Multiple sequence alignment - TraesCS4A01G490500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G490500 chr4A 100.000 4169 0 0 1 4169 740590788 740586620 0.000000e+00 7699.0
1 TraesCS4A01G490500 chr4A 76.246 2307 415 78 1443 3708 740071560 740073774 0.000000e+00 1101.0
2 TraesCS4A01G490500 chr4A 82.108 1129 139 24 279 1374 741971367 741972465 0.000000e+00 907.0
3 TraesCS4A01G490500 chr4A 83.506 867 110 19 1429 2277 739818323 739817472 0.000000e+00 778.0
4 TraesCS4A01G490500 chr4A 81.732 947 140 16 279 1194 740872977 740873921 0.000000e+00 760.0
5 TraesCS4A01G490500 chr4A 78.798 1198 196 38 2506 3678 739817255 739816091 0.000000e+00 752.0
6 TraesCS4A01G490500 chr4A 80.354 1018 160 25 2740 3735 740892696 740893695 0.000000e+00 736.0
7 TraesCS4A01G490500 chr4A 92.015 526 39 3 846 1370 741472458 741471935 0.000000e+00 736.0
8 TraesCS4A01G490500 chr4A 82.353 867 125 19 1429 2277 733960772 733961628 0.000000e+00 728.0
9 TraesCS4A01G490500 chr4A 82.394 869 121 21 280 1132 739828827 739827975 0.000000e+00 728.0
10 TraesCS4A01G490500 chr4A 82.909 825 111 21 2863 3679 742276800 742277602 0.000000e+00 715.0
11 TraesCS4A01G490500 chr4A 81.839 870 112 19 280 1132 733931394 733932234 0.000000e+00 689.0
12 TraesCS4A01G490500 chr4A 86.993 592 75 2 1557 2147 741471775 741471185 0.000000e+00 665.0
13 TraesCS4A01G490500 chr4A 82.888 748 92 16 1541 2277 741972589 741973311 1.260000e-179 640.0
14 TraesCS4A01G490500 chr4A 79.430 948 152 21 279 1192 739802756 739801818 7.610000e-177 630.0
15 TraesCS4A01G490500 chr4A 77.873 931 135 43 2799 3708 741973605 741974485 2.870000e-141 512.0
16 TraesCS4A01G490500 chr4A 80.935 535 71 17 871 1378 742274595 742275125 1.090000e-105 394.0
17 TraesCS4A01G490500 chr4A 75.182 826 164 28 2505 3316 733961820 733962618 6.630000e-93 351.0
18 TraesCS4A01G490500 chr4A 86.577 149 17 3 1232 1378 740891261 740891408 1.200000e-35 161.0
19 TraesCS4A01G490500 chr4A 97.368 38 1 0 2669 2706 733962123 733962160 9.670000e-07 65.8
20 TraesCS4A01G490500 chr7A 88.188 1126 98 17 281 1378 3007869 3008987 0.000000e+00 1310.0
21 TraesCS4A01G490500 chr7A 79.538 1300 194 38 2613 3883 2579863 2581119 0.000000e+00 861.0
22 TraesCS4A01G490500 chr7A 83.659 869 114 20 1429 2277 3573415 3572555 0.000000e+00 793.0
23 TraesCS4A01G490500 chr7A 86.351 740 81 15 1554 2277 3009161 3009896 0.000000e+00 789.0
24 TraesCS4A01G490500 chr7A 82.365 947 118 22 279 1193 2859948 2860877 0.000000e+00 778.0
25 TraesCS4A01G490500 chr7A 85.929 732 88 10 1552 2277 2578898 2579620 0.000000e+00 767.0
26 TraesCS4A01G490500 chr7A 77.845 1318 198 46 2622 3881 3010220 3011501 0.000000e+00 730.0
27 TraesCS4A01G490500 chr7A 77.940 1233 201 40 2506 3708 3629268 3628077 0.000000e+00 704.0
28 TraesCS4A01G490500 chr7A 78.855 1083 175 34 2616 3678 3572303 3571255 0.000000e+00 682.0
29 TraesCS4A01G490500 chr7A 85.398 678 76 15 1616 2277 3630146 3629476 0.000000e+00 682.0
30 TraesCS4A01G490500 chr7A 81.923 520 78 9 875 1381 3573917 3573401 3.850000e-115 425.0
31 TraesCS4A01G490500 chr7A 80.989 526 77 14 871 1374 3324078 3323554 3.020000e-106 396.0
32 TraesCS4A01G490500 chr7A 78.960 423 45 25 3460 3858 2862842 2863244 8.950000e-62 248.0
33 TraesCS4A01G490500 chr7A 85.897 156 20 2 1221 1374 2578607 2578762 9.270000e-37 165.0
34 TraesCS4A01G490500 chr7A 89.381 113 4 4 41 149 3578044 3577936 7.270000e-28 135.0
35 TraesCS4A01G490500 chr7A 89.744 78 4 2 4092 4169 2667852 2667925 3.430000e-16 97.1
36 TraesCS4A01G490500 chr7A 100.000 51 0 0 4119 4169 2754756 2754706 1.230000e-15 95.3
37 TraesCS4A01G490500 chr7A 91.935 62 4 1 4064 4124 2760000 2759939 7.430000e-13 86.1
38 TraesCS4A01G490500 chr7A 100.000 35 0 0 4024 4058 3011636 3011670 9.670000e-07 65.8
39 TraesCS4A01G490500 chr7D 85.112 1209 163 13 1429 2633 3432743 3431548 0.000000e+00 1219.0
40 TraesCS4A01G490500 chr7D 81.716 1154 162 25 2625 3753 3431355 3430226 0.000000e+00 917.0
41 TraesCS4A01G490500 chr7D 82.253 941 128 14 279 1194 3740577 3741503 0.000000e+00 776.0
42 TraesCS4A01G490500 chr7D 77.410 1421 242 47 2505 3888 3755578 3756956 0.000000e+00 773.0
43 TraesCS4A01G490500 chr7D 85.363 731 94 8 1552 2277 3754643 3755365 0.000000e+00 745.0
44 TraesCS4A01G490500 chr7D 78.007 1114 195 38 2506 3604 3769524 3768446 0.000000e+00 654.0
45 TraesCS4A01G490500 chr7D 83.663 404 64 2 281 683 3435057 3434655 3.040000e-101 379.0
46 TraesCS4A01G490500 chr7D 97.143 105 2 1 4065 4168 3758592 3758696 4.280000e-40 176.0
47 TraesCS4A01G490500 chr7D 85.897 156 20 2 1221 1374 3754352 3754507 9.270000e-37 165.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G490500 chr4A 740586620 740590788 4168 True 7699.000000 7699 100.000000 1 4169 1 chr4A.!!$R3 4168
1 TraesCS4A01G490500 chr4A 740071560 740073774 2214 False 1101.000000 1101 76.246000 1443 3708 1 chr4A.!!$F2 2265
2 TraesCS4A01G490500 chr4A 739816091 739818323 2232 True 765.000000 778 81.152000 1429 3678 2 chr4A.!!$R4 2249
3 TraesCS4A01G490500 chr4A 740872977 740873921 944 False 760.000000 760 81.732000 279 1194 1 chr4A.!!$F3 915
4 TraesCS4A01G490500 chr4A 739827975 739828827 852 True 728.000000 728 82.394000 280 1132 1 chr4A.!!$R2 852
5 TraesCS4A01G490500 chr4A 741471185 741472458 1273 True 700.500000 736 89.504000 846 2147 2 chr4A.!!$R5 1301
6 TraesCS4A01G490500 chr4A 733931394 733932234 840 False 689.000000 689 81.839000 280 1132 1 chr4A.!!$F1 852
7 TraesCS4A01G490500 chr4A 741971367 741974485 3118 False 686.333333 907 80.956333 279 3708 3 chr4A.!!$F6 3429
8 TraesCS4A01G490500 chr4A 739801818 739802756 938 True 630.000000 630 79.430000 279 1192 1 chr4A.!!$R1 913
9 TraesCS4A01G490500 chr4A 742274595 742277602 3007 False 554.500000 715 81.922000 871 3679 2 chr4A.!!$F7 2808
10 TraesCS4A01G490500 chr4A 740891261 740893695 2434 False 448.500000 736 83.465500 1232 3735 2 chr4A.!!$F5 2503
11 TraesCS4A01G490500 chr4A 733960772 733962618 1846 False 381.600000 728 84.967667 1429 3316 3 chr4A.!!$F4 1887
12 TraesCS4A01G490500 chr7A 3007869 3011670 3801 False 723.700000 1310 88.096000 281 4058 4 chr7A.!!$F4 3777
13 TraesCS4A01G490500 chr7A 3628077 3630146 2069 True 693.000000 704 81.669000 1616 3708 2 chr7A.!!$R6 2092
14 TraesCS4A01G490500 chr7A 3571255 3573917 2662 True 633.333333 793 81.479000 875 3678 3 chr7A.!!$R5 2803
15 TraesCS4A01G490500 chr7A 2578607 2581119 2512 False 597.666667 861 83.788000 1221 3883 3 chr7A.!!$F2 2662
16 TraesCS4A01G490500 chr7A 2859948 2863244 3296 False 513.000000 778 80.662500 279 3858 2 chr7A.!!$F3 3579
17 TraesCS4A01G490500 chr7A 3323554 3324078 524 True 396.000000 396 80.989000 871 1374 1 chr7A.!!$R3 503
18 TraesCS4A01G490500 chr7D 3430226 3435057 4831 True 838.333333 1219 83.497000 281 3753 3 chr7D.!!$R2 3472
19 TraesCS4A01G490500 chr7D 3740577 3741503 926 False 776.000000 776 82.253000 279 1194 1 chr7D.!!$F1 915
20 TraesCS4A01G490500 chr7D 3768446 3769524 1078 True 654.000000 654 78.007000 2506 3604 1 chr7D.!!$R1 1098
21 TraesCS4A01G490500 chr7D 3754352 3758696 4344 False 464.750000 773 86.453250 1221 4168 4 chr7D.!!$F2 2947

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
225 226 0.033011 AGTAGATCGGGGAGTGCACT 60.033 55.0 21.88 21.88 0.00 4.40 F
226 227 0.103208 GTAGATCGGGGAGTGCACTG 59.897 60.0 27.27 10.13 0.00 3.66 F
450 451 0.107312 AGCATGTGCACTCCATCCTC 60.107 55.0 19.41 0.00 45.16 3.71 F
1626 3285 0.106769 TGAGCATGTGTGGTGGTGTT 60.107 50.0 0.00 0.00 35.91 3.32 F
2529 4313 0.179089 CGGAGTTGCCCAGAGAGATG 60.179 60.0 0.00 0.00 0.00 2.90 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1378 2791 0.179062 GGCCTCTGCATCTTGACGAT 60.179 55.0 0.0 0.0 40.13 3.73 R
1382 2795 0.179065 CATCGGCCTCTGCATCTTGA 60.179 55.0 0.0 0.0 40.13 3.02 R
2440 4224 0.105039 CCAATCTCACGGGGTAGCTC 59.895 60.0 0.0 0.0 0.00 4.09 R
2788 4855 0.169672 CTTGGCAGCTTTGTGATCCG 59.830 55.0 0.0 0.0 0.00 4.18 R
3773 6232 0.106769 TGCTTGAAACCTCCTGTGCA 60.107 50.0 0.0 0.0 0.00 4.57 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 4.526770 CTGCGGAGTGATGATGCA 57.473 55.556 0.00 0.00 0.00 3.96
18 19 2.012237 CTGCGGAGTGATGATGCAC 58.988 57.895 0.00 0.00 39.05 4.57
27 28 4.038521 ATGATGCACTCATCCGCG 57.961 55.556 0.00 0.00 46.60 6.46
28 29 1.144716 ATGATGCACTCATCCGCGT 59.855 52.632 4.92 0.00 46.60 6.01
29 30 1.156034 ATGATGCACTCATCCGCGTG 61.156 55.000 4.92 0.00 46.60 5.34
44 45 2.975799 GTGCCCGCCTCAAACGAA 60.976 61.111 0.00 0.00 0.00 3.85
45 46 2.668212 TGCCCGCCTCAAACGAAG 60.668 61.111 0.00 0.00 0.00 3.79
46 47 4.103103 GCCCGCCTCAAACGAAGC 62.103 66.667 0.00 0.00 0.00 3.86
47 48 2.358737 CCCGCCTCAAACGAAGCT 60.359 61.111 0.00 0.00 0.00 3.74
48 49 2.680913 CCCGCCTCAAACGAAGCTG 61.681 63.158 0.00 0.00 0.00 4.24
49 50 1.961277 CCGCCTCAAACGAAGCTGT 60.961 57.895 0.00 0.00 0.00 4.40
50 51 1.205064 CGCCTCAAACGAAGCTGTG 59.795 57.895 0.00 0.00 0.00 3.66
51 52 1.498865 CGCCTCAAACGAAGCTGTGT 61.499 55.000 0.00 0.00 0.00 3.72
52 53 0.040958 GCCTCAAACGAAGCTGTGTG 60.041 55.000 0.00 0.00 0.00 3.82
53 54 0.040958 CCTCAAACGAAGCTGTGTGC 60.041 55.000 0.00 0.00 43.29 4.57
77 78 3.128259 GCACATGCACTCGAGAAGA 57.872 52.632 21.68 1.63 41.59 2.87
78 79 1.432514 GCACATGCACTCGAGAAGAA 58.567 50.000 21.68 6.07 41.59 2.52
79 80 1.127582 GCACATGCACTCGAGAAGAAC 59.872 52.381 21.68 3.77 41.59 3.01
80 81 2.407090 CACATGCACTCGAGAAGAACA 58.593 47.619 21.68 9.55 0.00 3.18
81 82 2.411069 CACATGCACTCGAGAAGAACAG 59.589 50.000 21.68 5.06 0.00 3.16
82 83 2.297315 ACATGCACTCGAGAAGAACAGA 59.703 45.455 21.68 0.00 0.00 3.41
83 84 3.243873 ACATGCACTCGAGAAGAACAGAA 60.244 43.478 21.68 0.00 0.00 3.02
84 85 3.667497 TGCACTCGAGAAGAACAGAAT 57.333 42.857 21.68 0.00 0.00 2.40
85 86 3.320626 TGCACTCGAGAAGAACAGAATG 58.679 45.455 21.68 3.56 46.00 2.67
86 87 2.670414 GCACTCGAGAAGAACAGAATGG 59.330 50.000 21.68 0.00 43.62 3.16
87 88 2.670414 CACTCGAGAAGAACAGAATGGC 59.330 50.000 21.68 0.00 43.62 4.40
88 89 2.275318 CTCGAGAAGAACAGAATGGCC 58.725 52.381 6.58 0.00 43.62 5.36
89 90 1.066143 TCGAGAAGAACAGAATGGCCC 60.066 52.381 0.00 0.00 43.62 5.80
90 91 1.756430 GAGAAGAACAGAATGGCCCC 58.244 55.000 0.00 0.00 43.62 5.80
91 92 1.004745 GAGAAGAACAGAATGGCCCCA 59.995 52.381 0.00 0.00 43.62 4.96
92 93 1.642762 AGAAGAACAGAATGGCCCCAT 59.357 47.619 0.00 0.00 43.62 4.00
93 94 2.027385 GAAGAACAGAATGGCCCCATC 58.973 52.381 0.00 0.00 43.62 3.51
94 95 1.002069 AGAACAGAATGGCCCCATCA 58.998 50.000 0.00 0.00 43.62 3.07
95 96 1.572415 AGAACAGAATGGCCCCATCAT 59.428 47.619 0.00 0.00 43.62 2.45
96 97 1.959282 GAACAGAATGGCCCCATCATC 59.041 52.381 0.00 0.00 43.62 2.92
97 98 0.186873 ACAGAATGGCCCCATCATCC 59.813 55.000 0.00 0.00 43.62 3.51
98 99 0.541296 CAGAATGGCCCCATCATCCC 60.541 60.000 0.00 0.00 35.31 3.85
99 100 1.000590 AGAATGGCCCCATCATCCCA 61.001 55.000 0.00 0.00 35.31 4.37
100 101 0.115745 GAATGGCCCCATCATCCCAT 59.884 55.000 0.00 0.00 39.66 4.00
101 102 0.178915 AATGGCCCCATCATCCCATG 60.179 55.000 0.00 0.00 38.07 3.66
102 103 2.602568 GGCCCCATCATCCCATGC 60.603 66.667 0.00 0.00 0.00 4.06
103 104 2.199257 GCCCCATCATCCCATGCA 59.801 61.111 0.00 0.00 0.00 3.96
104 105 2.205152 GCCCCATCATCCCATGCAC 61.205 63.158 0.00 0.00 0.00 4.57
105 106 1.230783 CCCCATCATCCCATGCACA 59.769 57.895 0.00 0.00 0.00 4.57
106 107 0.178944 CCCCATCATCCCATGCACAT 60.179 55.000 0.00 0.00 0.00 3.21
107 108 1.712056 CCCATCATCCCATGCACATT 58.288 50.000 0.00 0.00 0.00 2.71
108 109 2.491271 CCCCATCATCCCATGCACATTA 60.491 50.000 0.00 0.00 0.00 1.90
109 110 3.437213 CCCATCATCCCATGCACATTAT 58.563 45.455 0.00 0.00 0.00 1.28
110 111 3.835978 CCCATCATCCCATGCACATTATT 59.164 43.478 0.00 0.00 0.00 1.40
111 112 5.018149 CCCATCATCCCATGCACATTATTA 58.982 41.667 0.00 0.00 0.00 0.98
112 113 5.659525 CCCATCATCCCATGCACATTATTAT 59.340 40.000 0.00 0.00 0.00 1.28
113 114 6.834969 CCCATCATCCCATGCACATTATTATA 59.165 38.462 0.00 0.00 0.00 0.98
114 115 7.342541 CCCATCATCCCATGCACATTATTATAA 59.657 37.037 0.00 0.00 0.00 0.98
115 116 8.410912 CCATCATCCCATGCACATTATTATAAG 58.589 37.037 0.00 0.00 0.00 1.73
116 117 8.963725 CATCATCCCATGCACATTATTATAAGT 58.036 33.333 0.00 0.00 0.00 2.24
120 121 9.979897 ATCCCATGCACATTATTATAAGTATGT 57.020 29.630 8.63 8.63 0.00 2.29
153 154 7.085052 AGTTAAATAAAAGATTCCTCGCACC 57.915 36.000 0.00 0.00 0.00 5.01
154 155 6.657541 AGTTAAATAAAAGATTCCTCGCACCA 59.342 34.615 0.00 0.00 0.00 4.17
155 156 4.965119 AATAAAAGATTCCTCGCACCAC 57.035 40.909 0.00 0.00 0.00 4.16
156 157 2.270352 AAAAGATTCCTCGCACCACA 57.730 45.000 0.00 0.00 0.00 4.17
157 158 1.813513 AAAGATTCCTCGCACCACAG 58.186 50.000 0.00 0.00 0.00 3.66
158 159 0.674895 AAGATTCCTCGCACCACAGC 60.675 55.000 0.00 0.00 0.00 4.40
167 168 3.699894 CACCACAGCGGCTCTCCT 61.700 66.667 0.00 0.00 39.03 3.69
168 169 3.386237 ACCACAGCGGCTCTCCTC 61.386 66.667 0.00 0.00 39.03 3.71
169 170 3.073735 CCACAGCGGCTCTCCTCT 61.074 66.667 0.00 0.00 0.00 3.69
170 171 2.493973 CACAGCGGCTCTCCTCTC 59.506 66.667 0.00 0.00 0.00 3.20
171 172 2.757917 ACAGCGGCTCTCCTCTCC 60.758 66.667 0.00 0.00 0.00 3.71
172 173 2.757508 CAGCGGCTCTCCTCTCCA 60.758 66.667 0.00 0.00 0.00 3.86
173 174 2.757917 AGCGGCTCTCCTCTCCAC 60.758 66.667 0.00 0.00 0.00 4.02
174 175 2.757917 GCGGCTCTCCTCTCCACT 60.758 66.667 0.00 0.00 0.00 4.00
175 176 2.781158 GCGGCTCTCCTCTCCACTC 61.781 68.421 0.00 0.00 0.00 3.51
176 177 1.379176 CGGCTCTCCTCTCCACTCA 60.379 63.158 0.00 0.00 0.00 3.41
177 178 0.754957 CGGCTCTCCTCTCCACTCAT 60.755 60.000 0.00 0.00 0.00 2.90
178 179 1.039856 GGCTCTCCTCTCCACTCATC 58.960 60.000 0.00 0.00 0.00 2.92
179 180 1.411501 GGCTCTCCTCTCCACTCATCT 60.412 57.143 0.00 0.00 0.00 2.90
180 181 1.956477 GCTCTCCTCTCCACTCATCTC 59.044 57.143 0.00 0.00 0.00 2.75
181 182 2.586425 CTCTCCTCTCCACTCATCTCC 58.414 57.143 0.00 0.00 0.00 3.71
182 183 2.175499 CTCTCCTCTCCACTCATCTCCT 59.825 54.545 0.00 0.00 0.00 3.69
183 184 2.091939 TCTCCTCTCCACTCATCTCCTG 60.092 54.545 0.00 0.00 0.00 3.86
184 185 1.063341 TCCTCTCCACTCATCTCCTGG 60.063 57.143 0.00 0.00 0.00 4.45
185 186 0.752054 CTCTCCACTCATCTCCTGGC 59.248 60.000 0.00 0.00 0.00 4.85
186 187 1.039785 TCTCCACTCATCTCCTGGCG 61.040 60.000 0.00 0.00 0.00 5.69
187 188 1.305297 TCCACTCATCTCCTGGCGT 60.305 57.895 0.00 0.00 0.00 5.68
188 189 0.033503 TCCACTCATCTCCTGGCGTA 60.034 55.000 0.00 0.00 0.00 4.42
189 190 0.824109 CCACTCATCTCCTGGCGTAA 59.176 55.000 0.00 0.00 0.00 3.18
190 191 1.202463 CCACTCATCTCCTGGCGTAAG 60.202 57.143 0.00 0.00 43.44 2.34
191 192 1.478510 CACTCATCTCCTGGCGTAAGT 59.521 52.381 0.00 0.00 41.68 2.24
192 193 2.093973 CACTCATCTCCTGGCGTAAGTT 60.094 50.000 0.00 0.00 41.68 2.66
193 194 2.567615 ACTCATCTCCTGGCGTAAGTTT 59.432 45.455 0.00 0.00 41.68 2.66
194 195 3.190874 CTCATCTCCTGGCGTAAGTTTC 58.809 50.000 0.00 0.00 41.68 2.78
195 196 2.832129 TCATCTCCTGGCGTAAGTTTCT 59.168 45.455 0.00 0.00 41.68 2.52
196 197 3.119101 TCATCTCCTGGCGTAAGTTTCTC 60.119 47.826 0.00 0.00 41.68 2.87
197 198 1.549170 TCTCCTGGCGTAAGTTTCTCC 59.451 52.381 0.00 0.00 41.68 3.71
198 199 1.275291 CTCCTGGCGTAAGTTTCTCCA 59.725 52.381 0.00 0.00 41.68 3.86
199 200 1.695242 TCCTGGCGTAAGTTTCTCCAA 59.305 47.619 0.00 0.00 41.68 3.53
200 201 2.304761 TCCTGGCGTAAGTTTCTCCAAT 59.695 45.455 0.00 0.00 41.68 3.16
201 202 3.081804 CCTGGCGTAAGTTTCTCCAATT 58.918 45.455 0.00 0.00 41.68 2.32
202 203 3.127030 CCTGGCGTAAGTTTCTCCAATTC 59.873 47.826 0.00 0.00 41.68 2.17
203 204 3.745799 TGGCGTAAGTTTCTCCAATTCA 58.254 40.909 0.00 0.00 41.68 2.57
204 205 4.138290 TGGCGTAAGTTTCTCCAATTCAA 58.862 39.130 0.00 0.00 41.68 2.69
205 206 4.580995 TGGCGTAAGTTTCTCCAATTCAAA 59.419 37.500 0.00 0.00 41.68 2.69
206 207 5.067936 TGGCGTAAGTTTCTCCAATTCAAAA 59.932 36.000 0.00 0.00 41.68 2.44
207 208 5.629435 GGCGTAAGTTTCTCCAATTCAAAAG 59.371 40.000 0.00 0.00 41.68 2.27
208 209 6.206498 GCGTAAGTTTCTCCAATTCAAAAGT 58.794 36.000 0.00 0.00 41.68 2.66
209 210 7.357303 GCGTAAGTTTCTCCAATTCAAAAGTA 58.643 34.615 0.00 0.00 41.68 2.24
210 211 7.534239 GCGTAAGTTTCTCCAATTCAAAAGTAG 59.466 37.037 0.00 0.00 41.68 2.57
211 212 8.770828 CGTAAGTTTCTCCAATTCAAAAGTAGA 58.229 33.333 0.00 0.00 0.00 2.59
214 215 8.034058 AGTTTCTCCAATTCAAAAGTAGATCG 57.966 34.615 0.00 0.00 0.00 3.69
215 216 6.985188 TTCTCCAATTCAAAAGTAGATCGG 57.015 37.500 0.00 0.00 0.00 4.18
216 217 5.428253 TCTCCAATTCAAAAGTAGATCGGG 58.572 41.667 0.00 0.00 0.00 5.14
217 218 4.523083 TCCAATTCAAAAGTAGATCGGGG 58.477 43.478 0.00 0.00 0.00 5.73
218 219 4.226394 TCCAATTCAAAAGTAGATCGGGGA 59.774 41.667 0.00 0.00 0.00 4.81
219 220 4.576463 CCAATTCAAAAGTAGATCGGGGAG 59.424 45.833 0.00 0.00 0.00 4.30
220 221 5.186198 CAATTCAAAAGTAGATCGGGGAGT 58.814 41.667 0.00 0.00 0.00 3.85
221 222 3.887621 TCAAAAGTAGATCGGGGAGTG 57.112 47.619 0.00 0.00 0.00 3.51
222 223 2.093658 TCAAAAGTAGATCGGGGAGTGC 60.094 50.000 0.00 0.00 0.00 4.40
223 224 1.568504 AAAGTAGATCGGGGAGTGCA 58.431 50.000 0.00 0.00 0.00 4.57
224 225 0.824759 AAGTAGATCGGGGAGTGCAC 59.175 55.000 9.40 9.40 0.00 4.57
225 226 0.033011 AGTAGATCGGGGAGTGCACT 60.033 55.000 21.88 21.88 0.00 4.40
226 227 0.103208 GTAGATCGGGGAGTGCACTG 59.897 60.000 27.27 10.13 0.00 3.66
227 228 1.676678 TAGATCGGGGAGTGCACTGC 61.677 60.000 28.46 28.46 0.00 4.40
228 229 3.315142 GATCGGGGAGTGCACTGCA 62.315 63.158 34.97 18.75 35.89 4.41
237 238 3.186106 TGCACTGCACACACACAC 58.814 55.556 0.00 0.00 31.71 3.82
238 239 1.673665 TGCACTGCACACACACACA 60.674 52.632 0.00 0.00 31.71 3.72
239 240 1.226379 GCACTGCACACACACACAC 60.226 57.895 0.00 0.00 0.00 3.82
240 241 1.921045 GCACTGCACACACACACACA 61.921 55.000 0.00 0.00 0.00 3.72
241 242 0.179192 CACTGCACACACACACACAC 60.179 55.000 0.00 0.00 0.00 3.82
242 243 0.605050 ACTGCACACACACACACACA 60.605 50.000 0.00 0.00 0.00 3.72
243 244 0.179192 CTGCACACACACACACACAC 60.179 55.000 0.00 0.00 0.00 3.82
244 245 0.886490 TGCACACACACACACACACA 60.886 50.000 0.00 0.00 0.00 3.72
245 246 0.454285 GCACACACACACACACACAC 60.454 55.000 0.00 0.00 0.00 3.82
246 247 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
247 248 1.136000 CACACACACACACACACACAG 60.136 52.381 0.00 0.00 0.00 3.66
248 249 1.270571 ACACACACACACACACACAGA 60.271 47.619 0.00 0.00 0.00 3.41
249 250 1.394572 CACACACACACACACACAGAG 59.605 52.381 0.00 0.00 0.00 3.35
250 251 1.275010 ACACACACACACACACAGAGA 59.725 47.619 0.00 0.00 0.00 3.10
251 252 1.929169 CACACACACACACACAGAGAG 59.071 52.381 0.00 0.00 0.00 3.20
252 253 1.824852 ACACACACACACACAGAGAGA 59.175 47.619 0.00 0.00 0.00 3.10
253 254 2.196749 CACACACACACACAGAGAGAC 58.803 52.381 0.00 0.00 0.00 3.36
254 255 1.824852 ACACACACACACAGAGAGACA 59.175 47.619 0.00 0.00 0.00 3.41
255 256 2.159184 ACACACACACACAGAGAGACAG 60.159 50.000 0.00 0.00 0.00 3.51
256 257 2.099756 CACACACACACAGAGAGACAGA 59.900 50.000 0.00 0.00 0.00 3.41
257 258 2.360483 ACACACACACAGAGAGACAGAG 59.640 50.000 0.00 0.00 0.00 3.35
258 259 2.620585 CACACACACAGAGAGACAGAGA 59.379 50.000 0.00 0.00 0.00 3.10
259 260 2.884012 ACACACACAGAGAGACAGAGAG 59.116 50.000 0.00 0.00 0.00 3.20
260 261 3.145286 CACACACAGAGAGACAGAGAGA 58.855 50.000 0.00 0.00 0.00 3.10
261 262 3.189080 CACACACAGAGAGACAGAGAGAG 59.811 52.174 0.00 0.00 0.00 3.20
262 263 3.072330 ACACACAGAGAGACAGAGAGAGA 59.928 47.826 0.00 0.00 0.00 3.10
263 264 3.686241 CACACAGAGAGACAGAGAGAGAG 59.314 52.174 0.00 0.00 0.00 3.20
264 265 3.582647 ACACAGAGAGACAGAGAGAGAGA 59.417 47.826 0.00 0.00 0.00 3.10
265 266 4.186926 CACAGAGAGACAGAGAGAGAGAG 58.813 52.174 0.00 0.00 0.00 3.20
266 267 3.198635 ACAGAGAGACAGAGAGAGAGAGG 59.801 52.174 0.00 0.00 0.00 3.69
267 268 2.171448 AGAGAGACAGAGAGAGAGAGGC 59.829 54.545 0.00 0.00 0.00 4.70
268 269 1.212935 AGAGACAGAGAGAGAGAGGCC 59.787 57.143 0.00 0.00 0.00 5.19
269 270 1.212935 GAGACAGAGAGAGAGAGGCCT 59.787 57.143 3.86 3.86 0.00 5.19
270 271 1.064463 AGACAGAGAGAGAGAGGCCTG 60.064 57.143 12.00 0.00 0.00 4.85
271 272 0.704076 ACAGAGAGAGAGAGGCCTGT 59.296 55.000 12.00 5.74 0.00 4.00
272 273 1.077005 ACAGAGAGAGAGAGGCCTGTT 59.923 52.381 12.00 0.00 31.62 3.16
273 274 1.477700 CAGAGAGAGAGAGGCCTGTTG 59.522 57.143 12.00 0.00 0.00 3.33
274 275 1.077005 AGAGAGAGAGAGGCCTGTTGT 59.923 52.381 12.00 0.00 0.00 3.32
275 276 1.899142 GAGAGAGAGAGGCCTGTTGTT 59.101 52.381 12.00 0.00 0.00 2.83
276 277 1.899142 AGAGAGAGAGGCCTGTTGTTC 59.101 52.381 12.00 5.90 0.00 3.18
277 278 0.605589 AGAGAGAGGCCTGTTGTTCG 59.394 55.000 12.00 0.00 0.00 3.95
294 295 2.482333 CGTACGGCCTAGCTGAGCT 61.482 63.158 13.25 13.25 43.41 4.09
300 301 1.051812 GGCCTAGCTGAGCTATGGAA 58.948 55.000 24.56 4.26 40.54 3.53
423 424 3.511540 AGGACGTCAAGTTCATCAGATCA 59.488 43.478 18.91 0.00 0.00 2.92
433 434 4.395542 AGTTCATCAGATCAAAGCTCAAGC 59.604 41.667 0.00 0.00 42.49 4.01
434 435 3.946606 TCATCAGATCAAAGCTCAAGCA 58.053 40.909 4.59 0.00 45.16 3.91
450 451 0.107312 AGCATGTGCACTCCATCCTC 60.107 55.000 19.41 0.00 45.16 3.71
483 484 1.409241 GGGCAGGAGATTCTTGATGCA 60.409 52.381 15.93 0.00 35.40 3.96
495 496 4.305539 TCTTGATGCAGAATCCAAGGAA 57.694 40.909 12.42 0.00 34.00 3.36
507 508 4.566426 ATCCAAGGAACTGAAGAAGGAG 57.434 45.455 0.00 0.00 40.86 3.69
528 529 1.663074 GCTGGATCTCGCCGATGAC 60.663 63.158 0.00 0.00 30.84 3.06
533 534 0.319383 GATCTCGCCGATGACATGCT 60.319 55.000 0.00 0.00 30.84 3.79
554 555 1.067213 TGATGCCATCGACGACTTCAA 60.067 47.619 0.00 0.00 0.00 2.69
562 563 1.679680 TCGACGACTTCAACCTCACTT 59.320 47.619 0.00 0.00 0.00 3.16
602 603 1.580845 AAGCGCTTGATGGTGCAGAC 61.581 55.000 24.40 0.00 44.17 3.51
645 652 2.490903 CCAAGATTTCAGGGCAAGAGTG 59.509 50.000 0.00 0.00 0.00 3.51
714 745 4.340381 CCCATCTCCAGCTTATTTTCAAGG 59.660 45.833 0.00 0.00 0.00 3.61
836 892 5.777223 TCATCACATACCTGATAGGAGAAGG 59.223 44.000 1.13 0.00 37.67 3.46
837 893 5.403558 TCACATACCTGATAGGAGAAGGA 57.596 43.478 1.13 0.00 37.67 3.36
838 894 5.389520 TCACATACCTGATAGGAGAAGGAG 58.610 45.833 1.13 0.00 37.67 3.69
839 895 4.526262 CACATACCTGATAGGAGAAGGAGG 59.474 50.000 1.13 0.00 37.67 4.30
840 896 4.420552 ACATACCTGATAGGAGAAGGAGGA 59.579 45.833 1.13 0.00 37.67 3.71
841 897 3.611025 ACCTGATAGGAGAAGGAGGAG 57.389 52.381 1.13 0.00 37.67 3.69
844 900 4.151883 CCTGATAGGAGAAGGAGGAGAAG 58.848 52.174 0.00 0.00 37.67 2.85
859 942 2.027653 GGAGAAGAAGAAGGGACCACAG 60.028 54.545 0.00 0.00 0.00 3.66
913 999 2.440599 GAATGGCTGGTGTGGGGT 59.559 61.111 0.00 0.00 0.00 4.95
1007 1105 1.075374 TCCAACTCCCAACATGAAGGG 59.925 52.381 17.67 17.67 46.90 3.95
1067 1165 0.896940 CCTGCTGACACCCAAGCAAT 60.897 55.000 0.00 0.00 36.81 3.56
1132 1230 6.701400 AGATGACAAAAGGTGTGCAAATTTAC 59.299 34.615 0.00 0.00 41.96 2.01
1240 2642 6.001449 TGGTCAAGCTGCCTACTAATTAAT 57.999 37.500 0.00 0.00 0.00 1.40
1346 2759 5.123979 AGTCTTTCCCACAAAATAATCTCGC 59.876 40.000 0.00 0.00 0.00 5.03
1365 2778 3.056179 TCGCCAGTAGAATTGTCATCACA 60.056 43.478 0.00 0.00 0.00 3.58
1366 2779 3.684305 CGCCAGTAGAATTGTCATCACAA 59.316 43.478 0.00 0.00 46.71 3.33
1367 2780 4.436050 CGCCAGTAGAATTGTCATCACAAC 60.436 45.833 0.00 0.00 45.47 3.32
1371 2784 6.596888 CCAGTAGAATTGTCATCACAACTCAT 59.403 38.462 0.00 0.00 45.47 2.90
1377 2790 8.781196 AGAATTGTCATCACAACTCATATATGC 58.219 33.333 7.92 0.00 45.47 3.14
1378 2791 8.454570 AATTGTCATCACAACTCATATATGCA 57.545 30.769 7.92 0.00 45.47 3.96
1379 2792 8.631480 ATTGTCATCACAACTCATATATGCAT 57.369 30.769 3.79 3.79 45.47 3.96
1380 2793 7.662604 TGTCATCACAACTCATATATGCATC 57.337 36.000 0.19 0.00 0.00 3.91
1381 2794 6.366877 TGTCATCACAACTCATATATGCATCG 59.633 38.462 0.19 0.00 0.00 3.84
1382 2795 6.367149 GTCATCACAACTCATATATGCATCGT 59.633 38.462 0.19 0.00 0.00 3.73
1383 2796 6.587608 TCATCACAACTCATATATGCATCGTC 59.412 38.462 0.19 0.00 0.00 4.20
1384 2797 5.841810 TCACAACTCATATATGCATCGTCA 58.158 37.500 0.19 0.00 0.00 4.35
1386 2799 6.421801 TCACAACTCATATATGCATCGTCAAG 59.578 38.462 0.19 0.00 0.00 3.02
1387 2800 6.421801 CACAACTCATATATGCATCGTCAAGA 59.578 38.462 0.19 0.00 0.00 3.02
1388 2801 7.117379 CACAACTCATATATGCATCGTCAAGAT 59.883 37.037 0.19 0.00 41.01 2.40
1396 2872 3.376218 ATCGTCAAGATGCAGAGGC 57.624 52.632 0.00 0.00 38.36 4.70
1397 2873 0.179062 ATCGTCAAGATGCAGAGGCC 60.179 55.000 0.00 0.00 38.36 5.19
1401 2877 0.179065 TCAAGATGCAGAGGCCGATG 60.179 55.000 0.00 0.55 40.13 3.84
1402 2878 1.147824 AAGATGCAGAGGCCGATGG 59.852 57.895 11.60 0.00 40.13 3.51
1408 2884 1.230324 GCAGAGGCCGATGGTTTATC 58.770 55.000 11.60 0.00 0.00 1.75
1411 2887 3.545703 CAGAGGCCGATGGTTTATCTTT 58.454 45.455 0.00 0.00 33.44 2.52
1412 2888 3.561725 CAGAGGCCGATGGTTTATCTTTC 59.438 47.826 0.00 0.00 33.44 2.62
1413 2889 3.456277 AGAGGCCGATGGTTTATCTTTCT 59.544 43.478 0.00 0.00 33.44 2.52
1417 2893 5.130477 AGGCCGATGGTTTATCTTTCTCTTA 59.870 40.000 0.00 0.00 33.44 2.10
1418 2894 5.820947 GGCCGATGGTTTATCTTTCTCTTAA 59.179 40.000 0.00 0.00 33.44 1.85
1419 2895 6.317893 GGCCGATGGTTTATCTTTCTCTTAAA 59.682 38.462 0.00 0.00 33.44 1.52
1453 2992 4.215908 TCGTATTGCTTCTCTACCAGGAT 58.784 43.478 0.00 0.00 0.00 3.24
1510 3145 2.642171 TCCTATATGGGCTCCCGAAT 57.358 50.000 0.00 0.00 39.42 3.34
1511 3146 2.915869 TCCTATATGGGCTCCCGAATT 58.084 47.619 0.00 0.00 39.42 2.17
1534 3190 4.893524 TGAAAAGATGGCTCTACGGATCTA 59.106 41.667 0.00 0.00 0.00 1.98
1535 3191 5.010112 TGAAAAGATGGCTCTACGGATCTAG 59.990 44.000 0.00 0.00 0.00 2.43
1541 3200 1.609555 GCTCTACGGATCTAGTGTGGG 59.390 57.143 4.95 0.48 0.00 4.61
1543 3202 3.552875 CTCTACGGATCTAGTGTGGGAA 58.447 50.000 4.95 0.00 0.00 3.97
1550 3209 4.514401 GGATCTAGTGTGGGAAATTTCGT 58.486 43.478 11.95 0.00 0.00 3.85
1572 3231 2.189594 CTTGGATGAAGCCTGACACA 57.810 50.000 0.00 0.00 0.00 3.72
1584 3243 0.947244 CTGACACAGTTGGACAAGGC 59.053 55.000 0.00 0.00 0.00 4.35
1588 3247 3.211045 GACACAGTTGGACAAGGCTTTA 58.789 45.455 0.00 0.00 0.00 1.85
1609 3268 4.908601 AACTGTGACCATCCTATTGTGA 57.091 40.909 0.00 0.00 0.00 3.58
1626 3285 0.106769 TGAGCATGTGTGGTGGTGTT 60.107 50.000 0.00 0.00 35.91 3.32
1661 3320 3.472283 TTGCATGTTTTCAGCAATGGT 57.528 38.095 0.00 0.00 38.22 3.55
1683 3342 0.904865 TGGTCCTCCGAGAGCAACAT 60.905 55.000 0.00 0.00 41.08 2.71
1777 3436 2.930826 TCAGAACACTCCAGGGTTTC 57.069 50.000 0.00 0.00 0.00 2.78
1805 3464 1.946768 GGTACACAGTTTGCAGCTTGA 59.053 47.619 0.00 0.00 0.00 3.02
1839 3498 5.248248 TCTTCCTCACCATATGTTGAAGACA 59.752 40.000 4.38 0.00 39.21 3.41
1886 3545 3.756434 CCTGAGAATTACCCTTTTCGCAA 59.244 43.478 0.00 0.00 32.50 4.85
1968 3627 8.672815 GCAGAAGAATATTTTGAAGAGCTTAGT 58.327 33.333 0.00 0.00 0.00 2.24
1981 3643 6.665680 TGAAGAGCTTAGTGAGAGAGGTTTAT 59.334 38.462 0.00 0.00 0.00 1.40
2044 3723 5.435557 CGATGATGCGAAATTTCCTTAGAC 58.564 41.667 12.54 1.19 0.00 2.59
2093 3772 4.245660 ACTTACAGTTCCGACATCACATG 58.754 43.478 0.00 0.00 0.00 3.21
2191 3876 2.305009 CCTTCTCTGGATTGGATTGGC 58.695 52.381 0.00 0.00 0.00 4.52
2235 3923 8.774586 GTTGTTTTTAAAGATGCTGAGAGACTA 58.225 33.333 0.00 0.00 0.00 2.59
2239 3927 2.836636 AGATGCTGAGAGACTACCCA 57.163 50.000 0.00 0.00 0.00 4.51
2277 3965 1.728971 GTGCGAGTGTTGGATCTTCAG 59.271 52.381 0.00 0.00 0.00 3.02
2281 3969 3.364366 GCGAGTGTTGGATCTTCAGTTTG 60.364 47.826 0.00 0.00 0.00 2.93
2288 4069 5.068987 TGTTGGATCTTCAGTTTGAAAAGGG 59.931 40.000 0.00 0.00 35.73 3.95
2316 4097 6.420638 TGGGAATCATCATGTGATGGATATC 58.579 40.000 19.69 13.22 46.80 1.63
2328 4112 3.713248 TGATGGATATCTGTGGACTGCTT 59.287 43.478 2.05 0.00 34.31 3.91
2406 4190 0.955178 TAGCGAGGCTGCACTATCTC 59.045 55.000 0.50 0.00 40.10 2.75
2450 4234 0.882474 CGGATTAGAGAGCTACCCCG 59.118 60.000 0.00 0.00 36.30 5.73
2469 4253 3.201290 CCGTGAGATTGGGAGATTGAAG 58.799 50.000 0.00 0.00 0.00 3.02
2502 4286 8.888579 AGAATCTATATGTGAGTTTTAACCGG 57.111 34.615 0.00 0.00 0.00 5.28
2529 4313 0.179089 CGGAGTTGCCCAGAGAGATG 60.179 60.000 0.00 0.00 0.00 2.90
2552 4336 5.226194 GGAGACCTGCATCATTTAGAGAT 57.774 43.478 0.00 0.00 0.00 2.75
2562 4346 7.590279 TGCATCATTTAGAGATATTGTGCATG 58.410 34.615 0.00 0.00 0.00 4.06
2563 4347 7.446013 TGCATCATTTAGAGATATTGTGCATGA 59.554 33.333 0.00 0.00 0.00 3.07
2564 4348 7.963465 GCATCATTTAGAGATATTGTGCATGAG 59.037 37.037 0.00 0.00 0.00 2.90
2567 4351 7.443272 TCATTTAGAGATATTGTGCATGAGTGG 59.557 37.037 0.00 0.00 0.00 4.00
2579 4363 4.272018 GTGCATGAGTGGAACAGATATCAC 59.728 45.833 5.32 0.00 41.80 3.06
2589 4373 2.396608 ACAGATATCACAGAGCTGCCT 58.603 47.619 5.32 0.00 0.00 4.75
2595 4379 0.685785 TCACAGAGCTGCCTAGGGAG 60.686 60.000 25.20 25.20 36.62 4.30
2596 4380 0.685785 CACAGAGCTGCCTAGGGAGA 60.686 60.000 32.59 0.00 35.50 3.71
2597 4381 0.264359 ACAGAGCTGCCTAGGGAGAT 59.736 55.000 32.59 27.81 35.50 2.75
2601 4385 1.550072 GAGCTGCCTAGGGAGATCATC 59.450 57.143 35.39 21.48 45.91 2.92
2605 4389 1.261238 GCCTAGGGAGATCATCGGGG 61.261 65.000 11.72 0.00 0.00 5.73
2608 4392 1.007721 CTAGGGAGATCATCGGGGGAT 59.992 57.143 0.00 0.00 0.00 3.85
2610 4394 0.326264 GGGAGATCATCGGGGGATTG 59.674 60.000 0.00 0.00 0.00 2.67
2654 4438 2.079925 GAGCTACAACAAAGGGCTGAG 58.920 52.381 0.00 0.00 33.13 3.35
2709 4776 2.428544 TAGAGACTCTGGACCTCAGC 57.571 55.000 15.55 0.00 43.06 4.26
2748 4815 0.185416 ATCTACCACGGGAGATCGGT 59.815 55.000 4.85 0.00 35.35 4.69
2788 4855 1.491563 CTGAAGGCGCGTTGTACAC 59.508 57.895 21.52 5.79 0.00 2.90
2850 4917 5.913137 ACTTAGAGACTCTTGACCTGATG 57.087 43.478 10.96 0.00 0.00 3.07
2923 5285 1.412710 TGGAACGACTGCTCTTGAGTT 59.587 47.619 0.00 0.00 0.00 3.01
2930 5292 3.249917 GACTGCTCTTGAGTTCTACAGC 58.750 50.000 0.00 0.00 0.00 4.40
2985 5350 6.581171 CTTAAGAAGCTGGAGTTTTTGGAT 57.419 37.500 0.00 0.00 0.00 3.41
2996 5361 8.907885 GCTGGAGTTTTTGGATTTAGAAGATAT 58.092 33.333 0.00 0.00 0.00 1.63
3004 5369 8.561738 TTTGGATTTAGAAGATATATTCGGCC 57.438 34.615 4.50 0.00 34.27 6.13
3005 5370 6.338146 TGGATTTAGAAGATATATTCGGCCG 58.662 40.000 22.12 22.12 34.27 6.13
3006 5371 6.070995 TGGATTTAGAAGATATATTCGGCCGT 60.071 38.462 27.15 9.68 34.27 5.68
3007 5372 6.255887 GGATTTAGAAGATATATTCGGCCGTG 59.744 42.308 27.15 0.00 34.27 4.94
3008 5373 2.960819 AGAAGATATATTCGGCCGTGC 58.039 47.619 27.15 0.55 34.27 5.34
3009 5374 2.299013 AGAAGATATATTCGGCCGTGCA 59.701 45.455 27.15 11.18 34.27 4.57
3010 5375 2.080286 AGATATATTCGGCCGTGCAC 57.920 50.000 27.15 6.82 0.00 4.57
3107 5475 5.641209 AGAATAGTGATCTTGTGTCTTGTGC 59.359 40.000 0.00 0.00 0.00 4.57
3116 5484 0.941542 GTGTCTTGTGCGTTAGCCAA 59.058 50.000 0.00 0.00 44.33 4.52
3192 5597 3.529504 GCACAAAGCACATGCACG 58.470 55.556 6.64 0.00 45.16 5.34
3223 5628 4.332819 GTGGATCAAGGATTACTTCAACGG 59.667 45.833 0.00 0.00 37.29 4.44
3249 5654 2.093764 GGCTCCTTGGATATCAGGATCG 60.094 54.545 11.25 3.91 0.00 3.69
3335 5743 1.318158 TAAGGCTCGAAGTCGTCCCC 61.318 60.000 0.00 0.52 40.80 4.81
3351 5759 2.739784 CCAGAGAGCCCATAGCCG 59.260 66.667 0.00 0.00 45.47 5.52
3378 5786 0.772124 TGAAGGGTTCCCAAGGCTCT 60.772 55.000 10.73 0.00 0.00 4.09
3458 5866 1.404181 CCGATGCTGGAAGTTCTCGAA 60.404 52.381 11.73 0.00 34.67 3.71
3505 5913 1.425066 ACCTCCACCTGCAAATGAAGA 59.575 47.619 0.00 0.00 0.00 2.87
3506 5914 1.815003 CCTCCACCTGCAAATGAAGAC 59.185 52.381 0.00 0.00 0.00 3.01
3507 5915 2.553904 CCTCCACCTGCAAATGAAGACT 60.554 50.000 0.00 0.00 0.00 3.24
3573 5981 2.094417 GTCGAGTTTAGATGCAACCAGC 59.906 50.000 0.00 0.00 45.96 4.85
3679 6114 1.855213 TTTCATGTCACTGGCTGCGC 61.855 55.000 0.00 0.00 0.00 6.09
3683 6118 3.558411 GTCACTGGCTGCGCGATC 61.558 66.667 12.10 0.00 0.00 3.69
3731 6178 2.747855 CGGGAGGTTTCCAGCAGC 60.748 66.667 0.00 0.00 45.98 5.25
3732 6179 2.436109 GGGAGGTTTCCAGCAGCA 59.564 61.111 0.00 0.00 45.98 4.41
3733 6180 1.676967 GGGAGGTTTCCAGCAGCAG 60.677 63.158 0.00 0.00 45.98 4.24
3734 6181 2.338785 GGAGGTTTCCAGCAGCAGC 61.339 63.158 0.00 0.00 43.45 5.25
3735 6182 1.601759 GAGGTTTCCAGCAGCAGCA 60.602 57.895 3.17 0.00 45.49 4.41
3736 6183 1.584380 GAGGTTTCCAGCAGCAGCAG 61.584 60.000 3.17 0.00 45.49 4.24
3737 6184 1.900498 GGTTTCCAGCAGCAGCAGT 60.900 57.895 3.17 0.00 45.49 4.40
3738 6185 1.578423 GTTTCCAGCAGCAGCAGTC 59.422 57.895 3.17 0.00 45.49 3.51
3753 6200 4.057428 GTCGGACTGGCGCTGAGT 62.057 66.667 7.64 10.10 0.00 3.41
3754 6201 3.749064 TCGGACTGGCGCTGAGTC 61.749 66.667 23.76 23.76 39.38 3.36
3756 6203 2.659610 GGACTGGCGCTGAGTCTT 59.340 61.111 27.76 4.70 39.91 3.01
3757 6204 1.004440 GGACTGGCGCTGAGTCTTT 60.004 57.895 27.76 4.40 39.91 2.52
3758 6205 0.603975 GGACTGGCGCTGAGTCTTTT 60.604 55.000 27.76 4.10 39.91 2.27
3759 6206 0.793250 GACTGGCGCTGAGTCTTTTC 59.207 55.000 24.23 6.48 37.46 2.29
3760 6207 0.603975 ACTGGCGCTGAGTCTTTTCC 60.604 55.000 7.64 0.00 0.00 3.13
3770 6229 4.826556 CTGAGTCTTTTCCGGAGAAGAAT 58.173 43.478 32.40 31.55 32.35 2.40
3773 6232 5.480772 TGAGTCTTTTCCGGAGAAGAATAGT 59.519 40.000 32.40 19.90 32.35 2.12
3788 6250 3.327757 AGAATAGTGCACAGGAGGTTTCA 59.672 43.478 21.04 0.00 0.00 2.69
3797 6262 0.475906 AGGAGGTTTCAAGCAGCAGT 59.524 50.000 0.00 0.00 0.00 4.40
3876 6356 1.666888 GCAGCGTGATTGGGTTTCTTG 60.667 52.381 0.00 0.00 0.00 3.02
3883 6363 3.068024 GTGATTGGGTTTCTTGCTTGACA 59.932 43.478 0.00 0.00 0.00 3.58
3895 6375 3.641437 TGCTTGACAAGGCAAATGTAC 57.359 42.857 16.80 0.00 35.40 2.90
3904 6396 0.165079 GGCAAATGTACACACGACCG 59.835 55.000 0.00 0.00 0.00 4.79
3906 6398 1.126113 GCAAATGTACACACGACCGAG 59.874 52.381 0.00 0.00 0.00 4.63
3915 6407 1.226323 CACGACCGAGCGAGGTAAG 60.226 63.158 6.13 6.59 46.09 2.34
3934 6454 0.997196 GCCGTCCACTCGTAATCAAC 59.003 55.000 0.00 0.00 0.00 3.18
3936 6456 1.203994 CCGTCCACTCGTAATCAACCT 59.796 52.381 0.00 0.00 0.00 3.50
3938 6458 2.352421 CGTCCACTCGTAATCAACCTGT 60.352 50.000 0.00 0.00 0.00 4.00
3939 6459 3.660865 GTCCACTCGTAATCAACCTGTT 58.339 45.455 0.00 0.00 0.00 3.16
3941 6461 4.151867 GTCCACTCGTAATCAACCTGTTTC 59.848 45.833 0.00 0.00 0.00 2.78
3946 6466 6.202954 CACTCGTAATCAACCTGTTTCTTTCT 59.797 38.462 0.00 0.00 0.00 2.52
3948 6468 7.282450 ACTCGTAATCAACCTGTTTCTTTCTTT 59.718 33.333 0.00 0.00 0.00 2.52
3956 6476 8.585018 TCAACCTGTTTCTTTCTTTCTTCTTTT 58.415 29.630 0.00 0.00 0.00 2.27
3985 6518 3.250040 CACTAACACACTTGCTTGTACCC 59.750 47.826 0.00 0.00 0.00 3.69
3997 6530 0.752054 TTGTACCCACCGTCGTCTTT 59.248 50.000 0.00 0.00 0.00 2.52
4013 6550 8.332464 CCGTCGTCTTTATTTGCAGATTAATTA 58.668 33.333 0.00 0.00 0.00 1.40
4014 6551 9.697250 CGTCGTCTTTATTTGCAGATTAATTAA 57.303 29.630 0.00 0.00 0.00 1.40
4058 6595 8.837788 TCATCGCAATCATCTTCAACTATATT 57.162 30.769 0.00 0.00 0.00 1.28
4059 6596 8.929746 TCATCGCAATCATCTTCAACTATATTC 58.070 33.333 0.00 0.00 0.00 1.75
4061 6598 8.302965 TCGCAATCATCTTCAACTATATTCAG 57.697 34.615 0.00 0.00 0.00 3.02
4062 6599 7.928167 TCGCAATCATCTTCAACTATATTCAGT 59.072 33.333 0.00 0.00 0.00 3.41
4063 6600 9.196552 CGCAATCATCTTCAACTATATTCAGTA 57.803 33.333 0.00 0.00 0.00 2.74
4074 8047 6.980416 ACTATATTCAGTAACTGTCCCTCC 57.020 41.667 0.00 0.00 32.61 4.30
4168 8142 1.593265 CAGGGCCTGGATTGCAAAC 59.407 57.895 26.34 0.00 0.00 2.93
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 0.461516 AGTGCATCATCACTCCGCAG 60.462 55.000 0.00 0.00 43.28 5.18
1 2 1.598517 AGTGCATCATCACTCCGCA 59.401 52.632 0.00 0.00 43.28 5.69
2 3 4.528674 AGTGCATCATCACTCCGC 57.471 55.556 0.00 0.00 43.28 5.54
27 28 2.966309 CTTCGTTTGAGGCGGGCAC 61.966 63.158 3.78 0.00 0.00 5.01
28 29 2.668212 CTTCGTTTGAGGCGGGCA 60.668 61.111 3.78 0.00 0.00 5.36
29 30 4.103103 GCTTCGTTTGAGGCGGGC 62.103 66.667 0.00 0.00 37.47 6.13
33 34 0.040958 CACACAGCTTCGTTTGAGGC 60.041 55.000 0.00 0.00 46.85 4.70
34 35 0.040958 GCACACAGCTTCGTTTGAGG 60.041 55.000 0.00 0.00 41.15 3.86
35 36 3.444657 GCACACAGCTTCGTTTGAG 57.555 52.632 0.00 0.00 41.15 3.02
59 60 1.127582 GTTCTTCTCGAGTGCATGTGC 59.872 52.381 13.13 0.00 42.50 4.57
60 61 2.407090 TGTTCTTCTCGAGTGCATGTG 58.593 47.619 13.13 0.00 0.00 3.21
61 62 2.297315 TCTGTTCTTCTCGAGTGCATGT 59.703 45.455 13.13 0.00 0.00 3.21
62 63 2.951726 TCTGTTCTTCTCGAGTGCATG 58.048 47.619 13.13 0.00 0.00 4.06
63 64 3.667497 TTCTGTTCTTCTCGAGTGCAT 57.333 42.857 13.13 0.00 0.00 3.96
64 65 3.320626 CATTCTGTTCTTCTCGAGTGCA 58.679 45.455 13.13 4.88 0.00 4.57
65 66 2.670414 CCATTCTGTTCTTCTCGAGTGC 59.330 50.000 13.13 0.35 0.00 4.40
66 67 2.670414 GCCATTCTGTTCTTCTCGAGTG 59.330 50.000 13.13 7.07 0.00 3.51
67 68 2.354203 GGCCATTCTGTTCTTCTCGAGT 60.354 50.000 13.13 0.00 0.00 4.18
68 69 2.275318 GGCCATTCTGTTCTTCTCGAG 58.725 52.381 5.93 5.93 0.00 4.04
69 70 1.066143 GGGCCATTCTGTTCTTCTCGA 60.066 52.381 4.39 0.00 0.00 4.04
70 71 1.373570 GGGCCATTCTGTTCTTCTCG 58.626 55.000 4.39 0.00 0.00 4.04
71 72 1.004745 TGGGGCCATTCTGTTCTTCTC 59.995 52.381 4.39 0.00 0.00 2.87
72 73 1.075601 TGGGGCCATTCTGTTCTTCT 58.924 50.000 4.39 0.00 0.00 2.85
73 74 2.027385 GATGGGGCCATTCTGTTCTTC 58.973 52.381 4.39 0.00 36.70 2.87
74 75 1.358787 TGATGGGGCCATTCTGTTCTT 59.641 47.619 4.39 0.00 36.70 2.52
75 76 1.002069 TGATGGGGCCATTCTGTTCT 58.998 50.000 4.39 0.00 36.70 3.01
76 77 1.959282 GATGATGGGGCCATTCTGTTC 59.041 52.381 4.39 0.00 36.70 3.18
77 78 1.412074 GGATGATGGGGCCATTCTGTT 60.412 52.381 4.39 0.00 36.70 3.16
78 79 0.186873 GGATGATGGGGCCATTCTGT 59.813 55.000 4.39 0.00 36.70 3.41
79 80 0.541296 GGGATGATGGGGCCATTCTG 60.541 60.000 4.39 0.00 36.70 3.02
80 81 1.000590 TGGGATGATGGGGCCATTCT 61.001 55.000 4.39 0.00 36.70 2.40
81 82 0.115745 ATGGGATGATGGGGCCATTC 59.884 55.000 4.39 1.30 36.70 2.67
82 83 0.178915 CATGGGATGATGGGGCCATT 60.179 55.000 4.39 0.00 36.70 3.16
83 84 1.467886 CATGGGATGATGGGGCCAT 59.532 57.895 4.39 0.00 39.69 4.40
84 85 2.936828 CATGGGATGATGGGGCCA 59.063 61.111 4.39 0.00 0.00 5.36
85 86 2.602568 GCATGGGATGATGGGGCC 60.603 66.667 0.00 0.00 0.00 5.80
86 87 2.199257 TGCATGGGATGATGGGGC 59.801 61.111 0.00 0.00 0.00 5.80
87 88 0.178944 ATGTGCATGGGATGATGGGG 60.179 55.000 0.00 0.00 0.00 4.96
88 89 1.712056 AATGTGCATGGGATGATGGG 58.288 50.000 0.00 0.00 0.00 4.00
89 90 6.785337 ATAATAATGTGCATGGGATGATGG 57.215 37.500 0.00 0.00 0.00 3.51
90 91 8.963725 ACTTATAATAATGTGCATGGGATGATG 58.036 33.333 0.00 0.00 0.00 3.07
94 95 9.979897 ACATACTTATAATAATGTGCATGGGAT 57.020 29.630 10.48 0.00 31.56 3.85
127 128 8.671028 GGTGCGAGGAATCTTTTATTTAACTTA 58.329 33.333 0.00 0.00 0.00 2.24
128 129 7.175990 TGGTGCGAGGAATCTTTTATTTAACTT 59.824 33.333 0.00 0.00 0.00 2.66
129 130 6.657541 TGGTGCGAGGAATCTTTTATTTAACT 59.342 34.615 0.00 0.00 0.00 2.24
130 131 6.745907 GTGGTGCGAGGAATCTTTTATTTAAC 59.254 38.462 0.00 0.00 0.00 2.01
131 132 6.431543 TGTGGTGCGAGGAATCTTTTATTTAA 59.568 34.615 0.00 0.00 0.00 1.52
132 133 5.941058 TGTGGTGCGAGGAATCTTTTATTTA 59.059 36.000 0.00 0.00 0.00 1.40
133 134 4.764823 TGTGGTGCGAGGAATCTTTTATTT 59.235 37.500 0.00 0.00 0.00 1.40
134 135 4.331968 TGTGGTGCGAGGAATCTTTTATT 58.668 39.130 0.00 0.00 0.00 1.40
135 136 3.941483 CTGTGGTGCGAGGAATCTTTTAT 59.059 43.478 0.00 0.00 0.00 1.40
136 137 3.334691 CTGTGGTGCGAGGAATCTTTTA 58.665 45.455 0.00 0.00 0.00 1.52
137 138 2.154462 CTGTGGTGCGAGGAATCTTTT 58.846 47.619 0.00 0.00 0.00 2.27
138 139 1.813513 CTGTGGTGCGAGGAATCTTT 58.186 50.000 0.00 0.00 0.00 2.52
139 140 0.674895 GCTGTGGTGCGAGGAATCTT 60.675 55.000 0.00 0.00 0.00 2.40
140 141 1.078848 GCTGTGGTGCGAGGAATCT 60.079 57.895 0.00 0.00 0.00 2.40
141 142 3.490890 GCTGTGGTGCGAGGAATC 58.509 61.111 0.00 0.00 0.00 2.52
150 151 3.655810 GAGGAGAGCCGCTGTGGTG 62.656 68.421 9.31 0.00 41.21 4.17
151 152 3.386237 GAGGAGAGCCGCTGTGGT 61.386 66.667 9.31 0.00 41.21 4.16
152 153 3.073735 AGAGGAGAGCCGCTGTGG 61.074 66.667 0.00 2.05 43.22 4.17
153 154 2.493973 GAGAGGAGAGCCGCTGTG 59.506 66.667 0.00 0.00 45.01 3.66
154 155 2.757917 GGAGAGGAGAGCCGCTGT 60.758 66.667 0.00 0.00 45.01 4.40
155 156 2.757508 TGGAGAGGAGAGCCGCTG 60.758 66.667 0.00 0.00 45.01 5.18
157 158 2.757917 AGTGGAGAGGAGAGCCGC 60.758 66.667 0.00 0.00 39.96 6.53
158 159 0.754957 ATGAGTGGAGAGGAGAGCCG 60.755 60.000 0.00 0.00 39.96 5.52
159 160 1.039856 GATGAGTGGAGAGGAGAGCC 58.960 60.000 0.00 0.00 0.00 4.70
160 161 1.956477 GAGATGAGTGGAGAGGAGAGC 59.044 57.143 0.00 0.00 0.00 4.09
161 162 2.175499 AGGAGATGAGTGGAGAGGAGAG 59.825 54.545 0.00 0.00 0.00 3.20
162 163 2.091939 CAGGAGATGAGTGGAGAGGAGA 60.092 54.545 0.00 0.00 0.00 3.71
163 164 2.309613 CAGGAGATGAGTGGAGAGGAG 58.690 57.143 0.00 0.00 0.00 3.69
164 165 1.063341 CCAGGAGATGAGTGGAGAGGA 60.063 57.143 0.00 0.00 32.60 3.71
165 166 1.412079 CCAGGAGATGAGTGGAGAGG 58.588 60.000 0.00 0.00 32.60 3.69
166 167 0.752054 GCCAGGAGATGAGTGGAGAG 59.248 60.000 0.00 0.00 32.60 3.20
167 168 1.039785 CGCCAGGAGATGAGTGGAGA 61.040 60.000 0.00 0.00 33.29 3.71
168 169 1.326213 ACGCCAGGAGATGAGTGGAG 61.326 60.000 0.00 0.00 37.20 3.86
169 170 0.033503 TACGCCAGGAGATGAGTGGA 60.034 55.000 0.00 0.00 32.60 4.02
170 171 0.824109 TTACGCCAGGAGATGAGTGG 59.176 55.000 0.00 0.00 0.00 4.00
171 172 1.478510 ACTTACGCCAGGAGATGAGTG 59.521 52.381 0.00 0.00 0.00 3.51
172 173 1.853963 ACTTACGCCAGGAGATGAGT 58.146 50.000 0.00 0.00 0.00 3.41
173 174 2.969628 AACTTACGCCAGGAGATGAG 57.030 50.000 0.00 0.00 0.00 2.90
174 175 2.832129 AGAAACTTACGCCAGGAGATGA 59.168 45.455 0.00 0.00 0.00 2.92
175 176 3.190874 GAGAAACTTACGCCAGGAGATG 58.809 50.000 0.00 0.00 0.00 2.90
176 177 2.168728 GGAGAAACTTACGCCAGGAGAT 59.831 50.000 0.00 0.00 0.00 2.75
177 178 1.549170 GGAGAAACTTACGCCAGGAGA 59.451 52.381 0.00 0.00 0.00 3.71
178 179 1.275291 TGGAGAAACTTACGCCAGGAG 59.725 52.381 0.00 0.00 32.75 3.69
179 180 1.344065 TGGAGAAACTTACGCCAGGA 58.656 50.000 0.00 0.00 32.75 3.86
180 181 2.178912 TTGGAGAAACTTACGCCAGG 57.821 50.000 0.00 0.00 38.32 4.45
181 182 3.751175 TGAATTGGAGAAACTTACGCCAG 59.249 43.478 0.00 0.00 38.32 4.85
182 183 3.745799 TGAATTGGAGAAACTTACGCCA 58.254 40.909 0.00 0.00 35.61 5.69
183 184 4.759516 TTGAATTGGAGAAACTTACGCC 57.240 40.909 0.00 0.00 0.00 5.68
184 185 6.206498 ACTTTTGAATTGGAGAAACTTACGC 58.794 36.000 0.00 0.00 0.00 4.42
185 186 8.770828 TCTACTTTTGAATTGGAGAAACTTACG 58.229 33.333 0.00 0.00 0.00 3.18
188 189 8.507249 CGATCTACTTTTGAATTGGAGAAACTT 58.493 33.333 0.00 0.00 0.00 2.66
189 190 7.119846 CCGATCTACTTTTGAATTGGAGAAACT 59.880 37.037 0.00 0.00 0.00 2.66
190 191 7.244192 CCGATCTACTTTTGAATTGGAGAAAC 58.756 38.462 0.00 0.00 0.00 2.78
191 192 6.374333 CCCGATCTACTTTTGAATTGGAGAAA 59.626 38.462 0.00 0.00 0.00 2.52
192 193 5.880332 CCCGATCTACTTTTGAATTGGAGAA 59.120 40.000 0.00 0.00 0.00 2.87
193 194 5.428253 CCCGATCTACTTTTGAATTGGAGA 58.572 41.667 0.00 0.00 0.00 3.71
194 195 4.576463 CCCCGATCTACTTTTGAATTGGAG 59.424 45.833 0.00 0.00 0.00 3.86
195 196 4.226394 TCCCCGATCTACTTTTGAATTGGA 59.774 41.667 0.00 0.00 0.00 3.53
196 197 4.523083 TCCCCGATCTACTTTTGAATTGG 58.477 43.478 0.00 0.00 0.00 3.16
197 198 5.065218 CACTCCCCGATCTACTTTTGAATTG 59.935 44.000 0.00 0.00 0.00 2.32
198 199 5.186198 CACTCCCCGATCTACTTTTGAATT 58.814 41.667 0.00 0.00 0.00 2.17
199 200 4.770795 CACTCCCCGATCTACTTTTGAAT 58.229 43.478 0.00 0.00 0.00 2.57
200 201 3.618997 GCACTCCCCGATCTACTTTTGAA 60.619 47.826 0.00 0.00 0.00 2.69
201 202 2.093658 GCACTCCCCGATCTACTTTTGA 60.094 50.000 0.00 0.00 0.00 2.69
202 203 2.280628 GCACTCCCCGATCTACTTTTG 58.719 52.381 0.00 0.00 0.00 2.44
203 204 1.906574 TGCACTCCCCGATCTACTTTT 59.093 47.619 0.00 0.00 0.00 2.27
204 205 1.207329 GTGCACTCCCCGATCTACTTT 59.793 52.381 10.32 0.00 0.00 2.66
205 206 0.824759 GTGCACTCCCCGATCTACTT 59.175 55.000 10.32 0.00 0.00 2.24
206 207 0.033011 AGTGCACTCCCCGATCTACT 60.033 55.000 15.25 0.00 0.00 2.57
207 208 0.103208 CAGTGCACTCCCCGATCTAC 59.897 60.000 18.64 0.00 0.00 2.59
208 209 1.676678 GCAGTGCACTCCCCGATCTA 61.677 60.000 18.64 0.00 0.00 1.98
209 210 3.023949 GCAGTGCACTCCCCGATCT 62.024 63.158 18.64 0.00 0.00 2.75
210 211 2.512515 GCAGTGCACTCCCCGATC 60.513 66.667 18.64 0.00 0.00 3.69
211 212 3.321648 TGCAGTGCACTCCCCGAT 61.322 61.111 18.64 0.00 31.71 4.18
220 221 1.673665 TGTGTGTGTGTGCAGTGCA 60.674 52.632 15.37 15.37 35.60 4.57
221 222 1.226379 GTGTGTGTGTGTGCAGTGC 60.226 57.895 8.58 8.58 0.00 4.40
222 223 0.179192 GTGTGTGTGTGTGTGCAGTG 60.179 55.000 0.00 0.00 0.00 3.66
223 224 0.605050 TGTGTGTGTGTGTGTGCAGT 60.605 50.000 0.00 0.00 0.00 4.40
224 225 0.179192 GTGTGTGTGTGTGTGTGCAG 60.179 55.000 0.00 0.00 0.00 4.41
225 226 0.886490 TGTGTGTGTGTGTGTGTGCA 60.886 50.000 0.00 0.00 0.00 4.57
226 227 0.454285 GTGTGTGTGTGTGTGTGTGC 60.454 55.000 0.00 0.00 0.00 4.57
227 228 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
228 229 1.155889 CTGTGTGTGTGTGTGTGTGT 58.844 50.000 0.00 0.00 0.00 3.72
229 230 1.394572 CTCTGTGTGTGTGTGTGTGTG 59.605 52.381 0.00 0.00 0.00 3.82
230 231 1.275010 TCTCTGTGTGTGTGTGTGTGT 59.725 47.619 0.00 0.00 0.00 3.72
231 232 1.929169 CTCTCTGTGTGTGTGTGTGTG 59.071 52.381 0.00 0.00 0.00 3.82
232 233 1.824852 TCTCTCTGTGTGTGTGTGTGT 59.175 47.619 0.00 0.00 0.00 3.72
233 234 2.196749 GTCTCTCTGTGTGTGTGTGTG 58.803 52.381 0.00 0.00 0.00 3.82
234 235 1.824852 TGTCTCTCTGTGTGTGTGTGT 59.175 47.619 0.00 0.00 0.00 3.72
235 236 2.099756 TCTGTCTCTCTGTGTGTGTGTG 59.900 50.000 0.00 0.00 0.00 3.82
236 237 2.360483 CTCTGTCTCTCTGTGTGTGTGT 59.640 50.000 0.00 0.00 0.00 3.72
237 238 2.620585 TCTCTGTCTCTCTGTGTGTGTG 59.379 50.000 0.00 0.00 0.00 3.82
238 239 2.884012 CTCTCTGTCTCTCTGTGTGTGT 59.116 50.000 0.00 0.00 0.00 3.72
239 240 3.145286 TCTCTCTGTCTCTCTGTGTGTG 58.855 50.000 0.00 0.00 0.00 3.82
240 241 3.072330 TCTCTCTCTGTCTCTCTGTGTGT 59.928 47.826 0.00 0.00 0.00 3.72
241 242 3.673902 TCTCTCTCTGTCTCTCTGTGTG 58.326 50.000 0.00 0.00 0.00 3.82
242 243 3.582647 TCTCTCTCTCTGTCTCTCTGTGT 59.417 47.826 0.00 0.00 0.00 3.72
243 244 4.186926 CTCTCTCTCTCTGTCTCTCTGTG 58.813 52.174 0.00 0.00 0.00 3.66
244 245 3.198635 CCTCTCTCTCTCTGTCTCTCTGT 59.801 52.174 0.00 0.00 0.00 3.41
245 246 3.801698 CCTCTCTCTCTCTGTCTCTCTG 58.198 54.545 0.00 0.00 0.00 3.35
246 247 2.171448 GCCTCTCTCTCTCTGTCTCTCT 59.829 54.545 0.00 0.00 0.00 3.10
247 248 2.565841 GCCTCTCTCTCTCTGTCTCTC 58.434 57.143 0.00 0.00 0.00 3.20
248 249 1.212935 GGCCTCTCTCTCTCTGTCTCT 59.787 57.143 0.00 0.00 0.00 3.10
249 250 1.212935 AGGCCTCTCTCTCTCTGTCTC 59.787 57.143 0.00 0.00 0.00 3.36
250 251 1.064463 CAGGCCTCTCTCTCTCTGTCT 60.064 57.143 0.00 0.00 0.00 3.41
251 252 1.340991 ACAGGCCTCTCTCTCTCTGTC 60.341 57.143 0.00 0.00 30.74 3.51
252 253 0.704076 ACAGGCCTCTCTCTCTCTGT 59.296 55.000 0.00 0.00 0.00 3.41
253 254 1.477700 CAACAGGCCTCTCTCTCTCTG 59.522 57.143 0.00 0.00 0.00 3.35
254 255 1.077005 ACAACAGGCCTCTCTCTCTCT 59.923 52.381 0.00 0.00 0.00 3.10
255 256 1.555967 ACAACAGGCCTCTCTCTCTC 58.444 55.000 0.00 0.00 0.00 3.20
256 257 1.899142 GAACAACAGGCCTCTCTCTCT 59.101 52.381 0.00 0.00 0.00 3.10
257 258 1.403514 CGAACAACAGGCCTCTCTCTC 60.404 57.143 0.00 0.00 0.00 3.20
258 259 0.605589 CGAACAACAGGCCTCTCTCT 59.394 55.000 0.00 0.00 0.00 3.10
259 260 0.318762 ACGAACAACAGGCCTCTCTC 59.681 55.000 0.00 0.00 0.00 3.20
260 261 1.272769 GTACGAACAACAGGCCTCTCT 59.727 52.381 0.00 0.00 0.00 3.10
261 262 1.711206 GTACGAACAACAGGCCTCTC 58.289 55.000 0.00 0.00 0.00 3.20
262 263 0.038526 CGTACGAACAACAGGCCTCT 60.039 55.000 10.44 0.00 0.00 3.69
263 264 1.012486 CCGTACGAACAACAGGCCTC 61.012 60.000 18.76 0.00 0.00 4.70
264 265 1.005394 CCGTACGAACAACAGGCCT 60.005 57.895 18.76 0.00 0.00 5.19
265 266 2.674084 GCCGTACGAACAACAGGCC 61.674 63.158 18.76 0.00 38.72 5.19
266 267 2.674084 GGCCGTACGAACAACAGGC 61.674 63.158 18.76 8.62 43.47 4.85
267 268 0.244450 TAGGCCGTACGAACAACAGG 59.756 55.000 18.76 0.00 0.00 4.00
268 269 1.625616 CTAGGCCGTACGAACAACAG 58.374 55.000 18.76 0.00 0.00 3.16
269 270 0.388907 GCTAGGCCGTACGAACAACA 60.389 55.000 18.76 0.00 0.00 3.33
270 271 0.108945 AGCTAGGCCGTACGAACAAC 60.109 55.000 18.76 1.33 0.00 3.32
271 272 0.108992 CAGCTAGGCCGTACGAACAA 60.109 55.000 18.76 0.00 0.00 2.83
272 273 0.961857 TCAGCTAGGCCGTACGAACA 60.962 55.000 18.76 0.00 0.00 3.18
273 274 0.248539 CTCAGCTAGGCCGTACGAAC 60.249 60.000 18.76 9.01 0.00 3.95
274 275 2.001361 GCTCAGCTAGGCCGTACGAA 62.001 60.000 18.76 0.00 0.00 3.85
275 276 2.478890 GCTCAGCTAGGCCGTACGA 61.479 63.158 18.76 0.00 0.00 3.43
276 277 1.164662 TAGCTCAGCTAGGCCGTACG 61.165 60.000 8.69 8.69 40.44 3.67
277 278 1.068194 CATAGCTCAGCTAGGCCGTAC 60.068 57.143 13.02 0.00 44.66 3.67
294 295 0.032515 TCACGGGAGCTCCTTCCATA 60.033 55.000 31.36 10.46 39.09 2.74
300 301 3.386237 GCAGTCACGGGAGCTCCT 61.386 66.667 31.36 11.02 35.95 3.69
330 331 3.060000 GCTACAACGGGCCCCAAC 61.060 66.667 18.66 0.00 0.00 3.77
342 343 2.047274 GCACCCAGCTTCGCTACA 60.047 61.111 0.00 0.00 36.40 2.74
423 424 1.268899 GAGTGCACATGCTTGAGCTTT 59.731 47.619 21.04 10.00 39.81 3.51
433 434 1.664873 CAGAGGATGGAGTGCACATG 58.335 55.000 21.04 0.00 0.00 3.21
483 484 4.599241 TCCTTCTTCAGTTCCTTGGATTCT 59.401 41.667 0.00 0.00 0.00 2.40
495 496 1.294780 CAGCGCCTCCTTCTTCAGT 59.705 57.895 2.29 0.00 0.00 3.41
533 534 1.067213 TGAAGTCGTCGATGGCATCAA 60.067 47.619 25.88 6.09 0.00 2.57
568 569 4.112341 CTTGCTTCTGCGGCTGCC 62.112 66.667 16.57 9.11 43.34 4.85
602 603 0.533951 GGGGCTTGCTTTGATCTTGG 59.466 55.000 0.00 0.00 0.00 3.61
645 652 1.153628 CCGGACCGACACTTCATCC 60.154 63.158 17.49 0.00 0.00 3.51
714 745 3.028130 TCTGGGGTGGTTGTTTTTCTTC 58.972 45.455 0.00 0.00 0.00 2.87
836 892 2.235155 GTGGTCCCTTCTTCTTCTCCTC 59.765 54.545 0.00 0.00 0.00 3.71
837 893 2.261729 GTGGTCCCTTCTTCTTCTCCT 58.738 52.381 0.00 0.00 0.00 3.69
838 894 1.978580 TGTGGTCCCTTCTTCTTCTCC 59.021 52.381 0.00 0.00 0.00 3.71
839 895 2.614229 GCTGTGGTCCCTTCTTCTTCTC 60.614 54.545 0.00 0.00 0.00 2.87
840 896 1.349357 GCTGTGGTCCCTTCTTCTTCT 59.651 52.381 0.00 0.00 0.00 2.85
841 897 1.814793 GCTGTGGTCCCTTCTTCTTC 58.185 55.000 0.00 0.00 0.00 2.87
844 900 1.376037 CCGCTGTGGTCCCTTCTTC 60.376 63.158 0.00 0.00 0.00 2.87
913 999 0.187361 AGGCTGGCAAGGGTTGTTTA 59.813 50.000 3.38 0.00 0.00 2.01
1007 1105 2.783135 TGAGAATGCTTGTGAGAACCC 58.217 47.619 0.00 0.00 0.00 4.11
1067 1165 3.769844 GTGGATAAGACCTTCCTCTGTCA 59.230 47.826 0.00 0.00 33.89 3.58
1319 2732 7.232118 AGATTATTTTGTGGGAAAGACTTGG 57.768 36.000 0.00 0.00 0.00 3.61
1346 2759 5.934043 TGAGTTGTGATGACAATTCTACTGG 59.066 40.000 18.49 0.00 44.91 4.00
1365 2778 7.592439 CATCTTGACGATGCATATATGAGTT 57.408 36.000 17.10 0.00 42.75 3.01
1378 2791 0.179062 GGCCTCTGCATCTTGACGAT 60.179 55.000 0.00 0.00 40.13 3.73
1379 2792 1.219124 GGCCTCTGCATCTTGACGA 59.781 57.895 0.00 0.00 40.13 4.20
1380 2793 2.169789 CGGCCTCTGCATCTTGACG 61.170 63.158 0.00 0.00 40.13 4.35
1381 2794 0.179062 ATCGGCCTCTGCATCTTGAC 60.179 55.000 0.00 0.00 40.13 3.18
1382 2795 0.179065 CATCGGCCTCTGCATCTTGA 60.179 55.000 0.00 0.00 40.13 3.02
1383 2796 1.164662 CCATCGGCCTCTGCATCTTG 61.165 60.000 0.00 0.00 40.13 3.02
1384 2797 1.147824 CCATCGGCCTCTGCATCTT 59.852 57.895 0.00 0.00 40.13 2.40
1386 2799 0.749454 AAACCATCGGCCTCTGCATC 60.749 55.000 0.00 0.00 40.13 3.91
1387 2800 0.546122 TAAACCATCGGCCTCTGCAT 59.454 50.000 0.00 0.00 40.13 3.96
1388 2801 0.546122 ATAAACCATCGGCCTCTGCA 59.454 50.000 0.00 0.00 40.13 4.41
1389 2802 1.202698 AGATAAACCATCGGCCTCTGC 60.203 52.381 0.00 0.00 38.81 4.26
1392 2868 3.809905 AGAAAGATAAACCATCGGCCTC 58.190 45.455 0.00 0.00 38.81 4.70
1394 2870 3.809905 AGAGAAAGATAAACCATCGGCC 58.190 45.455 0.00 0.00 38.81 6.13
1425 2901 6.228258 TGGTAGAGAAGCAATACGAGTTTTT 58.772 36.000 0.00 0.00 31.13 1.94
1470 3009 5.889853 AGGATTCATTCTGATGCAAAGCTTA 59.110 36.000 0.00 0.00 33.14 3.09
1476 3015 6.888088 CCCATATAGGATTCATTCTGATGCAA 59.112 38.462 0.00 0.00 41.22 4.08
1502 3137 3.019564 AGCCATCTTTTCAATTCGGGAG 58.980 45.455 0.00 0.00 0.00 4.30
1510 3145 3.973206 TCCGTAGAGCCATCTTTTCAA 57.027 42.857 0.00 0.00 36.96 2.69
1511 3146 3.706594 AGATCCGTAGAGCCATCTTTTCA 59.293 43.478 0.00 0.00 36.96 2.69
1534 3190 2.306847 AGCAACGAAATTTCCCACACT 58.693 42.857 12.54 1.67 0.00 3.55
1535 3191 2.793278 AGCAACGAAATTTCCCACAC 57.207 45.000 12.54 0.00 0.00 3.82
1541 3200 5.752098 CTTCATCCAAGCAACGAAATTTC 57.248 39.130 8.20 8.20 0.00 2.17
1572 3231 3.632145 CACAGTTAAAGCCTTGTCCAACT 59.368 43.478 0.00 0.00 0.00 3.16
1584 3243 6.878923 TCACAATAGGATGGTCACAGTTAAAG 59.121 38.462 0.00 0.00 0.00 1.85
1588 3247 4.836825 CTCACAATAGGATGGTCACAGTT 58.163 43.478 0.00 0.00 0.00 3.16
1609 3268 0.823356 GGAACACCACCACACATGCT 60.823 55.000 0.00 0.00 0.00 3.79
1626 3285 2.823924 TGCAAAGTAGTGCTAACGGA 57.176 45.000 0.00 0.00 45.17 4.69
1661 3320 1.480954 GTTGCTCTCGGAGGACCATTA 59.519 52.381 4.96 0.00 35.59 1.90
1683 3342 6.436738 TTTACATGTACCCCTAGTTGTTCA 57.563 37.500 4.68 0.00 0.00 3.18
1777 3436 2.793237 GCAAACTGTGTACCAACGGTTG 60.793 50.000 13.86 13.86 46.52 3.77
1805 3464 3.248024 TGGTGAGGAAGATTGGTGTAGT 58.752 45.455 0.00 0.00 0.00 2.73
1839 3498 6.706270 GGTATACACTGCAGTATAACAAGCAT 59.294 38.462 21.20 4.07 41.89 3.79
1886 3545 3.317149 CCATCGCATGACCAAATCATTCT 59.683 43.478 0.00 0.00 46.54 2.40
1968 3627 4.194640 GCTGCATCAATAAACCTCTCTCA 58.805 43.478 0.00 0.00 0.00 3.27
1981 3643 4.885325 ACTGTCATGATTATGCTGCATCAA 59.115 37.500 19.90 11.94 33.13 2.57
2044 3723 9.740239 AATGAAATTATCTTCATGTGATTTCCG 57.260 29.630 8.69 0.00 43.65 4.30
2105 3784 5.105351 TCAATACATAGCCGATGGATTCGAT 60.105 40.000 4.06 0.00 44.64 3.59
2191 3876 4.753233 ACAACAAGAGATCGAATCTGAGG 58.247 43.478 4.44 1.56 40.38 3.86
2235 3923 3.255642 CACGTTCCAATTTCTCAATGGGT 59.744 43.478 0.00 0.00 35.14 4.51
2239 3927 3.609175 CGCACACGTTCCAATTTCTCAAT 60.609 43.478 0.00 0.00 33.53 2.57
2277 3965 4.343814 TGATTCCCAAGACCCTTTTCAAAC 59.656 41.667 0.00 0.00 0.00 2.93
2281 3969 4.344104 TGATGATTCCCAAGACCCTTTTC 58.656 43.478 0.00 0.00 0.00 2.29
2309 4090 2.101415 CGAAGCAGTCCACAGATATCCA 59.899 50.000 0.00 0.00 0.00 3.41
2316 4097 0.249447 TCACACGAAGCAGTCCACAG 60.249 55.000 0.00 0.00 0.00 3.66
2350 4134 6.547510 AGCTCACTAATTCCCAATCCATTTAC 59.452 38.462 0.00 0.00 0.00 2.01
2353 4137 5.134725 AGCTCACTAATTCCCAATCCATT 57.865 39.130 0.00 0.00 0.00 3.16
2358 4142 4.475016 AGTGGTAGCTCACTAATTCCCAAT 59.525 41.667 6.29 0.00 45.18 3.16
2359 4143 3.844211 AGTGGTAGCTCACTAATTCCCAA 59.156 43.478 6.29 0.00 45.18 4.12
2406 4190 0.247735 CGCTTACGTCCAGAGTCTCG 60.248 60.000 0.00 0.00 33.53 4.04
2431 4215 0.882474 CGGGGTAGCTCTCTAATCCG 59.118 60.000 0.00 0.00 36.78 4.18
2432 4216 1.614413 CACGGGGTAGCTCTCTAATCC 59.386 57.143 0.00 0.00 0.00 3.01
2433 4217 2.554893 CTCACGGGGTAGCTCTCTAATC 59.445 54.545 0.00 0.00 0.00 1.75
2439 4223 1.115467 CAATCTCACGGGGTAGCTCT 58.885 55.000 0.00 0.00 0.00 4.09
2440 4224 0.105039 CCAATCTCACGGGGTAGCTC 59.895 60.000 0.00 0.00 0.00 4.09
2450 4234 5.495640 ACTTCTTCAATCTCCCAATCTCAC 58.504 41.667 0.00 0.00 0.00 3.51
2487 4271 3.325425 TGATCCTCCGGTTAAAACTCACA 59.675 43.478 0.00 0.00 0.00 3.58
2494 4278 1.479323 CTCCGTGATCCTCCGGTTAAA 59.521 52.381 0.00 0.00 44.51 1.52
2495 4279 1.108776 CTCCGTGATCCTCCGGTTAA 58.891 55.000 0.00 0.00 44.51 2.01
2498 4282 1.305046 AACTCCGTGATCCTCCGGT 60.305 57.895 0.00 0.00 44.51 5.28
2501 4285 1.153349 GGCAACTCCGTGATCCTCC 60.153 63.158 0.00 0.00 0.00 4.30
2502 4286 1.153349 GGGCAACTCCGTGATCCTC 60.153 63.158 0.00 0.00 34.94 3.71
2529 4313 3.389329 TCTCTAAATGATGCAGGTCTCCC 59.611 47.826 0.00 0.00 0.00 4.30
2552 4336 4.284829 TCTGTTCCACTCATGCACAATA 57.715 40.909 0.00 0.00 0.00 1.90
2562 4346 4.099266 AGCTCTGTGATATCTGTTCCACTC 59.901 45.833 3.98 0.00 0.00 3.51
2563 4347 4.029520 AGCTCTGTGATATCTGTTCCACT 58.970 43.478 3.98 0.00 0.00 4.00
2564 4348 4.118410 CAGCTCTGTGATATCTGTTCCAC 58.882 47.826 3.98 0.00 0.00 4.02
2567 4351 3.129871 GGCAGCTCTGTGATATCTGTTC 58.870 50.000 3.98 0.00 0.00 3.18
2579 4363 0.968405 GATCTCCCTAGGCAGCTCTG 59.032 60.000 2.05 0.00 0.00 3.35
2589 4373 1.093408 ATCCCCCGATGATCTCCCTA 58.907 55.000 0.00 0.00 0.00 3.53
2595 4379 3.181450 ACTTCTTCAATCCCCCGATGATC 60.181 47.826 0.00 0.00 0.00 2.92
2596 4380 2.780010 ACTTCTTCAATCCCCCGATGAT 59.220 45.455 0.00 0.00 0.00 2.45
2597 4381 2.196595 ACTTCTTCAATCCCCCGATGA 58.803 47.619 0.00 0.00 0.00 2.92
2601 4385 2.489938 TCAACTTCTTCAATCCCCCG 57.510 50.000 0.00 0.00 0.00 5.73
2605 4389 5.411053 CCAGAGTCTTCAACTTCTTCAATCC 59.589 44.000 0.00 0.00 38.74 3.01
2608 4392 5.360591 GTCCAGAGTCTTCAACTTCTTCAA 58.639 41.667 0.00 0.00 38.74 2.69
2610 4394 4.039852 AGGTCCAGAGTCTTCAACTTCTTC 59.960 45.833 0.00 0.00 38.74 2.87
2664 4448 0.540133 GTAGGTCCCCGATCTCCCTC 60.540 65.000 0.00 0.00 0.00 4.30
2682 4466 4.841246 AGGTCCAGAGTCTCTAAATGTTGT 59.159 41.667 0.94 0.00 0.00 3.32
2709 4776 5.050490 AGATTTGTCATCCTTTCGATACCG 58.950 41.667 0.00 0.00 37.07 4.02
2714 4781 5.175859 GTGGTAGATTTGTCATCCTTTCGA 58.824 41.667 0.00 0.00 0.00 3.71
2716 4783 4.332819 CCGTGGTAGATTTGTCATCCTTTC 59.667 45.833 0.00 0.00 0.00 2.62
2748 4815 5.016275 GCGTTTTCAAATGCTGCAATTTA 57.984 34.783 6.36 0.00 45.18 1.40
2784 4851 1.438651 GCAGCTTTGTGATCCGTGTA 58.561 50.000 0.00 0.00 0.00 2.90
2788 4855 0.169672 CTTGGCAGCTTTGTGATCCG 59.830 55.000 0.00 0.00 0.00 4.18
2817 4884 8.114102 TCAAGAGTCTCTAAGTTATGGAGGTTA 58.886 37.037 1.88 0.00 0.00 2.85
2923 5285 1.263356 AGCTTTACCACCGCTGTAGA 58.737 50.000 0.00 0.00 31.82 2.59
2964 5326 6.976934 AAATCCAAAAACTCCAGCTTCTTA 57.023 33.333 0.00 0.00 0.00 2.10
2985 5350 4.927425 GCACGGCCGAATATATCTTCTAAA 59.073 41.667 35.90 0.00 0.00 1.85
2996 5361 2.811747 CACGTGCACGGCCGAATA 60.812 61.111 39.21 14.35 44.95 1.75
3007 5372 2.742372 CCAGGGTAGTGCACGTGC 60.742 66.667 33.11 33.11 42.50 5.34
3008 5373 2.047274 CCCAGGGTAGTGCACGTG 60.047 66.667 12.28 12.28 0.00 4.49
3009 5374 1.827399 CTTCCCAGGGTAGTGCACGT 61.827 60.000 12.01 2.47 0.00 4.49
3010 5375 1.079127 CTTCCCAGGGTAGTGCACG 60.079 63.158 12.01 0.00 0.00 5.34
3061 5426 3.133365 AAGCTTGGCGGACCCACTT 62.133 57.895 0.00 0.00 45.34 3.16
3107 5475 1.482593 ACAGGATCTCCTTGGCTAACG 59.517 52.381 0.00 0.00 46.09 3.18
3116 5484 4.789807 CATTTCAATGGACAGGATCTCCT 58.210 43.478 0.00 0.00 38.67 3.69
3192 5597 8.503678 AAGTAATCCTTGATCCACTGGGGAAC 62.504 46.154 1.04 0.00 39.88 3.62
3223 5628 1.143684 TGATATCCAAGGAGCCAAGGC 59.856 52.381 2.02 2.02 42.33 4.35
3249 5654 1.377856 GCTCCTCCTCCAGTTTGCC 60.378 63.158 0.00 0.00 0.00 4.52
3335 5743 1.365633 GACGGCTATGGGCTCTCTG 59.634 63.158 0.13 0.00 41.46 3.35
3351 5759 1.671379 GGAACCCTTCACCGCTGAC 60.671 63.158 0.00 0.00 0.00 3.51
3378 5786 2.548057 GGCAGTCGACAATCAGTTTCAA 59.452 45.455 19.50 0.00 0.00 2.69
3458 5866 4.315803 CACCGTAGAACTGGAACTCAAAT 58.684 43.478 0.00 0.00 0.00 2.32
3573 5981 1.134007 TGCTGCTCCTCCATACCATTG 60.134 52.381 0.00 0.00 0.00 2.82
3679 6114 2.579207 TGCTAGGAAAACCTCGATCG 57.421 50.000 9.36 9.36 0.00 3.69
3694 6129 0.692476 TGCCAAGCTCTCCTTTGCTA 59.308 50.000 0.00 0.00 41.46 3.49
3734 6181 3.978723 CTCAGCGCCAGTCCGACTG 62.979 68.421 19.97 19.97 45.53 3.51
3735 6182 3.753434 CTCAGCGCCAGTCCGACT 61.753 66.667 2.29 0.00 0.00 4.18
3736 6183 3.973267 GACTCAGCGCCAGTCCGAC 62.973 68.421 21.33 2.59 35.19 4.79
3737 6184 3.749064 GACTCAGCGCCAGTCCGA 61.749 66.667 21.33 2.19 35.19 4.55
3738 6185 2.771763 AAAGACTCAGCGCCAGTCCG 62.772 60.000 25.93 4.67 41.20 4.79
3753 6200 4.020573 TGCACTATTCTTCTCCGGAAAAGA 60.021 41.667 16.41 16.41 0.00 2.52
3754 6201 4.093556 GTGCACTATTCTTCTCCGGAAAAG 59.906 45.833 11.54 11.54 0.00 2.27
3756 6203 3.007506 TGTGCACTATTCTTCTCCGGAAA 59.992 43.478 19.41 0.00 0.00 3.13
3757 6204 2.565391 TGTGCACTATTCTTCTCCGGAA 59.435 45.455 19.41 0.00 0.00 4.30
3758 6205 2.166459 CTGTGCACTATTCTTCTCCGGA 59.834 50.000 19.41 2.93 0.00 5.14
3759 6206 2.544685 CTGTGCACTATTCTTCTCCGG 58.455 52.381 19.41 0.00 0.00 5.14
3760 6207 2.166459 TCCTGTGCACTATTCTTCTCCG 59.834 50.000 19.41 0.00 0.00 4.63
3770 6229 2.810400 GCTTGAAACCTCCTGTGCACTA 60.810 50.000 19.41 3.54 0.00 2.74
3773 6232 0.106769 TGCTTGAAACCTCCTGTGCA 60.107 50.000 0.00 0.00 0.00 4.57
3788 6250 4.335647 CCCGTCCCACTGCTGCTT 62.336 66.667 0.00 0.00 0.00 3.91
3797 6262 2.682136 TTGATCTCGCCCGTCCCA 60.682 61.111 0.00 0.00 0.00 4.37
3854 6334 0.169009 GAAACCCAATCACGCTGCTC 59.831 55.000 0.00 0.00 0.00 4.26
3876 6356 3.243367 TGTGTACATTTGCCTTGTCAAGC 60.243 43.478 7.09 3.84 0.00 4.01
3883 6363 1.877443 GGTCGTGTGTACATTTGCCTT 59.123 47.619 0.00 0.00 0.00 4.35
3888 6368 1.425412 GCTCGGTCGTGTGTACATTT 58.575 50.000 0.00 0.00 0.00 2.32
3889 6369 0.731514 CGCTCGGTCGTGTGTACATT 60.732 55.000 0.00 0.00 0.00 2.71
3890 6370 1.154093 CGCTCGGTCGTGTGTACAT 60.154 57.895 0.00 0.00 0.00 2.29
3891 6371 2.178892 CTCGCTCGGTCGTGTGTACA 62.179 60.000 0.00 0.00 0.00 2.90
3892 6372 1.511464 CTCGCTCGGTCGTGTGTAC 60.511 63.158 6.01 0.00 0.00 2.90
3893 6373 2.683859 CCTCGCTCGGTCGTGTGTA 61.684 63.158 6.01 0.00 0.00 2.90
3895 6375 2.191354 TTACCTCGCTCGGTCGTGTG 62.191 60.000 0.00 0.35 38.49 3.82
3904 6396 2.104530 GGACGGCTTACCTCGCTC 59.895 66.667 0.00 0.00 0.00 5.03
3906 6398 2.508663 GTGGACGGCTTACCTCGC 60.509 66.667 0.00 0.00 0.00 5.03
3915 6407 0.997196 GTTGATTACGAGTGGACGGC 59.003 55.000 0.00 0.00 37.61 5.68
3948 6468 9.841295 AGTGTGTTAGTGGTAATAAAAAGAAGA 57.159 29.630 0.00 0.00 0.00 2.87
3956 6476 6.768861 ACAAGCAAGTGTGTTAGTGGTAATAA 59.231 34.615 0.00 0.00 0.00 1.40
3958 6478 5.130350 ACAAGCAAGTGTGTTAGTGGTAAT 58.870 37.500 0.00 0.00 0.00 1.89
3960 6480 4.145365 ACAAGCAAGTGTGTTAGTGGTA 57.855 40.909 0.00 0.00 0.00 3.25
3985 6518 2.734606 TCTGCAAATAAAGACGACGGTG 59.265 45.455 0.00 0.00 0.00 4.94
4013 6550 7.697691 CGATGAGCAAATAACCTTCAGTAATT 58.302 34.615 0.00 0.00 0.00 1.40
4014 6551 7.251704 CGATGAGCAAATAACCTTCAGTAAT 57.748 36.000 0.00 0.00 0.00 1.89
4015 6552 6.662414 CGATGAGCAAATAACCTTCAGTAA 57.338 37.500 0.00 0.00 0.00 2.24
4058 6595 3.906400 TGCCGGAGGGACAGTTACTGA 62.906 57.143 20.07 0.00 44.49 3.41
4059 6596 1.541310 TGCCGGAGGGACAGTTACTG 61.541 60.000 5.05 11.21 44.49 2.74
4061 6598 3.384348 TGCCGGAGGGACAGTTAC 58.616 61.111 5.05 0.00 44.49 2.50


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.