Multiple sequence alignment - TraesCS4A01G495900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G495900 chr4A 100.000 3732 0 0 1 3732 742587667 742583936 0.000000e+00 6892.0
1 TraesCS4A01G495900 chr4A 88.927 1454 140 13 1123 2559 675526381 675524932 0.000000e+00 1773.0
2 TraesCS4A01G495900 chr4A 87.930 1425 155 13 1134 2553 697970060 697971472 0.000000e+00 1663.0
3 TraesCS4A01G495900 chr4A 82.904 427 60 9 174 590 432530658 432531081 4.550000e-99 372.0
4 TraesCS4A01G495900 chr7D 89.093 2338 124 50 290 2559 2000844 1998570 0.000000e+00 2784.0
5 TraesCS4A01G495900 chr7D 88.593 1429 151 7 1134 2559 30761248 30759829 0.000000e+00 1725.0
6 TraesCS4A01G495900 chr7D 79.267 1418 237 37 1144 2516 625615354 625616759 0.000000e+00 937.0
7 TraesCS4A01G495900 chr7D 80.924 498 65 19 111 590 164641585 164642070 2.120000e-97 366.0
8 TraesCS4A01G495900 chr7A 90.815 1644 97 21 930 2554 1690616 1692224 0.000000e+00 2150.0
9 TraesCS4A01G495900 chr7A 88.842 1407 132 18 1134 2516 63060447 63059042 0.000000e+00 1705.0
10 TraesCS4A01G495900 chr7A 89.062 64 6 1 764 826 1690227 1690290 1.110000e-10 78.7
11 TraesCS4A01G495900 chr1A 99.886 878 0 1 2566 3442 278663837 278664714 0.000000e+00 1615.0
12 TraesCS4A01G495900 chr3B 99.659 879 1 2 2566 3442 187357713 187356835 0.000000e+00 1605.0
13 TraesCS4A01G495900 chr3B 99.094 883 1 2 2567 3442 27503889 27504771 0.000000e+00 1580.0
14 TraesCS4A01G495900 chr3B 98.938 659 6 1 2565 3222 747723082 747722424 0.000000e+00 1177.0
15 TraesCS4A01G495900 chr6B 99.658 878 2 1 2566 3442 704104637 704103760 0.000000e+00 1604.0
16 TraesCS4A01G495900 chr5A 99.658 878 2 1 2566 3442 10557669 10558546 0.000000e+00 1604.0
17 TraesCS4A01G495900 chr5A 99.095 884 1 2 2566 3442 38824626 38823743 0.000000e+00 1581.0
18 TraesCS4A01G495900 chr4B 98.774 897 4 2 2559 3448 583064458 583065354 0.000000e+00 1589.0
19 TraesCS4A01G495900 chr4B 85.185 108 16 0 598 705 101712481 101712588 1.100000e-20 111.0
20 TraesCS4A01G495900 chr2B 99.096 885 1 2 2566 3443 72756613 72755729 0.000000e+00 1583.0
21 TraesCS4A01G495900 chr6A 99.095 884 1 2 2566 3442 46767138 46768021 0.000000e+00 1581.0
22 TraesCS4A01G495900 chr6A 81.223 458 72 10 135 582 183225909 183225456 1.270000e-94 357.0
23 TraesCS4A01G495900 chr6A 82.313 147 26 0 582 728 452304577 452304723 1.090000e-25 128.0
24 TraesCS4A01G495900 chr6A 96.970 33 0 1 3673 3704 597244384 597244416 2.000000e-03 54.7
25 TraesCS4A01G495900 chr7B 77.948 1433 250 42 1144 2524 682374163 682372745 0.000000e+00 835.0
26 TraesCS4A01G495900 chr4D 79.425 661 87 27 139 756 449386187 449386841 4.460000e-114 422.0
27 TraesCS4A01G495900 chr4D 81.416 113 18 3 597 706 8402060 8401948 5.130000e-14 89.8
28 TraesCS4A01G495900 chr4D 94.595 37 0 2 3673 3707 87365407 87365443 5.210000e-04 56.5
29 TraesCS4A01G495900 chr6D 81.276 486 75 10 117 590 103205839 103206320 2.720000e-101 379.0
30 TraesCS4A01G495900 chr6D 81.385 462 70 11 141 590 68087754 68088211 2.740000e-96 363.0
31 TraesCS4A01G495900 chr5D 81.897 464 69 11 135 587 109820649 109821108 9.780000e-101 377.0
32 TraesCS4A01G495900 chr5D 81.143 175 29 2 582 752 457652398 457652224 1.810000e-28 137.0
33 TraesCS4A01G495900 chr5D 82.308 130 23 0 600 729 282374400 282374529 3.050000e-21 113.0
34 TraesCS4A01G495900 chr1B 81.996 461 67 11 141 590 192142094 192141639 9.780000e-101 377.0
35 TraesCS4A01G495900 chr3D 80.952 483 74 12 118 590 497898749 497898275 2.120000e-97 366.0
36 TraesCS4A01G495900 chr3D 72.240 634 126 33 150 751 444933481 444934096 2.320000e-32 150.0
37 TraesCS4A01G495900 chr3A 73.869 597 116 26 189 754 720591845 720592432 6.320000e-48 202.0
38 TraesCS4A01G495900 chr2D 81.250 160 24 6 596 751 471061536 471061693 1.410000e-24 124.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G495900 chr4A 742583936 742587667 3731 True 6892.00 6892 100.0000 1 3732 1 chr4A.!!$R2 3731
1 TraesCS4A01G495900 chr4A 675524932 675526381 1449 True 1773.00 1773 88.9270 1123 2559 1 chr4A.!!$R1 1436
2 TraesCS4A01G495900 chr4A 697970060 697971472 1412 False 1663.00 1663 87.9300 1134 2553 1 chr4A.!!$F2 1419
3 TraesCS4A01G495900 chr7D 1998570 2000844 2274 True 2784.00 2784 89.0930 290 2559 1 chr7D.!!$R1 2269
4 TraesCS4A01G495900 chr7D 30759829 30761248 1419 True 1725.00 1725 88.5930 1134 2559 1 chr7D.!!$R2 1425
5 TraesCS4A01G495900 chr7D 625615354 625616759 1405 False 937.00 937 79.2670 1144 2516 1 chr7D.!!$F2 1372
6 TraesCS4A01G495900 chr7A 63059042 63060447 1405 True 1705.00 1705 88.8420 1134 2516 1 chr7A.!!$R1 1382
7 TraesCS4A01G495900 chr7A 1690227 1692224 1997 False 1114.35 2150 89.9385 764 2554 2 chr7A.!!$F1 1790
8 TraesCS4A01G495900 chr1A 278663837 278664714 877 False 1615.00 1615 99.8860 2566 3442 1 chr1A.!!$F1 876
9 TraesCS4A01G495900 chr3B 187356835 187357713 878 True 1605.00 1605 99.6590 2566 3442 1 chr3B.!!$R1 876
10 TraesCS4A01G495900 chr3B 27503889 27504771 882 False 1580.00 1580 99.0940 2567 3442 1 chr3B.!!$F1 875
11 TraesCS4A01G495900 chr3B 747722424 747723082 658 True 1177.00 1177 98.9380 2565 3222 1 chr3B.!!$R2 657
12 TraesCS4A01G495900 chr6B 704103760 704104637 877 True 1604.00 1604 99.6580 2566 3442 1 chr6B.!!$R1 876
13 TraesCS4A01G495900 chr5A 10557669 10558546 877 False 1604.00 1604 99.6580 2566 3442 1 chr5A.!!$F1 876
14 TraesCS4A01G495900 chr5A 38823743 38824626 883 True 1581.00 1581 99.0950 2566 3442 1 chr5A.!!$R1 876
15 TraesCS4A01G495900 chr4B 583064458 583065354 896 False 1589.00 1589 98.7740 2559 3448 1 chr4B.!!$F2 889
16 TraesCS4A01G495900 chr2B 72755729 72756613 884 True 1583.00 1583 99.0960 2566 3443 1 chr2B.!!$R1 877
17 TraesCS4A01G495900 chr6A 46767138 46768021 883 False 1581.00 1581 99.0950 2566 3442 1 chr6A.!!$F1 876
18 TraesCS4A01G495900 chr7B 682372745 682374163 1418 True 835.00 835 77.9480 1144 2524 1 chr7B.!!$R1 1380
19 TraesCS4A01G495900 chr4D 449386187 449386841 654 False 422.00 422 79.4250 139 756 1 chr4D.!!$F2 617
20 TraesCS4A01G495900 chr3A 720591845 720592432 587 False 202.00 202 73.8690 189 754 1 chr3A.!!$F1 565

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
58 59 0.100682 CGCTACTAGCATGGTGACGT 59.899 55.0 7.89 4.72 42.58 4.34 F
552 566 0.102300 GCGGTTGCTTTCTGGTGTTT 59.898 50.0 0.00 0.00 38.39 2.83 F
609 652 0.106167 CTGACGAGGGAGGGGTGATA 60.106 60.0 0.00 0.00 0.00 2.15 F
977 1280 0.611896 CCAACCCCCAGTCACAATCC 60.612 60.0 0.00 0.00 0.00 3.01 F
1117 1440 0.776479 TATCCCCAACCCACCACCAA 60.776 55.0 0.00 0.00 0.00 3.67 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1076 1399 0.596082 AAAAGATTTGGTCCGCCGTG 59.404 50.000 0.0 0.0 37.67 4.94 R
2474 3090 0.317479 CCCAGAACTCGTCGTCCTTT 59.683 55.000 0.0 0.0 0.00 3.11 R
2475 3091 1.965219 CCCAGAACTCGTCGTCCTT 59.035 57.895 0.0 0.0 0.00 3.36 R
2562 3184 3.790437 CTGGCTCCGTCCCTGCAT 61.790 66.667 0.0 0.0 0.00 3.96 R
3448 4087 0.394938 AGGTACGGTGTTGACATGCA 59.605 50.000 0.0 0.0 0.00 3.96 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 4.593864 GGATGAGGCCTCCGCGAC 62.594 72.222 29.95 15.22 35.02 5.19
18 19 4.593864 GATGAGGCCTCCGCGACC 62.594 72.222 29.95 4.13 35.02 4.79
35 36 4.935495 CCCTGGCGGCGCATGTAT 62.935 66.667 34.36 0.00 0.00 2.29
36 37 2.901840 CCTGGCGGCGCATGTATT 60.902 61.111 34.36 0.00 0.00 1.89
37 38 2.480610 CCTGGCGGCGCATGTATTT 61.481 57.895 34.36 0.00 0.00 1.40
38 39 1.433064 CTGGCGGCGCATGTATTTT 59.567 52.632 34.36 0.00 0.00 1.82
39 40 0.592247 CTGGCGGCGCATGTATTTTC 60.592 55.000 34.36 13.15 0.00 2.29
40 41 1.654137 GGCGGCGCATGTATTTTCG 60.654 57.895 34.36 0.25 0.00 3.46
41 42 2.285857 GCGGCGCATGTATTTTCGC 61.286 57.895 29.21 8.07 45.99 4.70
42 43 1.351707 CGGCGCATGTATTTTCGCT 59.648 52.632 10.83 0.00 45.97 4.93
43 44 0.579630 CGGCGCATGTATTTTCGCTA 59.420 50.000 10.83 0.00 45.97 4.26
44 45 1.656429 CGGCGCATGTATTTTCGCTAC 60.656 52.381 10.83 0.00 45.97 3.58
45 46 1.597663 GGCGCATGTATTTTCGCTACT 59.402 47.619 10.83 0.00 45.97 2.57
46 47 2.798283 GGCGCATGTATTTTCGCTACTA 59.202 45.455 10.83 0.00 45.97 1.82
47 48 3.120991 GGCGCATGTATTTTCGCTACTAG 60.121 47.826 10.83 0.00 45.97 2.57
48 49 3.661936 GCGCATGTATTTTCGCTACTAGC 60.662 47.826 0.30 0.00 43.70 3.42
49 50 3.489416 CGCATGTATTTTCGCTACTAGCA 59.511 43.478 8.78 0.00 42.58 3.49
50 51 4.150627 CGCATGTATTTTCGCTACTAGCAT 59.849 41.667 8.78 0.00 42.58 3.79
51 52 5.377358 GCATGTATTTTCGCTACTAGCATG 58.623 41.667 8.78 3.27 42.58 4.06
52 53 5.615544 GCATGTATTTTCGCTACTAGCATGG 60.616 44.000 8.78 0.00 42.58 3.66
53 54 5.018539 TGTATTTTCGCTACTAGCATGGT 57.981 39.130 8.78 1.62 42.58 3.55
54 55 4.808895 TGTATTTTCGCTACTAGCATGGTG 59.191 41.667 7.89 0.11 42.58 4.17
55 56 3.603158 TTTTCGCTACTAGCATGGTGA 57.397 42.857 7.89 0.00 42.58 4.02
56 57 2.579207 TTCGCTACTAGCATGGTGAC 57.421 50.000 7.89 0.00 42.58 3.67
57 58 0.380733 TCGCTACTAGCATGGTGACG 59.619 55.000 7.89 4.26 42.58 4.35
58 59 0.100682 CGCTACTAGCATGGTGACGT 59.899 55.000 7.89 4.72 42.58 4.34
59 60 1.469251 CGCTACTAGCATGGTGACGTT 60.469 52.381 7.89 0.00 42.58 3.99
60 61 1.927174 GCTACTAGCATGGTGACGTTG 59.073 52.381 7.89 4.56 41.89 4.10
61 62 1.927174 CTACTAGCATGGTGACGTTGC 59.073 52.381 7.89 0.86 41.06 4.17
62 63 1.014044 ACTAGCATGGTGACGTTGCG 61.014 55.000 7.89 0.00 44.24 4.85
63 64 1.005512 TAGCATGGTGACGTTGCGT 60.006 52.632 7.89 0.00 44.24 5.24
64 65 1.288419 TAGCATGGTGACGTTGCGTG 61.288 55.000 7.89 0.00 44.24 5.34
65 66 2.127270 CATGGTGACGTTGCGTGC 60.127 61.111 0.00 0.00 41.37 5.34
66 67 2.590291 ATGGTGACGTTGCGTGCA 60.590 55.556 0.00 0.00 41.37 4.57
67 68 2.606961 ATGGTGACGTTGCGTGCAG 61.607 57.895 0.00 0.00 41.37 4.41
68 69 4.012895 GGTGACGTTGCGTGCAGG 62.013 66.667 1.01 1.01 41.37 4.85
69 70 2.964925 GTGACGTTGCGTGCAGGA 60.965 61.111 11.29 0.00 41.37 3.86
70 71 2.661537 TGACGTTGCGTGCAGGAG 60.662 61.111 11.29 0.50 41.37 3.69
71 72 2.355837 GACGTTGCGTGCAGGAGA 60.356 61.111 11.29 0.00 41.37 3.71
72 73 2.356313 ACGTTGCGTGCAGGAGAG 60.356 61.111 11.29 0.49 39.18 3.20
73 74 2.049156 CGTTGCGTGCAGGAGAGA 60.049 61.111 11.29 0.00 0.00 3.10
74 75 1.664649 CGTTGCGTGCAGGAGAGAA 60.665 57.895 11.29 0.00 0.00 2.87
75 76 1.862806 GTTGCGTGCAGGAGAGAAC 59.137 57.895 11.29 3.25 0.00 3.01
76 77 1.301716 TTGCGTGCAGGAGAGAACC 60.302 57.895 11.29 0.00 0.00 3.62
77 78 2.038814 TTGCGTGCAGGAGAGAACCA 62.039 55.000 11.29 0.00 0.00 3.67
78 79 1.078848 GCGTGCAGGAGAGAACCAT 60.079 57.895 11.29 0.00 0.00 3.55
79 80 0.674895 GCGTGCAGGAGAGAACCATT 60.675 55.000 11.29 0.00 0.00 3.16
80 81 1.081892 CGTGCAGGAGAGAACCATTG 58.918 55.000 0.00 0.00 0.00 2.82
81 82 0.807496 GTGCAGGAGAGAACCATTGC 59.193 55.000 0.00 0.00 33.56 3.56
82 83 0.674581 TGCAGGAGAGAACCATTGCG 60.675 55.000 0.00 0.00 35.00 4.85
83 84 1.372087 GCAGGAGAGAACCATTGCGG 61.372 60.000 0.00 0.00 42.50 5.69
84 85 1.078143 AGGAGAGAACCATTGCGGC 60.078 57.895 0.00 0.00 39.03 6.53
85 86 1.377202 GGAGAGAACCATTGCGGCA 60.377 57.895 0.00 0.00 39.03 5.69
86 87 1.372087 GGAGAGAACCATTGCGGCAG 61.372 60.000 1.67 0.00 39.03 4.85
87 88 0.391661 GAGAGAACCATTGCGGCAGA 60.392 55.000 1.67 0.00 39.03 4.26
88 89 0.674895 AGAGAACCATTGCGGCAGAC 60.675 55.000 1.67 0.00 39.03 3.51
89 90 1.648467 GAGAACCATTGCGGCAGACC 61.648 60.000 1.67 0.00 39.03 3.85
90 91 1.971167 GAACCATTGCGGCAGACCA 60.971 57.895 1.67 0.00 39.03 4.02
91 92 1.304381 AACCATTGCGGCAGACCAT 60.304 52.632 1.67 0.00 39.03 3.55
92 93 1.315257 AACCATTGCGGCAGACCATC 61.315 55.000 1.67 0.00 39.03 3.51
93 94 1.452651 CCATTGCGGCAGACCATCT 60.453 57.895 1.67 0.00 34.57 2.90
94 95 0.179048 CCATTGCGGCAGACCATCTA 60.179 55.000 1.67 0.00 34.57 1.98
95 96 1.224075 CATTGCGGCAGACCATCTAG 58.776 55.000 1.67 0.00 34.57 2.43
96 97 0.833287 ATTGCGGCAGACCATCTAGT 59.167 50.000 1.67 0.00 34.57 2.57
97 98 0.175760 TTGCGGCAGACCATCTAGTC 59.824 55.000 1.67 0.00 37.01 2.59
98 99 1.068250 GCGGCAGACCATCTAGTCC 59.932 63.158 0.00 0.00 37.49 3.85
99 100 1.395826 GCGGCAGACCATCTAGTCCT 61.396 60.000 0.00 0.00 37.49 3.85
100 101 1.982660 CGGCAGACCATCTAGTCCTA 58.017 55.000 0.00 0.00 37.49 2.94
101 102 1.609555 CGGCAGACCATCTAGTCCTAC 59.390 57.143 0.00 0.00 37.49 3.18
102 103 1.964933 GGCAGACCATCTAGTCCTACC 59.035 57.143 0.00 0.00 37.49 3.18
103 104 2.667470 GCAGACCATCTAGTCCTACCA 58.333 52.381 0.00 0.00 37.49 3.25
104 105 3.235200 GCAGACCATCTAGTCCTACCAT 58.765 50.000 0.00 0.00 37.49 3.55
105 106 3.643792 GCAGACCATCTAGTCCTACCATT 59.356 47.826 0.00 0.00 37.49 3.16
106 107 4.101741 GCAGACCATCTAGTCCTACCATTT 59.898 45.833 0.00 0.00 37.49 2.32
107 108 5.605534 CAGACCATCTAGTCCTACCATTTG 58.394 45.833 0.00 0.00 37.49 2.32
108 109 5.363868 CAGACCATCTAGTCCTACCATTTGA 59.636 44.000 0.00 0.00 37.49 2.69
109 110 5.600484 AGACCATCTAGTCCTACCATTTGAG 59.400 44.000 0.00 0.00 37.49 3.02
110 111 4.656112 ACCATCTAGTCCTACCATTTGAGG 59.344 45.833 0.00 0.00 0.00 3.86
111 112 4.503991 CCATCTAGTCCTACCATTTGAGGC 60.504 50.000 0.00 0.00 32.40 4.70
112 113 3.039011 TCTAGTCCTACCATTTGAGGCC 58.961 50.000 0.00 0.00 32.40 5.19
113 114 1.668826 AGTCCTACCATTTGAGGCCA 58.331 50.000 5.01 0.00 32.40 5.36
114 115 1.561542 AGTCCTACCATTTGAGGCCAG 59.438 52.381 5.01 0.00 32.40 4.85
115 116 1.559682 GTCCTACCATTTGAGGCCAGA 59.440 52.381 5.01 0.00 32.40 3.86
116 117 2.026262 GTCCTACCATTTGAGGCCAGAA 60.026 50.000 5.01 0.00 32.40 3.02
117 118 2.852449 TCCTACCATTTGAGGCCAGAAT 59.148 45.455 5.01 0.00 32.40 2.40
118 119 4.044308 TCCTACCATTTGAGGCCAGAATA 58.956 43.478 5.01 0.00 32.40 1.75
119 120 4.137543 CCTACCATTTGAGGCCAGAATAC 58.862 47.826 5.01 0.00 0.00 1.89
120 121 3.018423 ACCATTTGAGGCCAGAATACC 57.982 47.619 5.01 0.00 0.00 2.73
121 122 2.310538 CCATTTGAGGCCAGAATACCC 58.689 52.381 5.01 0.00 0.00 3.69
122 123 2.310538 CATTTGAGGCCAGAATACCCC 58.689 52.381 5.01 0.00 0.00 4.95
123 124 1.681229 TTTGAGGCCAGAATACCCCT 58.319 50.000 5.01 0.00 0.00 4.79
124 125 1.681229 TTGAGGCCAGAATACCCCTT 58.319 50.000 5.01 0.00 0.00 3.95
125 126 1.213296 TGAGGCCAGAATACCCCTTC 58.787 55.000 5.01 0.00 0.00 3.46
126 127 0.106894 GAGGCCAGAATACCCCTTCG 59.893 60.000 5.01 0.00 0.00 3.79
127 128 1.526225 GGCCAGAATACCCCTTCGC 60.526 63.158 0.00 0.00 0.00 4.70
128 129 1.527370 GCCAGAATACCCCTTCGCT 59.473 57.895 0.00 0.00 0.00 4.93
129 130 0.533085 GCCAGAATACCCCTTCGCTC 60.533 60.000 0.00 0.00 0.00 5.03
130 131 0.106894 CCAGAATACCCCTTCGCTCC 59.893 60.000 0.00 0.00 0.00 4.70
131 132 0.106894 CAGAATACCCCTTCGCTCCC 59.893 60.000 0.00 0.00 0.00 4.30
132 133 1.054978 AGAATACCCCTTCGCTCCCC 61.055 60.000 0.00 0.00 0.00 4.81
133 134 1.004361 AATACCCCTTCGCTCCCCT 59.996 57.895 0.00 0.00 0.00 4.79
134 135 0.623617 AATACCCCTTCGCTCCCCTT 60.624 55.000 0.00 0.00 0.00 3.95
135 136 1.345715 ATACCCCTTCGCTCCCCTTG 61.346 60.000 0.00 0.00 0.00 3.61
136 137 4.803908 CCCCTTCGCTCCCCTTGC 62.804 72.222 0.00 0.00 0.00 4.01
143 144 2.665603 GCTCCCCTTGCGAGAACT 59.334 61.111 1.22 0.00 0.00 3.01
144 145 1.448717 GCTCCCCTTGCGAGAACTC 60.449 63.158 1.22 0.00 0.00 3.01
145 146 1.893919 GCTCCCCTTGCGAGAACTCT 61.894 60.000 1.22 0.00 0.00 3.24
146 147 0.610687 CTCCCCTTGCGAGAACTCTT 59.389 55.000 1.22 0.00 0.00 2.85
165 166 6.737608 ACTCTTATCTAGGGTTTCTCTGTCT 58.262 40.000 0.00 0.00 31.91 3.41
166 167 7.186268 ACTCTTATCTAGGGTTTCTCTGTCTT 58.814 38.462 0.00 0.00 31.91 3.01
168 169 8.068892 TCTTATCTAGGGTTTCTCTGTCTTTC 57.931 38.462 0.00 0.00 0.00 2.62
172 173 1.542547 GGGTTTCTCTGTCTTTCGCCA 60.543 52.381 0.00 0.00 0.00 5.69
177 178 2.740055 CTGTCTTTCGCCAGCGCT 60.740 61.111 2.64 2.64 39.59 5.92
219 223 1.077429 GTCCTTGGACCATGGAGGC 60.077 63.158 25.66 13.70 43.14 4.70
228 232 2.436646 CATGGAGGCGTGGTGGAC 60.437 66.667 0.00 0.00 0.00 4.02
264 269 1.309950 GGGAGGGCTTCGATTTTAGC 58.690 55.000 0.00 0.00 36.66 3.09
266 271 2.214347 GGAGGGCTTCGATTTTAGCTC 58.786 52.381 6.77 2.71 38.17 4.09
274 279 6.929606 GGGCTTCGATTTTAGCTCTATTTCTA 59.070 38.462 6.77 0.00 34.98 2.10
287 292 8.794335 AGCTCTATTTCTAAGTTTTGTTAGGG 57.206 34.615 0.00 0.00 31.82 3.53
314 320 1.539929 CCATGATCAAGAGACGAGGCC 60.540 57.143 0.00 0.00 0.00 5.19
344 350 7.065923 GCGGTTTCTTGAAGATAGAATAAGGTT 59.934 37.037 0.00 0.00 32.09 3.50
351 357 6.209774 TGAAGATAGAATAAGGTTCTCCCCA 58.790 40.000 0.00 0.00 0.00 4.96
357 363 3.797671 ATAAGGTTCTCCCCACCTAGT 57.202 47.619 0.00 0.00 44.48 2.57
361 368 0.252558 GTTCTCCCCACCTAGTCCCA 60.253 60.000 0.00 0.00 0.00 4.37
381 388 1.137872 AGTCTTGGCGATGCTTCTAGG 59.862 52.381 0.00 0.00 0.00 3.02
389 396 1.022735 GATGCTTCTAGGGTCGTCGA 58.977 55.000 0.00 0.00 0.00 4.20
392 399 0.810016 GCTTCTAGGGTCGTCGAAGT 59.190 55.000 0.00 0.00 36.23 3.01
433 440 2.058595 CGGACCTCGTGGGGATCTT 61.059 63.158 8.63 0.00 40.03 2.40
449 456 4.359706 GGATCTTGTTTGCGTTTGTCTTT 58.640 39.130 0.00 0.00 0.00 2.52
453 460 4.985409 TCTTGTTTGCGTTTGTCTTTGTTT 59.015 33.333 0.00 0.00 0.00 2.83
490 497 2.157668 GGTCTTCGTTCGTCTACGTGTA 59.842 50.000 0.00 0.00 42.01 2.90
511 524 6.828785 GTGTATGTAGGTTGGATCCTTTTGAT 59.171 38.462 14.23 0.00 38.86 2.57
532 545 1.999735 CTACGCTTCTTTTCATCGGCA 59.000 47.619 0.00 0.00 0.00 5.69
552 566 0.102300 GCGGTTGCTTTCTGGTGTTT 59.898 50.000 0.00 0.00 38.39 2.83
566 580 2.041081 TGGTGTTTTGGTCCTATGAGGG 59.959 50.000 0.00 0.00 35.59 4.30
582 596 1.741770 GGGCTTAGCACCACGACTG 60.742 63.158 6.53 0.00 0.00 3.51
591 634 3.374402 CCACGACTGCCCGACTCT 61.374 66.667 0.00 0.00 0.00 3.24
609 652 0.106167 CTGACGAGGGAGGGGTGATA 60.106 60.000 0.00 0.00 0.00 2.15
611 654 1.062428 TGACGAGGGAGGGGTGATAAT 60.062 52.381 0.00 0.00 0.00 1.28
618 661 2.194597 GGGGTGATAATGGCGGCA 59.805 61.111 16.34 16.34 0.00 5.69
619 662 1.454847 GGGGTGATAATGGCGGCAA 60.455 57.895 18.31 0.00 0.00 4.52
630 673 3.050275 GCGGCAAGCCTTCGACTT 61.050 61.111 9.73 0.00 40.81 3.01
652 695 2.354103 GCTCCAGTGCTTGTAGTCATCA 60.354 50.000 0.00 0.00 0.00 3.07
657 700 4.158579 CCAGTGCTTGTAGTCATCACTAGA 59.841 45.833 0.00 0.00 35.67 2.43
786 834 6.628185 AGTGCATCCTTCTTGATTGAAATTC 58.372 36.000 0.00 0.00 0.00 2.17
806 854 6.974932 ATTCGGAATCCATATGAAATCGAG 57.025 37.500 3.65 0.00 0.00 4.04
827 875 6.148811 TCGAGTGATTTGGTAAAACAGAATCC 59.851 38.462 0.00 0.00 0.00 3.01
843 891 5.119588 ACAGAATCCGTAATAAACACGTGTG 59.880 40.000 24.16 7.50 37.71 3.82
844 892 4.092383 AGAATCCGTAATAAACACGTGTGC 59.908 41.667 24.16 7.65 37.71 4.57
919 967 4.354893 AGTGGTTTGGTCGTAAATGGTA 57.645 40.909 0.00 0.00 0.00 3.25
921 969 4.758165 AGTGGTTTGGTCGTAAATGGTAAG 59.242 41.667 0.00 0.00 0.00 2.34
924 972 6.594937 GTGGTTTGGTCGTAAATGGTAAGATA 59.405 38.462 0.00 0.00 0.00 1.98
925 973 7.119553 GTGGTTTGGTCGTAAATGGTAAGATAA 59.880 37.037 0.00 0.00 0.00 1.75
926 974 7.334921 TGGTTTGGTCGTAAATGGTAAGATAAG 59.665 37.037 0.00 0.00 0.00 1.73
927 975 7.550196 GGTTTGGTCGTAAATGGTAAGATAAGA 59.450 37.037 0.00 0.00 0.00 2.10
977 1280 0.611896 CCAACCCCCAGTCACAATCC 60.612 60.000 0.00 0.00 0.00 3.01
990 1297 4.939439 AGTCACAATCCGTAATTTACCCAC 59.061 41.667 1.04 0.00 0.00 4.61
1054 1377 2.028130 CAGCTACCAACAAACCAACCA 58.972 47.619 0.00 0.00 0.00 3.67
1055 1378 2.428890 CAGCTACCAACAAACCAACCAA 59.571 45.455 0.00 0.00 0.00 3.67
1056 1379 2.429250 AGCTACCAACAAACCAACCAAC 59.571 45.455 0.00 0.00 0.00 3.77
1057 1380 2.482316 GCTACCAACAAACCAACCAACC 60.482 50.000 0.00 0.00 0.00 3.77
1058 1381 1.945580 ACCAACAAACCAACCAACCT 58.054 45.000 0.00 0.00 0.00 3.50
1059 1382 1.552792 ACCAACAAACCAACCAACCTG 59.447 47.619 0.00 0.00 0.00 4.00
1069 1392 3.650369 CCAACCTGGTACACGCAC 58.350 61.111 0.00 0.00 31.35 5.34
1070 1393 2.314647 CCAACCTGGTACACGCACG 61.315 63.158 0.00 0.00 31.35 5.34
1071 1394 2.029964 AACCTGGTACACGCACGG 59.970 61.111 0.00 0.00 0.00 4.94
1117 1440 0.776479 TATCCCCAACCCACCACCAA 60.776 55.000 0.00 0.00 0.00 3.67
1130 1453 1.896183 CACCAACACCATGCCGTCA 60.896 57.895 0.00 0.00 0.00 4.35
2474 3090 3.969250 GAACATGGCGGCCCTCGAA 62.969 63.158 17.97 0.00 42.43 3.71
2475 3091 3.561120 AACATGGCGGCCCTCGAAA 62.561 57.895 17.97 0.00 42.43 3.46
2560 3182 4.202090 GGCCACTTGAATCATCTTCCATTC 60.202 45.833 0.00 0.00 0.00 2.67
2561 3183 4.202090 GCCACTTGAATCATCTTCCATTCC 60.202 45.833 0.00 0.00 0.00 3.01
2562 3184 4.951715 CCACTTGAATCATCTTCCATTCCA 59.048 41.667 0.00 0.00 0.00 3.53
2563 3185 5.597182 CCACTTGAATCATCTTCCATTCCAT 59.403 40.000 0.00 0.00 0.00 3.41
3448 4087 2.126882 TGGATTCGTCCCTGATTCCAT 58.873 47.619 3.87 0.00 41.23 3.41
3449 4088 2.158769 TGGATTCGTCCCTGATTCCATG 60.159 50.000 3.87 0.00 41.23 3.66
3450 4089 1.876156 GATTCGTCCCTGATTCCATGC 59.124 52.381 0.00 0.00 0.00 4.06
3451 4090 0.617935 TTCGTCCCTGATTCCATGCA 59.382 50.000 0.00 0.00 0.00 3.96
3452 4091 0.839277 TCGTCCCTGATTCCATGCAT 59.161 50.000 0.00 0.00 0.00 3.96
3453 4092 0.949397 CGTCCCTGATTCCATGCATG 59.051 55.000 20.19 20.19 0.00 4.06
3454 4093 1.748244 CGTCCCTGATTCCATGCATGT 60.748 52.381 24.58 6.98 0.00 3.21
3455 4094 1.952296 GTCCCTGATTCCATGCATGTC 59.048 52.381 24.58 16.08 0.00 3.06
3456 4095 1.565288 TCCCTGATTCCATGCATGTCA 59.435 47.619 24.58 19.49 0.00 3.58
3457 4096 2.025131 TCCCTGATTCCATGCATGTCAA 60.025 45.455 24.58 16.77 0.00 3.18
3458 4097 2.100252 CCCTGATTCCATGCATGTCAAC 59.900 50.000 24.58 13.55 0.00 3.18
3459 4098 2.756207 CCTGATTCCATGCATGTCAACA 59.244 45.455 24.58 16.86 0.00 3.33
3460 4099 3.428452 CCTGATTCCATGCATGTCAACAC 60.428 47.826 24.58 14.04 0.00 3.32
3461 4100 2.492881 TGATTCCATGCATGTCAACACC 59.507 45.455 24.58 10.42 0.00 4.16
3462 4101 0.880441 TTCCATGCATGTCAACACCG 59.120 50.000 24.58 7.40 0.00 4.94
3463 4102 0.250684 TCCATGCATGTCAACACCGT 60.251 50.000 24.58 0.00 0.00 4.83
3464 4103 1.002544 TCCATGCATGTCAACACCGTA 59.997 47.619 24.58 0.00 0.00 4.02
3465 4104 1.130373 CCATGCATGTCAACACCGTAC 59.870 52.381 24.58 0.00 0.00 3.67
3466 4105 1.130373 CATGCATGTCAACACCGTACC 59.870 52.381 18.91 0.00 0.00 3.34
3467 4106 0.394938 TGCATGTCAACACCGTACCT 59.605 50.000 0.00 0.00 0.00 3.08
3468 4107 1.076332 GCATGTCAACACCGTACCTC 58.924 55.000 0.00 0.00 0.00 3.85
3469 4108 1.337823 GCATGTCAACACCGTACCTCT 60.338 52.381 0.00 0.00 0.00 3.69
3470 4109 2.337583 CATGTCAACACCGTACCTCTG 58.662 52.381 0.00 0.00 0.00 3.35
3471 4110 0.677288 TGTCAACACCGTACCTCTGG 59.323 55.000 0.00 0.00 0.00 3.86
3472 4111 0.677842 GTCAACACCGTACCTCTGGT 59.322 55.000 0.00 0.00 39.66 4.00
3473 4112 1.069668 GTCAACACCGTACCTCTGGTT 59.930 52.381 0.00 0.00 35.96 3.67
3474 4113 1.069513 TCAACACCGTACCTCTGGTTG 59.930 52.381 0.00 0.00 35.96 3.77
3475 4114 0.395312 AACACCGTACCTCTGGTTGG 59.605 55.000 0.00 0.66 35.96 3.77
3476 4115 0.761702 ACACCGTACCTCTGGTTGGT 60.762 55.000 7.31 7.31 41.69 3.67
3477 4116 0.320421 CACCGTACCTCTGGTTGGTG 60.320 60.000 19.22 19.22 46.54 4.17
3478 4117 1.375523 CCGTACCTCTGGTTGGTGC 60.376 63.158 0.00 0.00 38.42 5.01
3479 4118 4.278956 GTACCTCTGGTTGGTGCG 57.721 61.111 0.00 0.00 38.42 5.34
3480 4119 1.669440 GTACCTCTGGTTGGTGCGA 59.331 57.895 0.00 0.00 38.42 5.10
3481 4120 0.249398 GTACCTCTGGTTGGTGCGAT 59.751 55.000 0.00 0.00 38.42 4.58
3482 4121 0.981183 TACCTCTGGTTGGTGCGATT 59.019 50.000 0.00 0.00 38.42 3.34
3483 4122 0.110486 ACCTCTGGTTGGTGCGATTT 59.890 50.000 0.00 0.00 36.30 2.17
3484 4123 1.247567 CCTCTGGTTGGTGCGATTTT 58.752 50.000 0.00 0.00 0.00 1.82
3485 4124 1.200020 CCTCTGGTTGGTGCGATTTTC 59.800 52.381 0.00 0.00 0.00 2.29
3486 4125 1.879380 CTCTGGTTGGTGCGATTTTCA 59.121 47.619 0.00 0.00 0.00 2.69
3487 4126 2.489329 CTCTGGTTGGTGCGATTTTCAT 59.511 45.455 0.00 0.00 0.00 2.57
3488 4127 2.890311 TCTGGTTGGTGCGATTTTCATT 59.110 40.909 0.00 0.00 0.00 2.57
3489 4128 3.320541 TCTGGTTGGTGCGATTTTCATTT 59.679 39.130 0.00 0.00 0.00 2.32
3490 4129 4.057432 CTGGTTGGTGCGATTTTCATTTT 58.943 39.130 0.00 0.00 0.00 1.82
3491 4130 4.054671 TGGTTGGTGCGATTTTCATTTTC 58.945 39.130 0.00 0.00 0.00 2.29
3492 4131 4.202202 TGGTTGGTGCGATTTTCATTTTCT 60.202 37.500 0.00 0.00 0.00 2.52
3493 4132 4.749598 GGTTGGTGCGATTTTCATTTTCTT 59.250 37.500 0.00 0.00 0.00 2.52
3494 4133 5.333263 GGTTGGTGCGATTTTCATTTTCTTG 60.333 40.000 0.00 0.00 0.00 3.02
3495 4134 4.305769 TGGTGCGATTTTCATTTTCTTGG 58.694 39.130 0.00 0.00 0.00 3.61
3496 4135 3.123453 GGTGCGATTTTCATTTTCTTGGC 59.877 43.478 0.00 0.00 0.00 4.52
3497 4136 3.989817 GTGCGATTTTCATTTTCTTGGCT 59.010 39.130 0.00 0.00 0.00 4.75
3498 4137 4.448732 GTGCGATTTTCATTTTCTTGGCTT 59.551 37.500 0.00 0.00 0.00 4.35
3499 4138 5.050159 GTGCGATTTTCATTTTCTTGGCTTT 60.050 36.000 0.00 0.00 0.00 3.51
3500 4139 5.050227 TGCGATTTTCATTTTCTTGGCTTTG 60.050 36.000 0.00 0.00 0.00 2.77
3501 4140 5.177327 GCGATTTTCATTTTCTTGGCTTTGA 59.823 36.000 0.00 0.00 0.00 2.69
3502 4141 6.292811 GCGATTTTCATTTTCTTGGCTTTGAA 60.293 34.615 0.00 0.00 0.00 2.69
3503 4142 7.571798 GCGATTTTCATTTTCTTGGCTTTGAAT 60.572 33.333 0.00 0.00 0.00 2.57
3504 4143 8.284693 CGATTTTCATTTTCTTGGCTTTGAATT 58.715 29.630 0.00 0.00 0.00 2.17
3505 4144 9.955208 GATTTTCATTTTCTTGGCTTTGAATTT 57.045 25.926 0.00 0.00 0.00 1.82
3542 4181 4.284378 GAGAAGCTCGGATTTGATTTGG 57.716 45.455 0.00 0.00 0.00 3.28
3543 4182 2.424956 AGAAGCTCGGATTTGATTTGGC 59.575 45.455 0.00 0.00 0.00 4.52
3544 4183 2.134789 AGCTCGGATTTGATTTGGCT 57.865 45.000 0.00 0.00 0.00 4.75
3545 4184 1.747355 AGCTCGGATTTGATTTGGCTG 59.253 47.619 0.00 0.00 0.00 4.85
3546 4185 1.745087 GCTCGGATTTGATTTGGCTGA 59.255 47.619 0.00 0.00 0.00 4.26
3547 4186 2.223433 GCTCGGATTTGATTTGGCTGAG 60.223 50.000 0.00 0.00 35.58 3.35
3548 4187 2.357009 CTCGGATTTGATTTGGCTGAGG 59.643 50.000 0.00 0.00 0.00 3.86
3549 4188 1.202336 CGGATTTGATTTGGCTGAGGC 60.202 52.381 0.00 0.00 37.82 4.70
3550 4189 2.105766 GGATTTGATTTGGCTGAGGCT 58.894 47.619 7.74 0.00 38.73 4.58
3551 4190 2.498885 GGATTTGATTTGGCTGAGGCTT 59.501 45.455 7.74 0.00 38.73 4.35
3552 4191 3.429960 GGATTTGATTTGGCTGAGGCTTC 60.430 47.826 7.74 2.58 38.73 3.86
3553 4192 1.549203 TTGATTTGGCTGAGGCTTCC 58.451 50.000 7.74 0.00 38.73 3.46
3554 4193 0.700564 TGATTTGGCTGAGGCTTCCT 59.299 50.000 7.74 0.00 38.73 3.36
3555 4194 1.076024 TGATTTGGCTGAGGCTTCCTT 59.924 47.619 7.74 0.00 38.73 3.36
3556 4195 1.747924 GATTTGGCTGAGGCTTCCTTC 59.252 52.381 7.74 0.00 38.73 3.46
3557 4196 0.251341 TTTGGCTGAGGCTTCCTTCC 60.251 55.000 7.74 0.00 38.73 3.46
3558 4197 1.136329 TTGGCTGAGGCTTCCTTCCT 61.136 55.000 7.74 0.00 38.73 3.36
3559 4198 1.136329 TGGCTGAGGCTTCCTTCCTT 61.136 55.000 7.74 0.00 38.73 3.36
3560 4199 0.393673 GGCTGAGGCTTCCTTCCTTC 60.394 60.000 0.00 0.00 38.73 3.46
3561 4200 0.393673 GCTGAGGCTTCCTTCCTTCC 60.394 60.000 0.00 0.00 31.76 3.46
3562 4201 0.254462 CTGAGGCTTCCTTCCTTCCC 59.746 60.000 0.00 0.00 31.76 3.97
3563 4202 0.475632 TGAGGCTTCCTTCCTTCCCA 60.476 55.000 0.00 0.00 31.76 4.37
3564 4203 0.034960 GAGGCTTCCTTCCTTCCCAC 60.035 60.000 0.00 0.00 31.76 4.61
3565 4204 0.476611 AGGCTTCCTTCCTTCCCACT 60.477 55.000 0.00 0.00 0.00 4.00
3566 4205 1.203440 AGGCTTCCTTCCTTCCCACTA 60.203 52.381 0.00 0.00 0.00 2.74
3567 4206 1.633945 GGCTTCCTTCCTTCCCACTAA 59.366 52.381 0.00 0.00 0.00 2.24
3568 4207 2.356227 GGCTTCCTTCCTTCCCACTAAG 60.356 54.545 0.00 0.00 0.00 2.18
3569 4208 2.306219 GCTTCCTTCCTTCCCACTAAGT 59.694 50.000 0.00 0.00 0.00 2.24
3570 4209 3.518303 GCTTCCTTCCTTCCCACTAAGTA 59.482 47.826 0.00 0.00 0.00 2.24
3571 4210 4.019591 GCTTCCTTCCTTCCCACTAAGTAA 60.020 45.833 0.00 0.00 0.00 2.24
3572 4211 5.514310 GCTTCCTTCCTTCCCACTAAGTAAA 60.514 44.000 0.00 0.00 0.00 2.01
3573 4212 6.518516 TTCCTTCCTTCCCACTAAGTAAAA 57.481 37.500 0.00 0.00 0.00 1.52
3574 4213 6.713731 TCCTTCCTTCCCACTAAGTAAAAT 57.286 37.500 0.00 0.00 0.00 1.82
3575 4214 6.481643 TCCTTCCTTCCCACTAAGTAAAATG 58.518 40.000 0.00 0.00 0.00 2.32
3576 4215 5.125578 CCTTCCTTCCCACTAAGTAAAATGC 59.874 44.000 0.00 0.00 0.00 3.56
3577 4216 4.595986 TCCTTCCCACTAAGTAAAATGCC 58.404 43.478 0.00 0.00 0.00 4.40
3578 4217 4.043561 TCCTTCCCACTAAGTAAAATGCCA 59.956 41.667 0.00 0.00 0.00 4.92
3579 4218 4.157840 CCTTCCCACTAAGTAAAATGCCAC 59.842 45.833 0.00 0.00 0.00 5.01
3580 4219 4.374689 TCCCACTAAGTAAAATGCCACA 57.625 40.909 0.00 0.00 0.00 4.17
3581 4220 4.929479 TCCCACTAAGTAAAATGCCACAT 58.071 39.130 0.00 0.00 0.00 3.21
3582 4221 4.947388 TCCCACTAAGTAAAATGCCACATC 59.053 41.667 0.00 0.00 0.00 3.06
3583 4222 4.949856 CCCACTAAGTAAAATGCCACATCT 59.050 41.667 0.00 0.00 0.00 2.90
3584 4223 5.418840 CCCACTAAGTAAAATGCCACATCTT 59.581 40.000 0.00 0.00 0.00 2.40
3585 4224 6.071391 CCCACTAAGTAAAATGCCACATCTTT 60.071 38.462 0.00 0.00 0.00 2.52
3586 4225 6.808212 CCACTAAGTAAAATGCCACATCTTTG 59.192 38.462 0.00 0.00 0.00 2.77
3587 4226 7.309133 CCACTAAGTAAAATGCCACATCTTTGA 60.309 37.037 0.00 0.00 0.00 2.69
3588 4227 8.081633 CACTAAGTAAAATGCCACATCTTTGAA 58.918 33.333 0.00 0.00 0.00 2.69
3589 4228 8.637986 ACTAAGTAAAATGCCACATCTTTGAAA 58.362 29.630 0.00 0.00 0.00 2.69
3590 4229 9.643693 CTAAGTAAAATGCCACATCTTTGAAAT 57.356 29.630 0.00 0.00 0.00 2.17
3591 4230 8.907222 AAGTAAAATGCCACATCTTTGAAATT 57.093 26.923 0.00 0.00 0.00 1.82
3592 4231 8.907222 AGTAAAATGCCACATCTTTGAAATTT 57.093 26.923 0.00 0.00 0.00 1.82
3593 4232 8.776470 AGTAAAATGCCACATCTTTGAAATTTG 58.224 29.630 0.00 0.00 0.00 2.32
3594 4233 6.563222 AAATGCCACATCTTTGAAATTTGG 57.437 33.333 0.00 0.00 0.00 3.28
3595 4234 4.952071 TGCCACATCTTTGAAATTTGGA 57.048 36.364 0.00 0.00 0.00 3.53
3596 4235 5.486735 TGCCACATCTTTGAAATTTGGAT 57.513 34.783 0.00 0.00 0.00 3.41
3597 4236 6.602410 TGCCACATCTTTGAAATTTGGATA 57.398 33.333 0.00 0.00 0.00 2.59
3598 4237 6.397272 TGCCACATCTTTGAAATTTGGATAC 58.603 36.000 0.00 0.00 0.00 2.24
3614 4253 4.483476 GGATACAAACAAGTGTCGCTTT 57.517 40.909 0.00 0.00 34.69 3.51
3615 4254 4.855531 GGATACAAACAAGTGTCGCTTTT 58.144 39.130 0.00 0.00 34.69 2.27
3616 4255 5.992729 GGATACAAACAAGTGTCGCTTTTA 58.007 37.500 0.00 0.00 34.69 1.52
3617 4256 6.608610 GGATACAAACAAGTGTCGCTTTTAT 58.391 36.000 0.00 0.00 34.69 1.40
3618 4257 7.745015 GGATACAAACAAGTGTCGCTTTTATA 58.255 34.615 0.00 0.00 34.69 0.98
3619 4258 7.691050 GGATACAAACAAGTGTCGCTTTTATAC 59.309 37.037 0.00 0.00 34.69 1.47
3620 4259 5.754778 ACAAACAAGTGTCGCTTTTATACC 58.245 37.500 0.00 0.00 34.69 2.73
3621 4260 5.297278 ACAAACAAGTGTCGCTTTTATACCA 59.703 36.000 0.00 0.00 34.69 3.25
3622 4261 5.352643 AACAAGTGTCGCTTTTATACCAC 57.647 39.130 0.00 0.00 34.69 4.16
3623 4262 4.382291 ACAAGTGTCGCTTTTATACCACA 58.618 39.130 0.00 0.00 34.69 4.17
3624 4263 4.817464 ACAAGTGTCGCTTTTATACCACAA 59.183 37.500 0.00 0.00 34.69 3.33
3625 4264 5.049680 ACAAGTGTCGCTTTTATACCACAAG 60.050 40.000 0.00 0.00 34.69 3.16
3626 4265 4.890088 AGTGTCGCTTTTATACCACAAGA 58.110 39.130 0.00 0.00 0.00 3.02
3627 4266 5.302360 AGTGTCGCTTTTATACCACAAGAA 58.698 37.500 0.00 0.00 0.00 2.52
3628 4267 5.178809 AGTGTCGCTTTTATACCACAAGAAC 59.821 40.000 0.00 0.00 0.00 3.01
3629 4268 5.049954 GTGTCGCTTTTATACCACAAGAACA 60.050 40.000 0.00 0.00 0.00 3.18
3630 4269 5.178623 TGTCGCTTTTATACCACAAGAACAG 59.821 40.000 0.00 0.00 0.00 3.16
3631 4270 4.153475 TCGCTTTTATACCACAAGAACAGC 59.847 41.667 0.00 0.00 0.00 4.40
3632 4271 4.671766 CGCTTTTATACCACAAGAACAGCC 60.672 45.833 0.00 0.00 0.00 4.85
3633 4272 4.671766 GCTTTTATACCACAAGAACAGCCG 60.672 45.833 0.00 0.00 0.00 5.52
3634 4273 2.684001 TATACCACAAGAACAGCCGG 57.316 50.000 0.00 0.00 0.00 6.13
3635 4274 0.676782 ATACCACAAGAACAGCCGGC 60.677 55.000 21.89 21.89 0.00 6.13
3636 4275 1.764571 TACCACAAGAACAGCCGGCT 61.765 55.000 27.08 27.08 0.00 5.52
3637 4276 1.003839 CCACAAGAACAGCCGGCTA 60.004 57.895 32.30 0.00 0.00 3.93
3638 4277 0.605319 CCACAAGAACAGCCGGCTAA 60.605 55.000 32.30 0.00 0.00 3.09
3639 4278 1.234821 CACAAGAACAGCCGGCTAAA 58.765 50.000 32.30 0.00 0.00 1.85
3640 4279 1.606668 CACAAGAACAGCCGGCTAAAA 59.393 47.619 32.30 0.00 0.00 1.52
3641 4280 2.034053 CACAAGAACAGCCGGCTAAAAA 59.966 45.455 32.30 0.00 0.00 1.94
3642 4281 2.890945 ACAAGAACAGCCGGCTAAAAAT 59.109 40.909 32.30 13.66 0.00 1.82
3643 4282 3.244976 CAAGAACAGCCGGCTAAAAATG 58.755 45.455 32.30 21.19 0.00 2.32
3644 4283 1.818674 AGAACAGCCGGCTAAAAATGG 59.181 47.619 32.30 17.86 0.00 3.16
3645 4284 1.816224 GAACAGCCGGCTAAAAATGGA 59.184 47.619 32.30 0.00 0.00 3.41
3646 4285 2.143876 ACAGCCGGCTAAAAATGGAT 57.856 45.000 32.30 0.00 0.00 3.41
3647 4286 3.290948 ACAGCCGGCTAAAAATGGATA 57.709 42.857 32.30 0.00 0.00 2.59
3648 4287 2.949644 ACAGCCGGCTAAAAATGGATAC 59.050 45.455 32.30 0.00 0.00 2.24
3664 4303 5.353394 TGGATACACCACCAAAGAGATAC 57.647 43.478 0.00 0.00 46.17 2.24
3665 4304 5.030147 TGGATACACCACCAAAGAGATACT 58.970 41.667 0.00 0.00 46.17 2.12
3666 4305 6.199376 TGGATACACCACCAAAGAGATACTA 58.801 40.000 0.00 0.00 46.17 1.82
3667 4306 6.097839 TGGATACACCACCAAAGAGATACTAC 59.902 42.308 0.00 0.00 46.17 2.73
3668 4307 6.097839 GGATACACCACCAAAGAGATACTACA 59.902 42.308 0.00 0.00 38.79 2.74
3669 4308 7.202011 GGATACACCACCAAAGAGATACTACAT 60.202 40.741 0.00 0.00 38.79 2.29
3670 4309 5.734720 ACACCACCAAAGAGATACTACATG 58.265 41.667 0.00 0.00 0.00 3.21
3671 4310 5.118990 CACCACCAAAGAGATACTACATGG 58.881 45.833 0.00 0.00 34.93 3.66
3672 4311 4.164221 ACCACCAAAGAGATACTACATGGG 59.836 45.833 0.00 0.00 33.85 4.00
3673 4312 4.444876 CCACCAAAGAGATACTACATGGGG 60.445 50.000 0.00 0.00 33.85 4.96
3674 4313 3.136626 ACCAAAGAGATACTACATGGGGC 59.863 47.826 0.00 0.00 33.85 5.80
3675 4314 3.136443 CCAAAGAGATACTACATGGGGCA 59.864 47.826 0.00 0.00 0.00 5.36
3676 4315 4.384056 CAAAGAGATACTACATGGGGCAG 58.616 47.826 0.00 0.00 0.00 4.85
3677 4316 3.336509 AGAGATACTACATGGGGCAGT 57.663 47.619 0.00 0.00 0.00 4.40
3678 4317 2.968574 AGAGATACTACATGGGGCAGTG 59.031 50.000 0.00 0.00 0.00 3.66
3679 4318 2.965831 GAGATACTACATGGGGCAGTGA 59.034 50.000 0.00 0.00 0.00 3.41
3680 4319 3.384168 AGATACTACATGGGGCAGTGAA 58.616 45.455 0.00 0.00 0.00 3.18
3681 4320 3.134804 AGATACTACATGGGGCAGTGAAC 59.865 47.826 0.00 0.00 0.00 3.18
3682 4321 1.362224 ACTACATGGGGCAGTGAACT 58.638 50.000 0.00 0.00 0.00 3.01
3683 4322 1.705186 ACTACATGGGGCAGTGAACTT 59.295 47.619 0.00 0.00 0.00 2.66
3684 4323 2.086869 CTACATGGGGCAGTGAACTTG 58.913 52.381 0.00 0.00 0.00 3.16
3685 4324 0.185901 ACATGGGGCAGTGAACTTGT 59.814 50.000 0.00 0.00 0.00 3.16
3686 4325 0.883833 CATGGGGCAGTGAACTTGTC 59.116 55.000 0.00 0.00 0.00 3.18
3687 4326 0.606401 ATGGGGCAGTGAACTTGTCG 60.606 55.000 0.00 0.00 0.00 4.35
3688 4327 1.070786 GGGGCAGTGAACTTGTCGA 59.929 57.895 0.00 0.00 0.00 4.20
3689 4328 0.534203 GGGGCAGTGAACTTGTCGAA 60.534 55.000 0.00 0.00 0.00 3.71
3690 4329 0.586802 GGGCAGTGAACTTGTCGAAC 59.413 55.000 0.00 0.00 0.00 3.95
3691 4330 0.586802 GGCAGTGAACTTGTCGAACC 59.413 55.000 0.00 0.00 0.00 3.62
3692 4331 1.295792 GCAGTGAACTTGTCGAACCA 58.704 50.000 0.00 0.00 0.00 3.67
3693 4332 1.873591 GCAGTGAACTTGTCGAACCAT 59.126 47.619 0.00 0.00 0.00 3.55
3694 4333 2.290641 GCAGTGAACTTGTCGAACCATT 59.709 45.455 0.00 0.00 0.00 3.16
3695 4334 3.607078 GCAGTGAACTTGTCGAACCATTC 60.607 47.826 0.00 0.00 0.00 2.67
3696 4335 3.559655 CAGTGAACTTGTCGAACCATTCA 59.440 43.478 0.00 0.00 0.00 2.57
3697 4336 4.035091 CAGTGAACTTGTCGAACCATTCAA 59.965 41.667 5.33 0.00 0.00 2.69
3698 4337 4.035208 AGTGAACTTGTCGAACCATTCAAC 59.965 41.667 5.33 2.17 0.00 3.18
3699 4338 4.035208 GTGAACTTGTCGAACCATTCAACT 59.965 41.667 5.33 0.00 0.00 3.16
3700 4339 5.235616 GTGAACTTGTCGAACCATTCAACTA 59.764 40.000 5.33 0.00 0.00 2.24
3701 4340 5.995282 TGAACTTGTCGAACCATTCAACTAT 59.005 36.000 0.00 0.00 0.00 2.12
3702 4341 7.117236 GTGAACTTGTCGAACCATTCAACTATA 59.883 37.037 5.33 0.00 0.00 1.31
3703 4342 7.822334 TGAACTTGTCGAACCATTCAACTATAT 59.178 33.333 0.00 0.00 0.00 0.86
3704 4343 9.309516 GAACTTGTCGAACCATTCAACTATATA 57.690 33.333 0.00 0.00 0.00 0.86
3705 4344 9.832445 AACTTGTCGAACCATTCAACTATATAT 57.168 29.630 0.00 0.00 0.00 0.86
3711 4350 9.366216 TCGAACCATTCAACTATATATACATGC 57.634 33.333 0.00 0.00 0.00 4.06
3712 4351 9.371136 CGAACCATTCAACTATATATACATGCT 57.629 33.333 0.00 0.00 0.00 3.79
3714 4353 8.498054 ACCATTCAACTATATATACATGCTGC 57.502 34.615 0.00 0.00 0.00 5.25
3715 4354 8.102676 ACCATTCAACTATATATACATGCTGCA 58.897 33.333 4.13 4.13 0.00 4.41
3716 4355 8.949177 CCATTCAACTATATATACATGCTGCAA 58.051 33.333 6.36 0.00 0.00 4.08
3719 4358 8.411318 TCAACTATATATACATGCTGCAATCG 57.589 34.615 6.36 0.51 0.00 3.34
3720 4359 8.034804 TCAACTATATATACATGCTGCAATCGT 58.965 33.333 6.36 7.19 0.00 3.73
3721 4360 7.993821 ACTATATATACATGCTGCAATCGTC 57.006 36.000 6.36 0.00 0.00 4.20
3722 4361 5.956171 ATATATACATGCTGCAATCGTCG 57.044 39.130 6.36 0.00 0.00 5.12
3723 4362 0.583438 ATACATGCTGCAATCGTCGC 59.417 50.000 6.36 0.00 0.00 5.19
3724 4363 1.428370 TACATGCTGCAATCGTCGCC 61.428 55.000 6.36 0.00 0.00 5.54
3725 4364 2.436469 ATGCTGCAATCGTCGCCA 60.436 55.556 6.36 0.00 0.00 5.69
3726 4365 1.820906 ATGCTGCAATCGTCGCCAT 60.821 52.632 6.36 0.00 0.00 4.40
3727 4366 0.532640 ATGCTGCAATCGTCGCCATA 60.533 50.000 6.36 0.00 0.00 2.74
3728 4367 0.532640 TGCTGCAATCGTCGCCATAT 60.533 50.000 0.00 0.00 0.00 1.78
3729 4368 0.588252 GCTGCAATCGTCGCCATATT 59.412 50.000 0.00 0.00 0.00 1.28
3730 4369 1.398960 GCTGCAATCGTCGCCATATTC 60.399 52.381 0.00 0.00 0.00 1.75
3731 4370 1.866601 CTGCAATCGTCGCCATATTCA 59.133 47.619 0.00 0.00 0.00 2.57
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 4.593864 GTCGCGGAGGCCTCATCC 62.594 72.222 33.29 17.13 35.02 3.51
18 19 4.935495 ATACATGCGCCGCCAGGG 62.935 66.667 6.63 0.00 38.20 4.45
19 20 2.003658 AAAATACATGCGCCGCCAGG 62.004 55.000 6.63 0.00 41.62 4.45
20 21 0.592247 GAAAATACATGCGCCGCCAG 60.592 55.000 6.63 0.55 0.00 4.85
21 22 1.431440 GAAAATACATGCGCCGCCA 59.569 52.632 6.63 0.00 0.00 5.69
22 23 1.654137 CGAAAATACATGCGCCGCC 60.654 57.895 6.63 0.00 0.00 6.13
23 24 2.285857 GCGAAAATACATGCGCCGC 61.286 57.895 4.18 0.00 43.33 6.53
24 25 3.888221 GCGAAAATACATGCGCCG 58.112 55.556 4.18 0.00 43.33 6.46
26 27 6.067834 TGCTAGTAGCGAAAATACATGCGC 62.068 45.833 17.16 0.00 46.26 6.09
27 28 3.489416 TGCTAGTAGCGAAAATACATGCG 59.511 43.478 17.16 0.00 46.26 4.73
28 29 5.377358 CATGCTAGTAGCGAAAATACATGC 58.623 41.667 17.16 0.00 46.26 4.06
29 30 5.466728 ACCATGCTAGTAGCGAAAATACATG 59.533 40.000 17.16 11.68 46.26 3.21
30 31 5.466728 CACCATGCTAGTAGCGAAAATACAT 59.533 40.000 17.16 0.00 46.26 2.29
31 32 4.808895 CACCATGCTAGTAGCGAAAATACA 59.191 41.667 17.16 0.00 46.26 2.29
32 33 5.047847 TCACCATGCTAGTAGCGAAAATAC 58.952 41.667 17.16 0.00 46.26 1.89
33 34 5.047847 GTCACCATGCTAGTAGCGAAAATA 58.952 41.667 17.16 0.00 46.26 1.40
34 35 3.871594 GTCACCATGCTAGTAGCGAAAAT 59.128 43.478 17.16 2.37 46.26 1.82
35 36 3.259064 GTCACCATGCTAGTAGCGAAAA 58.741 45.455 17.16 0.00 46.26 2.29
36 37 2.734175 CGTCACCATGCTAGTAGCGAAA 60.734 50.000 17.16 0.16 46.26 3.46
37 38 1.202256 CGTCACCATGCTAGTAGCGAA 60.202 52.381 17.16 0.93 46.26 4.70
38 39 0.380733 CGTCACCATGCTAGTAGCGA 59.619 55.000 17.16 5.21 46.26 4.93
39 40 0.100682 ACGTCACCATGCTAGTAGCG 59.899 55.000 17.16 5.87 46.26 4.26
40 41 1.927174 CAACGTCACCATGCTAGTAGC 59.073 52.381 15.56 15.56 42.82 3.58
41 42 1.927174 GCAACGTCACCATGCTAGTAG 59.073 52.381 1.95 0.00 37.12 2.57
42 43 1.734377 CGCAACGTCACCATGCTAGTA 60.734 52.381 7.50 0.00 37.92 1.82
43 44 1.014044 CGCAACGTCACCATGCTAGT 61.014 55.000 7.50 0.00 37.92 2.57
44 45 1.014044 ACGCAACGTCACCATGCTAG 61.014 55.000 7.50 0.00 33.69 3.42
45 46 1.005512 ACGCAACGTCACCATGCTA 60.006 52.632 7.50 0.00 33.69 3.49
46 47 2.280797 ACGCAACGTCACCATGCT 60.281 55.556 7.50 0.00 33.69 3.79
47 48 2.127270 CACGCAACGTCACCATGC 60.127 61.111 0.00 0.00 38.32 4.06
48 49 2.127270 GCACGCAACGTCACCATG 60.127 61.111 0.00 0.00 38.32 3.66
49 50 2.590291 TGCACGCAACGTCACCAT 60.590 55.556 0.00 0.00 38.32 3.55
50 51 3.268603 CTGCACGCAACGTCACCA 61.269 61.111 0.00 0.00 38.32 4.17
51 52 4.012895 CCTGCACGCAACGTCACC 62.013 66.667 0.00 0.00 38.32 4.02
52 53 2.943345 CTCCTGCACGCAACGTCAC 61.943 63.158 0.00 0.00 38.32 3.67
53 54 2.661537 CTCCTGCACGCAACGTCA 60.662 61.111 0.00 0.00 38.32 4.35
54 55 2.355837 TCTCCTGCACGCAACGTC 60.356 61.111 0.00 0.00 38.32 4.34
55 56 2.356313 CTCTCCTGCACGCAACGT 60.356 61.111 0.00 0.00 42.36 3.99
56 57 1.664649 TTCTCTCCTGCACGCAACG 60.665 57.895 0.00 0.00 0.00 4.10
57 58 1.569479 GGTTCTCTCCTGCACGCAAC 61.569 60.000 0.00 0.00 0.00 4.17
58 59 1.301716 GGTTCTCTCCTGCACGCAA 60.302 57.895 0.00 0.00 0.00 4.85
59 60 1.830587 ATGGTTCTCTCCTGCACGCA 61.831 55.000 0.00 0.00 0.00 5.24
60 61 0.674895 AATGGTTCTCTCCTGCACGC 60.675 55.000 0.00 0.00 0.00 5.34
61 62 1.081892 CAATGGTTCTCTCCTGCACG 58.918 55.000 0.00 0.00 0.00 5.34
62 63 0.807496 GCAATGGTTCTCTCCTGCAC 59.193 55.000 0.00 0.00 31.65 4.57
63 64 0.674581 CGCAATGGTTCTCTCCTGCA 60.675 55.000 0.00 0.00 31.04 4.41
64 65 1.372087 CCGCAATGGTTCTCTCCTGC 61.372 60.000 0.00 0.00 0.00 4.85
65 66 1.372087 GCCGCAATGGTTCTCTCCTG 61.372 60.000 0.00 0.00 41.21 3.86
66 67 1.078143 GCCGCAATGGTTCTCTCCT 60.078 57.895 0.00 0.00 41.21 3.69
67 68 1.372087 CTGCCGCAATGGTTCTCTCC 61.372 60.000 0.00 0.00 41.21 3.71
68 69 0.391661 TCTGCCGCAATGGTTCTCTC 60.392 55.000 0.00 0.00 41.21 3.20
69 70 0.674895 GTCTGCCGCAATGGTTCTCT 60.675 55.000 0.00 0.00 41.21 3.10
70 71 1.648467 GGTCTGCCGCAATGGTTCTC 61.648 60.000 0.00 0.00 41.21 2.87
71 72 1.675641 GGTCTGCCGCAATGGTTCT 60.676 57.895 0.00 0.00 41.21 3.01
72 73 1.315257 ATGGTCTGCCGCAATGGTTC 61.315 55.000 0.00 0.00 41.21 3.62
73 74 1.304381 ATGGTCTGCCGCAATGGTT 60.304 52.632 0.00 0.00 41.21 3.67
74 75 1.750399 GATGGTCTGCCGCAATGGT 60.750 57.895 0.00 0.00 41.21 3.55
75 76 0.179048 TAGATGGTCTGCCGCAATGG 60.179 55.000 0.00 0.00 42.50 3.16
76 77 1.224075 CTAGATGGTCTGCCGCAATG 58.776 55.000 0.00 0.00 37.67 2.82
77 78 0.833287 ACTAGATGGTCTGCCGCAAT 59.167 50.000 0.00 0.00 37.67 3.56
78 79 0.175760 GACTAGATGGTCTGCCGCAA 59.824 55.000 0.00 0.00 37.67 4.85
79 80 1.676678 GGACTAGATGGTCTGCCGCA 61.677 60.000 0.00 0.00 37.67 5.69
80 81 1.068250 GGACTAGATGGTCTGCCGC 59.932 63.158 0.00 0.00 37.67 6.53
81 82 1.609555 GTAGGACTAGATGGTCTGCCG 59.390 57.143 0.00 0.00 37.67 5.69
82 83 1.964933 GGTAGGACTAGATGGTCTGCC 59.035 57.143 0.00 0.00 36.55 4.85
83 84 2.667470 TGGTAGGACTAGATGGTCTGC 58.333 52.381 0.00 0.00 36.55 4.26
84 85 5.363868 TCAAATGGTAGGACTAGATGGTCTG 59.636 44.000 0.00 0.00 36.55 3.51
85 86 5.529289 TCAAATGGTAGGACTAGATGGTCT 58.471 41.667 0.00 0.00 36.55 3.85
86 87 5.221541 CCTCAAATGGTAGGACTAGATGGTC 60.222 48.000 0.00 0.00 34.58 4.02
87 88 4.656112 CCTCAAATGGTAGGACTAGATGGT 59.344 45.833 0.00 0.00 34.58 3.55
88 89 4.503991 GCCTCAAATGGTAGGACTAGATGG 60.504 50.000 0.00 0.00 34.58 3.51
89 90 4.503991 GGCCTCAAATGGTAGGACTAGATG 60.504 50.000 0.00 0.00 37.96 2.90
90 91 3.648545 GGCCTCAAATGGTAGGACTAGAT 59.351 47.826 0.00 0.00 37.96 1.98
91 92 3.039011 GGCCTCAAATGGTAGGACTAGA 58.961 50.000 0.00 0.00 37.96 2.43
92 93 2.771943 TGGCCTCAAATGGTAGGACTAG 59.228 50.000 3.32 0.00 41.93 2.57
93 94 2.771943 CTGGCCTCAAATGGTAGGACTA 59.228 50.000 3.32 0.00 41.93 2.59
94 95 1.561542 CTGGCCTCAAATGGTAGGACT 59.438 52.381 3.32 0.00 41.93 3.85
95 96 1.559682 TCTGGCCTCAAATGGTAGGAC 59.440 52.381 3.32 0.00 41.75 3.85
96 97 1.965414 TCTGGCCTCAAATGGTAGGA 58.035 50.000 3.32 0.00 34.58 2.94
97 98 2.806945 TTCTGGCCTCAAATGGTAGG 57.193 50.000 3.32 0.00 35.86 3.18
98 99 4.137543 GGTATTCTGGCCTCAAATGGTAG 58.862 47.826 3.32 0.00 0.00 3.18
99 100 3.117663 GGGTATTCTGGCCTCAAATGGTA 60.118 47.826 3.32 0.00 0.00 3.25
100 101 2.358195 GGGTATTCTGGCCTCAAATGGT 60.358 50.000 3.32 0.00 0.00 3.55
101 102 2.310538 GGGTATTCTGGCCTCAAATGG 58.689 52.381 3.32 0.00 0.00 3.16
102 103 2.091665 AGGGGTATTCTGGCCTCAAATG 60.092 50.000 3.32 0.00 0.00 2.32
103 104 2.217776 AGGGGTATTCTGGCCTCAAAT 58.782 47.619 3.32 3.63 0.00 2.32
104 105 1.681229 AGGGGTATTCTGGCCTCAAA 58.319 50.000 3.32 0.00 0.00 2.69
105 106 1.564348 GAAGGGGTATTCTGGCCTCAA 59.436 52.381 3.32 0.00 0.00 3.02
106 107 1.213296 GAAGGGGTATTCTGGCCTCA 58.787 55.000 3.32 0.00 0.00 3.86
107 108 0.106894 CGAAGGGGTATTCTGGCCTC 59.893 60.000 3.32 0.00 0.00 4.70
108 109 1.984288 GCGAAGGGGTATTCTGGCCT 61.984 60.000 3.32 0.00 0.00 5.19
109 110 1.526225 GCGAAGGGGTATTCTGGCC 60.526 63.158 0.00 0.00 0.00 5.36
110 111 0.533085 GAGCGAAGGGGTATTCTGGC 60.533 60.000 0.00 0.00 0.00 4.85
111 112 0.106894 GGAGCGAAGGGGTATTCTGG 59.893 60.000 0.00 0.00 0.00 3.86
112 113 0.106894 GGGAGCGAAGGGGTATTCTG 59.893 60.000 0.00 0.00 0.00 3.02
113 114 1.054978 GGGGAGCGAAGGGGTATTCT 61.055 60.000 0.00 0.00 0.00 2.40
114 115 1.054978 AGGGGAGCGAAGGGGTATTC 61.055 60.000 0.00 0.00 0.00 1.75
115 116 0.623617 AAGGGGAGCGAAGGGGTATT 60.624 55.000 0.00 0.00 0.00 1.89
116 117 1.004361 AAGGGGAGCGAAGGGGTAT 59.996 57.895 0.00 0.00 0.00 2.73
117 118 1.993391 CAAGGGGAGCGAAGGGGTA 60.993 63.158 0.00 0.00 0.00 3.69
118 119 3.330720 CAAGGGGAGCGAAGGGGT 61.331 66.667 0.00 0.00 0.00 4.95
119 120 4.803908 GCAAGGGGAGCGAAGGGG 62.804 72.222 0.00 0.00 0.00 4.79
126 127 1.448717 GAGTTCTCGCAAGGGGAGC 60.449 63.158 5.52 0.00 41.46 4.70
127 128 0.610687 AAGAGTTCTCGCAAGGGGAG 59.389 55.000 4.12 4.12 42.76 4.30
128 129 1.933021 TAAGAGTTCTCGCAAGGGGA 58.067 50.000 0.00 0.00 39.46 4.81
129 130 2.432510 AGATAAGAGTTCTCGCAAGGGG 59.567 50.000 0.00 0.00 39.46 4.79
130 131 3.810310 AGATAAGAGTTCTCGCAAGGG 57.190 47.619 0.00 0.00 41.48 3.95
131 132 4.261825 CCCTAGATAAGAGTTCTCGCAAGG 60.262 50.000 0.00 0.00 38.47 3.61
132 133 4.339814 ACCCTAGATAAGAGTTCTCGCAAG 59.660 45.833 0.00 0.00 0.00 4.01
133 134 4.279145 ACCCTAGATAAGAGTTCTCGCAA 58.721 43.478 0.00 0.00 0.00 4.85
134 135 3.899726 ACCCTAGATAAGAGTTCTCGCA 58.100 45.455 0.00 0.00 0.00 5.10
135 136 4.922471 AACCCTAGATAAGAGTTCTCGC 57.078 45.455 0.00 0.00 0.00 5.03
136 137 6.544564 AGAGAAACCCTAGATAAGAGTTCTCG 59.455 42.308 0.00 0.00 39.12 4.04
137 138 7.340999 ACAGAGAAACCCTAGATAAGAGTTCTC 59.659 40.741 0.00 0.00 36.93 2.87
138 139 7.186268 ACAGAGAAACCCTAGATAAGAGTTCT 58.814 38.462 0.00 0.00 0.00 3.01
139 140 7.340999 AGACAGAGAAACCCTAGATAAGAGTTC 59.659 40.741 0.00 0.00 0.00 3.01
140 141 7.186268 AGACAGAGAAACCCTAGATAAGAGTT 58.814 38.462 0.00 0.00 0.00 3.01
141 142 6.737608 AGACAGAGAAACCCTAGATAAGAGT 58.262 40.000 0.00 0.00 0.00 3.24
142 143 7.654022 AAGACAGAGAAACCCTAGATAAGAG 57.346 40.000 0.00 0.00 0.00 2.85
143 144 7.148052 CGAAAGACAGAGAAACCCTAGATAAGA 60.148 40.741 0.00 0.00 0.00 2.10
144 145 6.975772 CGAAAGACAGAGAAACCCTAGATAAG 59.024 42.308 0.00 0.00 0.00 1.73
145 146 6.627508 GCGAAAGACAGAGAAACCCTAGATAA 60.628 42.308 0.00 0.00 0.00 1.75
146 147 5.163540 GCGAAAGACAGAGAAACCCTAGATA 60.164 44.000 0.00 0.00 0.00 1.98
243 247 0.463116 TAAAATCGAAGCCCTCCCGC 60.463 55.000 0.00 0.00 0.00 6.13
244 248 1.583054 CTAAAATCGAAGCCCTCCCG 58.417 55.000 0.00 0.00 0.00 5.14
268 273 7.709182 GCACAAACCCTAACAAAACTTAGAAAT 59.291 33.333 0.00 0.00 0.00 2.17
274 279 3.515901 TGGCACAAACCCTAACAAAACTT 59.484 39.130 0.00 0.00 31.92 2.66
314 320 1.635663 ATCTTCAAGAAACCGCCGCG 61.636 55.000 5.59 5.59 0.00 6.46
322 328 9.892130 GGAGAACCTTATTCTATCTTCAAGAAA 57.108 33.333 0.00 0.00 36.60 2.52
344 350 1.153695 ACTGGGACTAGGTGGGGAGA 61.154 60.000 0.00 0.00 0.00 3.71
351 357 1.258445 CGCCAAGACTGGGACTAGGT 61.258 60.000 0.00 0.00 43.74 3.08
357 363 1.841302 AAGCATCGCCAAGACTGGGA 61.841 55.000 0.00 0.00 43.74 4.37
361 368 1.137872 CCTAGAAGCATCGCCAAGACT 59.862 52.381 0.00 0.00 0.00 3.24
381 388 2.354305 ACACGCACTTCGACGACC 60.354 61.111 0.00 0.00 41.67 4.79
389 396 1.523711 CACACCTCCACACGCACTT 60.524 57.895 0.00 0.00 0.00 3.16
392 399 1.078072 AAACACACCTCCACACGCA 60.078 52.632 0.00 0.00 0.00 5.24
428 435 4.798387 ACAAAGACAAACGCAAACAAGATC 59.202 37.500 0.00 0.00 0.00 2.75
433 440 4.299155 TCAAACAAAGACAAACGCAAACA 58.701 34.783 0.00 0.00 0.00 2.83
511 524 2.268298 GCCGATGAAAAGAAGCGTAGA 58.732 47.619 0.00 0.00 0.00 2.59
552 566 1.768870 GCTAAGCCCTCATAGGACCAA 59.231 52.381 0.00 0.00 37.67 3.67
566 580 2.391389 GGCAGTCGTGGTGCTAAGC 61.391 63.158 6.41 0.00 40.97 3.09
582 596 3.827898 CCCTCGTCAGAGTCGGGC 61.828 72.222 0.00 0.00 42.86 6.13
591 634 0.337082 TTATCACCCCTCCCTCGTCA 59.663 55.000 0.00 0.00 0.00 4.35
627 670 1.417890 ACTACAAGCACTGGAGCAAGT 59.582 47.619 0.00 0.00 40.05 3.16
630 673 1.047801 TGACTACAAGCACTGGAGCA 58.952 50.000 0.00 0.00 40.05 4.26
679 722 9.836076 AGTACAAAGAACACAAGAAGTAAAAAC 57.164 29.630 0.00 0.00 0.00 2.43
707 750 9.506018 TTCAAATCTATTCATGAAGTGTCAAGA 57.494 29.630 14.54 9.41 37.30 3.02
755 802 0.247736 AGAAGGATGCACTCGGTGAC 59.752 55.000 8.04 1.29 35.23 3.67
760 807 3.264947 TCAATCAAGAAGGATGCACTCG 58.735 45.455 0.00 0.00 0.00 4.18
786 834 5.230182 TCACTCGATTTCATATGGATTCCG 58.770 41.667 2.13 0.00 0.00 4.30
806 854 6.009115 ACGGATTCTGTTTTACCAAATCAC 57.991 37.500 0.00 0.00 0.00 3.06
843 891 4.240888 ACACATGATATCTGCAGATACGC 58.759 43.478 33.31 27.16 39.57 4.42
844 892 4.861462 GGACACATGATATCTGCAGATACG 59.139 45.833 33.31 23.86 39.57 3.06
887 935 5.069516 ACGACCAAACCACTAGTAAGAAAGA 59.930 40.000 0.00 0.00 0.00 2.52
888 936 5.295152 ACGACCAAACCACTAGTAAGAAAG 58.705 41.667 0.00 0.00 0.00 2.62
889 937 5.280654 ACGACCAAACCACTAGTAAGAAA 57.719 39.130 0.00 0.00 0.00 2.52
890 938 4.942761 ACGACCAAACCACTAGTAAGAA 57.057 40.909 0.00 0.00 0.00 2.52
895 943 4.202388 ACCATTTACGACCAAACCACTAGT 60.202 41.667 0.00 0.00 0.00 2.57
896 944 4.320870 ACCATTTACGACCAAACCACTAG 58.679 43.478 0.00 0.00 0.00 2.57
899 947 4.756135 TCTTACCATTTACGACCAAACCAC 59.244 41.667 0.00 0.00 0.00 4.16
955 1251 1.576368 TTGTGACTGGGGGTTGGTGT 61.576 55.000 0.00 0.00 0.00 4.16
977 1280 1.409101 CCTGGGGGTGGGTAAATTACG 60.409 57.143 0.00 0.00 0.00 3.18
1024 1331 4.096003 GGTAGCTGCAGGCCGGAA 62.096 66.667 17.12 0.00 43.05 4.30
1054 1377 2.029964 CCGTGCGTGTACCAGGTT 59.970 61.111 0.00 0.00 0.00 3.50
1055 1378 4.675029 GCCGTGCGTGTACCAGGT 62.675 66.667 0.00 0.00 0.00 4.00
1056 1379 4.373116 AGCCGTGCGTGTACCAGG 62.373 66.667 0.00 0.00 0.00 4.45
1057 1380 3.112075 CAGCCGTGCGTGTACCAG 61.112 66.667 0.00 0.00 0.00 4.00
1076 1399 0.596082 AAAAGATTTGGTCCGCCGTG 59.404 50.000 0.00 0.00 37.67 4.94
1080 1403 4.202020 GGGATAAGAAAAGATTTGGTCCGC 60.202 45.833 0.00 0.00 0.00 5.54
1524 1880 2.668212 CCGGAAGAACTGCGCCAA 60.668 61.111 4.18 0.00 37.59 4.52
2015 2616 3.063084 GTCGTCTCCTGCTCCGGT 61.063 66.667 0.00 0.00 0.00 5.28
2142 2743 3.723348 GTGCCCGCGGTTGAGAAC 61.723 66.667 26.12 9.68 0.00 3.01
2367 2983 1.278637 CGTCGAACTTGTTGGCCAC 59.721 57.895 3.88 0.75 0.00 5.01
2474 3090 0.317479 CCCAGAACTCGTCGTCCTTT 59.683 55.000 0.00 0.00 0.00 3.11
2475 3091 1.965219 CCCAGAACTCGTCGTCCTT 59.035 57.895 0.00 0.00 0.00 3.36
2560 3182 4.864334 GGCTCCGTCCCTGCATGG 62.864 72.222 0.78 0.78 0.00 3.66
2561 3183 4.100084 TGGCTCCGTCCCTGCATG 62.100 66.667 0.00 0.00 0.00 4.06
2562 3184 3.790437 CTGGCTCCGTCCCTGCAT 61.790 66.667 0.00 0.00 0.00 3.96
3448 4087 0.394938 AGGTACGGTGTTGACATGCA 59.605 50.000 0.00 0.00 0.00 3.96
3449 4088 1.076332 GAGGTACGGTGTTGACATGC 58.924 55.000 0.00 0.00 0.00 4.06
3450 4089 2.337583 CAGAGGTACGGTGTTGACATG 58.662 52.381 0.00 0.00 0.00 3.21
3451 4090 1.275291 CCAGAGGTACGGTGTTGACAT 59.725 52.381 0.00 0.00 0.00 3.06
3452 4091 0.677288 CCAGAGGTACGGTGTTGACA 59.323 55.000 0.00 0.00 0.00 3.58
3453 4092 0.677842 ACCAGAGGTACGGTGTTGAC 59.322 55.000 0.00 0.00 32.11 3.18
3454 4093 1.069513 CAACCAGAGGTACGGTGTTGA 59.930 52.381 0.00 0.00 33.12 3.18
3455 4094 1.508632 CAACCAGAGGTACGGTGTTG 58.491 55.000 0.00 0.00 33.12 3.33
3456 4095 0.395312 CCAACCAGAGGTACGGTGTT 59.605 55.000 0.00 0.00 33.12 3.32
3457 4096 0.761702 ACCAACCAGAGGTACGGTGT 60.762 55.000 8.86 0.00 39.28 4.16
3458 4097 0.320421 CACCAACCAGAGGTACGGTG 60.320 60.000 17.95 17.95 46.00 4.94
3459 4098 2.055299 CACCAACCAGAGGTACGGT 58.945 57.895 4.78 4.78 40.75 4.83
3460 4099 1.375523 GCACCAACCAGAGGTACGG 60.376 63.158 3.68 3.68 37.23 4.02
3461 4100 1.736645 CGCACCAACCAGAGGTACG 60.737 63.158 0.00 0.00 39.29 3.67
3462 4101 0.249398 ATCGCACCAACCAGAGGTAC 59.751 55.000 0.00 0.00 37.23 3.34
3463 4102 0.981183 AATCGCACCAACCAGAGGTA 59.019 50.000 0.00 0.00 37.23 3.08
3464 4103 0.110486 AAATCGCACCAACCAGAGGT 59.890 50.000 0.00 0.00 40.85 3.85
3465 4104 1.200020 GAAAATCGCACCAACCAGAGG 59.800 52.381 0.00 0.00 0.00 3.69
3466 4105 1.879380 TGAAAATCGCACCAACCAGAG 59.121 47.619 0.00 0.00 0.00 3.35
3467 4106 1.974265 TGAAAATCGCACCAACCAGA 58.026 45.000 0.00 0.00 0.00 3.86
3468 4107 3.302365 AATGAAAATCGCACCAACCAG 57.698 42.857 0.00 0.00 0.00 4.00
3469 4108 3.742433 AAATGAAAATCGCACCAACCA 57.258 38.095 0.00 0.00 0.00 3.67
3470 4109 4.306600 AGAAAATGAAAATCGCACCAACC 58.693 39.130 0.00 0.00 0.00 3.77
3471 4110 5.333263 CCAAGAAAATGAAAATCGCACCAAC 60.333 40.000 0.00 0.00 0.00 3.77
3472 4111 4.749099 CCAAGAAAATGAAAATCGCACCAA 59.251 37.500 0.00 0.00 0.00 3.67
3473 4112 4.305769 CCAAGAAAATGAAAATCGCACCA 58.694 39.130 0.00 0.00 0.00 4.17
3474 4113 3.123453 GCCAAGAAAATGAAAATCGCACC 59.877 43.478 0.00 0.00 0.00 5.01
3475 4114 3.989817 AGCCAAGAAAATGAAAATCGCAC 59.010 39.130 0.00 0.00 0.00 5.34
3476 4115 4.255833 AGCCAAGAAAATGAAAATCGCA 57.744 36.364 0.00 0.00 0.00 5.10
3477 4116 5.177327 TCAAAGCCAAGAAAATGAAAATCGC 59.823 36.000 0.00 0.00 0.00 4.58
3478 4117 6.768029 TCAAAGCCAAGAAAATGAAAATCG 57.232 33.333 0.00 0.00 0.00 3.34
3479 4118 9.955208 AAATTCAAAGCCAAGAAAATGAAAATC 57.045 25.926 0.00 0.00 31.37 2.17
3504 4143 8.635124 CGAGCTTCTCGCAAAAATAAAATAAAA 58.365 29.630 3.19 0.00 46.75 1.52
3505 4144 8.157159 CGAGCTTCTCGCAAAAATAAAATAAA 57.843 30.769 3.19 0.00 46.75 1.40
3506 4145 7.719689 CGAGCTTCTCGCAAAAATAAAATAA 57.280 32.000 3.19 0.00 46.75 1.40
3521 4160 3.488216 GCCAAATCAAATCCGAGCTTCTC 60.488 47.826 0.00 0.00 0.00 2.87
3522 4161 2.424956 GCCAAATCAAATCCGAGCTTCT 59.575 45.455 0.00 0.00 0.00 2.85
3523 4162 2.424956 AGCCAAATCAAATCCGAGCTTC 59.575 45.455 0.00 0.00 0.00 3.86
3524 4163 2.165030 CAGCCAAATCAAATCCGAGCTT 59.835 45.455 0.00 0.00 0.00 3.74
3525 4164 1.747355 CAGCCAAATCAAATCCGAGCT 59.253 47.619 0.00 0.00 0.00 4.09
3526 4165 1.745087 TCAGCCAAATCAAATCCGAGC 59.255 47.619 0.00 0.00 0.00 5.03
3527 4166 2.357009 CCTCAGCCAAATCAAATCCGAG 59.643 50.000 0.00 0.00 0.00 4.63
3528 4167 2.368439 CCTCAGCCAAATCAAATCCGA 58.632 47.619 0.00 0.00 0.00 4.55
3529 4168 1.202336 GCCTCAGCCAAATCAAATCCG 60.202 52.381 0.00 0.00 0.00 4.18
3530 4169 2.105766 AGCCTCAGCCAAATCAAATCC 58.894 47.619 0.00 0.00 41.25 3.01
3531 4170 3.429960 GGAAGCCTCAGCCAAATCAAATC 60.430 47.826 0.00 0.00 41.25 2.17
3532 4171 2.498885 GGAAGCCTCAGCCAAATCAAAT 59.501 45.455 0.00 0.00 41.25 2.32
3533 4172 1.895131 GGAAGCCTCAGCCAAATCAAA 59.105 47.619 0.00 0.00 41.25 2.69
3534 4173 1.076024 AGGAAGCCTCAGCCAAATCAA 59.924 47.619 0.00 0.00 41.25 2.57
3535 4174 0.700564 AGGAAGCCTCAGCCAAATCA 59.299 50.000 0.00 0.00 41.25 2.57
3536 4175 1.747924 GAAGGAAGCCTCAGCCAAATC 59.252 52.381 0.00 0.00 41.25 2.17
3537 4176 1.618074 GGAAGGAAGCCTCAGCCAAAT 60.618 52.381 0.00 0.00 41.25 2.32
3538 4177 0.251341 GGAAGGAAGCCTCAGCCAAA 60.251 55.000 0.00 0.00 41.25 3.28
3539 4178 1.136329 AGGAAGGAAGCCTCAGCCAA 61.136 55.000 0.00 0.00 41.25 4.52
3540 4179 1.136329 AAGGAAGGAAGCCTCAGCCA 61.136 55.000 0.00 0.00 41.25 4.75
3541 4180 0.393673 GAAGGAAGGAAGCCTCAGCC 60.394 60.000 0.00 0.00 41.25 4.85
3542 4181 0.393673 GGAAGGAAGGAAGCCTCAGC 60.394 60.000 0.00 0.00 33.76 4.26
3543 4182 0.254462 GGGAAGGAAGGAAGCCTCAG 59.746 60.000 0.00 0.00 33.76 3.35
3544 4183 0.475632 TGGGAAGGAAGGAAGCCTCA 60.476 55.000 0.00 0.00 33.76 3.86
3545 4184 0.034960 GTGGGAAGGAAGGAAGCCTC 60.035 60.000 0.00 0.00 33.76 4.70
3546 4185 0.476611 AGTGGGAAGGAAGGAAGCCT 60.477 55.000 0.00 0.00 37.35 4.58
3547 4186 1.286248 TAGTGGGAAGGAAGGAAGCC 58.714 55.000 0.00 0.00 0.00 4.35
3548 4187 2.306219 ACTTAGTGGGAAGGAAGGAAGC 59.694 50.000 0.00 0.00 0.00 3.86
3549 4188 5.757099 TTACTTAGTGGGAAGGAAGGAAG 57.243 43.478 0.00 0.00 0.00 3.46
3550 4189 6.518516 TTTTACTTAGTGGGAAGGAAGGAA 57.481 37.500 0.00 0.00 30.85 3.36
3551 4190 6.481643 CATTTTACTTAGTGGGAAGGAAGGA 58.518 40.000 0.00 0.00 30.85 3.36
3552 4191 5.125578 GCATTTTACTTAGTGGGAAGGAAGG 59.874 44.000 0.00 0.00 30.85 3.46
3553 4192 5.125578 GGCATTTTACTTAGTGGGAAGGAAG 59.874 44.000 0.00 0.00 30.85 3.46
3554 4193 5.014202 GGCATTTTACTTAGTGGGAAGGAA 58.986 41.667 0.00 0.00 0.00 3.36
3555 4194 4.043561 TGGCATTTTACTTAGTGGGAAGGA 59.956 41.667 0.00 0.00 0.00 3.36
3556 4195 4.157840 GTGGCATTTTACTTAGTGGGAAGG 59.842 45.833 0.00 0.00 0.00 3.46
3557 4196 4.764823 TGTGGCATTTTACTTAGTGGGAAG 59.235 41.667 0.00 0.00 0.00 3.46
3558 4197 4.730966 TGTGGCATTTTACTTAGTGGGAA 58.269 39.130 0.00 0.00 0.00 3.97
3559 4198 4.374689 TGTGGCATTTTACTTAGTGGGA 57.625 40.909 0.00 0.00 0.00 4.37
3560 4199 4.949856 AGATGTGGCATTTTACTTAGTGGG 59.050 41.667 0.00 0.00 0.00 4.61
3561 4200 6.515272 AAGATGTGGCATTTTACTTAGTGG 57.485 37.500 0.00 0.00 0.00 4.00
3562 4201 7.592938 TCAAAGATGTGGCATTTTACTTAGTG 58.407 34.615 0.00 0.00 0.00 2.74
3563 4202 7.759489 TCAAAGATGTGGCATTTTACTTAGT 57.241 32.000 0.00 0.00 0.00 2.24
3564 4203 9.643693 ATTTCAAAGATGTGGCATTTTACTTAG 57.356 29.630 0.00 0.00 0.00 2.18
3565 4204 9.995003 AATTTCAAAGATGTGGCATTTTACTTA 57.005 25.926 0.00 0.00 0.00 2.24
3566 4205 8.907222 AATTTCAAAGATGTGGCATTTTACTT 57.093 26.923 0.00 0.00 0.00 2.24
3567 4206 8.776470 CAAATTTCAAAGATGTGGCATTTTACT 58.224 29.630 0.00 0.00 0.00 2.24
3568 4207 8.016801 CCAAATTTCAAAGATGTGGCATTTTAC 58.983 33.333 0.00 0.00 0.00 2.01
3569 4208 7.935755 TCCAAATTTCAAAGATGTGGCATTTTA 59.064 29.630 0.00 0.00 32.80 1.52
3570 4209 6.771749 TCCAAATTTCAAAGATGTGGCATTTT 59.228 30.769 0.00 0.00 32.80 1.82
3571 4210 6.297582 TCCAAATTTCAAAGATGTGGCATTT 58.702 32.000 0.00 0.00 32.80 2.32
3572 4211 5.867330 TCCAAATTTCAAAGATGTGGCATT 58.133 33.333 0.00 0.00 32.80 3.56
3573 4212 5.486735 TCCAAATTTCAAAGATGTGGCAT 57.513 34.783 0.00 0.00 32.80 4.40
3574 4213 4.952071 TCCAAATTTCAAAGATGTGGCA 57.048 36.364 0.00 0.00 32.80 4.92
3575 4214 6.397272 TGTATCCAAATTTCAAAGATGTGGC 58.603 36.000 0.00 0.00 32.80 5.01
3576 4215 8.711457 GTTTGTATCCAAATTTCAAAGATGTGG 58.289 33.333 3.07 0.00 42.26 4.17
3577 4216 9.258826 TGTTTGTATCCAAATTTCAAAGATGTG 57.741 29.630 3.07 0.00 42.26 3.21
3578 4217 9.829507 TTGTTTGTATCCAAATTTCAAAGATGT 57.170 25.926 3.07 0.00 42.26 3.06
3581 4220 9.311916 CACTTGTTTGTATCCAAATTTCAAAGA 57.688 29.630 3.07 0.26 42.26 2.52
3582 4221 9.097257 ACACTTGTTTGTATCCAAATTTCAAAG 57.903 29.630 3.07 0.00 42.26 2.77
3583 4222 9.092876 GACACTTGTTTGTATCCAAATTTCAAA 57.907 29.630 0.00 0.00 42.26 2.69
3584 4223 7.433719 CGACACTTGTTTGTATCCAAATTTCAA 59.566 33.333 0.00 0.00 42.26 2.69
3585 4224 6.915300 CGACACTTGTTTGTATCCAAATTTCA 59.085 34.615 0.00 0.00 42.26 2.69
3586 4225 6.129194 GCGACACTTGTTTGTATCCAAATTTC 60.129 38.462 0.00 0.00 42.26 2.17
3587 4226 5.689961 GCGACACTTGTTTGTATCCAAATTT 59.310 36.000 0.00 0.00 42.26 1.82
3588 4227 5.009610 AGCGACACTTGTTTGTATCCAAATT 59.990 36.000 0.00 0.00 42.26 1.82
3589 4228 4.518970 AGCGACACTTGTTTGTATCCAAAT 59.481 37.500 0.00 0.00 42.26 2.32
3590 4229 3.880490 AGCGACACTTGTTTGTATCCAAA 59.120 39.130 0.00 0.00 38.22 3.28
3591 4230 3.472652 AGCGACACTTGTTTGTATCCAA 58.527 40.909 0.00 0.00 0.00 3.53
3592 4231 3.120321 AGCGACACTTGTTTGTATCCA 57.880 42.857 0.00 0.00 0.00 3.41
3593 4232 4.483476 AAAGCGACACTTGTTTGTATCC 57.517 40.909 0.00 0.00 39.09 2.59
3594 4233 7.691050 GGTATAAAAGCGACACTTGTTTGTATC 59.309 37.037 0.00 0.00 39.09 2.24
3595 4234 7.173562 TGGTATAAAAGCGACACTTGTTTGTAT 59.826 33.333 0.00 0.00 39.09 2.29
3596 4235 6.482641 TGGTATAAAAGCGACACTTGTTTGTA 59.517 34.615 0.00 0.00 39.09 2.41
3597 4236 5.297278 TGGTATAAAAGCGACACTTGTTTGT 59.703 36.000 0.00 0.00 39.09 2.83
3598 4237 5.623673 GTGGTATAAAAGCGACACTTGTTTG 59.376 40.000 0.00 0.00 39.09 2.93
3599 4238 5.297278 TGTGGTATAAAAGCGACACTTGTTT 59.703 36.000 0.00 0.00 39.09 2.83
3600 4239 4.817464 TGTGGTATAAAAGCGACACTTGTT 59.183 37.500 0.00 0.00 39.09 2.83
3601 4240 4.382291 TGTGGTATAAAAGCGACACTTGT 58.618 39.130 0.00 0.00 39.09 3.16
3602 4241 5.178623 TCTTGTGGTATAAAAGCGACACTTG 59.821 40.000 0.00 0.00 39.09 3.16
3603 4242 5.302360 TCTTGTGGTATAAAAGCGACACTT 58.698 37.500 0.00 0.00 41.70 3.16
3604 4243 4.890088 TCTTGTGGTATAAAAGCGACACT 58.110 39.130 0.00 0.00 0.00 3.55
3605 4244 5.049954 TGTTCTTGTGGTATAAAAGCGACAC 60.050 40.000 0.00 0.00 0.00 3.67
3606 4245 5.057819 TGTTCTTGTGGTATAAAAGCGACA 58.942 37.500 0.00 0.00 0.00 4.35
3607 4246 5.600908 TGTTCTTGTGGTATAAAAGCGAC 57.399 39.130 0.00 0.00 0.00 5.19
3608 4247 4.153475 GCTGTTCTTGTGGTATAAAAGCGA 59.847 41.667 0.00 0.00 0.00 4.93
3609 4248 4.403453 GCTGTTCTTGTGGTATAAAAGCG 58.597 43.478 0.00 0.00 0.00 4.68
3610 4249 4.671766 CGGCTGTTCTTGTGGTATAAAAGC 60.672 45.833 0.00 0.00 0.00 3.51
3611 4250 4.142687 CCGGCTGTTCTTGTGGTATAAAAG 60.143 45.833 0.00 0.00 0.00 2.27
3612 4251 3.754323 CCGGCTGTTCTTGTGGTATAAAA 59.246 43.478 0.00 0.00 0.00 1.52
3613 4252 3.340034 CCGGCTGTTCTTGTGGTATAAA 58.660 45.455 0.00 0.00 0.00 1.40
3614 4253 2.937873 GCCGGCTGTTCTTGTGGTATAA 60.938 50.000 22.15 0.00 0.00 0.98
3615 4254 1.406341 GCCGGCTGTTCTTGTGGTATA 60.406 52.381 22.15 0.00 0.00 1.47
3616 4255 0.676782 GCCGGCTGTTCTTGTGGTAT 60.677 55.000 22.15 0.00 0.00 2.73
3617 4256 1.302192 GCCGGCTGTTCTTGTGGTA 60.302 57.895 22.15 0.00 0.00 3.25
3618 4257 1.764571 TAGCCGGCTGTTCTTGTGGT 61.765 55.000 38.98 10.70 0.00 4.16
3619 4258 0.605319 TTAGCCGGCTGTTCTTGTGG 60.605 55.000 38.98 0.00 0.00 4.17
3620 4259 1.234821 TTTAGCCGGCTGTTCTTGTG 58.765 50.000 38.98 0.00 0.00 3.33
3621 4260 1.975660 TTTTAGCCGGCTGTTCTTGT 58.024 45.000 38.98 12.97 0.00 3.16
3622 4261 3.244976 CATTTTTAGCCGGCTGTTCTTG 58.755 45.455 38.98 24.50 0.00 3.02
3623 4262 2.231235 CCATTTTTAGCCGGCTGTTCTT 59.769 45.455 38.98 17.67 0.00 2.52
3624 4263 1.818674 CCATTTTTAGCCGGCTGTTCT 59.181 47.619 38.98 15.51 0.00 3.01
3625 4264 1.816224 TCCATTTTTAGCCGGCTGTTC 59.184 47.619 38.98 2.93 0.00 3.18
3626 4265 1.917872 TCCATTTTTAGCCGGCTGTT 58.082 45.000 38.98 16.38 0.00 3.16
3627 4266 2.143876 ATCCATTTTTAGCCGGCTGT 57.856 45.000 38.98 17.24 0.00 4.40
3628 4267 2.948979 TGTATCCATTTTTAGCCGGCTG 59.051 45.455 38.98 21.40 0.00 4.85
3629 4268 2.949644 GTGTATCCATTTTTAGCCGGCT 59.050 45.455 34.85 34.85 0.00 5.52
3630 4269 2.034179 GGTGTATCCATTTTTAGCCGGC 59.966 50.000 21.89 21.89 35.97 6.13
3631 4270 3.283751 TGGTGTATCCATTTTTAGCCGG 58.716 45.455 0.00 0.00 41.93 6.13
3642 4281 5.030147 AGTATCTCTTTGGTGGTGTATCCA 58.970 41.667 0.00 0.00 45.01 3.41
3643 4282 5.615925 AGTATCTCTTTGGTGGTGTATCC 57.384 43.478 0.00 0.00 0.00 2.59
3644 4283 7.108841 TGTAGTATCTCTTTGGTGGTGTATC 57.891 40.000 0.00 0.00 0.00 2.24
3645 4284 7.419057 CCATGTAGTATCTCTTTGGTGGTGTAT 60.419 40.741 0.00 0.00 0.00 2.29
3646 4285 6.127168 CCATGTAGTATCTCTTTGGTGGTGTA 60.127 42.308 0.00 0.00 0.00 2.90
3647 4286 5.338381 CCATGTAGTATCTCTTTGGTGGTGT 60.338 44.000 0.00 0.00 0.00 4.16
3648 4287 5.118990 CCATGTAGTATCTCTTTGGTGGTG 58.881 45.833 0.00 0.00 0.00 4.17
3649 4288 4.164221 CCCATGTAGTATCTCTTTGGTGGT 59.836 45.833 0.00 0.00 0.00 4.16
3650 4289 4.444876 CCCCATGTAGTATCTCTTTGGTGG 60.445 50.000 0.00 0.00 0.00 4.61
3651 4290 4.708177 CCCCATGTAGTATCTCTTTGGTG 58.292 47.826 0.00 0.00 0.00 4.17
3652 4291 3.136626 GCCCCATGTAGTATCTCTTTGGT 59.863 47.826 0.00 0.00 0.00 3.67
3653 4292 3.136443 TGCCCCATGTAGTATCTCTTTGG 59.864 47.826 0.00 0.00 0.00 3.28
3654 4293 4.141620 ACTGCCCCATGTAGTATCTCTTTG 60.142 45.833 0.00 0.00 38.23 2.77
3655 4294 4.040755 ACTGCCCCATGTAGTATCTCTTT 58.959 43.478 0.00 0.00 38.23 2.52
3656 4295 3.389329 CACTGCCCCATGTAGTATCTCTT 59.611 47.826 0.00 0.00 37.89 2.85
3657 4296 2.968574 CACTGCCCCATGTAGTATCTCT 59.031 50.000 0.00 0.00 37.89 3.10
3658 4297 2.965831 TCACTGCCCCATGTAGTATCTC 59.034 50.000 0.00 0.00 37.89 2.75
3659 4298 3.046283 TCACTGCCCCATGTAGTATCT 57.954 47.619 0.00 0.00 37.89 1.98
3660 4299 3.134804 AGTTCACTGCCCCATGTAGTATC 59.865 47.826 0.00 0.00 37.89 2.24
3661 4300 3.115390 AGTTCACTGCCCCATGTAGTAT 58.885 45.455 0.00 0.00 37.89 2.12
3662 4301 2.546899 AGTTCACTGCCCCATGTAGTA 58.453 47.619 0.00 0.00 37.89 1.82
3663 4302 1.362224 AGTTCACTGCCCCATGTAGT 58.638 50.000 0.00 0.00 40.97 2.73
3664 4303 2.086869 CAAGTTCACTGCCCCATGTAG 58.913 52.381 0.00 0.00 0.00 2.74
3665 4304 1.423541 ACAAGTTCACTGCCCCATGTA 59.576 47.619 0.00 0.00 0.00 2.29
3666 4305 0.185901 ACAAGTTCACTGCCCCATGT 59.814 50.000 0.00 0.00 0.00 3.21
3667 4306 0.883833 GACAAGTTCACTGCCCCATG 59.116 55.000 0.00 0.00 0.00 3.66
3668 4307 0.606401 CGACAAGTTCACTGCCCCAT 60.606 55.000 0.00 0.00 0.00 4.00
3669 4308 1.227823 CGACAAGTTCACTGCCCCA 60.228 57.895 0.00 0.00 0.00 4.96
3670 4309 0.534203 TTCGACAAGTTCACTGCCCC 60.534 55.000 0.00 0.00 0.00 5.80
3671 4310 0.586802 GTTCGACAAGTTCACTGCCC 59.413 55.000 0.00 0.00 0.00 5.36
3672 4311 0.586802 GGTTCGACAAGTTCACTGCC 59.413 55.000 0.00 0.00 0.00 4.85
3673 4312 1.295792 TGGTTCGACAAGTTCACTGC 58.704 50.000 0.00 0.00 0.00 4.40
3674 4313 3.559655 TGAATGGTTCGACAAGTTCACTG 59.440 43.478 0.00 0.00 0.00 3.66
3675 4314 3.804036 TGAATGGTTCGACAAGTTCACT 58.196 40.909 0.00 0.00 0.00 3.41
3676 4315 4.035208 AGTTGAATGGTTCGACAAGTTCAC 59.965 41.667 11.49 0.00 44.82 3.18
3677 4316 4.196193 AGTTGAATGGTTCGACAAGTTCA 58.804 39.130 11.49 0.00 44.82 3.18
3678 4317 4.813296 AGTTGAATGGTTCGACAAGTTC 57.187 40.909 11.49 0.00 44.82 3.01
3679 4318 9.832445 ATATATAGTTGAATGGTTCGACAAGTT 57.168 29.630 11.49 0.00 44.82 2.66
3685 4324 9.366216 GCATGTATATATAGTTGAATGGTTCGA 57.634 33.333 0.00 0.00 0.00 3.71
3686 4325 9.371136 AGCATGTATATATAGTTGAATGGTTCG 57.629 33.333 0.00 0.00 0.00 3.95
3688 4327 8.950210 GCAGCATGTATATATAGTTGAATGGTT 58.050 33.333 0.00 0.00 39.31 3.67
3689 4328 8.102676 TGCAGCATGTATATATAGTTGAATGGT 58.897 33.333 0.00 0.00 39.31 3.55
3690 4329 8.496707 TGCAGCATGTATATATAGTTGAATGG 57.503 34.615 0.00 0.00 39.31 3.16
3693 4332 8.872845 CGATTGCAGCATGTATATATAGTTGAA 58.127 33.333 0.00 0.00 39.31 2.69
3694 4333 8.034804 ACGATTGCAGCATGTATATATAGTTGA 58.965 33.333 0.00 0.00 39.31 3.18
3695 4334 8.189709 ACGATTGCAGCATGTATATATAGTTG 57.810 34.615 0.00 0.00 39.31 3.16
3696 4335 7.220875 CGACGATTGCAGCATGTATATATAGTT 59.779 37.037 0.00 0.00 39.31 2.24
3697 4336 6.693113 CGACGATTGCAGCATGTATATATAGT 59.307 38.462 0.00 0.00 39.31 2.12
3698 4337 6.345329 GCGACGATTGCAGCATGTATATATAG 60.345 42.308 0.00 0.00 39.31 1.31
3699 4338 5.458779 GCGACGATTGCAGCATGTATATATA 59.541 40.000 0.00 0.00 39.31 0.86
3700 4339 4.268644 GCGACGATTGCAGCATGTATATAT 59.731 41.667 0.00 0.00 39.31 0.86
3701 4340 3.612423 GCGACGATTGCAGCATGTATATA 59.388 43.478 0.00 0.00 39.31 0.86
3702 4341 2.413112 GCGACGATTGCAGCATGTATAT 59.587 45.455 0.00 0.00 39.31 0.86
3703 4342 1.792367 GCGACGATTGCAGCATGTATA 59.208 47.619 0.00 0.00 39.31 1.47
3704 4343 0.583438 GCGACGATTGCAGCATGTAT 59.417 50.000 0.00 0.00 39.31 2.29
3705 4344 1.428370 GGCGACGATTGCAGCATGTA 61.428 55.000 0.00 0.00 39.31 2.29
3706 4345 2.753966 GGCGACGATTGCAGCATGT 61.754 57.895 0.00 0.00 39.31 3.21
3707 4346 2.023741 GGCGACGATTGCAGCATG 59.976 61.111 0.00 0.00 40.87 4.06
3708 4347 0.532640 TATGGCGACGATTGCAGCAT 60.533 50.000 0.00 0.00 0.00 3.79
3709 4348 0.532640 ATATGGCGACGATTGCAGCA 60.533 50.000 0.00 0.00 0.00 4.41
3710 4349 0.588252 AATATGGCGACGATTGCAGC 59.412 50.000 0.00 0.00 0.00 5.25
3711 4350 1.866601 TGAATATGGCGACGATTGCAG 59.133 47.619 0.00 0.00 0.00 4.41
3712 4351 1.946745 TGAATATGGCGACGATTGCA 58.053 45.000 0.00 0.00 0.00 4.08


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.