0.00 5.54
6905 8235 3.018856 AGCATGGCGAAAAAGATGATGA 58.981 40.909 0.00 0.00 0.00 2.92
6906 8236 3.635373 AGCATGGCGAAAAAGATGATGAT 59.365 39.130 0.00 0.00 0.00 2.45
6910 8240 7.175467 AGCATGGCGAAAAAGATGATGATATAA 59.825 33.333 0.00 0.00 0.00 0.98
6934 8264 8.595362 AATTACTTCAAATCTAAAAGAGGGGG 57.405 34.615 0.00 0.00 0.00 5.40
6941 8271 4.984146 ATCTAAAAGAGGGGGAGCATAC 57.016 45.455 0.00 0.00 0.00 2.39
6952 8282 4.349342 AGGGGGAGCATACAAGAAAGATAG 59.651 45.833 0.00 0.00 0.00 2.08
6964 8294 5.049405 ACAAGAAAGATAGCAGAAACAACCG 60.049 40.000 0.00 0.00 0.00 4.44
6995 8325 7.125659 TGTTTGATCCTGTGGTGAAGATAGATA 59.874 37.037 0.00 0.00 0.00 1.98
7002 8332 6.268617 CCTGTGGTGAAGATAGATATGGAGAA 59.731 42.308 0.00 0.00 0.00 2.87
7023 8354 2.434774 GGAACAGGGGAAGCGGTT 59.565 61.111 0.00 0.00 0.00 4.44
7031 8362 0.250770 GGGGAAGCGGTTGTTCTCTT 60.251 55.000 3.70 0.00 0.00 2.85
7036 8367 1.005394 GCGGTTGTTCTCTTCCGGA 60.005 57.895 0.00 0.00 42.71 5.14
7041 8372 3.998341 CGGTTGTTCTCTTCCGGATTTTA 59.002 43.478 4.15 0.00 39.41 1.52
7046 8377 7.541091 GGTTGTTCTCTTCCGGATTTTATTTTC 59.459 37.037 4.15 0.00 0.00 2.29
7072 8403 6.365839 GTTTTGTACTTTTAGTAGGGCGTTC 58.634 40.000 0.00 0.00 30.12 3.95
7088 8419 3.258228 TTCAGCTGAGCCGCCATGT 62.258 57.895 17.43 0.00 0.00 3.21
7093 8424 4.147449 TGAGCCGCCATGTCGAGG 62.147 66.667 0.00 0.00 0.00 4.63
7102 8433 2.510238 ATGTCGAGGAGCAAGCGC 60.510 61.111 0.00 0.00 38.99 5.92
7113 8445 1.839407 GCAAGCGCTGTTGTTTTCG 59.161 52.632 12.58 0.00 34.30 3.46
7119 8451 2.096417 AGCGCTGTTGTTTTCGATGTAC 60.096 45.455 10.39 0.00 0.00 2.90
7154 8486 2.514458 AGGAACTGCGGAATGGAATT 57.486 45.000 0.00 0.00 36.52 2.17
7155 8487 2.807676 AGGAACTGCGGAATGGAATTT 58.192 42.857 0.00 0.00 33.71 1.82
7156 8488 3.165071 AGGAACTGCGGAATGGAATTTT 58.835 40.909 0.00 0.00 33.71 1.82
7157 8489 3.056607 AGGAACTGCGGAATGGAATTTTG 60.057 43.478 0.00 0.00 33.71 2.44
7158 8490 3.306019 GGAACTGCGGAATGGAATTTTGT 60.306 43.478 0.00 0.00 36.07 2.83
7159 8491 3.302365 ACTGCGGAATGGAATTTTGTG 57.698 42.857 0.00 0.00 36.07 3.33
7160 8492 2.029110 ACTGCGGAATGGAATTTTGTGG 60.029 45.455 0.00 0.00 36.07 4.17
7161 8493 1.337635 TGCGGAATGGAATTTTGTGGC 60.338 47.619 0.00 0.00 36.07 5.01
7162 8494 1.627879 CGGAATGGAATTTTGTGGCG 58.372 50.000 0.00 0.00 36.07 5.69
7163 8495 1.201181 CGGAATGGAATTTTGTGGCGA 59.799 47.619 0.00 0.00 36.07 5.54
7164 8496 2.159254 CGGAATGGAATTTTGTGGCGAT 60.159 45.455 0.00 0.00 36.07 4.58
7168 8500 3.080300 TGGAATTTTGTGGCGATAGGT 57.920 42.857 0.00 0.00 0.00 3.08
7170 8502 2.752903 GGAATTTTGTGGCGATAGGTGT 59.247 45.455 0.00 0.00 0.00 4.16
7190 8522 2.034558 GTGATGTTGTCTGTTGGGTTGG 59.965 50.000 0.00 0.00 0.00 3.77
7191 8523 1.613437 GATGTTGTCTGTTGGGTTGGG 59.387 52.381 0.00 0.00 0.00 4.12
7211 8543 3.307410 GGGGGTGGTTGAAATTTTGATCC 60.307 47.826 0.00 0.00 0.00 3.36
7247 8579 1.529865 GGCGCGTTTGTAAGAAAGAGT 59.470 47.619 8.43 0.00 0.00 3.24
7248 8580 2.032290 GGCGCGTTTGTAAGAAAGAGTT 60.032 45.455 8.43 0.00 0.00 3.01
7288 8631 9.476928 AATTTTGATGAGAAATGAGGAGAGATT 57.523 29.630 0.00 0.00 0.00 2.40
7290 8633 7.860918 TTGATGAGAAATGAGGAGAGATTTG 57.139 36.000 0.00 0.00 0.00 2.32
7295 8638 2.293598 ATGAGGAGAGATTTGGGGGT 57.706 50.000 0.00 0.00 0.00 4.95
7311 8654 4.243643 TGGGGGTTTGGATAAATTGGTTT 58.756 39.130 0.00 0.00 0.00 3.27
7312 8655 4.042187 TGGGGGTTTGGATAAATTGGTTTG 59.958 41.667 0.00 0.00 0.00 2.93
7313 8656 4.042311 GGGGGTTTGGATAAATTGGTTTGT 59.958 41.667 0.00 0.00 0.00 2.83
7314 8657 5.456907 GGGGGTTTGGATAAATTGGTTTGTT 60.457 40.000 0.00 0.00 0.00 2.83
7315 8658 5.471797 GGGGTTTGGATAAATTGGTTTGTTG 59.528 40.000 0.00 0.00 0.00 3.33
7316 8659 5.471797 GGGTTTGGATAAATTGGTTTGTTGG 59.528 40.000 0.00 0.00 0.00 3.77
7320 8663 5.615289 TGGATAAATTGGTTTGTTGGTTGG 58.385 37.500 0.00 0.00 0.00 3.77
7341 8684 4.538490 TGGTTGTACCTTACCTGATGGATT 59.462 41.667 9.48 0.00 39.58 3.01
7344 8687 6.935208 GGTTGTACCTTACCTGATGGATTATC 59.065 42.308 0.00 0.00 34.73 1.75
7354 8697 5.429762 ACCTGATGGATTATCACCTTGAGAA 59.570 40.000 0.00 0.00 40.82 2.87
7389 8741 3.693085 ACTCATGTGATGGCTTTAGCTTG 59.307 43.478 0.94 0.00 41.70 4.01
7391 8743 2.205022 TGTGATGGCTTTAGCTTGCT 57.795 45.000 0.00 0.00 41.70 3.91
7423 8800 3.249986 ACATGTGTGTTTTGCTTTGCT 57.750 38.095 0.00 0.00 34.01 3.91
7424 8801 3.598299 ACATGTGTGTTTTGCTTTGCTT 58.402 36.364 0.00 0.00 34.01 3.91
7440 8817 6.094048 TGCTTTGCTTCACATCCTATAGAAAC 59.906 38.462 0.00 0.00 0.00 2.78
7441 8818 6.094048 GCTTTGCTTCACATCCTATAGAAACA 59.906 38.462 0.00 0.00 0.00 2.83
7443 8820 8.579850 TTTGCTTCACATCCTATAGAAACAAT 57.420 30.769 0.00 0.00 29.52 2.71
7446 8823 8.677300 TGCTTCACATCCTATAGAAACAATTTC 58.323 33.333 0.00 0.00 39.96 2.17
7447 8824 8.677300 GCTTCACATCCTATAGAAACAATTTCA 58.323 33.333 0.00 0.00 42.10 2.69
7471 8848 6.627395 AAATGAATGCATGCCATATTTTGG 57.373 33.333 16.68 0.00 40.38 3.28
7492 8869 5.531634 TGGTTTTTGAGAATGCATGACTTC 58.468 37.500 0.00 0.00 0.00 3.01
7498 8875 4.143543 TGAGAATGCATGACTTCAACCAA 58.856 39.130 0.00 0.00 0.00 3.67
7590 8968 8.792830 TTGTTAATTGTTTGGGATTGTTTTGA 57.207 26.923 0.00 0.00 0.00 2.69
7591 8969 8.430801 TGTTAATTGTTTGGGATTGTTTTGAG 57.569 30.769 0.00 0.00 0.00 3.02
7592 8970 8.260818 TGTTAATTGTTTGGGATTGTTTTGAGA 58.739 29.630 0.00 0.00 0.00 3.27
7593 8971 8.764287 GTTAATTGTTTGGGATTGTTTTGAGAG 58.236 33.333 0.00 0.00 0.00 3.20
7594 8972 6.729690 ATTGTTTGGGATTGTTTTGAGAGA 57.270 33.333 0.00 0.00 0.00 3.10
7595 8973 6.537453 TTGTTTGGGATTGTTTTGAGAGAA 57.463 33.333 0.00 0.00 0.00 2.87
7596 8974 5.901552 TGTTTGGGATTGTTTTGAGAGAAC 58.098 37.500 0.00 0.00 0.00 3.01
7597 8975 5.420421 TGTTTGGGATTGTTTTGAGAGAACA 59.580 36.000 0.00 0.00 35.36 3.18
7598 8976 6.098124 TGTTTGGGATTGTTTTGAGAGAACAT 59.902 34.615 0.00 0.00 36.92 2.71
7599 8977 5.964958 TGGGATTGTTTTGAGAGAACATC 57.035 39.130 0.00 0.00 36.92 3.06
7600 8978 5.384336 TGGGATTGTTTTGAGAGAACATCA 58.616 37.500 0.00 0.00 36.92 3.07
7601 8979 6.012113 TGGGATTGTTTTGAGAGAACATCAT 58.988 36.000 0.00 0.00 36.92 2.45
7602 8980 6.071784 TGGGATTGTTTTGAGAGAACATCATG 60.072 38.462 0.00 0.00 36.92 3.07
7603 8981 6.151648 GGGATTGTTTTGAGAGAACATCATGA 59.848 38.462 0.00 0.00 36.92 3.07
7604 8982 7.025963 GGATTGTTTTGAGAGAACATCATGAC 58.974 38.462 0.00 0.00 36.92 3.06
7605 8983 7.094463 GGATTGTTTTGAGAGAACATCATGACT 60.094 37.037 0.00 0.00 36.92 3.41
7606 8984 7.572523 TTGTTTTGAGAGAACATCATGACTT 57.427 32.000 0.00 0.00 36.92 3.01
7607 8985 6.962686 TGTTTTGAGAGAACATCATGACTTG 58.037 36.000 0.00 0.00 32.44 3.16
7608 8986 6.543465 TGTTTTGAGAGAACATCATGACTTGT 59.457 34.615 0.00 0.00 32.44 3.16
7609 8987 7.067372 TGTTTTGAGAGAACATCATGACTTGTT 59.933 33.333 13.27 13.27 38.71 2.83
7610 8988 6.549912 TTGAGAGAACATCATGACTTGTTG 57.450 37.500 17.29 5.65 36.25 3.33
7611 8989 5.857268 TGAGAGAACATCATGACTTGTTGA 58.143 37.500 17.29 0.00 36.25 3.18
7612 8990 6.470278 TGAGAGAACATCATGACTTGTTGAT 58.530 36.000 17.29 7.56 36.25 2.57
7613 8991 6.938596 TGAGAGAACATCATGACTTGTTGATT 59.061 34.615 17.29 5.20 36.25 2.57
7614 8992 8.096414 TGAGAGAACATCATGACTTGTTGATTA 58.904 33.333 17.29 0.66 36.25 1.75
7615 8993 8.489990 AGAGAACATCATGACTTGTTGATTAG 57.510 34.615 17.29 0.00 36.25 1.73
7616 8994 7.551974 AGAGAACATCATGACTTGTTGATTAGG 59.448 37.037 17.29 0.00 36.25 2.69
7617 8995 7.397221 AGAACATCATGACTTGTTGATTAGGA 58.603 34.615 17.29 0.00 36.25 2.94
7618 8996 7.884877 AGAACATCATGACTTGTTGATTAGGAA 59.115 33.333 17.29 0.00 36.25 3.36
7619 8997 8.585471 AACATCATGACTTGTTGATTAGGAAT 57.415 30.769 12.75 0.00 34.87 3.01
7620 8998 8.585471 ACATCATGACTTGTTGATTAGGAATT 57.415 30.769 0.00 0.00 30.24 2.17
7621 8999 9.685276 ACATCATGACTTGTTGATTAGGAATTA 57.315 29.630 0.00 0.00 30.24 1.40
7631 9009 9.627123 TTGTTGATTAGGAATTATCTTAGGTGG 57.373 33.333 0.00 0.00 0.00 4.61
7632 9010 8.217799 TGTTGATTAGGAATTATCTTAGGTGGG 58.782 37.037 0.00 0.00 0.00 4.61
7633 9011 7.329746 TGATTAGGAATTATCTTAGGTGGGG 57.670 40.000 0.00 0.00 0.00 4.96
7634 9012 6.274672 TGATTAGGAATTATCTTAGGTGGGGG 59.725 42.308 0.00 0.00 0.00 5.40
7635 9013 4.035967 AGGAATTATCTTAGGTGGGGGT 57.964 45.455 0.00 0.00 0.00 4.95
7636 9014 3.722101 AGGAATTATCTTAGGTGGGGGTG 59.278 47.826 0.00 0.00 0.00 4.61
7637 9015 3.181433 GGAATTATCTTAGGTGGGGGTGG 60.181 52.174 0.00 0.00 0.00 4.61
7638 9016 1.901648 TTATCTTAGGTGGGGGTGGG 58.098 55.000 0.00 0.00 0.00 4.61
7639 9017 0.696485 TATCTTAGGTGGGGGTGGGC 60.696 60.000 0.00 0.00 0.00 5.36
7640 9018 2.798760 ATCTTAGGTGGGGGTGGGCA 62.799 60.000 0.00 0.00 0.00 5.36
7641 9019 2.204385 TTAGGTGGGGGTGGGCAT 60.204 61.111 0.00 0.00 0.00 4.40
7642 9020 0.991355 CTTAGGTGGGGGTGGGCATA 60.991 60.000 0.00 0.00 0.00 3.14
7643 9021 0.552864 TTAGGTGGGGGTGGGCATAA 60.553 55.000 0.00 0.00 0.00 1.90
7644 9022 0.991355 TAGGTGGGGGTGGGCATAAG 60.991 60.000 0.00 0.00 0.00 1.73
7645 9023 2.278738 GTGGGGGTGGGCATAAGG 59.721 66.667 0.00 0.00 0.00 2.69
7646 9024 3.026847 TGGGGGTGGGCATAAGGG 61.027 66.667 0.00 0.00 0.00 3.95
7647 9025 2.698406 GGGGGTGGGCATAAGGGA 60.698 66.667 0.00 0.00 0.00 4.20
7648 9026 2.601299 GGGGTGGGCATAAGGGAC 59.399 66.667 0.00 0.00 0.00 4.46
7650 9028 1.227383 GGGTGGGCATAAGGGACTG 59.773 63.158 0.00 0.00 40.86 3.51
7651 9029 1.453928 GGTGGGCATAAGGGACTGC 60.454 63.158 0.00 0.00 40.86 4.40
7656 9034 3.393472 GCATAAGGGACTGCCTCAG 57.607 57.895 0.00 0.00 40.86 3.35
7657 9035 0.817229 GCATAAGGGACTGCCTCAGC 60.817 60.000 0.00 0.00 40.86 4.26
7658 9036 0.179034 CATAAGGGACTGCCTCAGCC 60.179 60.000 0.00 0.00 40.86 4.85
7659 9037 1.348775 ATAAGGGACTGCCTCAGCCC 61.349 60.000 14.40 14.40 43.30 5.19
7660 9038 2.763988 TAAGGGACTGCCTCAGCCCA 62.764 60.000 20.40 5.99 44.44 5.36
7661 9039 3.415087 GGGACTGCCTCAGCCCAT 61.415 66.667 16.21 0.00 42.85 4.00
7662 9040 2.191641 GGACTGCCTCAGCCCATC 59.808 66.667 0.00 0.00 34.11 3.51
7663 9041 2.191641 GACTGCCTCAGCCCATCC 59.808 66.667 0.00 0.00 38.69 3.51
7664 9042 3.412624 GACTGCCTCAGCCCATCCC 62.413 68.421 0.00 0.00 38.69 3.85
7665 9043 3.414193 CTGCCTCAGCCCATCCCA 61.414 66.667 0.00 0.00 38.69 4.37
7666 9044 3.711059 CTGCCTCAGCCCATCCCAC 62.711 68.421 0.00 0.00 38.69 4.61
7667 9045 3.415087 GCCTCAGCCCATCCCACT 61.415 66.667 0.00 0.00 0.00 4.00
7668 9046 2.988839 GCCTCAGCCCATCCCACTT 61.989 63.158 0.00 0.00 0.00 3.16
7669 9047 1.635817 GCCTCAGCCCATCCCACTTA 61.636 60.000 0.00 0.00 0.00 2.24
7670 9048 0.918983 CCTCAGCCCATCCCACTTAA 59.081 55.000 0.00 0.00 0.00 1.85
7671 9049 1.496429 CCTCAGCCCATCCCACTTAAT 59.504 52.381 0.00 0.00 0.00 1.40
7672 9050 2.579873 CTCAGCCCATCCCACTTAATG 58.420 52.381 0.00 0.00 0.00 1.90
7673 9051 2.173356 CTCAGCCCATCCCACTTAATGA 59.827 50.000 0.00 0.00 0.00 2.57
7674 9052 2.092429 TCAGCCCATCCCACTTAATGAC 60.092 50.000 0.00 0.00 0.00 3.06
7675 9053 1.215423 AGCCCATCCCACTTAATGACC 59.785 52.381 0.00 0.00 0.00 4.02
7676 9054 1.215423 GCCCATCCCACTTAATGACCT 59.785 52.381 0.00 0.00 0.00 3.85
7677 9055 2.358195 GCCCATCCCACTTAATGACCTT 60.358 50.000 0.00 0.00 0.00 3.50
7678 9056 3.117663 GCCCATCCCACTTAATGACCTTA 60.118 47.826 0.00 0.00 0.00 2.69
7679 9057 4.718961 CCCATCCCACTTAATGACCTTAG 58.281 47.826 0.00 0.00 0.00 2.18
7680 9058 4.166144 CCCATCCCACTTAATGACCTTAGT 59.834 45.833 0.00 0.00 0.00 2.24
7681 9059 5.126067 CCATCCCACTTAATGACCTTAGTG 58.874 45.833 0.00 0.00 0.00 2.74
7682 9060 4.837093 TCCCACTTAATGACCTTAGTGG 57.163 45.455 12.08 12.08 44.44 4.00
7684 9062 3.279434 CCACTTAATGACCTTAGTGGGC 58.721 50.000 11.36 0.00 46.75 5.36
7691 9069 2.100605 GACCTTAGTGGGCACTCAAG 57.899 55.000 0.00 0.00 45.54 3.02
7692 9070 1.348036 GACCTTAGTGGGCACTCAAGT 59.652 52.381 0.00 0.00 45.54 3.16
7693 9071 1.774856 ACCTTAGTGGGCACTCAAGTT 59.225 47.619 0.00 0.00 42.54 2.66
7694 9072 2.224548 ACCTTAGTGGGCACTCAAGTTC 60.225 50.000 0.00 0.00 42.54 3.01
7695 9073 2.427506 CTTAGTGGGCACTCAAGTTCC 58.572 52.381 0.00 0.00 42.54 3.62
7702 9080 3.097877 GGCACTCAAGTTCCCAAAAAG 57.902 47.619 0.00 0.00 0.00 2.27
7703 9081 2.430694 GGCACTCAAGTTCCCAAAAAGT 59.569 45.455 0.00 0.00 0.00 2.66
7704 9082 3.634910 GGCACTCAAGTTCCCAAAAAGTA 59.365 43.478 0.00 0.00 0.00 2.24
7705 9083 4.499188 GGCACTCAAGTTCCCAAAAAGTAC 60.499 45.833 0.00 0.00 0.00 2.73
7706 9084 4.097286 GCACTCAAGTTCCCAAAAAGTACA 59.903 41.667 0.00 0.00 0.00 2.90
7707 9085 5.733373 GCACTCAAGTTCCCAAAAAGTACAG 60.733 44.000 0.00 0.00 0.00 2.74
7708 9086 5.588648 CACTCAAGTTCCCAAAAAGTACAGA 59.411 40.000 0.00 0.00 0.00 3.41
7709 9087 5.589050 ACTCAAGTTCCCAAAAAGTACAGAC 59.411 40.000 0.00 0.00 0.00 3.51
7710 9088 5.502079 TCAAGTTCCCAAAAAGTACAGACA 58.498 37.500 0.00 0.00 0.00 3.41
7711 9089 6.126409 TCAAGTTCCCAAAAAGTACAGACAT 58.874 36.000 0.00 0.00 0.00 3.06
7712 9090 6.262273 TCAAGTTCCCAAAAAGTACAGACATC 59.738 38.462 0.00 0.00 0.00 3.06
7713 9091 4.755123 AGTTCCCAAAAAGTACAGACATCG 59.245 41.667 0.00 0.00 0.00 3.84
7714 9092 4.345859 TCCCAAAAAGTACAGACATCGT 57.654 40.909 0.00 0.00 0.00 3.73
7715 9093 4.312443 TCCCAAAAAGTACAGACATCGTC 58.688 43.478 0.00 0.00 0.00 4.20
7716 9094 3.435671 CCCAAAAAGTACAGACATCGTCC 59.564 47.826 0.00 0.00 32.18 4.79
7717 9095 4.315803 CCAAAAAGTACAGACATCGTCCT 58.684 43.478 0.00 0.00 32.18 3.85
7718 9096 4.755123 CCAAAAAGTACAGACATCGTCCTT 59.245 41.667 0.00 0.00 32.18 3.36
7719 9097 5.107065 CCAAAAAGTACAGACATCGTCCTTC 60.107 44.000 0.00 0.00 32.18 3.46
7720 9098 4.866508 AAAGTACAGACATCGTCCTTCA 57.133 40.909 0.00 0.00 32.18 3.02
7721 9099 4.866508 AAGTACAGACATCGTCCTTCAA 57.133 40.909 0.00 0.00 32.18 2.69
7722 9100 4.175787 AGTACAGACATCGTCCTTCAAC 57.824 45.455 0.00 0.00 32.18 3.18
7723 9101 3.827302 AGTACAGACATCGTCCTTCAACT 59.173 43.478 0.00 0.00 32.18 3.16
7724 9102 3.753294 ACAGACATCGTCCTTCAACTT 57.247 42.857 0.00 0.00 32.18 2.66
7725 9103 4.073293 ACAGACATCGTCCTTCAACTTT 57.927 40.909 0.00 0.00 32.18 2.66
7726 9104 4.451900 ACAGACATCGTCCTTCAACTTTT 58.548 39.130 0.00 0.00 32.18 2.27
7727 9105 4.881850 ACAGACATCGTCCTTCAACTTTTT 59.118 37.500 0.00 0.00 32.18 1.94
7745 9123 4.823790 TTTTTGCTCTACTTTTCGTCCC 57.176 40.909 0.00 0.00 0.00 4.46
7746 9124 3.764237 TTTGCTCTACTTTTCGTCCCT 57.236 42.857 0.00 0.00 0.00 4.20
7747 9125 3.314541 TTGCTCTACTTTTCGTCCCTC 57.685 47.619 0.00 0.00 0.00 4.30
7748 9126 2.244695 TGCTCTACTTTTCGTCCCTCA 58.755 47.619 0.00 0.00 0.00 3.86
7749 9127 2.631062 TGCTCTACTTTTCGTCCCTCAA 59.369 45.455 0.00 0.00 0.00 3.02
7750 9128 3.254892 GCTCTACTTTTCGTCCCTCAAG 58.745 50.000 0.00 0.00 0.00 3.02
7751 9129 3.306156 GCTCTACTTTTCGTCCCTCAAGT 60.306 47.826 0.00 0.00 33.95 3.16
7752 9130 4.799917 GCTCTACTTTTCGTCCCTCAAGTT 60.800 45.833 0.00 0.00 31.83 2.66
7753 9131 5.286267 TCTACTTTTCGTCCCTCAAGTTT 57.714 39.130 0.00 0.00 31.83 2.66
7754 9132 5.295152 TCTACTTTTCGTCCCTCAAGTTTC 58.705 41.667 0.00 0.00 31.83 2.78
7755 9133 3.881220 ACTTTTCGTCCCTCAAGTTTCA 58.119 40.909 0.00 0.00 0.00 2.69
7756 9134 4.266714 ACTTTTCGTCCCTCAAGTTTCAA 58.733 39.130 0.00 0.00 0.00 2.69
7757 9135 4.703093 ACTTTTCGTCCCTCAAGTTTCAAA 59.297 37.500 0.00 0.00 0.00 2.69
7758 9136 5.184287 ACTTTTCGTCCCTCAAGTTTCAAAA 59.816 36.000 0.00 0.00 0.00 2.44
7759 9137 4.625972 TTCGTCCCTCAAGTTTCAAAAC 57.374 40.909 0.00 0.00 39.17 2.43
7760 9138 2.946990 TCGTCCCTCAAGTTTCAAAACC 59.053 45.455 2.08 0.00 39.71 3.27
7761 9139 2.286772 CGTCCCTCAAGTTTCAAAACCG 60.287 50.000 2.08 0.00 39.71 4.44
7762 9140 2.034179 GTCCCTCAAGTTTCAAAACCGG 59.966 50.000 0.00 0.00 39.71 5.28
7763 9141 2.028876 CCCTCAAGTTTCAAAACCGGT 58.971 47.619 0.00 0.00 39.71 5.28
7764 9142 2.034179 CCCTCAAGTTTCAAAACCGGTC 59.966 50.000 8.04 0.00 39.71 4.79
7765 9143 2.685897 CCTCAAGTTTCAAAACCGGTCA 59.314 45.455 8.04 0.00 39.71 4.02
7766 9144 3.129638 CCTCAAGTTTCAAAACCGGTCAA 59.870 43.478 8.04 0.00 39.71 3.18
7767 9145 4.351192 CTCAAGTTTCAAAACCGGTCAAG 58.649 43.478 8.04 0.00 39.71 3.02
7768 9146 3.759618 TCAAGTTTCAAAACCGGTCAAGT 59.240 39.130 8.04 0.00 39.71 3.16
7769 9147 4.218852 TCAAGTTTCAAAACCGGTCAAGTT 59.781 37.500 8.04 0.00 39.71 2.66
7770 9148 4.794278 AGTTTCAAAACCGGTCAAGTTT 57.206 36.364 8.04 0.80 39.71 2.66
7771 9149 5.142061 AGTTTCAAAACCGGTCAAGTTTT 57.858 34.783 8.04 0.34 45.78 2.43
7776 9154 3.775661 AAACCGGTCAAGTTTTGTCTG 57.224 42.857 8.04 0.00 33.73 3.51
7777 9155 2.702592 ACCGGTCAAGTTTTGTCTGA 57.297 45.000 0.00 0.00 0.00 3.27
7778 9156 2.993937 ACCGGTCAAGTTTTGTCTGAA 58.006 42.857 0.00 0.00 0.00 3.02
7779 9157 3.551846 ACCGGTCAAGTTTTGTCTGAAT 58.448 40.909 0.00 0.00 0.00 2.57
7780 9158 3.951680 ACCGGTCAAGTTTTGTCTGAATT 59.048 39.130 0.00 0.00 0.00 2.17
7781 9159 4.036380 ACCGGTCAAGTTTTGTCTGAATTC 59.964 41.667 0.00 0.00 0.00 2.17
7782 9160 4.537015 CGGTCAAGTTTTGTCTGAATTCC 58.463 43.478 2.27 0.00 0.00 3.01
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
67 68 7.439655 CCACGGGAAAATCTTGAAATTTTGTTA 59.560 33.333 0.00 0.00 38.59 2.41
70 71 5.757808 ACCACGGGAAAATCTTGAAATTTTG 59.242 36.000 0.00 0.00 38.59 2.44
71 72 5.924356 ACCACGGGAAAATCTTGAAATTTT 58.076 33.333 0.00 0.00 40.60 1.82
78 79 2.160813 CGGTAACCACGGGAAAATCTTG 59.839 50.000 0.00 0.00 0.00 3.02
79 80 2.038820 TCGGTAACCACGGGAAAATCTT 59.961 45.455 0.00 0.00 0.00 2.40
81 82 2.004733 CTCGGTAACCACGGGAAAATC 58.995 52.381 0.00 0.00 32.46 2.17
82 83 1.348696 ACTCGGTAACCACGGGAAAAT 59.651 47.619 0.00 0.00 35.39 1.82
83 84 0.758123 ACTCGGTAACCACGGGAAAA 59.242 50.000 0.00 0.00 35.39 2.29
99 100 1.553704 ACCAGGGGTGTCGAAATACTC 59.446 52.381 0.00 0.00 32.98 2.59
100 101 1.652947 ACCAGGGGTGTCGAAATACT 58.347 50.000 0.00 0.00 32.98 2.12
101 102 3.615224 TTACCAGGGGTGTCGAAATAC 57.385 47.619 0.00 0.00 36.19 1.89
102 103 4.384427 GGATTTACCAGGGGTGTCGAAATA 60.384 45.833 0.00 0.00 36.19 1.40
103 104 3.617284 GATTTACCAGGGGTGTCGAAAT 58.383 45.455 0.00 0.00 36.19 2.17
106 107 0.906775 GGATTTACCAGGGGTGTCGA 59.093 55.000 0.00 0.00 36.19 4.20
107 108 0.107361 GGGATTTACCAGGGGTGTCG 60.107 60.000 0.00 0.00 41.20 4.35
109 110 0.478789 TGGGGATTTACCAGGGGTGT 60.479 55.000 0.00 0.00 41.20 4.16
110 111 0.933700 ATGGGGATTTACCAGGGGTG 59.066 55.000 0.00 0.00 42.15 4.61
111 112 2.141067 GTATGGGGATTTACCAGGGGT 58.859 52.381 0.00 0.00 42.15 4.95
116 118 1.418637 GCTCGGTATGGGGATTTACCA 59.581 52.381 0.00 0.00 43.22 3.25
125 176 3.551846 AGGTATTTTTGCTCGGTATGGG 58.448 45.455 0.00 0.00 0.00 4.00
147 198 9.271738 GCGTTTGAATTCAAAATTTTCAAAAGA 57.728 25.926 30.07 5.81 45.61 2.52
148 199 8.522661 GGCGTTTGAATTCAAAATTTTCAAAAG 58.477 29.630 30.07 16.95 45.61 2.27
164 216 1.078708 ACCGATCGGGCGTTTGAAT 60.079 52.632 35.87 10.74 40.62 2.57
167 219 3.496131 CCACCGATCGGGCGTTTG 61.496 66.667 35.87 24.09 40.62 2.93
174 226 2.029666 GATCCAGCCACCGATCGG 59.970 66.667 32.20 32.20 42.03 4.18
200 252 2.847366 TTTTGCTCGGTATGGGCCCC 62.847 60.000 22.27 2.97 0.00 5.80
201 253 0.968393 TTTTTGCTCGGTATGGGCCC 60.968 55.000 17.59 17.59 0.00 5.80
202 254 1.111277 ATTTTTGCTCGGTATGGGCC 58.889 50.000 0.00 0.00 0.00 5.80
203 255 2.949644 AGTATTTTTGCTCGGTATGGGC 59.050 45.455 0.00 0.00 0.00 5.36
209 261 1.677820 CGGGGAGTATTTTTGCTCGGT 60.678 52.381 0.00 0.00 32.83 4.69
211 263 1.664151 GTCGGGGAGTATTTTTGCTCG 59.336 52.381 0.00 0.00 32.83 5.03
215 267 1.743394 GGCAGTCGGGGAGTATTTTTG 59.257 52.381 0.00 0.00 0.00 2.44
221 273 3.369410 ATCGGGCAGTCGGGGAGTA 62.369 63.158 0.00 0.00 0.00 2.59
223 275 3.917760 GATCGGGCAGTCGGGGAG 61.918 72.222 0.00 0.00 0.00 4.30
259 389 2.954989 CCCTACCTACTTTACTCGGTCC 59.045 54.545 0.00 0.00 0.00 4.46
280 410 9.281371 ACCAACTCCTGTAAAAATACTTAAGAC 57.719 33.333 10.09 0.00 0.00 3.01
283 413 9.856162 AGAACCAACTCCTGTAAAAATACTTAA 57.144 29.630 0.00 0.00 0.00 1.85
290 420 6.540914 CACACTAGAACCAACTCCTGTAAAAA 59.459 38.462 0.00 0.00 0.00 1.94
344 474 1.341187 ACCGGAGACCTCTCTCGAAAT 60.341 52.381 9.46 0.00 43.73 2.17
362 492 1.725164 GAATGAACGGACACTCGAACC 59.275 52.381 0.00 0.00 0.00 3.62
365 495 1.668919 GCTGAATGAACGGACACTCGA 60.669 52.381 0.00 0.00 0.00 4.04
373 503 5.551760 AAAATACAGAGCTGAATGAACGG 57.448 39.130 4.21 0.00 0.00 4.44
422 552 9.231297 TCGACTTCTGGATCTTTTTATTTTCAT 57.769 29.630 0.00 0.00 0.00 2.57
423 553 8.615878 TCGACTTCTGGATCTTTTTATTTTCA 57.384 30.769 0.00 0.00 0.00 2.69
424 554 9.331106 GTTCGACTTCTGGATCTTTTTATTTTC 57.669 33.333 0.00 0.00 0.00 2.29
471 646 3.007398 AGCTCAGTAGAACTTTGTCCCTG 59.993 47.826 0.00 0.00 0.00 4.45
474 649 3.006967 TCCAGCTCAGTAGAACTTTGTCC 59.993 47.826 0.00 0.00 0.00 4.02
485 660 1.472878 GTCGTGTCATCCAGCTCAGTA 59.527 52.381 0.00 0.00 0.00 2.74
487 662 0.244721 TGTCGTGTCATCCAGCTCAG 59.755 55.000 0.00 0.00 0.00 3.35
496 671 2.257371 CGGTCCGTGTCGTGTCAT 59.743 61.111 2.08 0.00 0.00 3.06
497 672 4.634133 GCGGTCCGTGTCGTGTCA 62.634 66.667 13.94 0.00 0.00 3.58
508 683 2.820767 CTTCTGTCTCCACGCGGTCC 62.821 65.000 12.47 0.00 0.00 4.46
516 691 2.169352 GCCTATCTTGCTTCTGTCTCCA 59.831 50.000 0.00 0.00 0.00 3.86
536 711 2.810887 TCGTCGCTGCTGTCATGC 60.811 61.111 0.00 0.00 0.00 4.06
546 721 2.983930 GCTCAGAGGTGTCGTCGCT 61.984 63.158 0.00 0.00 0.00 4.93
550 725 2.936912 GCCAGCTCAGAGGTGTCGT 61.937 63.158 24.73 0.00 41.84 4.34
551 726 2.125753 GCCAGCTCAGAGGTGTCG 60.126 66.667 24.73 13.64 41.84 4.35
552 727 2.125753 CGCCAGCTCAGAGGTGTC 60.126 66.667 24.73 14.04 41.84 3.67
553 728 4.385405 GCGCCAGCTCAGAGGTGT 62.385 66.667 24.73 0.00 41.84 4.16
593 773 2.761195 GCGGTCCTTTTCGGCATCC 61.761 63.158 0.00 0.00 0.00 3.51
596 776 2.975799 GTGCGGTCCTTTTCGGCA 60.976 61.111 0.00 0.00 38.44 5.69
667 858 3.389329 TGGTTGGTATGGCATTGTGTTTT 59.611 39.130 4.78 0.00 0.00 2.43
670 861 2.300956 TGGTTGGTATGGCATTGTGT 57.699 45.000 4.78 0.00 0.00 3.72
671 862 6.040278 TGTTATATGGTTGGTATGGCATTGTG 59.960 38.462 4.78 0.00 0.00 3.33
745 949 5.865552 CCATGCAATTTTCTAGTGTTTCCTG 59.134 40.000 0.00 0.00 0.00 3.86
755 959 7.563020 TCCATTTAATGCCATGCAATTTTCTA 58.437 30.769 0.00 0.00 43.62 2.10
757 961 6.680874 TCCATTTAATGCCATGCAATTTTC 57.319 33.333 0.00 0.00 43.62 2.29
804 1011 1.684248 CCTCCTTCCTTCATGCCCAAG 60.684 57.143 0.00 0.00 0.00 3.61
825 1032 0.182775 CCAAAATACCCCTCCCCTCG 59.817 60.000 0.00 0.00 0.00 4.63
837 1044 3.504520 GCTCCGTCCAAAAGACCAAAATA 59.495 43.478 0.00 0.00 43.08 1.40
866 1073 7.130269 CGTCTCGTTTGTTTATTCTTTTTCCT 58.870 34.615 0.00 0.00 0.00 3.36
867 1074 6.358822 CCGTCTCGTTTGTTTATTCTTTTTCC 59.641 38.462 0.00 0.00 0.00 3.13
868 1075 6.358822 CCCGTCTCGTTTGTTTATTCTTTTTC 59.641 38.462 0.00 0.00 0.00 2.29
869 1076 6.203647 CCCGTCTCGTTTGTTTATTCTTTTT 58.796 36.000 0.00 0.00 0.00 1.94
895 1102 1.734388 GAGCGAGGAAGGAGAGGAGC 61.734 65.000 0.00 0.00 0.00 4.70
922 1131 1.749033 GATGGATCGGGGTGGAGTC 59.251 63.158 0.00 0.00 0.00 3.36
923 1132 1.766461 GGATGGATCGGGGTGGAGT 60.766 63.158 0.00 0.00 0.00 3.85
925 1134 0.916845 TTTGGATGGATCGGGGTGGA 60.917 55.000 0.00 0.00 0.00 4.02
926 1135 0.751643 GTTTGGATGGATCGGGGTGG 60.752 60.000 0.00 0.00 0.00 4.61
928 1137 1.613061 GGTTTGGATGGATCGGGGT 59.387 57.895 0.00 0.00 0.00 4.95
930 1139 1.072331 CTAGGGTTTGGATGGATCGGG 59.928 57.143 0.00 0.00 0.00 5.14
931 1140 1.543429 GCTAGGGTTTGGATGGATCGG 60.543 57.143 0.00 0.00 0.00 4.18
932 1141 1.873903 CGCTAGGGTTTGGATGGATCG 60.874 57.143 0.00 0.00 0.00 3.69
933 1142 1.543429 CCGCTAGGGTTTGGATGGATC 60.543 57.143 6.02 0.00 0.00 3.36
1110 1329 2.158959 CGCCGTGATCTCCGACAAC 61.159 63.158 6.89 0.00 0.00 3.32
1111 1330 2.180769 CGCCGTGATCTCCGACAA 59.819 61.111 6.89 0.00 0.00 3.18
1113 1332 2.278013 GACGCCGTGATCTCCGAC 60.278 66.667 0.00 0.00 0.00 4.79
1344 1569 4.479993 GGCAGCACCTCCGCATCT 62.480 66.667 0.00 0.00 34.51 2.90
1408 1666 3.391665 CTTGGCTGGCTACGAGGGG 62.392 68.421 2.00 0.00 0.00 4.79
1457 1730 1.358830 ATCCAGGGGAGCATCTTGGG 61.359 60.000 3.16 0.00 34.05 4.12
1500 1785 4.498520 ATCTCGGCAGCGTCGTGG 62.499 66.667 2.79 0.00 30.45 4.94
1501 1786 3.250323 CATCTCGGCAGCGTCGTG 61.250 66.667 2.79 1.13 30.45 4.35
1503 1788 4.862092 AGCATCTCGGCAGCGTCG 62.862 66.667 0.00 0.00 35.83 5.12
1504 1789 3.260483 CAGCATCTCGGCAGCGTC 61.260 66.667 0.00 0.00 35.83 5.19
1511 1796 4.598894 CCTCGGGCAGCATCTCGG 62.599 72.222 0.00 0.00 0.00 4.63
1512 1797 3.781770 GACCTCGGGCAGCATCTCG 62.782 68.421 0.00 0.00 0.00 4.04
1513 1798 2.107953 GACCTCGGGCAGCATCTC 59.892 66.667 0.00 0.00 0.00 2.75
1514 1799 2.685017 TGACCTCGGGCAGCATCT 60.685 61.111 0.00 0.00 0.00 2.90
1515 1800 2.202987 CTGACCTCGGGCAGCATC 60.203 66.667 5.76 0.00 0.00 3.91
1516 1801 4.479993 GCTGACCTCGGGCAGCAT 62.480 66.667 33.22 0.00 45.27 3.79
1521 1806 4.329545 TTGTGGCTGACCTCGGGC 62.330 66.667 0.68 0.68 46.78 6.13
1522 1807 2.358737 GTTGTGGCTGACCTCGGG 60.359 66.667 0.00 0.00 36.63 5.14
1523 1808 2.738521 CGTTGTGGCTGACCTCGG 60.739 66.667 0.00 0.00 36.63 4.63
1524 1809 3.414700 GCGTTGTGGCTGACCTCG 61.415 66.667 0.00 0.00 36.63 4.63
1525 1810 2.031163 AGCGTTGTGGCTGACCTC 59.969 61.111 0.00 0.00 42.86 3.85
1614 1899 2.033194 GGTAGCGTTGTGGCTGACC 61.033 63.158 0.00 0.00 44.50 4.02
1642 1927 2.515523 CATCTCGGCAGCCAAGGG 60.516 66.667 13.30 0.00 0.00 3.95
1666 2038 1.598130 GAGCGTTGTGGCTGACCTT 60.598 57.895 0.00 0.00 44.93 3.50
1727 2099 4.003788 CCTCGGGAGCGTTGTGGT 62.004 66.667 0.00 0.00 0.00 4.16
1848 2220 3.129502 GCATTGAGCTGCGCCTCA 61.130 61.111 11.71 11.71 39.94 3.86
1897 2269 2.828095 CATTGGCGCCCGGAATGA 60.828 61.111 25.99 4.19 30.03 2.57
1904 2276 1.378514 TTCTTCTCCATTGGCGCCC 60.379 57.895 26.77 6.44 0.00 6.13
1935 2307 2.275418 GCATTGGACCCATCCCGT 59.725 61.111 0.00 0.00 45.59 5.28
1936 2308 1.825191 CAGCATTGGACCCATCCCG 60.825 63.158 0.00 0.00 45.59 5.14
2005 2380 2.496341 CTCGCCGGCAGATTCAGA 59.504 61.111 28.98 12.64 0.00 3.27
2028 2403 1.532604 CGACTCCTGTGGCCTGTGTA 61.533 60.000 3.32 0.00 0.00 2.90
2036 2411 2.997315 TGGGCTCGACTCCTGTGG 60.997 66.667 1.60 0.00 0.00 4.17
2163 2538 2.126346 GCCAACGCATTGTCCAGC 60.126 61.111 0.00 0.00 33.60 4.85
2171 2546 1.153086 GGAGGATCAGCCAACGCAT 60.153 57.895 0.00 0.00 40.02 4.73
2230 2605 2.512515 GGCATCCTCAGCGTCCAC 60.513 66.667 0.00 0.00 0.00 4.02
2258 2633 3.657398 TGATGATCTTGGCAGTGGAAT 57.343 42.857 0.00 0.00 0.00 3.01
2439 2814 1.371183 CTCTTCAGGCACAACCGGA 59.629 57.895 9.46 0.00 46.52 5.14
2466 2841 1.893919 GAGGGGTCTCTGGTGTGCTC 61.894 65.000 0.00 0.00 37.07 4.26
2653 3028 1.942657 TGCTGACAGACAAGAAACTGC 59.057 47.619 6.65 0.00 37.61 4.40
2691 3066 0.106708 TGATAGGCTCGTGCAATCCC 59.893 55.000 12.07 0.00 41.91 3.85
2748 3123 6.774170 TGAATACTGATTACTCGGCTAACCTA 59.226 38.462 0.00 0.00 0.00 3.08
2749 3124 5.597182 TGAATACTGATTACTCGGCTAACCT 59.403 40.000 0.00 0.00 0.00 3.50
2970 3345 5.851720 TGCATTGAAAACTGAGGCAAATAA 58.148 33.333 0.00 0.00 0.00 1.40
3039 3415 2.353357 TTGAGCAGCAAGATATGGGG 57.647 50.000 0.00 0.00 31.55 4.96
3121 3497 9.480538 CTTGCAAACAACATTCATATTAATTGC 57.519 29.630 0.00 0.00 39.72 3.56
3165 3541 2.863704 GCAACCTGCAATCACACCTTTC 60.864 50.000 0.00 0.00 44.26 2.62
3206 3582 2.026822 ACCTTGGAGCCATCACACTTAG 60.027 50.000 0.00 0.00 0.00 2.18
3235 3611 7.161404 CCTATTTTTCCTTTTTGAAGGGAAGG 58.839 38.462 5.43 0.00 38.60 3.46
3247 3623 8.935614 AGTTAGCACTAACCTATTTTTCCTTT 57.064 30.769 15.24 0.00 44.79 3.11
3429 3807 4.170062 CGCAGCACATCCCGCAAG 62.170 66.667 0.00 0.00 0.00 4.01
3575 3953 4.748701 AGGAAACTACTACAACTCCCTGA 58.251 43.478 0.00 0.00 40.61 3.86
3576 3954 5.485209 AAGGAAACTACTACAACTCCCTG 57.515 43.478 0.00 0.00 42.68 4.45
3577 3955 5.368816 ACAAAGGAAACTACTACAACTCCCT 59.631 40.000 0.00 0.00 42.68 4.20
3601 3979 3.084039 CAGGAGACATAAGCAAAGGCAA 58.916 45.455 0.00 0.00 44.61 4.52
3622 4000 1.373570 GGTAGCTGACCTGCAACATC 58.626 55.000 0.00 0.00 45.89 3.06
3651 4029 2.899976 TCGCACAGAAACTGTTCTTCA 58.100 42.857 1.46 0.00 42.59 3.02
3690 4068 5.515008 GGAAGTAGGATCTTGAGGTTGGTTT 60.515 44.000 0.00 0.00 0.00 3.27
3767 4145 5.295950 ACATAAGAGCACATCTAGCACATC 58.704 41.667 0.00 0.00 37.23 3.06
3889 4267 2.113860 TCTGATAACAACAGCAGGGC 57.886 50.000 0.00 0.00 32.75 5.19
3892 4270 9.683069 AACTTAATTTTCTGATAACAACAGCAG 57.317 29.630 0.00 0.00 35.61 4.24
3893 4271 9.462174 CAACTTAATTTTCTGATAACAACAGCA 57.538 29.630 0.00 0.00 35.61 4.41
3894 4272 9.463443 ACAACTTAATTTTCTGATAACAACAGC 57.537 29.630 0.00 0.00 35.61 4.40
3898 4276 8.842280 ACGGACAACTTAATTTTCTGATAACAA 58.158 29.630 0.00 0.00 0.00 2.83
3922 4303 6.672362 ACAGTGTTGTCAGATAGCGGTACG 62.672 50.000 0.00 0.00 46.01 3.67
3926 4307 2.370281 ACAGTGTTGTCAGATAGCGG 57.630 50.000 0.00 0.00 29.46 5.52
3940 4321 5.443185 ACAGAACATGGAAATCAACAGTG 57.557 39.130 0.00 0.00 0.00 3.66
3949 4330 3.133721 CACCCCAAAACAGAACATGGAAA 59.866 43.478 0.00 0.00 34.82 3.13
4035 4541 7.982224 ACTTTGTTGTTACTTTTCCAGTACTC 58.018 34.615 0.00 0.00 37.74 2.59
4209 4715 3.230134 CTCCAAACCTTCCCATCAACAA 58.770 45.455 0.00 0.00 0.00 2.83
4220 4726 8.829373 AAATAATAGATCTTGCTCCAAACCTT 57.171 30.769 0.00 0.00 0.00 3.50
4373 4884 0.836400 AGCTTTGACGAGAAGGGGGA 60.836 55.000 0.00 0.00 0.00 4.81
4404 4915 4.085733 CCACAGGGACAAAAATGGATACA 58.914 43.478 0.00 0.00 46.10 2.29
4426 4938 8.924511 TGGATATTCCTCATAAAAGGTCAATC 57.075 34.615 0.00 0.00 37.46 2.67
4574 5089 6.051717 AGATGTTGTCATACCTGATAGCAAC 58.948 40.000 0.00 0.00 37.30 4.17
4639 5154 7.281999 TCCGACAATTGCATGTCTTTTGATATA 59.718 33.333 16.31 0.00 45.98 0.86
4675 5190 3.245519 CACATTCTCTGCACAGATCATCG 59.754 47.826 0.00 0.00 36.76 3.84
4908 5426 3.057526 GCAGTTATCACAAAACCACTCCC 60.058 47.826 0.00 0.00 0.00 4.30
5080 5598 5.238583 AGGACAAATAGTACTCACTTGCAC 58.761 41.667 0.00 0.00 36.33 4.57
5119 5637 4.336713 AGGAAAGAAAGAAAGTGACAGCAC 59.663 41.667 0.00 0.00 45.49 4.40
5135 5653 9.847224 ACAAAGTAGTCAGAAAATAAGGAAAGA 57.153 29.630 0.00 0.00 0.00 2.52
5181 5700 1.614903 CTGCACCAAGAAGATTTGCCA 59.385 47.619 0.00 0.00 31.94 4.92
5253 5772 0.924090 GCAGAAGGCGTACTTGATCG 59.076 55.000 0.00 0.00 40.21 3.69
5446 5965 8.400947 CACATAGAAACTTAAATGTGGAGATGG 58.599 37.037 7.52 0.00 43.43 3.51
5647 6175 9.869757 TCGTGTTTCTTTCTTATGATATCAAGA 57.130 29.630 9.99 6.26 0.00 3.02
5662 6190 5.638596 AACCTTTTGACTCGTGTTTCTTT 57.361 34.783 0.00 0.00 0.00 2.52
5668 6196 6.293955 CCATAATCAAACCTTTTGACTCGTGT 60.294 38.462 3.51 0.00 0.00 4.49
5689 6217 8.529476 CATCTGATCTCTGTATTGACATCCATA 58.471 37.037 0.00 0.00 34.24 2.74
5695 6223 4.406649 TGCCATCTGATCTCTGTATTGACA 59.593 41.667 0.00 0.00 0.00 3.58
5696 6224 4.953667 TGCCATCTGATCTCTGTATTGAC 58.046 43.478 0.00 0.00 0.00 3.18
5697 6225 5.619132 TTGCCATCTGATCTCTGTATTGA 57.381 39.130 0.00 0.00 0.00 2.57
5810 6338 7.549839 ACAAAATGCAGCATACAATACAAGAT 58.450 30.769 8.75 0.00 0.00 2.40
5819 6347 3.497640 GGCAAAACAAAATGCAGCATACA 59.502 39.130 8.75 0.00 44.32 2.29
5888 6418 2.031120 TGCAAGGAGAAAACAACCAGG 58.969 47.619 0.00 0.00 0.00 4.45
5942 6472 4.408276 TCTCAGGAATTAGATCCCTACCG 58.592 47.826 0.00 0.00 40.59 4.02
6012 7325 2.093106 AGCACGGTTCTACTCTAGGTG 58.907 52.381 0.00 0.00 0.00 4.00
6013 7326 2.510928 AGCACGGTTCTACTCTAGGT 57.489 50.000 0.00 0.00 0.00 3.08
6027 7340 5.567138 AAAGAGAAATCCCATTTAGCACG 57.433 39.130 0.00 0.00 31.47 5.34
6031 7344 8.353423 TGGAAGAAAAGAGAAATCCCATTTAG 57.647 34.615 0.00 0.00 31.47 1.85
6181 7495 4.470462 CAAGCAGAATTCAGTAACACTGC 58.530 43.478 8.44 0.00 45.54 4.40
6289 7605 3.054875 TCACCAGTCCTTGAAGATCCATG 60.055 47.826 0.00 0.00 0.00 3.66
6456 7780 6.015434 CACTTGGAAGTAGCCCTGTTTTTATT 60.015 38.462 0.00 0.00 37.08 1.40
6544 7868 2.751436 GCTTCGGCTTCATGGGCA 60.751 61.111 12.21 0.00 38.08 5.36
6556 7880 2.609427 TCTTCATCCAGATGGCTTCG 57.391 50.000 7.76 0.00 39.24 3.79
6608 7932 4.139183 TGCAAAACAAACAGCAACAAAC 57.861 36.364 0.00 0.00 33.48 2.93
6609 7933 3.812053 ACTGCAAAACAAACAGCAACAAA 59.188 34.783 0.00 0.00 36.44 2.83
6610 7934 3.397482 ACTGCAAAACAAACAGCAACAA 58.603 36.364 0.00 0.00 36.44 2.83
6611 7935 2.992543 GACTGCAAAACAAACAGCAACA 59.007 40.909 0.00 0.00 36.44 3.33
6612 7936 3.061161 CAGACTGCAAAACAAACAGCAAC 59.939 43.478 0.00 0.00 36.44 4.17
6613 7937 3.252400 CAGACTGCAAAACAAACAGCAA 58.748 40.909 0.00 0.00 36.44 3.91
6614 7938 2.878580 CAGACTGCAAAACAAACAGCA 58.121 42.857 0.00 0.00 34.72 4.41
6615 7939 1.589779 GCAGACTGCAAAACAAACAGC 59.410 47.619 22.62 0.00 44.26 4.40
6629 7953 7.333528 TCTCAACAAAACAAAATAGCAGACT 57.666 32.000 0.00 0.00 0.00 3.24
6645 7969 3.184628 ACTCCCTCCATCATCTCAACAA 58.815 45.455 0.00 0.00 0.00 2.83
6680 8004 0.603707 CCATCTGCACAACCAGTCGT 60.604 55.000 0.00 0.00 34.47 4.34
6681 8005 0.320683 TCCATCTGCACAACCAGTCG 60.321 55.000 0.00 0.00 34.47 4.18
6809 8138 6.166279 GTCCGATGAGCATATCTCCATTTTA 58.834 40.000 0.00 0.00 41.18 1.52
6810 8139 4.999950 GTCCGATGAGCATATCTCCATTTT 59.000 41.667 0.00 0.00 41.18 1.82
6811 8140 4.040829 TGTCCGATGAGCATATCTCCATTT 59.959 41.667 0.00 0.00 41.18 2.32
6830 8160 3.256631 AGCCTCAAATGACAAACATGTCC 59.743 43.478 0.00 0.00 39.39 4.02
6910 8240 7.939781 TCCCCCTCTTTTAGATTTGAAGTAAT 58.060 34.615 0.00 0.00 0.00 1.89
6916 8246 3.591527 TGCTCCCCCTCTTTTAGATTTGA 59.408 43.478 0.00 0.00 0.00 2.69
6934 8264 7.065085 TGTTTCTGCTATCTTTCTTGTATGCTC 59.935 37.037 0.00 0.00 0.00 4.26
6941 8271 5.385617 CGGTTGTTTCTGCTATCTTTCTTG 58.614 41.667 0.00 0.00 0.00 3.02
6952 8282 2.793278 ACATTTCCGGTTGTTTCTGC 57.207 45.000 0.00 0.00 0.00 4.26
6964 8294 3.826157 TCACCACAGGATCAAACATTTCC 59.174 43.478 0.00 0.00 0.00 3.13
6995 8325 0.622665 CCCTGTTCCAGCTTCTCCAT 59.377 55.000 0.00 0.00 0.00 3.41
7002 8332 2.759795 GCTTCCCCTGTTCCAGCT 59.240 61.111 0.00 0.00 0.00 4.24
7018 8348 0.391263 ATCCGGAAGAGAACAACCGC 60.391 55.000 9.01 0.00 43.37 5.68
7019 8349 2.094762 AATCCGGAAGAGAACAACCG 57.905 50.000 9.01 0.00 44.16 4.44
7020 8350 6.510879 AATAAAATCCGGAAGAGAACAACC 57.489 37.500 9.01 0.00 0.00 3.77
7023 8354 7.153217 GGAAAATAAAATCCGGAAGAGAACA 57.847 36.000 9.01 0.00 0.00 3.18
7041 8372 8.570488 CCCTACTAAAAGTACAAAACGGAAAAT 58.430 33.333 0.00 0.00 0.00 1.82
7046 8377 4.143052 CGCCCTACTAAAAGTACAAAACGG 60.143 45.833 0.00 0.00 0.00 4.44
7072 8403 3.200593 GACATGGCGGCTCAGCTG 61.201 66.667 7.63 7.63 38.08 4.24
7102 8433 4.083324 AGGCATGTACATCGAAAACAACAG 60.083 41.667 5.07 0.00 0.00 3.16
7105 8436 3.190327 CCAGGCATGTACATCGAAAACAA 59.810 43.478 5.07 0.00 0.00 2.83
7113 8445 1.153168 ACGGCCAGGCATGTACATC 60.153 57.895 15.19 1.16 0.00 3.06
7119 8451 2.513204 CTGAGACGGCCAGGCATG 60.513 66.667 15.19 7.65 0.00 4.06
7149 8481 2.752903 ACACCTATCGCCACAAAATTCC 59.247 45.455 0.00 0.00 0.00 3.01
7150 8482 3.438781 TCACACCTATCGCCACAAAATTC 59.561 43.478 0.00 0.00 0.00 2.17
7151 8483 3.417101 TCACACCTATCGCCACAAAATT 58.583 40.909 0.00 0.00 0.00 1.82
7152 8484 3.066291 TCACACCTATCGCCACAAAAT 57.934 42.857 0.00 0.00 0.00 1.82
7153 8485 2.552599 TCACACCTATCGCCACAAAA 57.447 45.000 0.00 0.00 0.00 2.44
7154 8486 2.290008 ACATCACACCTATCGCCACAAA 60.290 45.455 0.00 0.00 0.00 2.83
7155 8487 1.277842 ACATCACACCTATCGCCACAA 59.722 47.619 0.00 0.00 0.00 3.33
7156 8488 0.901827 ACATCACACCTATCGCCACA 59.098 50.000 0.00 0.00 0.00 4.17
7157 8489 1.665679 CAACATCACACCTATCGCCAC 59.334 52.381 0.00 0.00 0.00 5.01
7158 8490 1.277842 ACAACATCACACCTATCGCCA 59.722 47.619 0.00 0.00 0.00 5.69
7159 8491 1.933853 GACAACATCACACCTATCGCC 59.066 52.381 0.00 0.00 0.00 5.54
7160 8492 2.604914 CAGACAACATCACACCTATCGC 59.395 50.000 0.00 0.00 0.00 4.58
7161 8493 3.849911 ACAGACAACATCACACCTATCG 58.150 45.455 0.00 0.00 0.00 2.92
7162 8494 4.393062 CCAACAGACAACATCACACCTATC 59.607 45.833 0.00 0.00 0.00 2.08
7163 8495 4.326826 CCAACAGACAACATCACACCTAT 58.673 43.478 0.00 0.00 0.00 2.57
7164 8496 3.495983 CCCAACAGACAACATCACACCTA 60.496 47.826 0.00 0.00 0.00 3.08
7168 8500 2.687425 CAACCCAACAGACAACATCACA 59.313 45.455 0.00 0.00 0.00 3.58
7170 8502 2.305928 CCAACCCAACAGACAACATCA 58.694 47.619 0.00 0.00 0.00 3.07
7190 8522 3.616317 CGGATCAAAATTTCAACCACCCC 60.616 47.826 0.00 0.00 0.00 4.95
7191 8523 3.006430 ACGGATCAAAATTTCAACCACCC 59.994 43.478 0.00 0.00 0.00 4.61
7211 8543 2.635443 GCCACCCCACCAATGAACG 61.635 63.158 0.00 0.00 0.00 3.95
7247 8579 3.948473 TCAAAATTCGACAACCAGACCAA 59.052 39.130 0.00 0.00 0.00 3.67
7248 8580 3.546724 TCAAAATTCGACAACCAGACCA 58.453 40.909 0.00 0.00 0.00 4.02
7288 8631 3.875571 ACCAATTTATCCAAACCCCCAA 58.124 40.909 0.00 0.00 0.00 4.12
7290 8633 4.042311 ACAAACCAATTTATCCAAACCCCC 59.958 41.667 0.00 0.00 0.00 5.40
7295 8638 6.543831 CCAACCAACAAACCAATTTATCCAAA 59.456 34.615 0.00 0.00 0.00 3.28
7311 8654 3.202595 AGGTAAGGTACAACCAACCAACA 59.797 43.478 17.78 0.00 44.48 3.33
7312 8655 3.566742 CAGGTAAGGTACAACCAACCAAC 59.433 47.826 17.78 3.06 44.48 3.77
7313 8656 3.458857 TCAGGTAAGGTACAACCAACCAA 59.541 43.478 17.78 7.22 44.48 3.67
7314 8657 3.047115 TCAGGTAAGGTACAACCAACCA 58.953 45.455 17.78 1.79 44.48 3.67
7315 8658 3.775261 TCAGGTAAGGTACAACCAACC 57.225 47.619 12.27 10.95 43.20 3.77
7316 8659 4.007659 CCATCAGGTAAGGTACAACCAAC 58.992 47.826 12.27 0.00 41.95 3.77
7320 8663 7.441458 GTGATAATCCATCAGGTAAGGTACAAC 59.559 40.741 0.00 0.00 44.42 3.32
7341 8684 8.602424 TCAGAAGGTAAAATTCTCAAGGTGATA 58.398 33.333 0.00 0.00 34.80 2.15
7344 8687 6.712547 AGTCAGAAGGTAAAATTCTCAAGGTG 59.287 38.462 0.00 0.00 34.80 4.00
7354 8697 6.600822 CCATCACATGAGTCAGAAGGTAAAAT 59.399 38.462 0.00 0.00 0.00 1.82
7364 8716 3.311871 GCTAAAGCCATCACATGAGTCAG 59.688 47.826 0.00 0.00 34.31 3.51
7440 8817 5.944013 TGGCATGCATTCATTTTGAAATTG 58.056 33.333 21.36 0.00 40.12 2.32
7441 8818 6.767524 ATGGCATGCATTCATTTTGAAATT 57.232 29.167 21.36 0.00 40.12 1.82
7443 8820 7.867305 AATATGGCATGCATTCATTTTGAAA 57.133 28.000 21.36 0.00 40.12 2.69
7446 8823 6.915300 CCAAAATATGGCATGCATTCATTTTG 59.085 34.615 29.18 29.18 43.80 2.44
7447 8824 7.033530 CCAAAATATGGCATGCATTCATTTT 57.966 32.000 21.36 19.32 43.80 1.82
7471 8848 6.074142 GGTTGAAGTCATGCATTCTCAAAAAC 60.074 38.462 0.00 0.00 0.00 2.43
7571 8949 6.729690 TCTCTCAAAACAATCCCAAACAAT 57.270 33.333 0.00 0.00 0.00 2.71
7572 8950 6.071108 TGTTCTCTCAAAACAATCCCAAACAA 60.071 34.615 0.00 0.00 33.86 2.83
7573 8951 5.420421 TGTTCTCTCAAAACAATCCCAAACA 59.580 36.000 0.00 0.00 33.86 2.83
7574 8952 5.901552 TGTTCTCTCAAAACAATCCCAAAC 58.098 37.500 0.00 0.00 33.86 2.93
7575 8953 6.323482 TGATGTTCTCTCAAAACAATCCCAAA 59.677 34.615 0.00 0.00 39.84 3.28
7576 8954 5.832595 TGATGTTCTCTCAAAACAATCCCAA 59.167 36.000 0.00 0.00 39.84 4.12
7577 8955 5.384336 TGATGTTCTCTCAAAACAATCCCA 58.616 37.500 0.00 0.00 39.84 4.37
7578 8956 5.964958 TGATGTTCTCTCAAAACAATCCC 57.035 39.130 0.00 0.00 39.84 3.85
7579 8957 7.025963 GTCATGATGTTCTCTCAAAACAATCC 58.974 38.462 0.00 0.00 39.84 3.01
7580 8958 7.814642 AGTCATGATGTTCTCTCAAAACAATC 58.185 34.615 0.00 0.00 39.84 2.67
7581 8959 7.756395 AGTCATGATGTTCTCTCAAAACAAT 57.244 32.000 0.00 0.00 39.84 2.71
7582 8960 7.067372 ACAAGTCATGATGTTCTCTCAAAACAA 59.933 33.333 0.00 0.00 39.84 2.83
7583 8961 6.543465 ACAAGTCATGATGTTCTCTCAAAACA 59.457 34.615 0.00 0.00 40.63 2.83
7584 8962 6.963796 ACAAGTCATGATGTTCTCTCAAAAC 58.036 36.000 0.00 0.00 0.00 2.43
7585 8963 7.282901 TCAACAAGTCATGATGTTCTCTCAAAA 59.717 33.333 10.99 0.00 37.66 2.44
7586 8964 6.767423 TCAACAAGTCATGATGTTCTCTCAAA 59.233 34.615 10.99 0.00 37.66 2.69
7587 8965 6.290605 TCAACAAGTCATGATGTTCTCTCAA 58.709 36.000 10.99 0.00 37.66 3.02
7588 8966 5.857268 TCAACAAGTCATGATGTTCTCTCA 58.143 37.500 10.99 0.00 37.66 3.27
7589 8967 6.981762 ATCAACAAGTCATGATGTTCTCTC 57.018 37.500 10.99 0.00 37.66 3.20
7590 8968 7.551974 CCTAATCAACAAGTCATGATGTTCTCT 59.448 37.037 10.99 2.91 37.66 3.10
7591 8969 7.550551 TCCTAATCAACAAGTCATGATGTTCTC 59.449 37.037 10.99 0.00 37.66 2.87
7592 8970 7.397221 TCCTAATCAACAAGTCATGATGTTCT 58.603 34.615 10.99 3.48 37.66 3.01
7593 8971 7.615582 TCCTAATCAACAAGTCATGATGTTC 57.384 36.000 10.99 0.00 37.66 3.18
7594 8972 8.585471 ATTCCTAATCAACAAGTCATGATGTT 57.415 30.769 8.57 8.57 40.24 2.71
7595 8973 8.585471 AATTCCTAATCAACAAGTCATGATGT 57.415 30.769 0.00 0.00 36.44 3.06
7605 8983 9.627123 CCACCTAAGATAATTCCTAATCAACAA 57.373 33.333 0.00 0.00 0.00 2.83
7606 8984 8.217799 CCCACCTAAGATAATTCCTAATCAACA 58.782 37.037 0.00 0.00 0.00 3.33
7607 8985 7.665974 CCCCACCTAAGATAATTCCTAATCAAC 59.334 40.741 0.00 0.00 0.00 3.18
7608 8986 7.202279 CCCCCACCTAAGATAATTCCTAATCAA 60.202 40.741 0.00 0.00 0.00 2.57
7609 8987 6.274672 CCCCCACCTAAGATAATTCCTAATCA 59.725 42.308 0.00 0.00 0.00 2.57
7610 8988 6.274908 ACCCCCACCTAAGATAATTCCTAATC 59.725 42.308 0.00 0.00 0.00 1.75
7611 8989 6.045577 CACCCCCACCTAAGATAATTCCTAAT 59.954 42.308 0.00 0.00 0.00 1.73
7612 8990 5.371472 CACCCCCACCTAAGATAATTCCTAA 59.629 44.000 0.00 0.00 0.00 2.69
7613 8991 4.911522 CACCCCCACCTAAGATAATTCCTA 59.088 45.833 0.00 0.00 0.00 2.94
7614 8992 3.722101 CACCCCCACCTAAGATAATTCCT 59.278 47.826 0.00 0.00 0.00 3.36
7615 8993 3.181433 CCACCCCCACCTAAGATAATTCC 60.181 52.174 0.00 0.00 0.00 3.01
7616 8994 3.181433 CCCACCCCCACCTAAGATAATTC 60.181 52.174 0.00 0.00 0.00 2.17
7617 8995 2.789399 CCCACCCCCACCTAAGATAATT 59.211 50.000 0.00 0.00 0.00 1.40
7618 8996 2.428901 CCCACCCCCACCTAAGATAAT 58.571 52.381 0.00 0.00 0.00 1.28
7619 8997 1.901648 CCCACCCCCACCTAAGATAA 58.098 55.000 0.00 0.00 0.00 1.75
7620 8998 0.696485 GCCCACCCCCACCTAAGATA 60.696 60.000 0.00 0.00 0.00 1.98
7621 8999 2.006991 GCCCACCCCCACCTAAGAT 61.007 63.158 0.00 0.00 0.00 2.40
7622 9000 2.612746 GCCCACCCCCACCTAAGA 60.613 66.667 0.00 0.00 0.00 2.10
7623 9001 0.991355 TATGCCCACCCCCACCTAAG 60.991 60.000 0.00 0.00 0.00 2.18
7624 9002 0.552864 TTATGCCCACCCCCACCTAA 60.553 55.000 0.00 0.00 0.00 2.69
7625 9003 0.991355 CTTATGCCCACCCCCACCTA 60.991 60.000 0.00 0.00 0.00 3.08
7626 9004 2.204385 TTATGCCCACCCCCACCT 60.204 61.111 0.00 0.00 0.00 4.00
7627 9005 2.278738 CTTATGCCCACCCCCACC 59.721 66.667 0.00 0.00 0.00 4.61
7628 9006 2.278738 CCTTATGCCCACCCCCAC 59.721 66.667 0.00 0.00 0.00 4.61
7629 9007 3.026847 CCCTTATGCCCACCCCCA 61.027 66.667 0.00 0.00 0.00 4.96
7630 9008 2.698406 TCCCTTATGCCCACCCCC 60.698 66.667 0.00 0.00 0.00 5.40
7631 9009 2.006991 AGTCCCTTATGCCCACCCC 61.007 63.158 0.00 0.00 0.00 4.95
7632 9010 1.227383 CAGTCCCTTATGCCCACCC 59.773 63.158 0.00 0.00 0.00 4.61
7633 9011 1.453928 GCAGTCCCTTATGCCCACC 60.454 63.158 0.00 0.00 36.41 4.61
7634 9012 4.242602 GCAGTCCCTTATGCCCAC 57.757 61.111 0.00 0.00 36.41 4.61
7638 9016 0.817229 GCTGAGGCAGTCCCTTATGC 60.817 60.000 0.00 0.00 46.60 3.14
7639 9017 0.179034 GGCTGAGGCAGTCCCTTATG 60.179 60.000 0.00 0.00 46.60 1.90
7640 9018 2.225792 GGCTGAGGCAGTCCCTTAT 58.774 57.895 0.00 0.00 46.60 1.73
7641 9019 3.727387 GGCTGAGGCAGTCCCTTA 58.273 61.111 0.00 0.00 46.60 2.69
7646 9024 2.191641 GGATGGGCTGAGGCAGTC 59.808 66.667 8.68 4.84 40.87 3.51
7647 9025 3.415087 GGGATGGGCTGAGGCAGT 61.415 66.667 8.68 0.00 40.87 4.40
7648 9026 3.414193 TGGGATGGGCTGAGGCAG 61.414 66.667 8.68 0.00 40.87 4.85
7649 9027 3.731728 GTGGGATGGGCTGAGGCA 61.732 66.667 8.68 0.00 40.87 4.75
7650 9028 1.635817 TAAGTGGGATGGGCTGAGGC 61.636 60.000 0.00 0.00 37.82 4.70
7651 9029 0.918983 TTAAGTGGGATGGGCTGAGG 59.081 55.000 0.00 0.00 0.00 3.86
7652 9030 2.173356 TCATTAAGTGGGATGGGCTGAG 59.827 50.000 0.00 0.00 0.00 3.35
7653 9031 2.092429 GTCATTAAGTGGGATGGGCTGA 60.092 50.000 0.00 0.00 0.00 4.26
7654 9032 2.301346 GTCATTAAGTGGGATGGGCTG 58.699 52.381 0.00 0.00 0.00 4.85
7655 9033 1.215423 GGTCATTAAGTGGGATGGGCT 59.785 52.381 0.00 0.00 0.00 5.19
7656 9034 1.215423 AGGTCATTAAGTGGGATGGGC 59.785 52.381 0.00 0.00 0.00 5.36
7657 9035 3.669939 AAGGTCATTAAGTGGGATGGG 57.330 47.619 0.00 0.00 0.00 4.00
7658 9036 5.126067 CACTAAGGTCATTAAGTGGGATGG 58.874 45.833 0.00 0.00 0.00 3.51
7659 9037 5.126067 CCACTAAGGTCATTAAGTGGGATG 58.874 45.833 11.65 0.00 38.12 3.51
7660 9038 5.373812 CCACTAAGGTCATTAAGTGGGAT 57.626 43.478 11.65 0.00 38.12 3.85
7661 9039 4.837093 CCACTAAGGTCATTAAGTGGGA 57.163 45.455 11.65 0.00 38.12 4.37
7662 9040 3.886123 CCCACTAAGGTCATTAAGTGGG 58.114 50.000 21.45 21.45 45.74 4.61
7663 9041 3.279434 GCCCACTAAGGTCATTAAGTGG 58.721 50.000 12.39 12.39 39.67 4.00
7664 9042 3.689649 GTGCCCACTAAGGTCATTAAGTG 59.310 47.826 0.00 0.00 34.66 3.16
7665 9043 3.587506 AGTGCCCACTAAGGTCATTAAGT 59.412 43.478 0.00 0.00 40.43 2.24
7666 9044 4.192317 GAGTGCCCACTAAGGTCATTAAG 58.808 47.826 0.12 0.00 42.66 1.85
7667 9045 3.585289 TGAGTGCCCACTAAGGTCATTAA 59.415 43.478 0.12 0.00 42.66 1.40
7668 9046 3.178046 TGAGTGCCCACTAAGGTCATTA 58.822 45.455 0.12 0.00 42.66 1.90
7669 9047 1.985159 TGAGTGCCCACTAAGGTCATT 59.015 47.619 0.12 0.00 42.66 2.57
7670 9048 1.656587 TGAGTGCCCACTAAGGTCAT 58.343 50.000 0.12 0.00 42.66 3.06
7671 9049 1.347707 CTTGAGTGCCCACTAAGGTCA 59.652 52.381 0.12 0.00 42.66 4.02
7672 9050 1.348036 ACTTGAGTGCCCACTAAGGTC 59.652 52.381 0.12 0.00 42.66 3.85
7673 9051 1.435256 ACTTGAGTGCCCACTAAGGT 58.565 50.000 0.12 0.00 42.66 3.50
7674 9052 2.427506 GAACTTGAGTGCCCACTAAGG 58.572 52.381 0.12 0.00 42.66 2.69
7675 9053 2.427506 GGAACTTGAGTGCCCACTAAG 58.572 52.381 0.12 8.07 42.66 2.18
7676 9054 2.561478 GGAACTTGAGTGCCCACTAA 57.439 50.000 0.12 0.00 42.66 2.24
7682 9060 2.430694 ACTTTTTGGGAACTTGAGTGCC 59.569 45.455 0.00 0.00 43.36 5.01
7683 9061 3.801114 ACTTTTTGGGAACTTGAGTGC 57.199 42.857 0.00 0.00 0.00 4.40
7684 9062 5.588648 TCTGTACTTTTTGGGAACTTGAGTG 59.411 40.000 0.00 0.00 0.00 3.51
7685 9063 5.589050 GTCTGTACTTTTTGGGAACTTGAGT 59.411 40.000 0.00 0.00 0.00 3.41
7686 9064 5.588648 TGTCTGTACTTTTTGGGAACTTGAG 59.411 40.000 0.00 0.00 0.00 3.02
7687 9065 5.502079 TGTCTGTACTTTTTGGGAACTTGA 58.498 37.500 0.00 0.00 0.00 3.02
7688 9066 5.828299 TGTCTGTACTTTTTGGGAACTTG 57.172 39.130 0.00 0.00 0.00 3.16
7689 9067 5.238650 CGATGTCTGTACTTTTTGGGAACTT 59.761 40.000 0.00 0.00 0.00 2.66
7690 9068 4.755123 CGATGTCTGTACTTTTTGGGAACT 59.245 41.667 0.00 0.00 0.00 3.01
7691 9069 4.514066 ACGATGTCTGTACTTTTTGGGAAC 59.486 41.667 0.00 0.00 0.00 3.62
7692 9070 4.710324 ACGATGTCTGTACTTTTTGGGAA 58.290 39.130 0.00 0.00 0.00 3.97
7693 9071 4.312443 GACGATGTCTGTACTTTTTGGGA 58.688 43.478 0.00 0.00 0.00 4.37
7694 9072 3.435671 GGACGATGTCTGTACTTTTTGGG 59.564 47.826 0.00 0.00 32.47 4.12
7695 9073 4.315803 AGGACGATGTCTGTACTTTTTGG 58.684 43.478 0.00 0.00 32.47 3.28
7696 9074 5.465390 TGAAGGACGATGTCTGTACTTTTTG 59.535 40.000 0.00 0.00 40.57 2.44
7697 9075 5.607477 TGAAGGACGATGTCTGTACTTTTT 58.393 37.500 0.00 0.00 40.57 1.94
7698 9076 5.209818 TGAAGGACGATGTCTGTACTTTT 57.790 39.130 0.00 0.00 40.57 2.27
7699 9077 4.866508 TGAAGGACGATGTCTGTACTTT 57.133 40.909 0.00 0.00 40.57 2.66
7700 9078 4.281182 AGTTGAAGGACGATGTCTGTACTT 59.719 41.667 0.00 0.00 43.15 2.24
7701 9079 3.827302 AGTTGAAGGACGATGTCTGTACT 59.173 43.478 0.00 0.00 32.47 2.73
7702 9080 4.175787 AGTTGAAGGACGATGTCTGTAC 57.824 45.455 0.00 0.00 32.47 2.90
7703 9081 4.866508 AAGTTGAAGGACGATGTCTGTA 57.133 40.909 0.00 0.00 32.47 2.74
7704 9082 3.753294 AAGTTGAAGGACGATGTCTGT 57.247 42.857 0.00 0.00 32.47 3.41
7705 9083 5.424121 AAAAAGTTGAAGGACGATGTCTG 57.576 39.130 0.00 0.00 32.47 3.51
7724 9102 4.457466 AGGGACGAAAAGTAGAGCAAAAA 58.543 39.130 0.00 0.00 0.00 1.94
7725 9103 4.062991 GAGGGACGAAAAGTAGAGCAAAA 58.937 43.478 0.00 0.00 0.00 2.44
7726 9104 3.070446 TGAGGGACGAAAAGTAGAGCAAA 59.930 43.478 0.00 0.00 0.00 3.68
7727 9105 2.631062 TGAGGGACGAAAAGTAGAGCAA 59.369 45.455 0.00 0.00 0.00 3.91
7728 9106 2.244695 TGAGGGACGAAAAGTAGAGCA 58.755 47.619 0.00 0.00 0.00 4.26
7729 9107 3.254892 CTTGAGGGACGAAAAGTAGAGC 58.745 50.000 0.00 0.00 0.00 4.09
7730 9108 4.522722 ACTTGAGGGACGAAAAGTAGAG 57.477 45.455 0.00 0.00 31.26 2.43
7731 9109 4.950205 AACTTGAGGGACGAAAAGTAGA 57.050 40.909 0.00 0.00 32.69 2.59
7732 9110 5.054477 TGAAACTTGAGGGACGAAAAGTAG 58.946 41.667 0.00 0.00 32.69 2.57
7733 9111 5.026038 TGAAACTTGAGGGACGAAAAGTA 57.974 39.130 0.00 0.00 32.69 2.24
7734 9112 3.881220 TGAAACTTGAGGGACGAAAAGT 58.119 40.909 0.00 0.00 34.40 2.66
7735 9113 4.893424 TTGAAACTTGAGGGACGAAAAG 57.107 40.909 0.00 0.00 0.00 2.27
7736 9114 5.404096 GTTTTGAAACTTGAGGGACGAAAA 58.596 37.500 0.00 0.00 36.03 2.29
7737 9115 4.142337 GGTTTTGAAACTTGAGGGACGAAA 60.142 41.667 6.57 0.00 38.89 3.46
7738 9116 3.379057 GGTTTTGAAACTTGAGGGACGAA 59.621 43.478 6.57 0.00 38.89 3.85
7739 9117 2.946990 GGTTTTGAAACTTGAGGGACGA 59.053 45.455 6.57 0.00 38.89 4.20
7740 9118 2.286772 CGGTTTTGAAACTTGAGGGACG 60.287 50.000 6.57 0.00 38.89 4.79
7741 9119 2.034179 CCGGTTTTGAAACTTGAGGGAC 59.966 50.000 6.57 0.00 38.89 4.46
7742 9120 2.303175 CCGGTTTTGAAACTTGAGGGA 58.697 47.619 6.57 0.00 38.89 4.20
7743 9121 2.028876 ACCGGTTTTGAAACTTGAGGG 58.971 47.619 0.00 4.04 38.89 4.30
7744 9122 2.685897 TGACCGGTTTTGAAACTTGAGG 59.314 45.455 9.42 7.61 38.89 3.86
7745 9123 4.142469 ACTTGACCGGTTTTGAAACTTGAG 60.142 41.667 9.42 0.00 38.89 3.02
7746 9124 3.759618 ACTTGACCGGTTTTGAAACTTGA 59.240 39.130 9.42 0.00 38.89 3.02
7747 9125 4.104696 ACTTGACCGGTTTTGAAACTTG 57.895 40.909 9.42 0.00 38.89 3.16
7748 9126 4.794278 AACTTGACCGGTTTTGAAACTT 57.206 36.364 9.42 0.00 38.89 2.66
7749 9127 4.794278 AAACTTGACCGGTTTTGAAACT 57.206 36.364 9.42 0.00 38.89 2.66
7755 9133 3.759618 TCAGACAAAACTTGACCGGTTTT 59.240 39.130 9.42 1.48 44.45 2.43
7756 9134 3.349022 TCAGACAAAACTTGACCGGTTT 58.651 40.909 9.42 0.00 38.35 3.27
7757 9135 2.993937 TCAGACAAAACTTGACCGGTT 58.006 42.857 9.42 0.00 0.00 4.44
7758 9136 2.702592 TCAGACAAAACTTGACCGGT 57.297 45.000 6.92 6.92 0.00 5.28
7759 9137 4.537015 GAATTCAGACAAAACTTGACCGG 58.463 43.478 0.00 0.00 0.00 5.28
7760 9138 4.537015 GGAATTCAGACAAAACTTGACCG 58.463 43.478 7.93 0.00 0.00 4.79


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.