Multiple sequence alignment - TraesCS4A01G493900

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G493900 chr4A 100.000 5495 0 0 1 5495 742162086 742156592 0.000000e+00 10148.0
1 TraesCS4A01G493900 chr4A 85.047 3638 465 54 945 4535 739605542 739609147 0.000000e+00 3631.0
2 TraesCS4A01G493900 chr4A 86.472 2735 314 32 1206 3901 740150804 740148087 0.000000e+00 2950.0
3 TraesCS4A01G493900 chr4A 87.038 2137 261 12 2391 4516 741422002 741424133 0.000000e+00 2398.0
4 TraesCS4A01G493900 chr4A 85.644 2034 260 28 2335 4349 742021129 742023149 0.000000e+00 2109.0
5 TraesCS4A01G493900 chr4A 83.084 2276 323 43 2103 4349 740122932 740120690 0.000000e+00 2013.0
6 TraesCS4A01G493900 chr4A 84.235 1903 260 22 2479 4349 739886473 739888367 0.000000e+00 1816.0
7 TraesCS4A01G493900 chr4A 82.935 1254 190 22 3109 4349 741805169 741806411 0.000000e+00 1109.0
8 TraesCS4A01G493900 chr4A 84.201 1057 128 23 998 2021 740124019 740122969 0.000000e+00 990.0
9 TraesCS4A01G493900 chr4A 85.790 943 112 15 937 1861 742019746 742020684 0.000000e+00 979.0
10 TraesCS4A01G493900 chr4A 83.824 544 65 13 4646 5175 741424258 741424792 3.820000e-136 496.0
11 TraesCS4A01G493900 chr4A 86.503 326 27 6 223 532 740492616 740492940 5.270000e-90 342.0
12 TraesCS4A01G493900 chr4A 90.385 156 10 4 223 375 740494010 740494163 3.360000e-47 200.0
13 TraesCS4A01G493900 chr4A 88.194 144 13 3 223 362 739604839 739604982 9.470000e-38 169.0
14 TraesCS4A01G493900 chr4A 87.591 137 13 3 1 137 739604547 739604679 7.370000e-34 156.0
15 TraesCS4A01G493900 chr4A 87.597 129 13 2 1 126 739983392 739983264 4.440000e-31 147.0
16 TraesCS4A01G493900 chr4A 82.609 161 13 4 142 287 740151894 740151734 1.610000e-25 128.0
17 TraesCS4A01G493900 chr4A 88.462 104 5 2 319 415 739982968 739982865 9.670000e-23 119.0
18 TraesCS4A01G493900 chr4A 86.905 84 11 0 142 225 740493888 740493971 1.630000e-15 95.3
19 TraesCS4A01G493900 chr4A 94.340 53 3 0 142 194 739604711 739604763 1.270000e-11 82.4
20 TraesCS4A01G493900 chr4A 100.000 36 0 0 4579 4614 117281271 117281306 3.550000e-07 67.6
21 TraesCS4A01G493900 chr7A 84.676 3439 443 59 963 4349 3844191 3840785 0.000000e+00 3354.0
22 TraesCS4A01G493900 chr7A 84.556 2059 296 19 2302 4346 3154751 3152701 0.000000e+00 2021.0
23 TraesCS4A01G493900 chr7A 80.713 954 180 4 982 1934 3156012 3155062 0.000000e+00 739.0
24 TraesCS4A01G493900 chr7A 81.798 890 150 12 982 1866 2805903 2805021 0.000000e+00 736.0
25 TraesCS4A01G493900 chr7A 80.876 936 176 3 982 1916 2688417 2687484 0.000000e+00 734.0
26 TraesCS4A01G493900 chr7A 86.977 215 19 6 5282 5495 3152214 3152008 3.310000e-57 233.0
27 TraesCS4A01G493900 chr7D 81.647 3400 555 53 982 4346 3552637 3549272 0.000000e+00 2758.0
28 TraesCS4A01G493900 chr7D 81.143 3516 588 63 980 4453 2904911 2901429 0.000000e+00 2750.0
29 TraesCS4A01G493900 chr7D 83.397 2620 350 61 1900 4478 4009766 4007191 0.000000e+00 2350.0
30 TraesCS4A01G493900 chr7D 88.348 884 100 3 979 1861 4010594 4009713 0.000000e+00 1059.0
31 TraesCS4A01G493900 chr7D 84.722 504 74 3 3851 4353 3422230 3421729 8.220000e-138 501.0
32 TraesCS4A01G493900 chr7D 77.726 862 115 53 4667 5477 3548970 3548135 1.800000e-124 457.0
33 TraesCS4A01G493900 chr7D 79.157 451 63 19 4779 5211 2901421 2900984 3.240000e-72 283.0
34 TraesCS4A01G493900 chr7D 94.656 131 7 0 5268 5398 2900654 2900524 2.600000e-48 204.0
35 TraesCS4A01G493900 chr1D 95.833 72 3 0 5272 5343 464798689 464798760 3.480000e-22 117.0
36 TraesCS4A01G493900 chr1D 100.000 32 0 0 4579 4610 60318734 60318703 5.940000e-05 60.2
37 TraesCS4A01G493900 chr4B 95.556 45 2 0 4579 4623 611855336 611855380 7.640000e-09 73.1
38 TraesCS4A01G493900 chr4D 90.385 52 5 0 4573 4624 482160686 482160737 9.880000e-08 69.4
39 TraesCS4A01G493900 chr3D 87.719 57 7 0 4582 4638 400786219 400786163 3.550000e-07 67.6
40 TraesCS4A01G493900 chr2A 92.683 41 3 0 4582 4622 45481621 45481581 5.940000e-05 60.2
41 TraesCS4A01G493900 chr6D 100.000 31 0 0 4584 4614 423172900 423172930 2.140000e-04 58.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G493900 chr4A 742156592 742162086 5494 True 10148.000000 10148 100.000000 1 5495 1 chr4A.!!$R1 5494
1 TraesCS4A01G493900 chr4A 739886473 739888367 1894 False 1816.000000 1816 84.235000 2479 4349 1 chr4A.!!$F2 1870
2 TraesCS4A01G493900 chr4A 742019746 742023149 3403 False 1544.000000 2109 85.717000 937 4349 2 chr4A.!!$F7 3412
3 TraesCS4A01G493900 chr4A 740148087 740151894 3807 True 1539.000000 2950 84.540500 142 3901 2 chr4A.!!$R4 3759
4 TraesCS4A01G493900 chr4A 740120690 740124019 3329 True 1501.500000 2013 83.642500 998 4349 2 chr4A.!!$R3 3351
5 TraesCS4A01G493900 chr4A 741422002 741424792 2790 False 1447.000000 2398 85.431000 2391 5175 2 chr4A.!!$F6 2784
6 TraesCS4A01G493900 chr4A 741805169 741806411 1242 False 1109.000000 1109 82.935000 3109 4349 1 chr4A.!!$F3 1240
7 TraesCS4A01G493900 chr4A 739604547 739609147 4600 False 1009.600000 3631 88.793000 1 4535 4 chr4A.!!$F4 4534
8 TraesCS4A01G493900 chr4A 740492616 740494163 1547 False 212.433333 342 87.931000 142 532 3 chr4A.!!$F5 390
9 TraesCS4A01G493900 chr7A 3840785 3844191 3406 True 3354.000000 3354 84.676000 963 4349 1 chr7A.!!$R3 3386
10 TraesCS4A01G493900 chr7A 3152008 3156012 4004 True 997.666667 2021 84.082000 982 5495 3 chr7A.!!$R4 4513
11 TraesCS4A01G493900 chr7A 2805021 2805903 882 True 736.000000 736 81.798000 982 1866 1 chr7A.!!$R2 884
12 TraesCS4A01G493900 chr7A 2687484 2688417 933 True 734.000000 734 80.876000 982 1916 1 chr7A.!!$R1 934
13 TraesCS4A01G493900 chr7D 4007191 4010594 3403 True 1704.500000 2350 85.872500 979 4478 2 chr7D.!!$R4 3499
14 TraesCS4A01G493900 chr7D 3548135 3552637 4502 True 1607.500000 2758 79.686500 982 5477 2 chr7D.!!$R3 4495
15 TraesCS4A01G493900 chr7D 2900524 2904911 4387 True 1079.000000 2750 84.985333 980 5398 3 chr7D.!!$R2 4418
16 TraesCS4A01G493900 chr7D 3421729 3422230 501 True 501.000000 501 84.722000 3851 4353 1 chr7D.!!$R1 502

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
396 1579 0.108281 GGGGTCTTGGTCGCTTACTC 60.108 60.0 0.00 0.00 0.00 2.59 F
1149 2723 0.178068 ATGCTGCCCTACGTAAGGTG 59.822 55.0 11.81 6.55 44.90 4.00 F
2055 3778 0.964700 TAGATGCCCTCTCATCGCTG 59.035 55.0 0.00 0.00 45.57 5.18 F
2810 4584 0.682852 TGTCGGTAAACCTGTGGAGG 59.317 55.0 0.00 0.00 46.21 4.30 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2042 3765 0.036952 ACACAACAGCGATGAGAGGG 60.037 55.000 8.12 0.0 0.00 4.30 R
2587 4361 2.190981 GTGGCAACTTCGAGTATACGG 58.809 52.381 0.00 0.0 37.61 4.02 R
3752 5550 0.179215 GCATTCCTTTCGCTGTCACG 60.179 55.000 0.00 0.0 0.00 4.35 R
4503 6438 0.391966 GTAGTTGGAGATACCCGGCC 59.608 60.000 0.00 0.0 38.00 6.13 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
106 107 2.450609 AGTTAACCTTGCGTCGATGT 57.549 45.000 6.48 0.00 0.00 3.06
113 114 1.061131 CCTTGCGTCGATGTTGCTAAG 59.939 52.381 6.48 6.76 0.00 2.18
126 127 3.217626 GTTGCTAAGAGGGCATGCTTAT 58.782 45.455 18.92 3.37 39.54 1.73
142 143 6.484643 GCATGCTTATCTCTCCAGATTGTTTA 59.515 38.462 11.37 0.00 40.18 2.01
151 1283 5.930135 TCTCCAGATTGTTTAATAGGAGGC 58.070 41.667 15.28 0.00 42.85 4.70
203 1341 2.210116 AGCTTCGCTTCTCGTTCAAAA 58.790 42.857 0.00 0.00 33.89 2.44
209 1347 2.223144 CGCTTCTCGTTCAAAATGGTGA 59.777 45.455 0.00 0.00 0.00 4.02
289 1470 5.788450 AGCTCACAATATATGTACAGCCTC 58.212 41.667 0.33 0.00 43.50 4.70
291 1472 5.866633 GCTCACAATATATGTACAGCCTCTC 59.133 44.000 0.33 0.00 41.46 3.20
292 1473 6.517362 GCTCACAATATATGTACAGCCTCTCA 60.517 42.308 0.33 0.00 41.46 3.27
295 1476 5.541868 ACAATATATGTACAGCCTCTCAGCT 59.458 40.000 0.33 0.00 42.11 4.24
303 1484 2.305343 ACAGCCTCTCAGCTTCTTCAAT 59.695 45.455 0.00 0.00 42.61 2.57
314 1496 4.637977 CAGCTTCTTCAATAGGGAGAAACC 59.362 45.833 0.00 0.00 38.08 3.27
375 1558 6.475076 TGGTTCATTTGTTTTGAAGATCAACG 59.525 34.615 0.00 0.00 35.89 4.10
376 1559 6.074356 GGTTCATTTGTTTTGAAGATCAACGG 60.074 38.462 0.00 0.00 35.89 4.44
377 1560 5.527951 TCATTTGTTTTGAAGATCAACGGG 58.472 37.500 0.00 0.00 35.89 5.28
378 1561 4.314740 TTTGTTTTGAAGATCAACGGGG 57.685 40.909 0.00 0.00 35.89 5.73
379 1562 2.235016 TGTTTTGAAGATCAACGGGGG 58.765 47.619 0.00 0.00 35.89 5.40
393 1576 3.395630 GGGGGTCTTGGTCGCTTA 58.604 61.111 0.00 0.00 0.00 3.09
394 1577 1.078637 GGGGGTCTTGGTCGCTTAC 60.079 63.158 0.00 0.00 0.00 2.34
395 1578 1.551019 GGGGGTCTTGGTCGCTTACT 61.551 60.000 0.00 0.00 0.00 2.24
396 1579 0.108281 GGGGTCTTGGTCGCTTACTC 60.108 60.000 0.00 0.00 0.00 2.59
397 1580 0.458025 GGGTCTTGGTCGCTTACTCG 60.458 60.000 0.00 0.00 0.00 4.18
398 1581 0.243095 GGTCTTGGTCGCTTACTCGT 59.757 55.000 0.00 0.00 0.00 4.18
399 1582 1.470098 GGTCTTGGTCGCTTACTCGTA 59.530 52.381 0.00 0.00 0.00 3.43
400 1583 2.513893 GTCTTGGTCGCTTACTCGTAC 58.486 52.381 0.00 0.00 0.00 3.67
401 1584 2.095567 GTCTTGGTCGCTTACTCGTACA 60.096 50.000 0.00 0.00 0.00 2.90
402 1585 2.751259 TCTTGGTCGCTTACTCGTACAT 59.249 45.455 0.00 0.00 0.00 2.29
403 1586 2.554806 TGGTCGCTTACTCGTACATG 57.445 50.000 0.00 0.00 0.00 3.21
404 1587 1.814394 TGGTCGCTTACTCGTACATGT 59.186 47.619 2.69 2.69 0.00 3.21
405 1588 3.009026 TGGTCGCTTACTCGTACATGTA 58.991 45.455 0.08 0.08 0.00 2.29
406 1589 3.628942 TGGTCGCTTACTCGTACATGTAT 59.371 43.478 9.18 0.00 0.00 2.29
407 1590 4.815846 TGGTCGCTTACTCGTACATGTATA 59.184 41.667 9.18 0.00 0.00 1.47
408 1591 5.471116 TGGTCGCTTACTCGTACATGTATAT 59.529 40.000 9.18 0.00 0.00 0.86
409 1592 5.793952 GGTCGCTTACTCGTACATGTATATG 59.206 44.000 9.18 4.81 40.24 1.78
410 1593 5.283247 GTCGCTTACTCGTACATGTATATGC 59.717 44.000 9.18 9.77 37.85 3.14
411 1594 5.049267 TCGCTTACTCGTACATGTATATGCA 60.049 40.000 9.18 0.00 37.85 3.96
412 1595 5.800438 CGCTTACTCGTACATGTATATGCAT 59.200 40.000 9.18 3.79 37.85 3.96
413 1596 6.964934 CGCTTACTCGTACATGTATATGCATA 59.035 38.462 9.27 9.27 37.85 3.14
414 1597 7.644157 CGCTTACTCGTACATGTATATGCATAT 59.356 37.037 22.31 22.31 37.85 1.78
415 1598 9.946165 GCTTACTCGTACATGTATATGCATATA 57.054 33.333 20.25 20.25 37.85 0.86
418 1601 8.288689 ACTCGTACATGTATATGCATATACCA 57.711 34.615 36.75 28.59 42.70 3.25
419 1602 8.914011 ACTCGTACATGTATATGCATATACCAT 58.086 33.333 36.75 29.18 42.70 3.55
420 1603 9.185192 CTCGTACATGTATATGCATATACCATG 57.815 37.037 36.75 35.12 42.70 3.66
421 1604 8.691797 TCGTACATGTATATGCATATACCATGT 58.308 33.333 37.31 37.31 42.70 3.21
422 1605 8.968242 CGTACATGTATATGCATATACCATGTC 58.032 37.037 38.15 32.18 42.70 3.06
423 1606 9.816354 GTACATGTATATGCATATACCATGTCA 57.184 33.333 38.15 30.08 42.70 3.58
425 1608 9.551734 ACATGTATATGCATATACCATGTCATC 57.448 33.333 34.68 21.59 42.70 2.92
426 1609 9.774413 CATGTATATGCATATACCATGTCATCT 57.226 33.333 36.75 17.46 42.70 2.90
431 1614 6.686484 TGCATATACCATGTCATCTAACCT 57.314 37.500 0.00 0.00 0.00 3.50
432 1615 6.466812 TGCATATACCATGTCATCTAACCTG 58.533 40.000 0.00 0.00 0.00 4.00
433 1616 5.352569 GCATATACCATGTCATCTAACCTGC 59.647 44.000 0.00 0.00 0.00 4.85
434 1617 6.705302 CATATACCATGTCATCTAACCTGCT 58.295 40.000 0.00 0.00 0.00 4.24
435 1618 5.636903 ATACCATGTCATCTAACCTGCTT 57.363 39.130 0.00 0.00 0.00 3.91
436 1619 3.878778 ACCATGTCATCTAACCTGCTTC 58.121 45.455 0.00 0.00 0.00 3.86
437 1620 3.264193 ACCATGTCATCTAACCTGCTTCA 59.736 43.478 0.00 0.00 0.00 3.02
438 1621 4.263462 ACCATGTCATCTAACCTGCTTCAA 60.263 41.667 0.00 0.00 0.00 2.69
439 1622 4.334759 CCATGTCATCTAACCTGCTTCAAG 59.665 45.833 0.00 0.00 0.00 3.02
440 1623 3.942829 TGTCATCTAACCTGCTTCAAGG 58.057 45.455 0.00 0.00 43.57 3.61
441 1624 3.582647 TGTCATCTAACCTGCTTCAAGGA 59.417 43.478 0.00 0.00 40.02 3.36
442 1625 4.225942 TGTCATCTAACCTGCTTCAAGGAT 59.774 41.667 0.00 0.00 40.02 3.24
443 1626 5.189180 GTCATCTAACCTGCTTCAAGGATT 58.811 41.667 0.00 0.00 40.02 3.01
469 1652 5.873732 GTAGAGAACCATGCTTGATGAAAC 58.126 41.667 0.22 0.00 33.31 2.78
470 1653 3.760684 AGAGAACCATGCTTGATGAAACC 59.239 43.478 0.22 0.00 33.31 3.27
471 1654 3.499338 AGAACCATGCTTGATGAAACCA 58.501 40.909 0.22 0.00 33.31 3.67
472 1655 3.256631 AGAACCATGCTTGATGAAACCAC 59.743 43.478 0.22 0.00 33.31 4.16
473 1656 2.596346 ACCATGCTTGATGAAACCACA 58.404 42.857 0.22 0.00 33.31 4.17
474 1657 3.167485 ACCATGCTTGATGAAACCACAT 58.833 40.909 0.22 0.00 33.31 3.21
475 1658 4.343231 ACCATGCTTGATGAAACCACATA 58.657 39.130 0.22 0.00 33.31 2.29
476 1659 4.957954 ACCATGCTTGATGAAACCACATAT 59.042 37.500 0.22 0.00 33.31 1.78
477 1660 5.163488 ACCATGCTTGATGAAACCACATATG 60.163 40.000 0.00 0.00 33.31 1.78
478 1661 5.163488 CCATGCTTGATGAAACCACATATGT 60.163 40.000 1.41 1.41 33.31 2.29
482 1665 6.039605 TGCTTGATGAAACCACATATGTATGG 59.960 38.462 8.32 9.39 42.13 2.74
500 1683 7.809546 TGTATGGTGAGTTAGTATGAGAGAG 57.190 40.000 0.00 0.00 0.00 3.20
501 1684 7.574607 TGTATGGTGAGTTAGTATGAGAGAGA 58.425 38.462 0.00 0.00 0.00 3.10
514 1697 8.484214 AGTATGAGAGAGAAATATGCCTACAA 57.516 34.615 0.00 0.00 0.00 2.41
516 1699 9.547753 GTATGAGAGAGAAATATGCCTACAAAA 57.452 33.333 0.00 0.00 0.00 2.44
519 1702 8.896744 TGAGAGAGAAATATGCCTACAAAAATG 58.103 33.333 0.00 0.00 0.00 2.32
521 1704 9.247861 AGAGAGAAATATGCCTACAAAAATGTT 57.752 29.630 0.00 0.00 0.00 2.71
589 1776 3.675467 AACACAAGAGAACTTCGCAAC 57.325 42.857 0.00 0.00 33.70 4.17
590 1777 2.627945 ACACAAGAGAACTTCGCAACA 58.372 42.857 0.00 0.00 33.70 3.33
591 1778 2.351726 ACACAAGAGAACTTCGCAACAC 59.648 45.455 0.00 0.00 33.70 3.32
604 1791 3.894920 TCGCAACACAAATGTAATGGTG 58.105 40.909 0.00 0.00 38.45 4.17
620 1807 2.942804 TGGTGCTTCTTCCATTGTCAA 58.057 42.857 0.00 0.00 0.00 3.18
621 1808 3.295093 TGGTGCTTCTTCCATTGTCAAA 58.705 40.909 0.00 0.00 0.00 2.69
624 1811 5.163322 TGGTGCTTCTTCCATTGTCAAAATT 60.163 36.000 0.00 0.00 0.00 1.82
626 1813 6.260714 GGTGCTTCTTCCATTGTCAAAATTTT 59.739 34.615 0.00 0.00 0.00 1.82
629 1816 9.044150 TGCTTCTTCCATTGTCAAAATTTTTAG 57.956 29.630 0.00 0.00 0.00 1.85
630 1817 8.498358 GCTTCTTCCATTGTCAAAATTTTTAGG 58.502 33.333 0.00 0.00 0.00 2.69
631 1818 8.900983 TTCTTCCATTGTCAAAATTTTTAGGG 57.099 30.769 0.00 0.00 0.00 3.53
632 1819 6.934083 TCTTCCATTGTCAAAATTTTTAGGGC 59.066 34.615 0.00 0.00 0.00 5.19
633 1820 6.179906 TCCATTGTCAAAATTTTTAGGGCA 57.820 33.333 0.00 0.00 0.00 5.36
634 1821 6.229733 TCCATTGTCAAAATTTTTAGGGCAG 58.770 36.000 0.00 0.00 0.00 4.85
640 1862 8.825667 TGTCAAAATTTTTAGGGCAGATTTAC 57.174 30.769 0.00 0.00 0.00 2.01
674 1896 8.439971 TGATAACCATTAAGCCTTGATAGACAT 58.560 33.333 0.00 0.00 0.00 3.06
685 1907 6.042437 AGCCTTGATAGACATCACATGTATGA 59.958 38.462 17.00 5.59 45.03 2.15
701 1923 5.900865 TGTATGAACGTAGTACCATGTGA 57.099 39.130 0.00 0.00 45.00 3.58
703 1925 6.869695 TGTATGAACGTAGTACCATGTGAAT 58.130 36.000 0.00 0.00 45.00 2.57
723 2006 7.540400 TGTGAATTTAATAACATGGTCAAAGCG 59.460 33.333 0.00 0.00 0.00 4.68
726 2009 8.905103 AATTTAATAACATGGTCAAAGCGTAC 57.095 30.769 0.00 0.00 0.00 3.67
732 2015 2.552599 TGGTCAAAGCGTACATCCAA 57.447 45.000 0.00 0.00 0.00 3.53
741 2024 4.119442 AGCGTACATCCAAACGATTAGT 57.881 40.909 0.00 0.00 41.55 2.24
754 2037 5.643379 AACGATTAGTTGAACCAATGCAT 57.357 34.783 0.00 0.00 42.39 3.96
774 2057 1.339920 TGGTGTACCATGTGCATCTGG 60.340 52.381 14.18 14.18 42.01 3.86
783 2069 2.495155 TGTGCATCTGGTACATGCTT 57.505 45.000 15.33 0.00 45.90 3.91
784 2070 2.794103 TGTGCATCTGGTACATGCTTT 58.206 42.857 15.33 0.00 45.90 3.51
785 2071 3.949132 TGTGCATCTGGTACATGCTTTA 58.051 40.909 15.33 2.54 45.90 1.85
786 2072 3.940852 TGTGCATCTGGTACATGCTTTAG 59.059 43.478 15.33 0.00 45.90 1.85
789 2075 2.710096 TCTGGTACATGCTTTAGGCC 57.290 50.000 0.00 0.00 38.20 5.19
790 2076 2.196595 TCTGGTACATGCTTTAGGCCT 58.803 47.619 11.78 11.78 38.20 5.19
791 2077 2.170607 TCTGGTACATGCTTTAGGCCTC 59.829 50.000 9.68 0.00 38.20 4.70
792 2078 1.211949 TGGTACATGCTTTAGGCCTCC 59.788 52.381 9.68 0.00 40.92 4.30
793 2079 1.490910 GGTACATGCTTTAGGCCTCCT 59.509 52.381 9.68 0.00 40.92 3.69
794 2080 2.704065 GGTACATGCTTTAGGCCTCCTA 59.296 50.000 9.68 0.00 40.92 2.94
795 2081 3.328050 GGTACATGCTTTAGGCCTCCTAT 59.672 47.826 9.68 0.00 35.87 2.57
796 2082 4.530946 GGTACATGCTTTAGGCCTCCTATA 59.469 45.833 9.68 0.00 35.87 1.31
797 2083 5.012768 GGTACATGCTTTAGGCCTCCTATAA 59.987 44.000 9.68 0.00 35.87 0.98
798 2084 5.646692 ACATGCTTTAGGCCTCCTATAAA 57.353 39.130 9.68 2.33 35.87 1.40
800 2086 6.431722 ACATGCTTTAGGCCTCCTATAAAAA 58.568 36.000 9.68 0.57 35.87 1.94
825 2112 7.510675 AGGGAAGTGGAAAAACTATATGAGA 57.489 36.000 0.00 0.00 0.00 3.27
826 2113 7.928873 AGGGAAGTGGAAAAACTATATGAGAA 58.071 34.615 0.00 0.00 0.00 2.87
827 2114 8.560903 AGGGAAGTGGAAAAACTATATGAGAAT 58.439 33.333 0.00 0.00 0.00 2.40
828 2115 9.847224 GGGAAGTGGAAAAACTATATGAGAATA 57.153 33.333 0.00 0.00 0.00 1.75
852 2139 7.163001 ACCTATTTGATTTCAAGAAAGGAGC 57.837 36.000 17.51 0.00 37.15 4.70
853 2140 6.721208 ACCTATTTGATTTCAAGAAAGGAGCA 59.279 34.615 17.51 0.00 37.15 4.26
854 2141 7.233348 ACCTATTTGATTTCAAGAAAGGAGCAA 59.767 33.333 17.51 1.48 37.15 3.91
855 2142 8.090214 CCTATTTGATTTCAAGAAAGGAGCAAA 58.910 33.333 10.06 13.09 37.15 3.68
856 2143 7.958053 ATTTGATTTCAAGAAAGGAGCAAAG 57.042 32.000 14.66 0.00 37.15 2.77
857 2144 6.469782 TTGATTTCAAGAAAGGAGCAAAGT 57.530 33.333 1.48 0.00 33.32 2.66
858 2145 6.469782 TGATTTCAAGAAAGGAGCAAAGTT 57.530 33.333 1.48 0.00 33.32 2.66
859 2146 7.581213 TGATTTCAAGAAAGGAGCAAAGTTA 57.419 32.000 1.48 0.00 33.32 2.24
860 2147 7.425606 TGATTTCAAGAAAGGAGCAAAGTTAC 58.574 34.615 1.48 0.00 33.32 2.50
865 2152 7.871853 TCAAGAAAGGAGCAAAGTTACAATAC 58.128 34.615 0.00 0.00 0.00 1.89
870 2157 7.440523 AAGGAGCAAAGTTACAATACAAGAG 57.559 36.000 0.00 0.00 0.00 2.85
877 2164 8.958043 GCAAAGTTACAATACAAGAGAAGTTTG 58.042 33.333 0.00 0.00 38.96 2.93
894 2181 8.230472 AGAAGTTTGTTTGATCTCAGTTTCAT 57.770 30.769 0.00 0.00 0.00 2.57
898 2185 9.956720 AGTTTGTTTGATCTCAGTTTCATTTAG 57.043 29.630 0.00 0.00 0.00 1.85
899 2186 9.950680 GTTTGTTTGATCTCAGTTTCATTTAGA 57.049 29.630 0.00 0.00 0.00 2.10
925 2220 4.530710 ACTATAAAGACCAGCGTGTGAA 57.469 40.909 0.00 0.00 0.00 3.18
935 2230 2.668457 CCAGCGTGTGAAGACATAACTC 59.332 50.000 0.00 0.00 33.63 3.01
936 2231 2.668457 CAGCGTGTGAAGACATAACTCC 59.332 50.000 0.00 0.00 33.63 3.85
958 2530 2.288763 CCCCACCACACAAAAGCATTAC 60.289 50.000 0.00 0.00 0.00 1.89
974 2546 4.793071 GCATTACTGTGCACAAACATACA 58.207 39.130 21.98 1.08 44.43 2.29
975 2547 5.218885 GCATTACTGTGCACAAACATACAA 58.781 37.500 21.98 7.32 44.43 2.41
976 2548 5.343058 GCATTACTGTGCACAAACATACAAG 59.657 40.000 21.98 8.18 44.43 3.16
977 2549 6.667370 CATTACTGTGCACAAACATACAAGA 58.333 36.000 21.98 0.00 0.00 3.02
993 2566 3.886123 ACAAGACAACCAGCTGTTAAGT 58.114 40.909 13.81 5.50 34.69 2.24
1082 2656 1.270839 GGAGTACAAGCTGCAGACCAA 60.271 52.381 20.43 0.00 0.00 3.67
1143 2717 3.686622 CATGTATGCTGCCCTACGT 57.313 52.632 0.00 0.00 0.00 3.57
1149 2723 0.178068 ATGCTGCCCTACGTAAGGTG 59.822 55.000 11.81 6.55 44.90 4.00
1179 2753 2.502080 CGTGACCAGCTCGACGAC 60.502 66.667 0.00 0.00 35.64 4.34
1183 2757 3.973267 GACCAGCTCGACGACCAGC 62.973 68.421 0.00 0.00 35.73 4.85
1332 2996 2.887151 AGATGGGGAACTTGTTCAGG 57.113 50.000 14.38 0.00 0.00 3.86
1337 3001 2.512056 TGGGGAACTTGTTCAGGAAGAA 59.488 45.455 14.38 0.00 0.00 2.52
1382 3046 4.510711 CGATGAGATCAAAGACATCAAGGG 59.489 45.833 0.00 0.00 38.99 3.95
1404 3068 1.004560 CGTCAAGGAGGCAGCTGAA 60.005 57.895 20.43 0.00 0.00 3.02
1420 3084 2.097142 GCTGAACGACGTGATAGGTACT 59.903 50.000 0.00 0.00 46.37 2.73
1453 3117 2.890945 GTGGTTGTTAATCCAGTTGGCT 59.109 45.455 0.00 0.00 34.16 4.75
1460 3124 5.076182 TGTTAATCCAGTTGGCTCAATCAA 58.924 37.500 0.00 0.00 34.44 2.57
1507 3171 4.591498 TGTACAAGGACCAGAAAGAGCTTA 59.409 41.667 0.00 0.00 0.00 3.09
1539 3203 8.515695 TTGATGATTCATTGAATGAGCTAACT 57.484 30.769 16.41 0.00 40.94 2.24
1549 3213 9.053840 CATTGAATGAGCTAACTAAGATGATGT 57.946 33.333 0.00 0.00 0.00 3.06
1557 3221 6.098838 AGCTAACTAAGATGATGTGTGATGGA 59.901 38.462 0.00 0.00 0.00 3.41
1571 3235 1.224075 GATGGAGATGGTGATGCGTG 58.776 55.000 0.00 0.00 0.00 5.34
1602 3266 7.045126 ACTGAAGATACTCTCTATTTTCGGG 57.955 40.000 0.00 0.00 32.10 5.14
1657 3321 6.428385 AAGCAGTGTATGATAAGCTCAAAC 57.572 37.500 0.00 0.00 37.44 2.93
1707 3371 1.133668 GTAGGACGGAACCCTAGCCTA 60.134 57.143 0.00 0.00 36.98 3.93
1710 3374 1.556451 GGACGGAACCCTAGCCTAAAA 59.444 52.381 0.00 0.00 0.00 1.52
1741 3406 8.048534 TCTCAATGACATTCTCTTTGGAATTC 57.951 34.615 0.00 0.00 35.60 2.17
1756 3436 8.744652 TCTTTGGAATTCACAAGAAAAAGTACA 58.255 29.630 13.52 0.00 37.29 2.90
1774 3454 1.271379 ACACGGAGTTGGATGAAAGGG 60.271 52.381 0.00 0.00 41.61 3.95
1796 3476 1.135373 GCTGATCGACAAACTCCGAGA 60.135 52.381 1.33 0.00 38.25 4.04
1822 3502 7.759489 TTACTTGAGAACAAAAGGTATGCAT 57.241 32.000 3.79 3.79 35.49 3.96
1898 3588 2.036346 GGCAGCCAATTGTTGAACTCTT 59.964 45.455 6.55 0.00 0.00 2.85
1987 3704 4.574013 GCGTCAATCCTGAGAAGAAATGAT 59.426 41.667 0.00 0.00 30.14 2.45
1990 3707 7.201644 GCGTCAATCCTGAGAAGAAATGATTTA 60.202 37.037 0.00 0.00 30.14 1.40
2005 3722 9.917887 AGAAATGATTTAGAGATGAGTGGAAAT 57.082 29.630 0.00 0.00 0.00 2.17
2023 3743 8.482128 AGTGGAAATTTTGGTTTGAGACATTAA 58.518 29.630 0.00 0.00 0.00 1.40
2033 3756 8.934023 TGGTTTGAGACATTAAAAGATAAGGT 57.066 30.769 0.00 0.00 0.00 3.50
2046 3769 7.646548 AAAAGATAAGGTTTTAGATGCCCTC 57.353 36.000 0.00 0.00 0.00 4.30
2052 3775 3.134458 GGTTTTAGATGCCCTCTCATCG 58.866 50.000 0.00 0.00 45.57 3.84
2055 3778 0.964700 TAGATGCCCTCTCATCGCTG 59.035 55.000 0.00 0.00 45.57 5.18
2147 3880 5.302823 ACCTTCTTTGCTATAATTGGATGGC 59.697 40.000 0.00 0.00 34.11 4.40
2162 3895 2.354821 GGATGGCACTTACCGTTGAATC 59.645 50.000 0.00 0.00 0.00 2.52
2166 3904 3.071479 GGCACTTACCGTTGAATCTTCA 58.929 45.455 0.00 0.00 34.92 3.02
2169 3907 4.377431 GCACTTACCGTTGAATCTTCACTG 60.377 45.833 0.00 0.00 36.83 3.66
2177 3917 5.377358 CGTTGAATCTTCACTGATGTTCAC 58.623 41.667 0.00 0.00 36.83 3.18
2185 3925 7.838771 TCTTCACTGATGTTCACATATTCTG 57.161 36.000 0.00 0.00 36.57 3.02
2188 3928 6.343703 TCACTGATGTTCACATATTCTGGAG 58.656 40.000 0.00 0.00 36.57 3.86
2195 3935 5.877012 TGTTCACATATTCTGGAGCTTCTTC 59.123 40.000 0.00 0.00 0.00 2.87
2208 3948 4.096081 GGAGCTTCTTCCAATTGATGTCAG 59.904 45.833 7.12 0.00 37.20 3.51
2291 4038 6.882610 TTCCGGATGATGAAATGGAATTAG 57.117 37.500 4.15 0.00 33.67 1.73
2347 4115 3.026694 CCCTCCATTTCCTGATTCAACC 58.973 50.000 0.00 0.00 0.00 3.77
2364 4132 8.859090 TGATTCAACCATGTCAACTTTAGATTT 58.141 29.630 0.00 0.00 0.00 2.17
2396 4167 4.094830 AGATTGACATGCATGCATCCTA 57.905 40.909 30.07 20.17 33.90 2.94
2427 4200 5.717119 AGATACTTTGAATACTTGGGGCT 57.283 39.130 0.00 0.00 0.00 5.19
2429 4202 3.806949 ACTTTGAATACTTGGGGCTCA 57.193 42.857 0.00 0.00 0.00 4.26
2587 4361 4.816925 GGAAGCAGGATAATCACAACTACC 59.183 45.833 0.00 0.00 0.00 3.18
2633 4407 6.599356 TGACCAGTGAAGTATACAAGCTAA 57.401 37.500 5.50 0.00 0.00 3.09
2702 4476 9.125026 GATTATCTTGTGGTGAAATAGAATGGT 57.875 33.333 0.00 0.00 0.00 3.55
2810 4584 0.682852 TGTCGGTAAACCTGTGGAGG 59.317 55.000 0.00 0.00 46.21 4.30
2965 4739 6.949117 AGCATATATCCTGAAGACCATCTT 57.051 37.500 0.00 0.00 39.87 2.40
3049 4823 4.382147 GGGATAGGACTATTCGAGATTGGC 60.382 50.000 0.00 0.00 0.00 4.52
3055 4829 3.215151 ACTATTCGAGATTGGCGAGAGA 58.785 45.455 0.00 0.00 39.14 3.10
3240 5035 3.570975 ACAACTTCTCATTGCAATGCTCA 59.429 39.130 30.57 15.50 36.36 4.26
3254 5049 2.609427 TGCTCATAGGCTAGCTGTTG 57.391 50.000 15.72 9.57 39.53 3.33
3282 5077 1.619363 TCCAACCCCTGGCTAGCAT 60.619 57.895 18.24 0.00 45.98 3.79
3291 5086 2.355513 CCCTGGCTAGCATATCCACATC 60.356 54.545 18.24 0.00 30.66 3.06
3294 5089 2.289010 TGGCTAGCATATCCACATCACG 60.289 50.000 18.24 0.00 30.66 4.35
3295 5090 2.341257 GCTAGCATATCCACATCACGG 58.659 52.381 10.63 0.00 0.00 4.94
3297 5092 1.131638 AGCATATCCACATCACGGGT 58.868 50.000 0.00 0.00 0.00 5.28
3395 5190 1.929494 TGGAAGGCCCCACTAATTCAT 59.071 47.619 0.00 0.00 0.00 2.57
3396 5191 2.310538 GGAAGGCCCCACTAATTCATG 58.689 52.381 0.00 0.00 0.00 3.07
3440 5238 5.243426 TGTTGGAAAGTTAGTTCACTTGC 57.757 39.130 0.00 0.00 37.07 4.01
3470 5268 2.002505 ACTAGCGAGCATGGGTATCT 57.997 50.000 0.00 0.00 0.00 1.98
3476 5274 1.269988 CGAGCATGGGTATCTGTGAGG 60.270 57.143 0.00 0.00 0.00 3.86
3527 5325 1.353022 TGGTGGTATTGGACTTGGGTC 59.647 52.381 0.00 0.00 41.43 4.46
3560 5358 8.198109 GCATAAGTGAACTTCCAGAGAGTATTA 58.802 37.037 0.00 0.00 37.40 0.98
3565 5363 5.944599 TGAACTTCCAGAGAGTATTAGTCGT 59.055 40.000 0.00 0.00 0.00 4.34
3695 5493 5.585390 AGCAATCAAACTTTGTGACAGAAG 58.415 37.500 1.44 6.14 0.00 2.85
3697 5495 5.807011 GCAATCAAACTTTGTGACAGAAGTT 59.193 36.000 15.27 15.27 45.29 2.66
3721 5519 3.627577 GCAAGTTGACAGAGTTGAGGAAA 59.372 43.478 7.16 0.00 32.84 3.13
3777 5581 0.038166 AGCGAAAGGAATGCTTGGGA 59.962 50.000 0.00 0.00 34.80 4.37
3789 5593 0.827368 GCTTGGGAGGAGTCTGTAGG 59.173 60.000 0.00 0.00 0.00 3.18
3794 5598 4.348020 TGGGAGGAGTCTGTAGGTAAAT 57.652 45.455 0.00 0.00 0.00 1.40
3831 5636 9.687210 CCAAGTCATTGACATTAATCATATTGG 57.313 33.333 18.57 14.03 38.83 3.16
3835 5640 8.570488 GTCATTGACATTAATCATATTGGCTCA 58.430 33.333 11.93 0.00 32.09 4.26
3849 5663 7.449395 TCATATTGGCTCATTTAGAATTCCTGG 59.551 37.037 0.65 0.00 0.00 4.45
3886 5700 1.797211 GACGGTATGCCCTCTCTCCG 61.797 65.000 0.00 0.00 42.94 4.63
3892 5706 1.557269 ATGCCCTCTCTCCGCAACTT 61.557 55.000 0.00 0.00 35.85 2.66
3967 5781 2.037251 CCGACTTCTTCCAAACCTCTCA 59.963 50.000 0.00 0.00 0.00 3.27
3973 5787 5.300286 ACTTCTTCCAAACCTCTCACATTTG 59.700 40.000 0.00 0.00 33.90 2.32
4003 5817 4.445452 TGTATACACTTCGGAACTGGAC 57.555 45.455 0.08 0.00 0.00 4.02
4009 5823 1.000496 ACTTCGGAACTGGACGTCTTC 60.000 52.381 16.46 11.26 0.00 2.87
4015 5829 1.268899 GAACTGGACGTCTTCGGAAGA 59.731 52.381 16.19 16.19 41.85 2.87
4066 5880 3.471620 TGGTCAGCTCTCCACCAC 58.528 61.111 2.60 0.00 35.16 4.16
4132 5949 2.549754 CAAGACAGAAGCAACGATTGGT 59.450 45.455 0.00 0.00 44.43 3.67
4156 5973 3.056465 CGTTTCTAGAGGGAGATATGCCC 60.056 52.174 0.00 2.54 46.40 5.36
4186 6003 2.030562 CTCCAGTTCCGCGTGGTT 59.969 61.111 16.01 0.00 35.14 3.67
4204 6021 0.804364 TTGCGCAGTCCAATGATGAC 59.196 50.000 11.31 0.00 0.00 3.06
4230 6047 5.734220 GCATCAGCTTTGACTTTGACTTTGA 60.734 40.000 0.00 0.00 37.91 2.69
4260 6077 2.155279 GAACCTCCCTTTGCTTCAGTC 58.845 52.381 0.00 0.00 0.00 3.51
4261 6078 0.402121 ACCTCCCTTTGCTTCAGTCC 59.598 55.000 0.00 0.00 0.00 3.85
4289 6106 5.654209 AGAGTCTTTTTATTTGCCCATCCTC 59.346 40.000 0.00 0.00 0.00 3.71
4342 6161 2.223548 GCGTGCAATTGATATGCTTCCA 60.224 45.455 10.34 0.00 44.14 3.53
4356 6175 3.501040 TTCCAAACCGTCCCAGCCC 62.501 63.158 0.00 0.00 0.00 5.19
4437 6347 4.129380 CAATATTGCTGATCTCCACGGAA 58.871 43.478 1.74 0.00 0.00 4.30
4444 6356 1.757118 TGATCTCCACGGAAAGCTAGG 59.243 52.381 0.00 0.00 0.00 3.02
4503 6438 2.227388 CCAAACTGGTTGAGCTAAGCTG 59.773 50.000 7.08 0.00 39.87 4.24
4518 6453 2.742116 GCTGGCCGGGTATCTCCAA 61.742 63.158 15.02 0.00 38.11 3.53
4524 6459 1.396653 CCGGGTATCTCCAACTACGT 58.603 55.000 0.00 0.00 38.11 3.57
4535 6470 3.659786 TCCAACTACGTGAATCAAGGTG 58.340 45.455 0.00 0.00 0.00 4.00
4536 6471 3.070446 TCCAACTACGTGAATCAAGGTGT 59.930 43.478 0.00 0.00 0.00 4.16
4537 6472 3.813166 CCAACTACGTGAATCAAGGTGTT 59.187 43.478 0.00 2.77 0.00 3.32
4541 6476 4.989168 ACTACGTGAATCAAGGTGTTTCTC 59.011 41.667 0.00 0.00 29.82 2.87
4545 6480 5.357032 ACGTGAATCAAGGTGTTTCTCTTTT 59.643 36.000 0.75 0.00 29.82 2.27
4546 6481 6.127730 ACGTGAATCAAGGTGTTTCTCTTTTT 60.128 34.615 0.75 0.00 29.82 1.94
4548 6483 7.484140 GTGAATCAAGGTGTTTCTCTTTTTCT 58.516 34.615 0.00 0.00 29.82 2.52
4550 6485 7.557719 TGAATCAAGGTGTTTCTCTTTTTCTCT 59.442 33.333 1.90 0.00 29.82 3.10
4551 6486 6.683974 TCAAGGTGTTTCTCTTTTTCTCTG 57.316 37.500 0.00 0.00 0.00 3.35
4552 6487 6.180472 TCAAGGTGTTTCTCTTTTTCTCTGT 58.820 36.000 0.00 0.00 0.00 3.41
4553 6488 6.094048 TCAAGGTGTTTCTCTTTTTCTCTGTG 59.906 38.462 0.00 0.00 0.00 3.66
4555 6490 4.881850 GGTGTTTCTCTTTTTCTCTGTGGA 59.118 41.667 0.00 0.00 0.00 4.02
4558 6493 7.228706 GGTGTTTCTCTTTTTCTCTGTGGAATA 59.771 37.037 0.00 0.00 0.00 1.75
4560 6495 8.786898 TGTTTCTCTTTTTCTCTGTGGAATATG 58.213 33.333 0.00 0.00 0.00 1.78
4561 6496 8.787852 GTTTCTCTTTTTCTCTGTGGAATATGT 58.212 33.333 0.00 0.00 0.00 2.29
4580 6515 9.464714 GAATATGTATTCCTATATACGCTGTGG 57.535 37.037 2.06 0.00 36.85 4.17
4581 6516 5.068234 TGTATTCCTATATACGCTGTGGC 57.932 43.478 0.00 0.00 34.42 5.01
4583 6518 3.660501 TTCCTATATACGCTGTGGCAG 57.339 47.619 0.00 0.00 38.60 4.85
4584 6519 2.594131 TCCTATATACGCTGTGGCAGT 58.406 47.619 0.00 0.00 38.60 4.40
4586 6521 3.386726 TCCTATATACGCTGTGGCAGTTT 59.613 43.478 0.00 0.00 38.60 2.66
4588 6523 5.069383 TCCTATATACGCTGTGGCAGTTTAA 59.931 40.000 0.00 0.00 38.60 1.52
4592 6527 7.795482 ATATACGCTGTGGCAGTTTAATTTA 57.205 32.000 0.00 0.00 38.60 1.40
4593 6528 4.839668 ACGCTGTGGCAGTTTAATTTAA 57.160 36.364 0.00 0.00 38.60 1.52
4594 6529 5.189659 ACGCTGTGGCAGTTTAATTTAAA 57.810 34.783 0.00 0.00 38.60 1.52
4595 6530 4.979815 ACGCTGTGGCAGTTTAATTTAAAC 59.020 37.500 19.74 19.74 46.36 2.01
4639 6574 6.875972 AGGAACAGATGGAGTACTATTTGT 57.124 37.500 0.00 0.00 34.78 2.83
4642 6577 6.758886 GGAACAGATGGAGTACTATTTGTCAG 59.241 42.308 0.00 0.00 32.87 3.51
4643 6578 7.363880 GGAACAGATGGAGTACTATTTGTCAGA 60.364 40.741 0.00 0.00 32.87 3.27
4703 6642 7.542130 CAGCATTTCCCTATCAACTGTAAAAAC 59.458 37.037 0.00 0.00 0.00 2.43
4726 6667 5.477984 ACAACAGTTACCAATCTGAATGCAT 59.522 36.000 0.00 0.00 35.84 3.96
4833 6776 2.896044 TGGCAGCATTAACAAATCACCA 59.104 40.909 0.00 0.00 0.00 4.17
4834 6777 3.514706 TGGCAGCATTAACAAATCACCAT 59.485 39.130 0.00 0.00 0.00 3.55
4847 6793 6.752168 ACAAATCACCATGGAGAAAGAAAAG 58.248 36.000 21.47 6.21 0.00 2.27
4850 6796 7.454260 AATCACCATGGAGAAAGAAAAGTAC 57.546 36.000 21.47 0.00 0.00 2.73
4853 6799 5.182001 CACCATGGAGAAAGAAAAGTACTGG 59.818 44.000 21.47 0.00 0.00 4.00
4854 6800 5.073144 ACCATGGAGAAAGAAAAGTACTGGA 59.927 40.000 21.47 0.00 0.00 3.86
4857 6803 5.621193 TGGAGAAAGAAAAGTACTGGAAGG 58.379 41.667 0.00 0.00 39.30 3.46
4861 6807 6.838382 AGAAAGAAAAGTACTGGAAGGCTTA 58.162 36.000 0.00 0.00 39.30 3.09
4875 6821 1.539157 GGCTTACCTTTGCTTGCTCT 58.461 50.000 0.00 0.00 0.00 4.09
4876 6822 2.711542 GGCTTACCTTTGCTTGCTCTA 58.288 47.619 0.00 0.00 0.00 2.43
4879 6825 4.158579 GGCTTACCTTTGCTTGCTCTATTT 59.841 41.667 0.00 0.00 0.00 1.40
4880 6826 5.357032 GGCTTACCTTTGCTTGCTCTATTTA 59.643 40.000 0.00 0.00 0.00 1.40
4884 6830 9.937175 CTTACCTTTGCTTGCTCTATTTATTAC 57.063 33.333 0.00 0.00 0.00 1.89
4903 6849 2.919228 ACTGTCTTTCGAAGCAAAGGT 58.081 42.857 0.00 0.00 34.58 3.50
4904 6850 3.279434 ACTGTCTTTCGAAGCAAAGGTT 58.721 40.909 0.00 0.00 34.58 3.50
4910 6856 6.528774 TGTCTTTCGAAGCAAAGGTTAAAAAC 59.471 34.615 0.00 0.00 34.58 2.43
4912 6858 7.274904 GTCTTTCGAAGCAAAGGTTAAAAACTT 59.725 33.333 0.00 0.00 34.58 2.66
4913 6859 8.460428 TCTTTCGAAGCAAAGGTTAAAAACTTA 58.540 29.630 0.00 0.00 34.58 2.24
4914 6860 9.244799 CTTTCGAAGCAAAGGTTAAAAACTTAT 57.755 29.630 0.00 0.00 30.77 1.73
4943 6898 7.462731 TGCTTTGTTTTCTTTTGTAGCAAATG 58.537 30.769 0.00 0.00 34.76 2.32
4944 6899 6.411782 GCTTTGTTTTCTTTTGTAGCAAATGC 59.588 34.615 0.00 0.00 42.49 3.56
5096 7060 9.676861 AAGTTTACTTTGTGGAGTTTAGTAGTT 57.323 29.630 0.00 0.00 30.82 2.24
5105 7069 9.452287 TTGTGGAGTTTAGTAGTTTGTTACTTT 57.548 29.630 0.00 0.00 38.33 2.66
5112 7076 9.494479 GTTTAGTAGTTTGTTACTTTGTTGTCC 57.506 33.333 0.00 0.00 38.33 4.02
5157 7121 4.961438 AAAATTGTTGGGTTCTCATGCT 57.039 36.364 0.00 0.00 0.00 3.79
5158 7122 3.947910 AATTGTTGGGTTCTCATGCTG 57.052 42.857 0.00 0.00 0.00 4.41
5162 7126 3.826524 TGTTGGGTTCTCATGCTGTTTA 58.173 40.909 0.00 0.00 0.00 2.01
5173 7143 3.312146 TCATGCTGTTTAGTGTGTGTGTG 59.688 43.478 0.00 0.00 0.00 3.82
5176 7146 2.418628 GCTGTTTAGTGTGTGTGTGTGT 59.581 45.455 0.00 0.00 0.00 3.72
5178 7148 3.403968 TGTTTAGTGTGTGTGTGTGTGT 58.596 40.909 0.00 0.00 0.00 3.72
5179 7149 3.433957 TGTTTAGTGTGTGTGTGTGTGTC 59.566 43.478 0.00 0.00 0.00 3.67
5180 7150 3.320673 TTAGTGTGTGTGTGTGTGTCA 57.679 42.857 0.00 0.00 0.00 3.58
5181 7151 2.177394 AGTGTGTGTGTGTGTGTCAA 57.823 45.000 0.00 0.00 0.00 3.18
5186 7156 3.058570 TGTGTGTGTGTGTGTCAAGTTTC 60.059 43.478 0.00 0.00 0.00 2.78
5188 7158 3.188254 TGTGTGTGTGTGTCAAGTTTCTG 59.812 43.478 0.00 0.00 0.00 3.02
5211 7181 5.047188 GTGTCCTTTTTGGTGTATTGGTTG 58.953 41.667 0.00 0.00 37.07 3.77
5212 7182 4.100189 TGTCCTTTTTGGTGTATTGGTTGG 59.900 41.667 0.00 0.00 37.07 3.77
5213 7183 3.070302 TCCTTTTTGGTGTATTGGTTGGC 59.930 43.478 0.00 0.00 37.07 4.52
5215 7185 3.742433 TTTTGGTGTATTGGTTGGCAG 57.258 42.857 0.00 0.00 0.00 4.85
5235 7218 5.278758 GGCAGGTGTGTGTTTATATGTGTTT 60.279 40.000 0.00 0.00 0.00 2.83
5238 7221 7.298122 CAGGTGTGTGTTTATATGTGTTTCTC 58.702 38.462 0.00 0.00 0.00 2.87
5334 7577 0.553612 AAGAAGGAGGAGGGGCCAAT 60.554 55.000 4.39 0.00 40.02 3.16
5346 7589 2.025321 AGGGGCCAATCATAAACTCGTT 60.025 45.455 4.39 0.00 0.00 3.85
5386 7629 9.715121 TTAATGTTCTTACAATTTACCGTCTCT 57.285 29.630 0.00 0.00 37.91 3.10
5398 7641 9.274065 CAATTTACCGTCTCTTTTATTTGTAGC 57.726 33.333 0.00 0.00 0.00 3.58
5400 7643 7.591006 TTACCGTCTCTTTTATTTGTAGCTG 57.409 36.000 0.00 0.00 0.00 4.24
5401 7644 5.790593 ACCGTCTCTTTTATTTGTAGCTGA 58.209 37.500 0.00 0.00 0.00 4.26
5402 7645 6.228258 ACCGTCTCTTTTATTTGTAGCTGAA 58.772 36.000 0.00 0.00 0.00 3.02
5403 7646 6.879458 ACCGTCTCTTTTATTTGTAGCTGAAT 59.121 34.615 0.00 0.00 0.00 2.57
5404 7647 7.390718 ACCGTCTCTTTTATTTGTAGCTGAATT 59.609 33.333 0.00 0.00 0.00 2.17
5433 7676 8.819974 TCTCATTGTTTTCTTCATTTTTCTTGC 58.180 29.630 0.00 0.00 0.00 4.01
5434 7677 8.721019 TCATTGTTTTCTTCATTTTTCTTGCT 57.279 26.923 0.00 0.00 0.00 3.91
5435 7678 8.819974 TCATTGTTTTCTTCATTTTTCTTGCTC 58.180 29.630 0.00 0.00 0.00 4.26
5436 7679 8.605746 CATTGTTTTCTTCATTTTTCTTGCTCA 58.394 29.630 0.00 0.00 0.00 4.26
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
10 11 2.719046 CGTGAAACAAAACGAGGAATGC 59.281 45.455 0.00 0.00 42.32 3.56
22 23 1.010580 ACGCATGTGTCGTGAAACAA 58.989 45.000 5.96 0.00 38.88 2.83
86 87 3.581024 ACATCGACGCAAGGTTAACTA 57.419 42.857 5.42 0.00 46.39 2.24
88 89 2.834689 CAACATCGACGCAAGGTTAAC 58.165 47.619 0.00 0.00 46.39 2.01
89 90 1.195900 GCAACATCGACGCAAGGTTAA 59.804 47.619 0.00 0.00 46.39 2.01
90 91 0.793861 GCAACATCGACGCAAGGTTA 59.206 50.000 0.00 0.00 46.39 2.85
93 94 1.061131 CTTAGCAACATCGACGCAAGG 59.939 52.381 0.00 0.00 46.39 3.61
96 97 1.629013 CTCTTAGCAACATCGACGCA 58.371 50.000 0.00 0.00 0.00 5.24
97 98 0.924090 CCTCTTAGCAACATCGACGC 59.076 55.000 0.00 0.00 0.00 5.19
102 103 1.336125 GCATGCCCTCTTAGCAACATC 59.664 52.381 6.36 0.00 44.83 3.06
106 107 3.137176 AGATAAGCATGCCCTCTTAGCAA 59.863 43.478 15.66 0.00 44.83 3.91
113 114 1.696336 TGGAGAGATAAGCATGCCCTC 59.304 52.381 15.66 15.31 0.00 4.30
126 127 6.183361 GCCTCCTATTAAACAATCTGGAGAGA 60.183 42.308 15.24 0.00 41.31 3.10
162 1294 1.174712 CCTTGTGGTCAACCTGGCAG 61.175 60.000 7.75 7.75 36.82 4.85
194 1326 6.261158 TGAGTTTATGTCACCATTTTGAACGA 59.739 34.615 0.00 0.00 32.29 3.85
203 1341 8.049117 ACACTATCAATGAGTTTATGTCACCAT 58.951 33.333 0.00 0.00 34.97 3.55
209 1347 9.155975 GTTGAGACACTATCAATGAGTTTATGT 57.844 33.333 0.00 0.00 38.81 2.29
211 1349 9.950496 AAGTTGAGACACTATCAATGAGTTTAT 57.050 29.630 0.00 0.00 38.81 1.40
213 1351 7.308229 GCAAGTTGAGACACTATCAATGAGTTT 60.308 37.037 7.16 0.00 38.81 2.66
217 1355 5.409520 GTGCAAGTTGAGACACTATCAATGA 59.590 40.000 7.16 0.00 38.81 2.57
225 1363 2.991250 AGTTGTGCAAGTTGAGACACT 58.009 42.857 7.16 6.04 34.14 3.55
226 1364 3.764885 AAGTTGTGCAAGTTGAGACAC 57.235 42.857 7.16 6.12 33.07 3.67
289 1470 5.350504 TTCTCCCTATTGAAGAAGCTGAG 57.649 43.478 0.00 0.00 0.00 3.35
291 1472 4.637977 GGTTTCTCCCTATTGAAGAAGCTG 59.362 45.833 0.00 0.00 0.00 4.24
292 1473 4.289672 TGGTTTCTCCCTATTGAAGAAGCT 59.710 41.667 0.00 0.00 34.77 3.74
295 1476 5.947663 TGTTGGTTTCTCCCTATTGAAGAA 58.052 37.500 0.00 0.00 34.77 2.52
303 1484 4.513406 ACAAGTTGTTGGTTTCTCCCTA 57.487 40.909 1.64 0.00 38.07 3.53
339 1522 8.986847 CAAAACAAATGAACCATTATTGCACTA 58.013 29.630 0.00 0.00 32.43 2.74
355 1538 4.685628 CCCCGTTGATCTTCAAAACAAATG 59.314 41.667 0.00 0.00 38.22 2.32
376 1559 1.078637 GTAAGCGACCAAGACCCCC 60.079 63.158 0.00 0.00 0.00 5.40
377 1560 0.108281 GAGTAAGCGACCAAGACCCC 60.108 60.000 0.00 0.00 0.00 4.95
378 1561 0.458025 CGAGTAAGCGACCAAGACCC 60.458 60.000 0.00 0.00 0.00 4.46
379 1562 0.243095 ACGAGTAAGCGACCAAGACC 59.757 55.000 0.00 0.00 34.83 3.85
380 1563 2.095567 TGTACGAGTAAGCGACCAAGAC 60.096 50.000 0.00 0.00 34.83 3.01
381 1564 2.153645 TGTACGAGTAAGCGACCAAGA 58.846 47.619 0.00 0.00 34.83 3.02
382 1565 2.624316 TGTACGAGTAAGCGACCAAG 57.376 50.000 0.00 0.00 34.83 3.61
383 1566 2.229543 ACATGTACGAGTAAGCGACCAA 59.770 45.455 0.00 0.00 34.83 3.67
384 1567 1.814394 ACATGTACGAGTAAGCGACCA 59.186 47.619 0.00 0.00 34.83 4.02
385 1568 2.556534 ACATGTACGAGTAAGCGACC 57.443 50.000 0.00 0.00 34.83 4.79
386 1569 5.283247 GCATATACATGTACGAGTAAGCGAC 59.717 44.000 7.96 0.00 34.40 5.19
387 1570 5.049267 TGCATATACATGTACGAGTAAGCGA 60.049 40.000 7.96 0.00 34.40 4.93
388 1571 5.151389 TGCATATACATGTACGAGTAAGCG 58.849 41.667 7.96 0.00 34.40 4.68
389 1572 8.858003 ATATGCATATACATGTACGAGTAAGC 57.142 34.615 17.72 6.14 34.40 3.09
392 1575 9.398538 TGGTATATGCATATACATGTACGAGTA 57.601 33.333 38.71 19.20 44.29 2.59
393 1576 8.288689 TGGTATATGCATATACATGTACGAGT 57.711 34.615 38.71 13.83 44.29 4.18
394 1577 9.185192 CATGGTATATGCATATACATGTACGAG 57.815 37.037 38.71 23.33 44.29 4.18
395 1578 8.691797 ACATGGTATATGCATATACATGTACGA 58.308 33.333 36.40 24.12 44.29 3.43
396 1579 8.871686 ACATGGTATATGCATATACATGTACG 57.128 34.615 36.40 27.77 44.29 3.67
397 1580 9.816354 TGACATGGTATATGCATATACATGTAC 57.184 33.333 36.74 32.08 44.29 2.90
399 1582 9.551734 GATGACATGGTATATGCATATACATGT 57.448 33.333 36.97 36.97 44.29 3.21
400 1583 9.774413 AGATGACATGGTATATGCATATACATG 57.226 33.333 38.71 35.97 44.29 3.21
405 1588 8.996655 AGGTTAGATGACATGGTATATGCATAT 58.003 33.333 22.31 22.31 0.00 1.78
406 1589 8.260114 CAGGTTAGATGACATGGTATATGCATA 58.740 37.037 9.27 9.27 0.00 3.14
407 1590 7.108194 CAGGTTAGATGACATGGTATATGCAT 58.892 38.462 3.79 3.79 0.00 3.96
408 1591 6.466812 CAGGTTAGATGACATGGTATATGCA 58.533 40.000 0.00 0.00 0.00 3.96
409 1592 5.352569 GCAGGTTAGATGACATGGTATATGC 59.647 44.000 0.00 0.00 32.32 3.14
410 1593 6.705302 AGCAGGTTAGATGACATGGTATATG 58.295 40.000 0.00 0.00 39.84 1.78
411 1594 6.942163 AGCAGGTTAGATGACATGGTATAT 57.058 37.500 0.00 0.00 39.84 0.86
412 1595 6.326323 TGAAGCAGGTTAGATGACATGGTATA 59.674 38.462 0.00 0.00 40.61 1.47
413 1596 5.130975 TGAAGCAGGTTAGATGACATGGTAT 59.869 40.000 0.00 0.00 40.61 2.73
414 1597 4.469586 TGAAGCAGGTTAGATGACATGGTA 59.530 41.667 0.00 0.00 40.61 3.25
415 1598 3.264193 TGAAGCAGGTTAGATGACATGGT 59.736 43.478 0.00 0.00 42.92 3.55
416 1599 3.877559 TGAAGCAGGTTAGATGACATGG 58.122 45.455 0.00 0.00 32.32 3.66
417 1600 4.334759 CCTTGAAGCAGGTTAGATGACATG 59.665 45.833 0.00 0.00 34.64 3.21
418 1601 4.225942 TCCTTGAAGCAGGTTAGATGACAT 59.774 41.667 0.00 0.00 35.15 3.06
419 1602 3.582647 TCCTTGAAGCAGGTTAGATGACA 59.417 43.478 0.00 0.00 35.15 3.58
420 1603 4.207891 TCCTTGAAGCAGGTTAGATGAC 57.792 45.455 0.00 0.00 35.15 3.06
421 1604 5.188434 CAATCCTTGAAGCAGGTTAGATGA 58.812 41.667 0.00 0.00 35.15 2.92
422 1605 4.337555 CCAATCCTTGAAGCAGGTTAGATG 59.662 45.833 0.00 0.00 35.15 2.90
423 1606 4.530875 CCAATCCTTGAAGCAGGTTAGAT 58.469 43.478 0.00 0.00 35.15 1.98
424 1607 3.308402 CCCAATCCTTGAAGCAGGTTAGA 60.308 47.826 0.00 0.00 35.15 2.10
425 1608 3.019564 CCCAATCCTTGAAGCAGGTTAG 58.980 50.000 0.00 0.00 35.15 2.34
426 1609 2.378547 ACCCAATCCTTGAAGCAGGTTA 59.621 45.455 0.00 0.00 35.15 2.85
427 1610 1.147817 ACCCAATCCTTGAAGCAGGTT 59.852 47.619 0.00 0.00 35.15 3.50
428 1611 0.779997 ACCCAATCCTTGAAGCAGGT 59.220 50.000 0.00 0.00 35.15 4.00
429 1612 2.239654 TCTACCCAATCCTTGAAGCAGG 59.760 50.000 0.00 0.00 34.86 4.85
430 1613 3.198635 TCTCTACCCAATCCTTGAAGCAG 59.801 47.826 0.00 0.00 0.00 4.24
431 1614 3.181329 TCTCTACCCAATCCTTGAAGCA 58.819 45.455 0.00 0.00 0.00 3.91
432 1615 3.914426 TCTCTACCCAATCCTTGAAGC 57.086 47.619 0.00 0.00 0.00 3.86
433 1616 4.518249 GGTTCTCTACCCAATCCTTGAAG 58.482 47.826 0.00 0.00 41.43 3.02
434 1617 4.569719 GGTTCTCTACCCAATCCTTGAA 57.430 45.455 0.00 0.00 41.43 2.69
445 1628 8.062228 GGTTTCATCAAGCATGGTTCTCTACC 62.062 46.154 7.29 7.20 38.90 3.18
446 1629 5.163713 GGTTTCATCAAGCATGGTTCTCTAC 60.164 44.000 7.29 1.94 32.64 2.59
447 1630 4.943705 GGTTTCATCAAGCATGGTTCTCTA 59.056 41.667 7.29 0.00 32.64 2.43
448 1631 3.760684 GGTTTCATCAAGCATGGTTCTCT 59.239 43.478 7.29 0.00 32.64 3.10
449 1632 3.507233 TGGTTTCATCAAGCATGGTTCTC 59.493 43.478 7.29 0.00 37.98 2.87
450 1633 3.256631 GTGGTTTCATCAAGCATGGTTCT 59.743 43.478 7.29 0.00 44.63 3.01
451 1634 3.005684 TGTGGTTTCATCAAGCATGGTTC 59.994 43.478 7.29 0.00 44.63 3.62
452 1635 2.964464 TGTGGTTTCATCAAGCATGGTT 59.036 40.909 3.82 3.82 44.63 3.67
453 1636 2.596346 TGTGGTTTCATCAAGCATGGT 58.404 42.857 0.00 0.00 44.63 3.55
454 1637 3.880047 ATGTGGTTTCATCAAGCATGG 57.120 42.857 0.00 0.00 44.63 3.66
455 1638 5.898174 ACATATGTGGTTTCATCAAGCATG 58.102 37.500 7.78 0.00 44.63 4.06
456 1639 7.255695 CCATACATATGTGGTTTCATCAAGCAT 60.256 37.037 18.81 0.00 44.63 3.79
457 1640 6.039605 CCATACATATGTGGTTTCATCAAGCA 59.960 38.462 18.81 0.00 40.69 3.91
458 1641 6.441274 CCATACATATGTGGTTTCATCAAGC 58.559 40.000 18.81 0.00 32.49 4.01
469 1652 8.585018 TCATACTAACTCACCATACATATGTGG 58.415 37.037 18.81 14.06 42.72 4.17
470 1653 9.631452 CTCATACTAACTCACCATACATATGTG 57.369 37.037 18.81 4.37 31.82 3.21
471 1654 9.588096 TCTCATACTAACTCACCATACATATGT 57.412 33.333 13.93 13.93 31.82 2.29
474 1657 9.508642 CTCTCTCATACTAACTCACCATACATA 57.491 37.037 0.00 0.00 0.00 2.29
475 1658 8.221251 TCTCTCTCATACTAACTCACCATACAT 58.779 37.037 0.00 0.00 0.00 2.29
476 1659 7.574607 TCTCTCTCATACTAACTCACCATACA 58.425 38.462 0.00 0.00 0.00 2.29
477 1660 8.453238 TTCTCTCTCATACTAACTCACCATAC 57.547 38.462 0.00 0.00 0.00 2.39
478 1661 9.647918 ATTTCTCTCTCATACTAACTCACCATA 57.352 33.333 0.00 0.00 0.00 2.74
482 1665 9.405587 GCATATTTCTCTCTCATACTAACTCAC 57.594 37.037 0.00 0.00 0.00 3.51
488 1671 9.588096 TTGTAGGCATATTTCTCTCTCATACTA 57.412 33.333 0.00 0.00 0.00 1.82
562 1749 8.942338 TGCGAAGTTCTCTTGTGTTATATATT 57.058 30.769 0.56 0.00 33.64 1.28
565 1752 6.649141 TGTTGCGAAGTTCTCTTGTGTTATAT 59.351 34.615 0.56 0.00 33.64 0.86
567 1754 4.814234 TGTTGCGAAGTTCTCTTGTGTTAT 59.186 37.500 0.56 0.00 33.64 1.89
568 1755 4.033587 GTGTTGCGAAGTTCTCTTGTGTTA 59.966 41.667 0.56 0.00 33.64 2.41
569 1756 3.006940 TGTTGCGAAGTTCTCTTGTGTT 58.993 40.909 0.56 0.00 33.64 3.32
581 1768 4.382457 CACCATTACATTTGTGTTGCGAAG 59.618 41.667 0.00 0.00 0.00 3.79
584 1771 2.408032 GCACCATTACATTTGTGTTGCG 59.592 45.455 0.00 0.00 0.00 4.85
589 1776 5.163513 GGAAGAAGCACCATTACATTTGTG 58.836 41.667 0.00 0.00 0.00 3.33
590 1777 4.832266 TGGAAGAAGCACCATTACATTTGT 59.168 37.500 0.00 0.00 0.00 2.83
591 1778 5.389859 TGGAAGAAGCACCATTACATTTG 57.610 39.130 0.00 0.00 0.00 2.32
604 1791 8.498358 CCTAAAAATTTTGACAATGGAAGAAGC 58.502 33.333 3.73 0.00 0.00 3.86
605 1792 8.992073 CCCTAAAAATTTTGACAATGGAAGAAG 58.008 33.333 3.73 0.00 0.00 2.85
615 1802 8.646900 AGTAAATCTGCCCTAAAAATTTTGACA 58.353 29.630 3.73 0.00 0.00 3.58
616 1803 8.925700 CAGTAAATCTGCCCTAAAAATTTTGAC 58.074 33.333 3.73 0.00 37.36 3.18
624 1811 9.693739 TCATAATTCAGTAAATCTGCCCTAAAA 57.306 29.630 0.00 0.00 43.32 1.52
629 1816 8.515414 GGTTATCATAATTCAGTAAATCTGCCC 58.485 37.037 0.00 0.00 43.32 5.36
630 1817 9.066892 TGGTTATCATAATTCAGTAAATCTGCC 57.933 33.333 0.00 0.00 43.32 4.85
640 1862 9.903682 CAAGGCTTAATGGTTATCATAATTCAG 57.096 33.333 0.00 0.00 34.44 3.02
648 1870 7.801104 TGTCTATCAAGGCTTAATGGTTATCA 58.199 34.615 0.00 0.00 0.00 2.15
651 1873 7.715249 GTGATGTCTATCAAGGCTTAATGGTTA 59.285 37.037 0.00 0.00 44.49 2.85
670 1892 6.417044 GGTACTACGTTCATACATGTGATGTC 59.583 42.308 9.11 6.08 43.67 3.06
674 1896 5.900865 TGGTACTACGTTCATACATGTGA 57.099 39.130 9.11 0.00 0.00 3.58
701 1923 8.516234 TGTACGCTTTGACCATGTTATTAAATT 58.484 29.630 0.00 0.00 0.00 1.82
703 1925 7.436430 TGTACGCTTTGACCATGTTATTAAA 57.564 32.000 0.00 0.00 0.00 1.52
710 1993 2.290008 TGGATGTACGCTTTGACCATGT 60.290 45.455 0.00 0.00 0.00 3.21
713 1996 2.550606 GTTTGGATGTACGCTTTGACCA 59.449 45.455 0.00 0.00 0.00 4.02
723 2006 6.148150 TGGTTCAACTAATCGTTTGGATGTAC 59.852 38.462 0.00 0.00 34.93 2.90
726 2009 5.621197 TGGTTCAACTAATCGTTTGGATG 57.379 39.130 0.00 0.00 34.93 3.51
732 2015 5.401550 CATGCATTGGTTCAACTAATCGTT 58.598 37.500 0.00 0.00 35.88 3.85
770 2053 2.170607 GAGGCCTAAAGCATGTACCAGA 59.829 50.000 4.42 0.00 46.50 3.86
771 2054 2.565841 GAGGCCTAAAGCATGTACCAG 58.434 52.381 4.42 0.00 46.50 4.00
774 2057 4.625607 ATAGGAGGCCTAAAGCATGTAC 57.374 45.455 4.42 0.00 46.50 2.90
797 2083 9.374711 TCATATAGTTTTTCCACTTCCCTTTTT 57.625 29.630 0.00 0.00 0.00 1.94
798 2084 8.950007 TCATATAGTTTTTCCACTTCCCTTTT 57.050 30.769 0.00 0.00 0.00 2.27
800 2086 7.928873 TCTCATATAGTTTTTCCACTTCCCTT 58.071 34.615 0.00 0.00 0.00 3.95
801 2087 7.510675 TCTCATATAGTTTTTCCACTTCCCT 57.489 36.000 0.00 0.00 0.00 4.20
826 2113 8.907885 GCTCCTTTCTTGAAATCAAATAGGTAT 58.092 33.333 13.27 0.00 35.15 2.73
827 2114 7.888021 TGCTCCTTTCTTGAAATCAAATAGGTA 59.112 33.333 13.27 5.00 35.15 3.08
828 2115 6.721208 TGCTCCTTTCTTGAAATCAAATAGGT 59.279 34.615 13.27 0.00 35.15 3.08
829 2116 7.161773 TGCTCCTTTCTTGAAATCAAATAGG 57.838 36.000 9.75 9.75 35.15 2.57
830 2117 9.136952 CTTTGCTCCTTTCTTGAAATCAAATAG 57.863 33.333 0.00 0.00 35.15 1.73
831 2118 8.641541 ACTTTGCTCCTTTCTTGAAATCAAATA 58.358 29.630 0.00 0.00 35.15 1.40
832 2119 7.503549 ACTTTGCTCCTTTCTTGAAATCAAAT 58.496 30.769 0.00 0.00 35.15 2.32
833 2120 6.877236 ACTTTGCTCCTTTCTTGAAATCAAA 58.123 32.000 0.00 5.14 35.15 2.69
834 2121 6.469782 ACTTTGCTCCTTTCTTGAAATCAA 57.530 33.333 0.00 0.00 0.00 2.57
835 2122 6.469782 AACTTTGCTCCTTTCTTGAAATCA 57.530 33.333 0.00 0.00 0.00 2.57
836 2123 7.425606 TGTAACTTTGCTCCTTTCTTGAAATC 58.574 34.615 0.00 0.00 0.00 2.17
837 2124 7.346751 TGTAACTTTGCTCCTTTCTTGAAAT 57.653 32.000 0.00 0.00 0.00 2.17
838 2125 6.767524 TGTAACTTTGCTCCTTTCTTGAAA 57.232 33.333 0.00 0.00 0.00 2.69
839 2126 6.767524 TTGTAACTTTGCTCCTTTCTTGAA 57.232 33.333 0.00 0.00 0.00 2.69
840 2127 6.959639 ATTGTAACTTTGCTCCTTTCTTGA 57.040 33.333 0.00 0.00 0.00 3.02
841 2128 7.648142 TGTATTGTAACTTTGCTCCTTTCTTG 58.352 34.615 0.00 0.00 0.00 3.02
842 2129 7.817418 TGTATTGTAACTTTGCTCCTTTCTT 57.183 32.000 0.00 0.00 0.00 2.52
843 2130 7.719633 TCTTGTATTGTAACTTTGCTCCTTTCT 59.280 33.333 0.00 0.00 0.00 2.52
844 2131 7.871853 TCTTGTATTGTAACTTTGCTCCTTTC 58.128 34.615 0.00 0.00 0.00 2.62
845 2132 7.719633 TCTCTTGTATTGTAACTTTGCTCCTTT 59.280 33.333 0.00 0.00 0.00 3.11
846 2133 7.224297 TCTCTTGTATTGTAACTTTGCTCCTT 58.776 34.615 0.00 0.00 0.00 3.36
847 2134 6.769512 TCTCTTGTATTGTAACTTTGCTCCT 58.230 36.000 0.00 0.00 0.00 3.69
848 2135 7.173390 ACTTCTCTTGTATTGTAACTTTGCTCC 59.827 37.037 0.00 0.00 0.00 4.70
849 2136 8.089115 ACTTCTCTTGTATTGTAACTTTGCTC 57.911 34.615 0.00 0.00 0.00 4.26
850 2137 8.451908 AACTTCTCTTGTATTGTAACTTTGCT 57.548 30.769 0.00 0.00 0.00 3.91
851 2138 8.958043 CAAACTTCTCTTGTATTGTAACTTTGC 58.042 33.333 0.00 0.00 0.00 3.68
856 2143 9.997482 TCAAACAAACTTCTCTTGTATTGTAAC 57.003 29.630 0.00 0.00 35.98 2.50
859 2146 9.125026 AGATCAAACAAACTTCTCTTGTATTGT 57.875 29.630 0.00 0.00 35.98 2.71
860 2147 9.604626 GAGATCAAACAAACTTCTCTTGTATTG 57.395 33.333 0.00 0.00 35.98 1.90
865 2152 7.256756 ACTGAGATCAAACAAACTTCTCTTG 57.743 36.000 0.00 0.00 35.09 3.02
870 2157 8.862550 AATGAAACTGAGATCAAACAAACTTC 57.137 30.769 0.00 0.00 0.00 3.01
894 2181 7.658575 ACGCTGGTCTTTATAGTTGTTTCTAAA 59.341 33.333 0.00 0.00 0.00 1.85
898 2185 5.178809 ACACGCTGGTCTTTATAGTTGTTTC 59.821 40.000 0.00 0.00 0.00 2.78
899 2186 5.049680 CACACGCTGGTCTTTATAGTTGTTT 60.050 40.000 0.00 0.00 0.00 2.83
901 2188 3.994392 CACACGCTGGTCTTTATAGTTGT 59.006 43.478 0.00 0.00 0.00 3.32
902 2189 4.242475 TCACACGCTGGTCTTTATAGTTG 58.758 43.478 0.00 0.00 0.00 3.16
903 2190 4.530710 TCACACGCTGGTCTTTATAGTT 57.469 40.909 0.00 0.00 0.00 2.24
912 2207 2.363788 TATGTCTTCACACGCTGGTC 57.636 50.000 0.00 0.00 34.48 4.02
915 2210 2.668457 GGAGTTATGTCTTCACACGCTG 59.332 50.000 0.00 0.00 34.48 5.18
936 2231 1.120795 ATGCTTTTGTGTGGTGGGGG 61.121 55.000 0.00 0.00 0.00 5.40
940 2235 4.043750 CACAGTAATGCTTTTGTGTGGTG 58.956 43.478 14.30 0.00 36.92 4.17
941 2236 3.490761 GCACAGTAATGCTTTTGTGTGGT 60.491 43.478 19.63 0.21 42.13 4.16
944 2239 3.130164 TGTGCACAGTAATGCTTTTGTGT 59.870 39.130 17.42 6.33 46.28 3.72
946 2241 4.383850 TTGTGCACAGTAATGCTTTTGT 57.616 36.364 20.59 0.00 46.28 2.83
947 2242 4.565962 TGTTTGTGCACAGTAATGCTTTTG 59.434 37.500 20.59 0.00 46.28 2.44
948 2243 4.753233 TGTTTGTGCACAGTAATGCTTTT 58.247 34.783 20.59 0.00 46.28 2.27
958 2530 4.550577 TGTCTTGTATGTTTGTGCACAG 57.449 40.909 20.59 5.09 0.00 3.66
971 2543 4.814234 CACTTAACAGCTGGTTGTCTTGTA 59.186 41.667 19.93 0.00 40.73 2.41
974 2546 2.618709 GCACTTAACAGCTGGTTGTCTT 59.381 45.455 19.93 4.36 40.73 3.01
975 2547 2.222027 GCACTTAACAGCTGGTTGTCT 58.778 47.619 19.93 0.00 40.73 3.41
976 2548 1.946768 TGCACTTAACAGCTGGTTGTC 59.053 47.619 19.93 8.82 40.73 3.18
977 2549 2.051334 TGCACTTAACAGCTGGTTGT 57.949 45.000 19.93 11.41 40.73 3.32
993 2566 2.359850 GCGAGGTCCATGGTTGCA 60.360 61.111 12.58 0.00 0.00 4.08
1082 2656 6.644347 AGATATTCAACATCTTCCTTGACGT 58.356 36.000 0.00 0.00 28.01 4.34
1156 2730 2.046892 GAGCTGGTCACGTGGCAT 60.047 61.111 23.45 4.15 0.00 4.40
1164 2738 2.596338 TGGTCGTCGAGCTGGTCA 60.596 61.111 23.53 1.71 0.00 4.02
1183 2757 2.037136 CGTTGGCCCAGAGCTTGAG 61.037 63.158 0.00 0.00 43.05 3.02
1332 2996 4.887748 TCTCATGGTGAGTCTTGTTCTTC 58.112 43.478 6.83 0.00 44.58 2.87
1337 3001 3.450457 GGAGATCTCATGGTGAGTCTTGT 59.550 47.826 23.85 0.00 44.58 3.16
1346 3010 3.235750 TCTCATCGGAGATCTCATGGT 57.764 47.619 23.85 9.47 45.12 3.55
1398 3062 1.174783 ACCTATCACGTCGTTCAGCT 58.825 50.000 0.00 0.00 0.00 4.24
1404 3068 1.340405 ACCCAGTACCTATCACGTCGT 60.340 52.381 0.00 0.00 0.00 4.34
1420 3084 0.181587 ACAACCACATCGTTGACCCA 59.818 50.000 8.36 0.00 44.88 4.51
1453 3117 2.083774 GCGAGGGTCAACATTGATTGA 58.916 47.619 0.00 0.00 39.73 2.57
1460 3124 1.134098 CCAATAGGCGAGGGTCAACAT 60.134 52.381 0.00 0.00 0.00 2.71
1539 3203 5.367644 ACCATCTCCATCACACATCATCTTA 59.632 40.000 0.00 0.00 0.00 2.10
1549 3213 1.473788 CGCATCACCATCTCCATCACA 60.474 52.381 0.00 0.00 0.00 3.58
1557 3221 1.651240 GCTTGCACGCATCACCATCT 61.651 55.000 10.77 0.00 0.00 2.90
1602 3266 0.827507 TCTTGCCAAGGCCTCCAAAC 60.828 55.000 5.23 0.00 41.09 2.93
1667 3331 1.199624 CGGAACAAAAGCACAGCAAC 58.800 50.000 0.00 0.00 0.00 4.17
1710 3374 8.139989 CCAAAGAGAATGTCATTGAGAAGTTTT 58.860 33.333 1.88 0.00 36.18 2.43
1741 3406 5.263185 CAACTCCGTGTACTTTTTCTTGTG 58.737 41.667 0.00 0.00 0.00 3.33
1756 3436 1.279271 CTCCCTTTCATCCAACTCCGT 59.721 52.381 0.00 0.00 0.00 4.69
1774 3454 1.135373 TCGGAGTTTGTCGATCAGCTC 60.135 52.381 0.00 0.00 32.89 4.09
1796 3476 8.177119 TGCATACCTTTTGTTCTCAAGTAATT 57.823 30.769 0.00 0.00 34.88 1.40
1862 3543 1.152376 TGCCTTTCATGCAACCCCA 60.152 52.632 0.00 0.00 35.40 4.96
1898 3588 3.197766 CAGGGTGCATACCTCTTGTTCTA 59.802 47.826 9.73 0.00 46.66 2.10
1958 3663 2.020720 TCTCAGGATTGACGCTCTCTC 58.979 52.381 0.00 0.00 0.00 3.20
1960 3665 2.425312 TCTTCTCAGGATTGACGCTCTC 59.575 50.000 0.00 0.00 0.00 3.20
1962 3669 2.949451 TCTTCTCAGGATTGACGCTC 57.051 50.000 0.00 0.00 0.00 5.03
1987 3704 8.477419 AACCAAAATTTCCACTCATCTCTAAA 57.523 30.769 0.00 0.00 0.00 1.85
1990 3707 6.550854 TCAAACCAAAATTTCCACTCATCTCT 59.449 34.615 0.00 0.00 0.00 3.10
2023 3743 6.974795 AGAGGGCATCTAAAACCTTATCTTT 58.025 36.000 0.00 0.00 36.10 2.52
2033 3756 2.435805 AGCGATGAGAGGGCATCTAAAA 59.564 45.455 0.00 0.00 41.90 1.52
2037 3760 1.047596 ACAGCGATGAGAGGGCATCT 61.048 55.000 8.12 0.00 41.90 2.90
2042 3765 0.036952 ACACAACAGCGATGAGAGGG 60.037 55.000 8.12 0.00 0.00 4.30
2046 3769 3.848019 GCAAAATACACAACAGCGATGAG 59.152 43.478 8.12 1.37 0.00 2.90
2121 3848 7.522236 GCCATCCAATTATAGCAAAGAAGGTAC 60.522 40.741 0.00 0.00 0.00 3.34
2147 3880 4.988540 TCAGTGAAGATTCAACGGTAAGTG 59.011 41.667 0.00 0.00 39.21 3.16
2162 3895 6.820152 TCCAGAATATGTGAACATCAGTGAAG 59.180 38.462 0.00 0.00 37.76 3.02
2166 3904 5.104610 AGCTCCAGAATATGTGAACATCAGT 60.105 40.000 0.00 0.00 37.76 3.41
2169 3907 6.054295 AGAAGCTCCAGAATATGTGAACATC 58.946 40.000 0.00 0.00 37.76 3.06
2177 3917 6.544931 TCAATTGGAAGAAGCTCCAGAATATG 59.455 38.462 5.42 0.00 46.20 1.78
2185 3925 4.012374 TGACATCAATTGGAAGAAGCTCC 58.988 43.478 5.42 0.00 35.88 4.70
2188 3928 6.500684 TTACTGACATCAATTGGAAGAAGC 57.499 37.500 5.42 0.00 0.00 3.86
2218 3962 9.646427 CCCAATCTAGATACTTTCAGCTATTAC 57.354 37.037 5.46 0.00 0.00 1.89
2251 3998 9.627123 TCATCCGGAATTCTAGTTTTGATTAAT 57.373 29.630 9.01 0.00 0.00 1.40
2271 4018 6.933521 AGAGTCTAATTCCATTTCATCATCCG 59.066 38.462 0.00 0.00 0.00 4.18
2347 4115 9.390795 CTTGTTGAGAAATCTAAAGTTGACATG 57.609 33.333 0.00 0.00 0.00 3.21
2364 4132 5.550290 TGCATGTCAATCTACTTGTTGAGA 58.450 37.500 0.00 0.00 35.22 3.27
2377 4148 5.801531 AAATAGGATGCATGCATGTCAAT 57.198 34.783 36.73 20.31 36.70 2.57
2403 4174 6.122964 AGCCCCAAGTATTCAAAGTATCTTC 58.877 40.000 0.00 0.00 0.00 2.87
2410 4181 6.773976 TTATTGAGCCCCAAGTATTCAAAG 57.226 37.500 0.00 0.00 38.31 2.77
2419 4192 8.260114 AGTGAAAATATTTTATTGAGCCCCAAG 58.740 33.333 13.34 0.00 38.31 3.61
2520 4294 4.389077 CGGTCTTGACTAGTTTCCATGTTC 59.611 45.833 0.00 0.00 0.00 3.18
2561 4335 5.513233 AGTTGTGATTATCCTGCTTCCATT 58.487 37.500 0.00 0.00 0.00 3.16
2562 4336 5.121380 AGTTGTGATTATCCTGCTTCCAT 57.879 39.130 0.00 0.00 0.00 3.41
2587 4361 2.190981 GTGGCAACTTCGAGTATACGG 58.809 52.381 0.00 0.00 37.61 4.02
2633 4407 5.642063 TCGATAAATCAAGAGAAAGCGGTTT 59.358 36.000 13.24 13.24 0.00 3.27
2702 4476 3.995526 CTGCCGGCAGATGATTAGA 57.004 52.632 46.72 13.46 46.30 2.10
2810 4584 8.788325 ATTGAAGTGTATACCTTAGACCAAAC 57.212 34.615 0.00 0.00 0.00 2.93
2941 4715 6.949117 AGATGGTCTTCAGGATATATGCTT 57.051 37.500 3.64 0.00 0.00 3.91
2971 4745 8.778059 ACCCACTTCCATATCAAACTATCTTTA 58.222 33.333 0.00 0.00 0.00 1.85
3029 4803 4.079970 TCGCCAATCTCGAATAGTCCTAT 58.920 43.478 0.00 0.00 32.53 2.57
3049 4823 5.655488 ACCAACTCATTGAAGTATCTCTCG 58.345 41.667 0.00 0.00 38.15 4.04
3055 4829 9.965824 CTTTTGTTTACCAACTCATTGAAGTAT 57.034 29.630 0.00 0.00 38.15 2.12
3226 5021 2.940158 AGCCTATGAGCATTGCAATGA 58.060 42.857 37.36 20.63 38.70 2.57
3240 5035 4.399219 TCTACGATCAACAGCTAGCCTAT 58.601 43.478 12.13 0.00 0.00 2.57
3254 5049 1.409427 CAGGGGTTGGACTCTACGATC 59.591 57.143 0.00 0.00 0.00 3.69
3282 5077 2.696707 GACCTTACCCGTGATGTGGATA 59.303 50.000 0.00 0.00 0.00 2.59
3291 5086 2.676342 GCATTAAGTGACCTTACCCGTG 59.324 50.000 0.00 0.00 32.91 4.94
3294 5089 3.359695 TGGCATTAAGTGACCTTACCC 57.640 47.619 0.00 0.00 33.64 3.69
3295 5090 4.096382 CACATGGCATTAAGTGACCTTACC 59.904 45.833 10.07 0.00 33.64 2.85
3297 5092 3.694072 GCACATGGCATTAAGTGACCTTA 59.306 43.478 17.66 0.00 43.97 2.69
3395 5190 6.774170 ACATGCTCAAGATAATTAGGATTGCA 59.226 34.615 0.00 0.00 0.00 4.08
3396 5191 7.211966 ACATGCTCAAGATAATTAGGATTGC 57.788 36.000 0.00 0.00 0.00 3.56
3440 5238 1.078759 CTCGCTAGTTTGAGGTGCCG 61.079 60.000 0.00 0.00 0.00 5.69
3470 5268 3.010138 CCTATTTCCTTTGGGACCTCACA 59.990 47.826 0.00 0.00 42.05 3.58
3476 5274 9.508642 CTTTAGATATCCTATTTCCTTTGGGAC 57.491 37.037 0.00 0.00 42.05 4.46
3509 5307 1.276989 TCGACCCAAGTCCAATACCAC 59.723 52.381 0.00 0.00 40.12 4.16
3527 5325 6.535150 TCTGGAAGTTCACTTATGCTATTTCG 59.465 38.462 5.01 0.00 36.11 3.46
3560 5358 4.793353 GCACTTGAGTTGACTTAGACGACT 60.793 45.833 4.37 4.37 35.05 4.18
3565 5363 5.276461 TCAAGCACTTGAGTTGACTTAGA 57.724 39.130 8.99 0.00 43.90 2.10
3676 5474 5.679638 GCCAACTTCTGTCACAAAGTTTGAT 60.680 40.000 22.23 3.90 41.67 2.57
3695 5493 2.682856 TCAACTCTGTCAACTTGCCAAC 59.317 45.455 0.00 0.00 0.00 3.77
3697 5495 2.564771 CTCAACTCTGTCAACTTGCCA 58.435 47.619 0.00 0.00 0.00 4.92
3721 5519 5.790593 TCTAAAGTGTTAGAAATGCGGAGT 58.209 37.500 0.00 0.00 42.24 3.85
3752 5550 0.179215 GCATTCCTTTCGCTGTCACG 60.179 55.000 0.00 0.00 0.00 4.35
3777 5581 9.268282 TCTTATTCAATTTACCTACAGACTCCT 57.732 33.333 0.00 0.00 0.00 3.69
3794 5598 8.812513 ATGTCAATGACTTGGATCTTATTCAA 57.187 30.769 14.97 0.00 33.15 2.69
3831 5636 5.824624 TCATCACCAGGAATTCTAAATGAGC 59.175 40.000 5.23 0.00 0.00 4.26
3835 5640 6.060788 GCTCTCATCACCAGGAATTCTAAAT 58.939 40.000 5.23 0.00 0.00 1.40
3849 5663 2.750657 CCCCAGGGGCTCTCATCAC 61.751 68.421 13.35 0.00 35.35 3.06
3886 5700 1.722507 GCGCAGAACACGAAGTTGC 60.723 57.895 0.30 1.99 41.61 4.17
3892 5706 3.422303 GCCATGCGCAGAACACGA 61.422 61.111 18.32 0.00 37.47 4.35
3973 5787 7.763071 AGTTCCGAAGTGTATACAAATAGTTCC 59.237 37.037 7.25 0.00 0.00 3.62
4003 5817 3.061429 GCTCTTGAAATCTTCCGAAGACG 59.939 47.826 13.12 0.00 41.01 4.18
4009 5823 4.756084 AACAAGCTCTTGAAATCTTCCG 57.244 40.909 15.74 0.00 42.93 4.30
4015 5829 4.985538 TGAGGGTAACAAGCTCTTGAAAT 58.014 39.130 15.74 5.00 42.93 2.17
4132 5949 4.281182 GGCATATCTCCCTCTAGAAACGAA 59.719 45.833 0.00 0.00 0.00 3.85
4156 5973 4.450053 GGAACTGGAGAGATTCAAGGATG 58.550 47.826 0.00 0.00 30.36 3.51
4186 6003 1.360931 CGTCATCATTGGACTGCGCA 61.361 55.000 10.98 10.98 33.11 6.09
4204 6021 1.536766 TCAAAGTCAAAGCTGATGCCG 59.463 47.619 0.00 0.00 40.80 5.69
4210 6027 5.855395 GCTATCAAAGTCAAAGTCAAAGCTG 59.145 40.000 0.00 0.00 0.00 4.24
4230 6047 3.439817 AAGGGAGGTTCCTTAGGCTAT 57.560 47.619 0.00 0.00 44.66 2.97
4260 6077 4.379499 GGGCAAATAAAAAGACTCTGACGG 60.379 45.833 0.00 0.00 0.00 4.79
4261 6078 4.215399 TGGGCAAATAAAAAGACTCTGACG 59.785 41.667 0.00 0.00 0.00 4.35
4289 6106 2.037136 CAGCCTTCTTGTGCTCCGG 61.037 63.158 0.00 0.00 35.12 5.14
4342 6161 4.016706 CGAGGGCTGGGACGGTTT 62.017 66.667 0.00 0.00 36.83 3.27
4409 6233 7.293745 CGTGGAGATCAGCAATATTGAATAAC 58.706 38.462 19.73 6.90 0.00 1.89
4417 6244 4.384056 CTTTCCGTGGAGATCAGCAATAT 58.616 43.478 0.00 0.00 0.00 1.28
4437 6347 2.873133 GTGAGATACACGCCTAGCTT 57.127 50.000 0.00 0.00 39.78 3.74
4490 6410 2.109126 CCGGCCAGCTTAGCTCAAC 61.109 63.158 2.68 0.00 36.40 3.18
4503 6438 0.391966 GTAGTTGGAGATACCCGGCC 59.608 60.000 0.00 0.00 38.00 6.13
4524 6459 7.557719 AGAGAAAAAGAGAAACACCTTGATTCA 59.442 33.333 0.00 0.00 32.41 2.57
4535 6470 8.787852 ACATATTCCACAGAGAAAAAGAGAAAC 58.212 33.333 0.00 0.00 0.00 2.78
4536 6471 8.924511 ACATATTCCACAGAGAAAAAGAGAAA 57.075 30.769 0.00 0.00 0.00 2.52
4555 6490 7.926555 GCCACAGCGTATATAGGAATACATATT 59.073 37.037 6.62 0.00 32.81 1.28
4558 6493 5.186992 TGCCACAGCGTATATAGGAATACAT 59.813 40.000 6.62 0.00 44.31 2.29
4560 6495 5.068234 TGCCACAGCGTATATAGGAATAC 57.932 43.478 6.62 0.00 44.31 1.89
4561 6496 4.770531 ACTGCCACAGCGTATATAGGAATA 59.229 41.667 6.62 0.00 44.31 1.75
4562 6497 3.578716 ACTGCCACAGCGTATATAGGAAT 59.421 43.478 6.62 0.00 44.31 3.01
4564 6499 2.594131 ACTGCCACAGCGTATATAGGA 58.406 47.619 6.62 0.00 44.31 2.94
4565 6500 3.386768 AACTGCCACAGCGTATATAGG 57.613 47.619 0.00 0.00 44.31 2.57
4566 6501 7.421530 AATTAAACTGCCACAGCGTATATAG 57.578 36.000 0.00 0.00 44.31 1.31
4569 6504 7.612668 TTAAATTAAACTGCCACAGCGTATA 57.387 32.000 0.00 0.00 44.31 1.47
4570 6505 6.503589 TTAAATTAAACTGCCACAGCGTAT 57.496 33.333 0.00 0.00 44.31 3.06
4572 6507 4.839668 TTAAATTAAACTGCCACAGCGT 57.160 36.364 0.00 0.00 44.31 5.07
4573 6508 5.494863 GTTTAAATTAAACTGCCACAGCG 57.505 39.130 18.36 0.00 43.50 5.18
4614 6549 8.554490 ACAAATAGTACTCCATCTGTTCCTAT 57.446 34.615 0.00 0.00 0.00 2.57
4616 6551 6.440647 TGACAAATAGTACTCCATCTGTTCCT 59.559 38.462 0.00 0.00 0.00 3.36
4617 6552 6.640518 TGACAAATAGTACTCCATCTGTTCC 58.359 40.000 0.00 0.00 0.00 3.62
4618 6553 7.548097 TCTGACAAATAGTACTCCATCTGTTC 58.452 38.462 0.00 0.00 0.00 3.18
4622 6557 6.670027 AGGTTCTGACAAATAGTACTCCATCT 59.330 38.462 0.00 0.00 0.00 2.90
4624 6559 6.875972 AGGTTCTGACAAATAGTACTCCAT 57.124 37.500 0.00 0.00 0.00 3.41
4625 6560 6.042781 ACAAGGTTCTGACAAATAGTACTCCA 59.957 38.462 0.00 0.00 0.00 3.86
4626 6561 6.465084 ACAAGGTTCTGACAAATAGTACTCC 58.535 40.000 0.00 0.00 0.00 3.85
4627 6562 7.379750 AGACAAGGTTCTGACAAATAGTACTC 58.620 38.462 0.00 0.00 0.00 2.59
4629 6564 7.964604 AAGACAAGGTTCTGACAAATAGTAC 57.035 36.000 0.00 0.00 0.00 2.73
4631 6566 7.283329 AGAAAGACAAGGTTCTGACAAATAGT 58.717 34.615 0.00 0.00 32.84 2.12
4632 6567 7.736447 AGAAAGACAAGGTTCTGACAAATAG 57.264 36.000 0.00 0.00 32.84 1.73
4634 6569 7.410120 AAAGAAAGACAAGGTTCTGACAAAT 57.590 32.000 0.00 0.00 34.33 2.32
4635 6570 6.834168 AAAGAAAGACAAGGTTCTGACAAA 57.166 33.333 0.00 0.00 34.33 2.83
4637 6572 6.180472 AGAAAAGAAAGACAAGGTTCTGACA 58.820 36.000 0.00 0.00 34.33 3.58
4638 6573 6.685527 AGAAAAGAAAGACAAGGTTCTGAC 57.314 37.500 0.00 0.00 34.33 3.51
4639 6574 7.611855 AGAAAGAAAAGAAAGACAAGGTTCTGA 59.388 33.333 0.00 0.00 34.33 3.27
4642 6577 9.110502 TCTAGAAAGAAAAGAAAGACAAGGTTC 57.889 33.333 0.00 0.00 0.00 3.62
4643 6578 9.114952 CTCTAGAAAGAAAAGAAAGACAAGGTT 57.885 33.333 0.00 0.00 0.00 3.50
4682 6617 8.294954 TGTTGTTTTTACAGTTGATAGGGAAA 57.705 30.769 0.00 0.00 0.00 3.13
4703 6642 5.375417 TGCATTCAGATTGGTAACTGTTG 57.625 39.130 2.69 0.00 35.84 3.33
4753 6694 8.476064 ACATGTGGAATATGCATGGTTATTTA 57.524 30.769 10.16 0.00 39.27 1.40
4769 6712 6.533730 ACTCTCAGAAAACATACATGTGGAA 58.466 36.000 9.11 0.00 41.61 3.53
4833 6776 6.241645 CCTTCCAGTACTTTTCTTTCTCCAT 58.758 40.000 0.00 0.00 0.00 3.41
4834 6777 5.621193 CCTTCCAGTACTTTTCTTTCTCCA 58.379 41.667 0.00 0.00 0.00 3.86
4857 6803 4.972514 AATAGAGCAAGCAAAGGTAAGC 57.027 40.909 0.00 0.00 0.00 3.09
4861 6807 7.611855 ACAGTAATAAATAGAGCAAGCAAAGGT 59.388 33.333 0.00 0.00 0.00 3.50
4868 6814 9.302345 TCGAAAGACAGTAATAAATAGAGCAAG 57.698 33.333 0.00 0.00 33.31 4.01
4876 6822 8.237267 CCTTTGCTTCGAAAGACAGTAATAAAT 58.763 33.333 0.00 0.00 41.84 1.40
4879 6825 6.228258 ACCTTTGCTTCGAAAGACAGTAATA 58.772 36.000 0.00 0.00 41.84 0.98
4880 6826 5.063880 ACCTTTGCTTCGAAAGACAGTAAT 58.936 37.500 0.00 0.00 41.84 1.89
4884 6830 3.971032 AACCTTTGCTTCGAAAGACAG 57.029 42.857 0.00 0.00 41.84 3.51
4913 6859 9.323985 TGCTACAAAAGAAAACAAAGCAAATAT 57.676 25.926 0.00 0.00 35.91 1.28
4914 6860 8.709386 TGCTACAAAAGAAAACAAAGCAAATA 57.291 26.923 0.00 0.00 35.91 1.40
5022 6981 8.798402 CCTTTACTACAAAAGAGAGAGAGAGAA 58.202 37.037 0.00 0.00 38.50 2.87
5024 6983 8.343168 TCCTTTACTACAAAAGAGAGAGAGAG 57.657 38.462 0.00 0.00 38.50 3.20
5025 6984 8.707796 TTCCTTTACTACAAAAGAGAGAGAGA 57.292 34.615 0.00 0.00 38.50 3.10
5026 6985 9.765795 TTTTCCTTTACTACAAAAGAGAGAGAG 57.234 33.333 0.00 0.00 38.50 3.20
5071 7035 9.676861 AAACTACTAAACTCCACAAAGTAAACT 57.323 29.630 0.00 0.00 0.00 2.66
5088 7052 8.667463 GTGGACAACAAAGTAACAAACTACTAA 58.333 33.333 0.00 0.00 37.50 2.24
5096 7060 6.416415 TCCTAAGTGGACAACAAAGTAACAA 58.584 36.000 0.00 0.00 40.56 2.83
5153 7117 3.065233 CACACACACACACTAAACAGCAT 59.935 43.478 0.00 0.00 0.00 3.79
5157 7121 3.403968 ACACACACACACACACTAAACA 58.596 40.909 0.00 0.00 0.00 2.83
5158 7122 3.433957 TGACACACACACACACACTAAAC 59.566 43.478 0.00 0.00 0.00 2.01
5162 7126 2.076100 CTTGACACACACACACACACT 58.924 47.619 0.00 0.00 0.00 3.55
5173 7143 3.270877 AGGACACAGAAACTTGACACAC 58.729 45.455 0.00 0.00 0.00 3.82
5176 7146 5.336372 CCAAAAAGGACACAGAAACTTGACA 60.336 40.000 0.00 0.00 41.22 3.58
5178 7148 4.770010 ACCAAAAAGGACACAGAAACTTGA 59.230 37.500 0.00 0.00 41.22 3.02
5179 7149 4.864247 CACCAAAAAGGACACAGAAACTTG 59.136 41.667 0.00 0.00 41.22 3.16
5180 7150 4.526650 ACACCAAAAAGGACACAGAAACTT 59.473 37.500 0.00 0.00 41.22 2.66
5181 7151 4.086457 ACACCAAAAAGGACACAGAAACT 58.914 39.130 0.00 0.00 41.22 2.66
5186 7156 4.340950 ACCAATACACCAAAAAGGACACAG 59.659 41.667 0.00 0.00 41.22 3.66
5188 7158 4.929819 ACCAATACACCAAAAAGGACAC 57.070 40.909 0.00 0.00 41.22 3.67
5211 7181 3.756434 ACACATATAAACACACACCTGCC 59.244 43.478 0.00 0.00 0.00 4.85
5212 7182 5.371115 AACACATATAAACACACACCTGC 57.629 39.130 0.00 0.00 0.00 4.85
5213 7183 7.202016 AGAAACACATATAAACACACACCTG 57.798 36.000 0.00 0.00 0.00 4.00
5215 7185 6.073440 ACGAGAAACACATATAAACACACACC 60.073 38.462 0.00 0.00 0.00 4.16
5245 7228 1.084084 CCCCCTACCCTTCCCAGAA 59.916 63.158 0.00 0.00 0.00 3.02
5334 7577 8.155821 TGGTTTGACATTTAACGAGTTTATGA 57.844 30.769 13.78 0.00 0.00 2.15
5372 7615 9.274065 GCTACAAATAAAAGAGACGGTAAATTG 57.726 33.333 0.00 0.00 0.00 2.32
5380 7623 9.612620 AAAATTCAGCTACAAATAAAAGAGACG 57.387 29.630 0.00 0.00 0.00 4.18
5408 7651 8.823818 AGCAAGAAAAATGAAGAAAACAATGAG 58.176 29.630 0.00 0.00 0.00 2.90
5410 7653 8.605746 TGAGCAAGAAAAATGAAGAAAACAATG 58.394 29.630 0.00 0.00 0.00 2.82
5411 7654 8.721019 TGAGCAAGAAAAATGAAGAAAACAAT 57.279 26.923 0.00 0.00 0.00 2.71
5412 7655 8.721019 ATGAGCAAGAAAAATGAAGAAAACAA 57.279 26.923 0.00 0.00 0.00 2.83
5413 7656 7.980662 TGATGAGCAAGAAAAATGAAGAAAACA 59.019 29.630 0.00 0.00 0.00 2.83
5414 7657 8.356533 TGATGAGCAAGAAAAATGAAGAAAAC 57.643 30.769 0.00 0.00 0.00 2.43
5431 7674 4.099419 ACGATGGTATACACTTGATGAGCA 59.901 41.667 5.01 0.00 0.00 4.26
5432 7675 4.445718 CACGATGGTATACACTTGATGAGC 59.554 45.833 5.01 0.00 0.00 4.26
5433 7676 4.984785 CCACGATGGTATACACTTGATGAG 59.015 45.833 5.01 0.00 31.35 2.90
5434 7677 4.944048 CCACGATGGTATACACTTGATGA 58.056 43.478 5.01 0.00 31.35 2.92
5469 7712 6.098124 ACATGAACAAGAAAATGGAGGAAACA 59.902 34.615 0.00 0.00 0.00 2.83


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.