Multiple sequence alignment - TraesCS4A01G488800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G488800 chr4A 100.000 4078 0 0 973 5050 740151151 740147074 0.000000e+00 7531.0
1 TraesCS4A01G488800 chr4A 95.681 2732 108 6 1317 4042 739605801 739608528 0.000000e+00 4383.0
2 TraesCS4A01G488800 chr4A 86.472 2735 314 32 1320 4037 742160881 742158186 0.000000e+00 2950.0
3 TraesCS4A01G488800 chr4A 87.535 2487 253 31 1573 4042 740494226 740496672 0.000000e+00 2822.0
4 TraesCS4A01G488800 chr4A 87.099 1589 168 21 2453 4030 742021132 742022694 0.000000e+00 1764.0
5 TraesCS4A01G488800 chr4A 84.470 1848 222 30 2212 4042 740122932 740121133 0.000000e+00 1762.0
6 TraesCS4A01G488800 chr4A 88.031 1437 159 6 2614 4042 739886493 739887924 0.000000e+00 1688.0
7 TraesCS4A01G488800 chr4A 83.492 1575 226 18 2476 4042 741421972 741423520 0.000000e+00 1437.0
8 TraesCS4A01G488800 chr4A 100.000 639 0 0 1 639 740152123 740151485 0.000000e+00 1181.0
9 TraesCS4A01G488800 chr4A 80.053 1138 163 42 1317 2412 742020013 742021128 0.000000e+00 785.0
10 TraesCS4A01G488800 chr4A 83.068 880 128 16 3173 4042 741805100 741805968 0.000000e+00 780.0
11 TraesCS4A01G488800 chr4A 83.176 850 105 19 1324 2140 740123807 740122963 0.000000e+00 743.0
12 TraesCS4A01G488800 chr4A 93.220 354 22 1 973 1324 739605545 739605898 2.080000e-143 520.0
13 TraesCS4A01G488800 chr4A 96.479 284 7 2 4770 5050 691297544 691297261 2.750000e-127 466.0
14 TraesCS4A01G488800 chr4A 90.857 350 29 2 980 1326 742019763 742020112 2.750000e-127 466.0
15 TraesCS4A01G488800 chr4A 86.782 348 42 3 980 1324 742161133 742160787 7.930000e-103 385.0
16 TraesCS4A01G488800 chr4A 86.667 360 17 15 1 330 739604459 739604817 2.220000e-98 370.0
17 TraesCS4A01G488800 chr4A 85.519 366 17 11 1 330 739983480 739983115 2.890000e-92 350.0
18 TraesCS4A01G488800 chr4A 90.244 205 15 3 122 325 742019045 742019245 3.880000e-66 263.0
19 TraesCS4A01G488800 chr4A 91.875 160 13 0 171 330 740493829 740493988 1.830000e-54 224.0
20 TraesCS4A01G488800 chr4A 91.603 131 8 2 1 130 740489115 740489243 1.440000e-40 178.0
21 TraesCS4A01G488800 chr4A 97.895 95 2 0 1230 1324 740150804 740150710 1.120000e-36 165.0
22 TraesCS4A01G488800 chr4A 75.964 337 66 11 2006 2334 733800036 733800365 5.230000e-35 159.0
23 TraesCS4A01G488800 chr4A 91.304 115 9 1 1 114 741362402 741362288 6.770000e-34 156.0
24 TraesCS4A01G488800 chr4A 91.304 115 9 1 1 114 741406869 741406755 6.770000e-34 156.0
25 TraesCS4A01G488800 chr4A 75.186 403 60 21 1 390 742162175 742161800 2.430000e-33 154.0
26 TraesCS4A01G488800 chr4A 98.276 58 1 0 141 198 740489281 740489338 8.940000e-18 102.0
27 TraesCS4A01G488800 chr4A 94.737 57 3 0 334 390 740494020 740494076 6.960000e-14 89.8
28 TraesCS4A01G488800 chr7A 87.954 2756 260 36 1320 4042 3843947 3841231 0.000000e+00 3184.0
29 TraesCS4A01G488800 chr7A 80.847 2715 408 57 1334 4030 3155773 3153153 0.000000e+00 2030.0
30 TraesCS4A01G488800 chr7A 85.995 1578 195 15 2482 4042 3804703 3803135 0.000000e+00 1666.0
31 TraesCS4A01G488800 chr7A 85.949 1459 193 9 2590 4042 2800443 2798991 0.000000e+00 1548.0
32 TraesCS4A01G488800 chr7A 89.796 343 32 3 985 1324 3844195 3843853 2.160000e-118 436.0
33 TraesCS4A01G488800 chr7D 87.445 2047 200 28 2012 4042 4009766 4007761 0.000000e+00 2303.0
34 TraesCS4A01G488800 chr7D 81.815 2722 417 51 1336 4030 3552396 3549726 0.000000e+00 2213.0
35 TraesCS4A01G488800 chr7D 81.243 2735 422 63 1331 4030 2904672 2901994 0.000000e+00 2124.0
36 TraesCS4A01G488800 chr7D 87.111 1544 181 14 2468 3998 3423787 3422249 0.000000e+00 1733.0
37 TraesCS4A01G488800 chr7D 91.364 660 56 1 1320 1979 4010366 4009708 0.000000e+00 902.0
38 TraesCS4A01G488800 chr7D 88.398 543 41 17 4033 4561 27245292 27245826 7.130000e-178 634.0
39 TraesCS4A01G488800 chr7D 84.018 219 6 13 4033 4224 490360132 490359916 3.110000e-42 183.0
40 TraesCS4A01G488800 chr7D 91.111 135 11 1 4561 4695 27245982 27246115 1.120000e-41 182.0
41 TraesCS4A01G488800 chr7D 88.889 90 3 3 4686 4768 27247695 27247606 2.490000e-18 104.0
42 TraesCS4A01G488800 chr2A 89.599 548 27 14 4040 4561 753432134 753431591 0.000000e+00 669.0
43 TraesCS4A01G488800 chr2A 85.169 236 9 7 4041 4250 690322336 690322571 8.510000e-53 219.0
44 TraesCS4A01G488800 chr2A 91.852 135 9 2 4561 4695 753431435 753431303 2.400000e-43 187.0
45 TraesCS4A01G488800 chr2A 94.872 78 4 0 4691 4768 753429733 753429810 6.870000e-24 122.0
46 TraesCS4A01G488800 chr3B 87.709 537 45 13 4041 4561 521516251 521515720 1.550000e-169 606.0
47 TraesCS4A01G488800 chr3B 87.127 536 48 8 4042 4561 18235102 18234572 5.630000e-164 588.0
48 TraesCS4A01G488800 chr3B 97.436 39 1 0 4561 4599 521515564 521515526 3.260000e-07 67.6
49 TraesCS4A01G488800 chrUn 91.244 434 34 1 4128 4561 249745874 249745445 5.630000e-164 588.0
50 TraesCS4A01G488800 chrUn 91.244 434 34 1 4128 4561 309786245 309785816 5.630000e-164 588.0
51 TraesCS4A01G488800 chrUn 97.436 39 1 0 4561 4599 249745289 249745251 3.260000e-07 67.6
52 TraesCS4A01G488800 chrUn 97.436 39 1 0 4561 4599 309785660 309785622 3.260000e-07 67.6
53 TraesCS4A01G488800 chr7B 91.244 434 34 1 4128 4561 723017634 723018063 5.630000e-164 588.0
54 TraesCS4A01G488800 chr7B 94.077 287 13 3 4767 5050 723726251 723726536 2.790000e-117 433.0
55 TraesCS4A01G488800 chr7B 87.738 367 28 8 4027 4386 131082162 131082518 3.640000e-111 412.0
56 TraesCS4A01G488800 chr7B 97.436 39 1 0 4561 4599 723018219 723018257 3.260000e-07 67.6
57 TraesCS4A01G488800 chr5B 96.516 287 7 2 4767 5050 106811320 106811606 5.920000e-129 472.0
58 TraesCS4A01G488800 chr5B 88.068 352 24 6 4042 4386 544544479 544544139 7.880000e-108 401.0
59 TraesCS4A01G488800 chr5A 87.402 381 21 10 4032 4386 149207097 149207476 3.640000e-111 412.0
60 TraesCS4A01G488800 chr3D 85.523 373 26 15 4040 4386 460533050 460532680 1.030000e-96 364.0
61 TraesCS4A01G488800 chr3D 85.666 293 16 4 4032 4298 613710164 613709872 8.280000e-73 285.0
62 TraesCS4A01G488800 chr3D 88.182 110 9 3 4387 4495 534157381 534157275 1.480000e-25 128.0
63 TraesCS4A01G488800 chr6D 75.342 365 74 13 2848 3204 5367250 5366894 1.460000e-35 161.0
64 TraesCS4A01G488800 chr1B 94.444 90 4 1 4034 4123 174226308 174226396 2.450000e-28 137.0
65 TraesCS4A01G488800 chr1D 85.185 108 12 4 4393 4496 80314350 80314243 1.920000e-19 108.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G488800 chr4A 740147074 740152123 5049 True 2959.000000 7531 99.298333 1 5050 3 chr4A.!!$R6 5049
1 TraesCS4A01G488800 chr4A 739604459 739608528 4069 False 1757.666667 4383 91.856000 1 4042 3 chr4A.!!$F5 4041
2 TraesCS4A01G488800 chr4A 739886493 739887924 1431 False 1688.000000 1688 88.031000 2614 4042 1 chr4A.!!$F2 1428
3 TraesCS4A01G488800 chr4A 741421972 741423520 1548 False 1437.000000 1437 83.492000 2476 4042 1 chr4A.!!$F3 1566
4 TraesCS4A01G488800 chr4A 740121133 740123807 2674 True 1252.500000 1762 83.823000 1324 4042 2 chr4A.!!$R5 2718
5 TraesCS4A01G488800 chr4A 742158186 742162175 3989 True 1163.000000 2950 82.813333 1 4037 3 chr4A.!!$R7 4036
6 TraesCS4A01G488800 chr4A 740493829 740496672 2843 False 1045.266667 2822 91.382333 171 4042 3 chr4A.!!$F7 3871
7 TraesCS4A01G488800 chr4A 742019045 742022694 3649 False 819.500000 1764 87.063250 122 4030 4 chr4A.!!$F8 3908
8 TraesCS4A01G488800 chr4A 741805100 741805968 868 False 780.000000 780 83.068000 3173 4042 1 chr4A.!!$F4 869
9 TraesCS4A01G488800 chr7A 3153153 3155773 2620 True 2030.000000 2030 80.847000 1334 4030 1 chr7A.!!$R2 2696
10 TraesCS4A01G488800 chr7A 3841231 3844195 2964 True 1810.000000 3184 88.875000 985 4042 2 chr7A.!!$R4 3057
11 TraesCS4A01G488800 chr7A 3803135 3804703 1568 True 1666.000000 1666 85.995000 2482 4042 1 chr7A.!!$R3 1560
12 TraesCS4A01G488800 chr7A 2798991 2800443 1452 True 1548.000000 1548 85.949000 2590 4042 1 chr7A.!!$R1 1452
13 TraesCS4A01G488800 chr7D 3549726 3552396 2670 True 2213.000000 2213 81.815000 1336 4030 1 chr7D.!!$R3 2694
14 TraesCS4A01G488800 chr7D 2901994 2904672 2678 True 2124.000000 2124 81.243000 1331 4030 1 chr7D.!!$R1 2699
15 TraesCS4A01G488800 chr7D 3422249 3423787 1538 True 1733.000000 1733 87.111000 2468 3998 1 chr7D.!!$R2 1530
16 TraesCS4A01G488800 chr7D 4007761 4010366 2605 True 1602.500000 2303 89.404500 1320 4042 2 chr7D.!!$R6 2722
17 TraesCS4A01G488800 chr7D 27245292 27246115 823 False 408.000000 634 89.754500 4033 4695 2 chr7D.!!$F1 662
18 TraesCS4A01G488800 chr2A 753431303 753432134 831 True 428.000000 669 90.725500 4040 4695 2 chr2A.!!$R1 655
19 TraesCS4A01G488800 chr3B 18234572 18235102 530 True 588.000000 588 87.127000 4042 4561 1 chr3B.!!$R1 519
20 TraesCS4A01G488800 chr3B 521515526 521516251 725 True 336.800000 606 92.572500 4041 4599 2 chr3B.!!$R2 558
21 TraesCS4A01G488800 chrUn 249745251 249745874 623 True 327.800000 588 94.340000 4128 4599 2 chrUn.!!$R1 471
22 TraesCS4A01G488800 chrUn 309785622 309786245 623 True 327.800000 588 94.340000 4128 4599 2 chrUn.!!$R2 471
23 TraesCS4A01G488800 chr7B 723017634 723018257 623 False 327.800000 588 94.340000 4128 4599 2 chr7B.!!$F3 471

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
482 981 1.128507 ACGTCGTAGCATGTGCATTTG 59.871 47.619 7.83 0.0 45.16 2.32 F
1237 1777 0.322546 GGCCAACGAAGTCAGGGATT 60.323 55.000 0.00 0.0 45.00 3.01 F
1326 1866 0.250901 AGCCACGCAAACTCAAGGAT 60.251 50.000 0.00 0.0 0.00 3.24 F
2273 2880 0.530744 CTGGGACTTCCGTCGAATCA 59.469 55.000 0.00 0.0 41.16 2.57 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1301 1841 0.109597 GAGTTTGCGTGGCTTGATGG 60.110 55.000 0.0 0.0 0.00 3.51 R
2412 3021 1.134280 AGAGACATGTATGCACCAGCC 60.134 52.381 0.0 0.0 41.13 4.85 R
2797 3419 1.684983 GCCATTCTATTGCAGCACCAT 59.315 47.619 0.0 0.0 0.00 3.55 R
4257 4935 0.461516 CATCGAGCACTCACCAGCAT 60.462 55.000 0.0 0.0 0.00 3.79 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
104 106 4.156190 ACAGTACTACTTCATCACCACTCG 59.844 45.833 0.00 0.00 0.00 4.18
137 140 6.130298 TCACGACACTTGAATTTTGTGATT 57.870 33.333 11.54 0.00 35.83 2.57
139 142 4.739716 ACGACACTTGAATTTTGTGATTGC 59.260 37.500 11.54 0.00 35.83 3.56
160 189 8.701908 ATTGCATATGATAGATGAACCTTGTT 57.298 30.769 6.97 0.00 0.00 2.83
193 222 1.289160 AAGGGCATGCTTACCTCTCA 58.711 50.000 18.92 0.00 32.29 3.27
252 281 2.254152 AGGAGGACAGTGCCTGATTA 57.746 50.000 10.37 0.00 38.73 1.75
316 352 1.595489 GCCGTGAACGCATTGATGATC 60.595 52.381 0.00 0.00 38.18 2.92
330 366 6.484540 CATTGATGATCAAGTTGACTAGCAC 58.515 40.000 13.79 0.00 40.05 4.40
349 413 3.429085 CACAACTCAACTTGCACAACTC 58.571 45.455 0.00 0.00 0.00 3.01
399 898 6.875726 ACAATATATGTACAGCTGGTATGCAG 59.124 38.462 19.93 1.20 41.63 4.41
403 902 2.167693 TGTACAGCTGGTATGCAGGTAC 59.832 50.000 19.93 8.41 41.71 3.34
420 919 5.124776 GCAGGTACTACCATGTGCAATTAAA 59.875 40.000 8.01 0.00 41.95 1.52
422 921 7.630513 GCAGGTACTACCATGTGCAATTAAAAT 60.631 37.037 8.01 0.00 41.95 1.82
423 922 8.898761 CAGGTACTACCATGTGCAATTAAAATA 58.101 33.333 8.01 0.00 41.95 1.40
432 931 7.201548 CCATGTGCAATTAAAATAGTCAAAGCC 60.202 37.037 0.00 0.00 0.00 4.35
449 948 3.838244 AGCCTAGATCCACGCAATTAA 57.162 42.857 0.00 0.00 0.00 1.40
470 969 1.424403 TGAACCAATGCACGTCGTAG 58.576 50.000 0.00 0.00 0.00 3.51
482 981 1.128507 ACGTCGTAGCATGTGCATTTG 59.871 47.619 7.83 0.00 45.16 2.32
493 992 4.243383 GCATTTGGCACGGTCAAC 57.757 55.556 0.00 0.00 43.97 3.18
522 1021 1.290203 CACGCGATTAGCTGAACCAT 58.710 50.000 15.93 0.00 45.59 3.55
551 1051 4.278975 TGTACCATGTGCACTTGATACA 57.721 40.909 27.66 27.66 30.35 2.29
552 1052 4.646572 TGTACCATGTGCACTTGATACAA 58.353 39.130 28.69 16.81 30.03 2.41
553 1053 4.454161 TGTACCATGTGCACTTGATACAAC 59.546 41.667 28.69 19.40 30.03 3.32
583 1084 2.272471 GGGCTCCCGAGGGAAAAG 59.728 66.667 12.54 1.97 44.66 2.27
996 1533 5.118971 CACACATCATTATTGTGCACAAACC 59.881 40.000 34.06 0.00 46.65 3.27
1036 1574 2.362503 AGCGACCATGGACCTCGA 60.363 61.111 23.23 0.00 0.00 4.04
1037 1575 2.202756 GCGACCATGGACCTCGAC 60.203 66.667 23.23 12.64 0.00 4.20
1116 1656 2.432628 CAGACGGGCGTCAAGGAC 60.433 66.667 0.00 0.00 46.76 3.85
1131 1671 5.411781 GTCAAGGACGATGTTGAGTATCTT 58.588 41.667 0.00 0.00 33.37 2.40
1229 1769 2.032681 GCTCTGGGCCAACGAAGT 59.967 61.111 8.04 0.00 37.37 3.01
1230 1770 2.035442 GCTCTGGGCCAACGAAGTC 61.035 63.158 8.04 0.00 35.01 3.01
1231 1771 1.371183 CTCTGGGCCAACGAAGTCA 59.629 57.895 8.04 0.00 45.00 3.41
1232 1772 0.671781 CTCTGGGCCAACGAAGTCAG 60.672 60.000 8.04 0.00 45.00 3.51
1233 1773 1.672356 CTGGGCCAACGAAGTCAGG 60.672 63.158 8.04 0.00 45.00 3.86
1234 1774 2.359975 GGGCCAACGAAGTCAGGG 60.360 66.667 4.39 0.00 45.00 4.45
1235 1775 2.747686 GGCCAACGAAGTCAGGGA 59.252 61.111 0.00 0.00 45.00 4.20
1236 1776 1.299976 GGCCAACGAAGTCAGGGAT 59.700 57.895 0.00 0.00 45.00 3.85
1237 1777 0.322546 GGCCAACGAAGTCAGGGATT 60.323 55.000 0.00 0.00 45.00 3.01
1238 1778 1.534729 GCCAACGAAGTCAGGGATTT 58.465 50.000 0.00 0.00 45.00 2.17
1239 1779 1.200020 GCCAACGAAGTCAGGGATTTG 59.800 52.381 0.00 0.00 45.00 2.32
1240 1780 2.504367 CCAACGAAGTCAGGGATTTGT 58.496 47.619 0.00 0.00 45.00 2.83
1241 1781 2.484264 CCAACGAAGTCAGGGATTTGTC 59.516 50.000 0.00 0.00 45.00 3.18
1242 1782 2.080286 ACGAAGTCAGGGATTTGTCG 57.920 50.000 0.00 0.00 29.74 4.35
1243 1783 1.343465 ACGAAGTCAGGGATTTGTCGT 59.657 47.619 0.00 0.00 29.74 4.34
1244 1784 2.224209 ACGAAGTCAGGGATTTGTCGTT 60.224 45.455 0.00 0.00 29.74 3.85
1245 1785 2.412089 CGAAGTCAGGGATTTGTCGTTC 59.588 50.000 0.00 0.00 0.00 3.95
1246 1786 3.399330 GAAGTCAGGGATTTGTCGTTCA 58.601 45.455 0.00 0.00 0.00 3.18
1247 1787 3.703001 AGTCAGGGATTTGTCGTTCAT 57.297 42.857 0.00 0.00 0.00 2.57
1248 1788 4.819105 AGTCAGGGATTTGTCGTTCATA 57.181 40.909 0.00 0.00 0.00 2.15
1249 1789 5.160607 AGTCAGGGATTTGTCGTTCATAA 57.839 39.130 0.00 0.00 0.00 1.90
1250 1790 5.745227 AGTCAGGGATTTGTCGTTCATAAT 58.255 37.500 0.00 0.00 0.00 1.28
1251 1791 5.586243 AGTCAGGGATTTGTCGTTCATAATG 59.414 40.000 0.00 0.00 0.00 1.90
1252 1792 4.881273 TCAGGGATTTGTCGTTCATAATGG 59.119 41.667 0.00 0.00 0.00 3.16
1253 1793 4.881273 CAGGGATTTGTCGTTCATAATGGA 59.119 41.667 0.00 0.00 0.00 3.41
1254 1794 5.008019 CAGGGATTTGTCGTTCATAATGGAG 59.992 44.000 0.00 0.00 0.00 3.86
1255 1795 4.275936 GGGATTTGTCGTTCATAATGGAGG 59.724 45.833 0.00 0.00 0.00 4.30
1256 1796 5.123227 GGATTTGTCGTTCATAATGGAGGA 58.877 41.667 0.00 0.00 0.00 3.71
1257 1797 5.007724 GGATTTGTCGTTCATAATGGAGGAC 59.992 44.000 0.00 0.00 0.00 3.85
1258 1798 4.545208 TTGTCGTTCATAATGGAGGACA 57.455 40.909 7.40 7.40 33.25 4.02
1259 1799 4.753516 TGTCGTTCATAATGGAGGACAT 57.246 40.909 7.40 0.00 43.07 3.06
1260 1800 4.693283 TGTCGTTCATAATGGAGGACATC 58.307 43.478 7.40 0.00 39.40 3.06
1261 1801 4.161377 TGTCGTTCATAATGGAGGACATCA 59.839 41.667 7.40 0.00 39.40 3.07
1262 1802 5.163311 TGTCGTTCATAATGGAGGACATCAT 60.163 40.000 7.40 0.00 39.40 2.45
1263 1803 5.406780 GTCGTTCATAATGGAGGACATCATC 59.593 44.000 0.00 0.00 39.40 2.92
1264 1804 4.386954 CGTTCATAATGGAGGACATCATCG 59.613 45.833 0.00 0.00 39.40 3.84
1265 1805 5.541845 GTTCATAATGGAGGACATCATCGA 58.458 41.667 0.00 0.00 39.40 3.59
1266 1806 5.139435 TCATAATGGAGGACATCATCGAC 57.861 43.478 0.00 0.00 39.40 4.20
1267 1807 4.588528 TCATAATGGAGGACATCATCGACA 59.411 41.667 0.00 0.00 39.40 4.35
1268 1808 3.912496 AATGGAGGACATCATCGACAA 57.088 42.857 0.00 0.00 39.40 3.18
1269 1809 2.967599 TGGAGGACATCATCGACAAG 57.032 50.000 0.00 0.00 0.00 3.16
1270 1810 2.179427 TGGAGGACATCATCGACAAGT 58.821 47.619 0.00 0.00 0.00 3.16
1271 1811 2.567169 TGGAGGACATCATCGACAAGTT 59.433 45.455 0.00 0.00 0.00 2.66
1272 1812 3.190874 GGAGGACATCATCGACAAGTTC 58.809 50.000 0.00 0.00 0.00 3.01
1273 1813 3.190874 GAGGACATCATCGACAAGTTCC 58.809 50.000 0.00 0.00 0.00 3.62
1274 1814 2.834549 AGGACATCATCGACAAGTTCCT 59.165 45.455 0.00 0.00 0.00 3.36
1275 1815 2.932614 GGACATCATCGACAAGTTCCTG 59.067 50.000 0.00 0.00 0.00 3.86
1276 1816 2.932614 GACATCATCGACAAGTTCCTGG 59.067 50.000 0.00 0.00 0.00 4.45
1277 1817 2.303022 ACATCATCGACAAGTTCCTGGT 59.697 45.455 0.00 0.00 0.00 4.00
1278 1818 2.455674 TCATCGACAAGTTCCTGGTG 57.544 50.000 0.00 0.00 0.00 4.17
1279 1819 0.798776 CATCGACAAGTTCCTGGTGC 59.201 55.000 0.00 0.00 0.00 5.01
1280 1820 0.670546 ATCGACAAGTTCCTGGTGCG 60.671 55.000 0.00 0.00 0.00 5.34
1281 1821 2.946762 GACAAGTTCCTGGTGCGC 59.053 61.111 0.00 0.00 0.00 6.09
1282 1822 2.954753 GACAAGTTCCTGGTGCGCG 61.955 63.158 0.00 0.00 0.00 6.86
1283 1823 2.972505 CAAGTTCCTGGTGCGCGT 60.973 61.111 8.43 0.00 0.00 6.01
1284 1824 2.203153 AAGTTCCTGGTGCGCGTT 60.203 55.556 8.43 0.00 0.00 4.84
1285 1825 2.542907 AAGTTCCTGGTGCGCGTTG 61.543 57.895 8.43 0.00 0.00 4.10
1286 1826 2.933878 AAGTTCCTGGTGCGCGTTGA 62.934 55.000 8.43 0.00 0.00 3.18
1287 1827 2.664851 TTCCTGGTGCGCGTTGAG 60.665 61.111 8.43 0.00 0.00 3.02
1288 1828 4.680237 TCCTGGTGCGCGTTGAGG 62.680 66.667 8.43 8.60 0.00 3.86
1290 1830 4.680237 CTGGTGCGCGTTGAGGGA 62.680 66.667 8.43 0.00 34.27 4.20
1291 1831 4.680237 TGGTGCGCGTTGAGGGAG 62.680 66.667 8.43 0.00 34.27 4.30
1295 1835 4.742201 GCGCGTTGAGGGAGCTGA 62.742 66.667 8.43 0.00 34.27 4.26
1296 1836 2.507992 CGCGTTGAGGGAGCTGAG 60.508 66.667 0.00 0.00 34.27 3.35
1297 1837 2.817396 GCGTTGAGGGAGCTGAGC 60.817 66.667 0.00 0.00 0.00 4.26
1298 1838 2.125350 CGTTGAGGGAGCTGAGCC 60.125 66.667 0.00 0.00 0.00 4.70
1299 1839 2.654079 CGTTGAGGGAGCTGAGCCT 61.654 63.158 0.00 0.00 0.00 4.58
1300 1840 1.078567 GTTGAGGGAGCTGAGCCTG 60.079 63.158 0.00 0.00 0.00 4.85
1301 1841 2.964310 TTGAGGGAGCTGAGCCTGC 61.964 63.158 0.00 0.00 0.00 4.85
1302 1842 4.173924 GAGGGAGCTGAGCCTGCC 62.174 72.222 0.00 3.42 43.04 4.85
1304 1844 3.806667 GGGAGCTGAGCCTGCCAT 61.807 66.667 0.00 0.00 42.35 4.40
1305 1845 2.203181 GGAGCTGAGCCTGCCATC 60.203 66.667 0.00 0.00 0.00 3.51
1306 1846 2.588439 GAGCTGAGCCTGCCATCA 59.412 61.111 0.00 0.00 0.00 3.07
1307 1847 1.077930 GAGCTGAGCCTGCCATCAA 60.078 57.895 0.00 0.00 0.00 2.57
1308 1848 1.077644 AGCTGAGCCTGCCATCAAG 60.078 57.895 0.00 0.00 0.00 3.02
1309 1849 2.772691 GCTGAGCCTGCCATCAAGC 61.773 63.158 0.00 0.00 0.00 4.01
1310 1850 2.044650 TGAGCCTGCCATCAAGCC 60.045 61.111 0.00 0.00 29.97 4.35
1311 1851 2.044650 GAGCCTGCCATCAAGCCA 60.045 61.111 0.00 0.00 29.97 4.75
1312 1852 2.362120 AGCCTGCCATCAAGCCAC 60.362 61.111 0.00 0.00 29.97 5.01
1313 1853 3.818787 GCCTGCCATCAAGCCACG 61.819 66.667 0.00 0.00 0.00 4.94
1314 1854 3.818787 CCTGCCATCAAGCCACGC 61.819 66.667 0.00 0.00 0.00 5.34
1315 1855 3.057548 CTGCCATCAAGCCACGCA 61.058 61.111 0.00 0.00 0.00 5.24
1316 1856 2.596923 TGCCATCAAGCCACGCAA 60.597 55.556 0.00 0.00 0.00 4.85
1317 1857 2.144833 CTGCCATCAAGCCACGCAAA 62.145 55.000 0.00 0.00 0.00 3.68
1318 1858 1.734117 GCCATCAAGCCACGCAAAC 60.734 57.895 0.00 0.00 0.00 2.93
1322 1862 1.001487 CATCAAGCCACGCAAACTCAA 60.001 47.619 0.00 0.00 0.00 3.02
1326 1866 0.250901 AGCCACGCAAACTCAAGGAT 60.251 50.000 0.00 0.00 0.00 3.24
1374 1914 2.203153 AAGTTCCTGGTGCGCGTT 60.203 55.556 8.43 0.00 0.00 4.84
1599 2139 2.158813 TGACCCTCGCCTATTGGATTTC 60.159 50.000 0.00 0.00 34.57 2.17
1863 2403 1.203994 CTCCTTGAAATTGCTGGGCAG 59.796 52.381 0.00 0.00 40.61 4.85
2273 2880 0.530744 CTGGGACTTCCGTCGAATCA 59.469 55.000 0.00 0.00 41.16 2.57
2277 2884 2.464865 GGACTTCCGTCGAATCATCAG 58.535 52.381 0.00 0.00 41.16 2.90
2358 2967 9.035890 TCCAAGAGTTGAAAGTATCTAGATTCA 57.964 33.333 11.25 6.48 0.00 2.57
2412 3021 5.220416 GGACGATGAACTGGAATTAAACTCG 60.220 44.000 0.00 0.00 0.00 4.18
2551 3171 8.756486 TTGAATACTTAGGGGCCTTATAAAAC 57.244 34.615 0.84 0.00 0.00 2.43
2576 3197 9.143155 ACATTTCCACTAATTTGTTATATCCCC 57.857 33.333 0.00 0.00 0.00 4.81
2585 3206 7.448748 AATTTGTTATATCCCCTGCGTTATC 57.551 36.000 0.00 0.00 0.00 1.75
2607 3228 2.036958 TGGCGATGACAGGTATTTGG 57.963 50.000 0.00 0.00 0.00 3.28
2703 3325 6.116126 GGAAGCAGGATAATCACAACTACTT 58.884 40.000 0.00 0.00 0.00 2.24
2948 3570 6.440965 AGCTTTGGTCTAAGGTATACACTTCT 59.559 38.462 5.01 0.00 34.32 2.85
3002 3624 7.383687 ACGTGGAGAACATGAGAAAAATACTA 58.616 34.615 0.00 0.00 39.46 1.82
3113 3735 6.595682 AGATAGTTTGATATGGAAGTGGGTG 58.404 40.000 0.00 0.00 0.00 4.61
3204 3826 7.592938 TGAGTTGGTAAACAAAAGCATGATAG 58.407 34.615 0.00 0.00 41.58 2.08
3551 4184 4.964897 TCACACCATCCTAGTCATCTTGAT 59.035 41.667 0.00 0.00 0.00 2.57
3998 4647 1.486310 TCCCATCATGAAGAGAACCCG 59.514 52.381 0.00 0.00 0.00 5.28
4030 4679 1.194781 GCCCTCTCTCCACAACTCCA 61.195 60.000 0.00 0.00 0.00 3.86
4123 4772 5.071788 AGTGGTGATAGGAAAACTCAGTCAA 59.928 40.000 0.00 0.00 0.00 3.18
4143 4821 6.926272 AGTCAAAGATTACTGTCTCTGTTCAC 59.074 38.462 0.00 0.00 0.00 3.18
4242 4920 2.421399 GGCATGCCTCTTCCTTGCC 61.421 63.158 29.98 0.00 43.38 4.52
4257 4935 4.854173 TCCTTGCCTAGCATATTTGTTGA 58.146 39.130 0.00 0.00 38.76 3.18
4269 4947 3.928727 ATTTGTTGATGCTGGTGAGTG 57.071 42.857 0.00 0.00 0.00 3.51
4286 4964 3.625313 TGAGTGCTCGATGTTTGAAACAA 59.375 39.130 15.31 0.00 45.86 2.83
4337 5015 6.904626 AGATAAGGGTGGCATTATGGATATC 58.095 40.000 0.00 0.00 0.00 1.63
4360 5038 6.276091 TCAATAGATCGATGAGGAACAACAG 58.724 40.000 0.54 0.00 0.00 3.16
4589 5424 3.058914 CGTGATGACCTTCAAACAGGAAC 60.059 47.826 0.00 0.00 37.39 3.62
4617 5452 2.616510 CGCCTTCAGTTTCCTCCATTCT 60.617 50.000 0.00 0.00 0.00 2.40
4643 5478 3.492102 ACAGCCTAAGAGACTGCAAAA 57.508 42.857 0.00 0.00 34.72 2.44
4644 5479 4.026356 ACAGCCTAAGAGACTGCAAAAT 57.974 40.909 0.00 0.00 34.72 1.82
4688 5523 6.827727 AGCAGGTTAGAAACAACTCTCTTTA 58.172 36.000 0.00 0.00 0.00 1.85
4689 5524 6.706716 AGCAGGTTAGAAACAACTCTCTTTAC 59.293 38.462 0.00 0.00 0.00 2.01
4731 5566 8.763984 TTTTTCCCTGTTAAGTATAAACCACA 57.236 30.769 0.00 0.00 0.00 4.17
4732 5567 8.763984 TTTTCCCTGTTAAGTATAAACCACAA 57.236 30.769 0.00 0.00 0.00 3.33
4733 5568 7.748691 TTCCCTGTTAAGTATAAACCACAAC 57.251 36.000 0.00 0.00 0.00 3.32
4734 5569 7.081857 TCCCTGTTAAGTATAAACCACAACT 57.918 36.000 0.00 0.00 0.00 3.16
4735 5570 7.519927 TCCCTGTTAAGTATAAACCACAACTT 58.480 34.615 0.00 0.00 36.26 2.66
4736 5571 7.446013 TCCCTGTTAAGTATAAACCACAACTTG 59.554 37.037 0.00 0.00 34.23 3.16
4737 5572 7.229907 CCCTGTTAAGTATAAACCACAACTTGT 59.770 37.037 0.00 0.00 34.23 3.16
4739 5574 7.419204 TGTTAAGTATAAACCACAACTTGTGC 58.581 34.615 15.42 1.62 46.51 4.57
4740 5575 7.067129 TGTTAAGTATAAACCACAACTTGTGCA 59.933 33.333 15.42 2.03 46.51 4.57
4741 5576 5.689383 AGTATAAACCACAACTTGTGCAG 57.311 39.130 15.42 6.52 46.51 4.41
4742 5577 5.373222 AGTATAAACCACAACTTGTGCAGA 58.627 37.500 15.42 2.28 46.51 4.26
4743 5578 5.825679 AGTATAAACCACAACTTGTGCAGAA 59.174 36.000 15.42 0.00 46.51 3.02
4744 5579 3.951775 AAACCACAACTTGTGCAGAAA 57.048 38.095 15.42 0.00 46.51 2.52
4745 5580 3.951775 AACCACAACTTGTGCAGAAAA 57.048 38.095 15.42 0.00 46.51 2.29
4746 5581 3.230743 ACCACAACTTGTGCAGAAAAC 57.769 42.857 15.42 0.00 46.51 2.43
4747 5582 2.560542 ACCACAACTTGTGCAGAAAACA 59.439 40.909 15.42 0.00 46.51 2.83
4748 5583 2.923020 CCACAACTTGTGCAGAAAACAC 59.077 45.455 15.42 0.00 46.51 3.32
4749 5584 3.573598 CACAACTTGTGCAGAAAACACA 58.426 40.909 8.97 0.00 45.90 3.72
4758 5593 6.698359 TGTGCAGAAAACACAAACTTTAAC 57.302 33.333 0.00 0.00 44.68 2.01
4759 5594 5.343593 TGTGCAGAAAACACAAACTTTAACG 59.656 36.000 0.00 0.00 44.68 3.18
4760 5595 5.569823 GTGCAGAAAACACAAACTTTAACGA 59.430 36.000 0.00 0.00 37.96 3.85
4761 5596 6.088350 GTGCAGAAAACACAAACTTTAACGAA 59.912 34.615 0.00 0.00 37.96 3.85
4762 5597 6.306837 TGCAGAAAACACAAACTTTAACGAAG 59.693 34.615 0.00 0.00 41.32 3.79
4763 5598 6.237463 GCAGAAAACACAAACTTTAACGAAGG 60.237 38.462 0.00 0.00 39.79 3.46
4764 5599 6.252655 CAGAAAACACAAACTTTAACGAAGGG 59.747 38.462 0.00 0.00 39.79 3.95
4765 5600 5.648178 AAACACAAACTTTAACGAAGGGT 57.352 34.783 0.00 0.00 39.79 4.34
4766 5601 6.756299 AAACACAAACTTTAACGAAGGGTA 57.244 33.333 0.00 0.00 39.79 3.69
4767 5602 5.739752 ACACAAACTTTAACGAAGGGTAC 57.260 39.130 0.00 0.00 39.79 3.34
4768 5603 5.430886 ACACAAACTTTAACGAAGGGTACT 58.569 37.500 0.00 0.00 39.79 2.73
4769 5604 5.882000 ACACAAACTTTAACGAAGGGTACTT 59.118 36.000 0.00 0.00 39.79 2.24
4770 5605 6.375174 ACACAAACTTTAACGAAGGGTACTTT 59.625 34.615 0.00 0.00 39.79 2.66
4771 5606 6.908820 CACAAACTTTAACGAAGGGTACTTTC 59.091 38.462 0.00 0.00 39.79 2.62
4772 5607 6.598850 ACAAACTTTAACGAAGGGTACTTTCA 59.401 34.615 10.01 0.00 39.79 2.69
4773 5608 6.609237 AACTTTAACGAAGGGTACTTTCAC 57.391 37.500 10.01 0.00 39.79 3.18
4774 5609 5.673514 ACTTTAACGAAGGGTACTTTCACA 58.326 37.500 10.01 0.00 39.79 3.58
4775 5610 5.525012 ACTTTAACGAAGGGTACTTTCACAC 59.475 40.000 10.01 0.00 39.79 3.82
4776 5611 3.832615 AACGAAGGGTACTTTCACACT 57.167 42.857 10.01 0.00 36.97 3.55
4777 5612 3.832615 ACGAAGGGTACTTTCACACTT 57.167 42.857 10.01 0.00 44.86 3.16
4778 5613 3.463944 ACGAAGGGTACTTTCACACTTG 58.536 45.455 0.00 0.00 42.24 3.16
4779 5614 3.118519 ACGAAGGGTACTTTCACACTTGT 60.119 43.478 0.00 0.00 42.24 3.16
4780 5615 3.875134 CGAAGGGTACTTTCACACTTGTT 59.125 43.478 0.00 0.00 42.24 2.83
4781 5616 4.260620 CGAAGGGTACTTTCACACTTGTTG 60.261 45.833 0.00 0.00 42.24 3.33
4782 5617 4.497291 AGGGTACTTTCACACTTGTTGA 57.503 40.909 0.00 0.00 0.00 3.18
4783 5618 4.451900 AGGGTACTTTCACACTTGTTGAG 58.548 43.478 0.00 0.00 0.00 3.02
4784 5619 3.564225 GGGTACTTTCACACTTGTTGAGG 59.436 47.826 0.00 0.00 0.00 3.86
4785 5620 4.196971 GGTACTTTCACACTTGTTGAGGT 58.803 43.478 0.00 0.00 0.00 3.85
4786 5621 4.638865 GGTACTTTCACACTTGTTGAGGTT 59.361 41.667 0.00 0.00 0.00 3.50
4787 5622 4.701956 ACTTTCACACTTGTTGAGGTTG 57.298 40.909 0.00 0.00 0.00 3.77
4788 5623 3.119495 ACTTTCACACTTGTTGAGGTTGC 60.119 43.478 0.00 0.00 0.00 4.17
4789 5624 2.121291 TCACACTTGTTGAGGTTGCA 57.879 45.000 0.00 0.00 0.00 4.08
4790 5625 1.742831 TCACACTTGTTGAGGTTGCAC 59.257 47.619 0.00 0.00 0.00 4.57
4791 5626 1.472082 CACACTTGTTGAGGTTGCACA 59.528 47.619 0.00 0.00 0.00 4.57
4792 5627 1.472480 ACACTTGTTGAGGTTGCACAC 59.528 47.619 0.00 0.00 0.00 3.82
4793 5628 0.732571 ACTTGTTGAGGTTGCACACG 59.267 50.000 0.00 0.00 0.00 4.49
4794 5629 0.029300 CTTGTTGAGGTTGCACACGG 59.971 55.000 0.00 0.00 0.00 4.94
4795 5630 1.380403 TTGTTGAGGTTGCACACGGG 61.380 55.000 0.00 0.00 0.00 5.28
4796 5631 1.822186 GTTGAGGTTGCACACGGGT 60.822 57.895 0.00 0.00 0.00 5.28
4797 5632 1.525077 TTGAGGTTGCACACGGGTC 60.525 57.895 0.00 0.00 0.00 4.46
4798 5633 2.110213 GAGGTTGCACACGGGTCA 59.890 61.111 0.00 0.00 0.00 4.02
4799 5634 1.302511 GAGGTTGCACACGGGTCAT 60.303 57.895 0.00 0.00 0.00 3.06
4800 5635 1.298859 GAGGTTGCACACGGGTCATC 61.299 60.000 0.00 0.00 0.00 2.92
4801 5636 1.599518 GGTTGCACACGGGTCATCA 60.600 57.895 0.00 0.00 0.00 3.07
4802 5637 1.574428 GTTGCACACGGGTCATCAC 59.426 57.895 0.00 0.00 0.00 3.06
4803 5638 1.147153 TTGCACACGGGTCATCACA 59.853 52.632 0.00 0.00 0.00 3.58
4804 5639 1.163420 TTGCACACGGGTCATCACAC 61.163 55.000 0.00 0.00 0.00 3.82
4805 5640 2.325082 GCACACGGGTCATCACACC 61.325 63.158 0.00 0.00 35.42 4.16
4809 5644 3.870606 CGGGTCATCACACCGTTC 58.129 61.111 0.00 0.00 42.53 3.95
4810 5645 1.005512 CGGGTCATCACACCGTTCA 60.006 57.895 0.00 0.00 42.53 3.18
4811 5646 0.391130 CGGGTCATCACACCGTTCAT 60.391 55.000 0.00 0.00 42.53 2.57
4812 5647 1.086696 GGGTCATCACACCGTTCATG 58.913 55.000 0.00 0.00 37.30 3.07
4813 5648 1.610624 GGGTCATCACACCGTTCATGT 60.611 52.381 0.00 0.00 37.30 3.21
4814 5649 1.732259 GGTCATCACACCGTTCATGTC 59.268 52.381 0.00 0.00 0.00 3.06
4815 5650 2.612972 GGTCATCACACCGTTCATGTCT 60.613 50.000 0.00 0.00 0.00 3.41
4816 5651 2.413112 GTCATCACACCGTTCATGTCTG 59.587 50.000 0.00 0.00 0.00 3.51
4817 5652 1.129251 CATCACACCGTTCATGTCTGC 59.871 52.381 0.00 0.00 0.00 4.26
4818 5653 0.105778 TCACACCGTTCATGTCTGCA 59.894 50.000 0.00 0.00 0.00 4.41
4819 5654 0.943673 CACACCGTTCATGTCTGCAA 59.056 50.000 0.00 0.00 0.00 4.08
4820 5655 0.944386 ACACCGTTCATGTCTGCAAC 59.056 50.000 0.00 0.00 0.00 4.17
4821 5656 0.943673 CACCGTTCATGTCTGCAACA 59.056 50.000 4.56 4.56 43.51 3.33
4823 5658 2.030893 CACCGTTCATGTCTGCAACATT 60.031 45.455 10.56 0.00 46.73 2.71
4824 5659 2.226437 ACCGTTCATGTCTGCAACATTC 59.774 45.455 10.56 5.67 46.73 2.67
4825 5660 2.226200 CCGTTCATGTCTGCAACATTCA 59.774 45.455 10.56 1.07 46.73 2.57
4826 5661 3.304592 CCGTTCATGTCTGCAACATTCAA 60.305 43.478 10.56 5.79 46.73 2.69
4827 5662 3.910170 CGTTCATGTCTGCAACATTCAAG 59.090 43.478 10.56 2.77 46.73 3.02
4828 5663 4.319694 CGTTCATGTCTGCAACATTCAAGA 60.320 41.667 10.56 4.57 46.73 3.02
4829 5664 5.522456 GTTCATGTCTGCAACATTCAAGAA 58.478 37.500 10.56 8.91 46.73 2.52
4830 5665 5.366829 TCATGTCTGCAACATTCAAGAAG 57.633 39.130 10.56 1.43 46.73 2.85
4831 5666 5.065235 TCATGTCTGCAACATTCAAGAAGA 58.935 37.500 10.56 3.24 46.73 2.87
4832 5667 4.818534 TGTCTGCAACATTCAAGAAGAC 57.181 40.909 0.00 0.00 34.52 3.01
4833 5668 3.565482 TGTCTGCAACATTCAAGAAGACC 59.435 43.478 0.00 0.00 33.29 3.85
4834 5669 3.565482 GTCTGCAACATTCAAGAAGACCA 59.435 43.478 0.00 0.00 0.00 4.02
4835 5670 4.036734 GTCTGCAACATTCAAGAAGACCAA 59.963 41.667 0.00 0.00 0.00 3.67
4836 5671 4.644234 TCTGCAACATTCAAGAAGACCAAA 59.356 37.500 0.00 0.00 0.00 3.28
4837 5672 4.935702 TGCAACATTCAAGAAGACCAAAG 58.064 39.130 0.00 0.00 0.00 2.77
4838 5673 4.644234 TGCAACATTCAAGAAGACCAAAGA 59.356 37.500 0.00 0.00 0.00 2.52
4839 5674 5.126869 TGCAACATTCAAGAAGACCAAAGAA 59.873 36.000 0.00 0.00 0.00 2.52
4840 5675 5.460091 GCAACATTCAAGAAGACCAAAGAAC 59.540 40.000 0.00 0.00 0.00 3.01
4841 5676 6.563422 CAACATTCAAGAAGACCAAAGAACA 58.437 36.000 0.00 0.00 0.00 3.18
4842 5677 6.773976 ACATTCAAGAAGACCAAAGAACAA 57.226 33.333 0.00 0.00 0.00 2.83
4843 5678 7.352079 ACATTCAAGAAGACCAAAGAACAAT 57.648 32.000 0.00 0.00 0.00 2.71
4844 5679 7.205297 ACATTCAAGAAGACCAAAGAACAATG 58.795 34.615 0.00 0.00 0.00 2.82
4845 5680 5.772825 TCAAGAAGACCAAAGAACAATGG 57.227 39.130 0.00 0.00 42.60 3.16
4846 5681 4.584325 TCAAGAAGACCAAAGAACAATGGG 59.416 41.667 0.00 0.00 41.17 4.00
4847 5682 4.453480 AGAAGACCAAAGAACAATGGGA 57.547 40.909 0.00 0.00 41.17 4.37
4848 5683 4.803452 AGAAGACCAAAGAACAATGGGAA 58.197 39.130 0.00 0.00 41.17 3.97
4849 5684 5.397360 AGAAGACCAAAGAACAATGGGAAT 58.603 37.500 0.00 0.00 41.17 3.01
4850 5685 5.244626 AGAAGACCAAAGAACAATGGGAATG 59.755 40.000 0.00 0.00 41.17 2.67
4851 5686 4.482990 AGACCAAAGAACAATGGGAATGT 58.517 39.130 0.00 0.00 41.17 2.71
4852 5687 4.524328 AGACCAAAGAACAATGGGAATGTC 59.476 41.667 0.00 0.00 41.17 3.06
4853 5688 4.222336 ACCAAAGAACAATGGGAATGTCA 58.778 39.130 0.00 0.00 41.17 3.58
4854 5689 4.653341 ACCAAAGAACAATGGGAATGTCAA 59.347 37.500 0.00 0.00 41.17 3.18
4855 5690 5.130145 ACCAAAGAACAATGGGAATGTCAAA 59.870 36.000 0.00 0.00 41.17 2.69
4856 5691 5.466393 CCAAAGAACAATGGGAATGTCAAAC 59.534 40.000 0.00 0.00 32.87 2.93
4857 5692 5.867903 AAGAACAATGGGAATGTCAAACA 57.132 34.783 0.00 0.00 0.00 2.83
4858 5693 6.423776 AAGAACAATGGGAATGTCAAACAT 57.576 33.333 0.00 0.00 41.31 2.71
4872 5707 8.647143 AATGTCAAACATTTTAACAAGACCAG 57.353 30.769 0.00 0.00 45.80 4.00
4873 5708 6.039616 TGTCAAACATTTTAACAAGACCAGC 58.960 36.000 0.00 0.00 0.00 4.85
4874 5709 6.039616 GTCAAACATTTTAACAAGACCAGCA 58.960 36.000 0.00 0.00 0.00 4.41
4875 5710 6.533367 GTCAAACATTTTAACAAGACCAGCAA 59.467 34.615 0.00 0.00 0.00 3.91
4876 5711 6.756074 TCAAACATTTTAACAAGACCAGCAAG 59.244 34.615 0.00 0.00 0.00 4.01
4877 5712 5.852282 ACATTTTAACAAGACCAGCAAGT 57.148 34.783 0.00 0.00 0.00 3.16
4878 5713 5.591099 ACATTTTAACAAGACCAGCAAGTG 58.409 37.500 0.00 0.00 0.00 3.16
4879 5714 5.359576 ACATTTTAACAAGACCAGCAAGTGA 59.640 36.000 0.00 0.00 0.00 3.41
4880 5715 5.499139 TTTTAACAAGACCAGCAAGTGAG 57.501 39.130 0.00 0.00 0.00 3.51
4881 5716 4.415881 TTAACAAGACCAGCAAGTGAGA 57.584 40.909 0.00 0.00 0.00 3.27
4882 5717 2.246719 ACAAGACCAGCAAGTGAGAC 57.753 50.000 0.00 0.00 0.00 3.36
4883 5718 1.486310 ACAAGACCAGCAAGTGAGACA 59.514 47.619 0.00 0.00 0.00 3.41
4884 5719 2.141517 CAAGACCAGCAAGTGAGACAG 58.858 52.381 0.00 0.00 0.00 3.51
4885 5720 0.683973 AGACCAGCAAGTGAGACAGG 59.316 55.000 0.00 0.00 0.00 4.00
4886 5721 0.681733 GACCAGCAAGTGAGACAGGA 59.318 55.000 0.00 0.00 0.00 3.86
4887 5722 1.070758 GACCAGCAAGTGAGACAGGAA 59.929 52.381 0.00 0.00 0.00 3.36
4888 5723 1.701847 ACCAGCAAGTGAGACAGGAAT 59.298 47.619 0.00 0.00 0.00 3.01
4889 5724 2.082231 CCAGCAAGTGAGACAGGAATG 58.918 52.381 0.00 0.00 0.00 2.67
4890 5725 2.289882 CCAGCAAGTGAGACAGGAATGA 60.290 50.000 0.00 0.00 0.00 2.57
4891 5726 2.740981 CAGCAAGTGAGACAGGAATGAC 59.259 50.000 0.00 0.00 0.00 3.06
4892 5727 2.079925 GCAAGTGAGACAGGAATGACC 58.920 52.381 0.00 0.00 39.35 4.02
4893 5728 2.341257 CAAGTGAGACAGGAATGACCG 58.659 52.381 0.00 0.00 44.74 4.79
4894 5729 1.924731 AGTGAGACAGGAATGACCGA 58.075 50.000 0.00 0.00 44.74 4.69
4895 5730 1.821753 AGTGAGACAGGAATGACCGAG 59.178 52.381 0.00 0.00 44.74 4.63
4896 5731 1.819288 GTGAGACAGGAATGACCGAGA 59.181 52.381 0.00 0.00 44.74 4.04
4897 5732 2.231478 GTGAGACAGGAATGACCGAGAA 59.769 50.000 0.00 0.00 44.74 2.87
4898 5733 2.493675 TGAGACAGGAATGACCGAGAAG 59.506 50.000 0.00 0.00 44.74 2.85
4899 5734 1.205893 AGACAGGAATGACCGAGAAGC 59.794 52.381 0.00 0.00 44.74 3.86
4900 5735 0.108615 ACAGGAATGACCGAGAAGCG 60.109 55.000 0.00 0.00 44.74 4.68
4910 5745 3.345737 CGAGAAGCGGTATTGCAGA 57.654 52.632 0.00 0.00 37.31 4.26
4911 5746 1.640428 CGAGAAGCGGTATTGCAGAA 58.360 50.000 0.00 0.00 37.31 3.02
4912 5747 1.999735 CGAGAAGCGGTATTGCAGAAA 59.000 47.619 0.00 0.00 37.31 2.52
4913 5748 2.415168 CGAGAAGCGGTATTGCAGAAAA 59.585 45.455 0.00 0.00 37.31 2.29
4914 5749 3.725010 CGAGAAGCGGTATTGCAGAAAAC 60.725 47.826 0.00 0.00 37.31 2.43
4915 5750 3.146066 AGAAGCGGTATTGCAGAAAACA 58.854 40.909 0.00 0.00 37.31 2.83
4916 5751 3.758554 AGAAGCGGTATTGCAGAAAACAT 59.241 39.130 0.00 0.00 37.31 2.71
4917 5752 3.492421 AGCGGTATTGCAGAAAACATG 57.508 42.857 0.00 0.00 37.31 3.21
4918 5753 2.164219 AGCGGTATTGCAGAAAACATGG 59.836 45.455 0.00 0.00 37.31 3.66
4919 5754 2.163412 GCGGTATTGCAGAAAACATGGA 59.837 45.455 0.00 0.00 34.15 3.41
4920 5755 3.366883 GCGGTATTGCAGAAAACATGGAA 60.367 43.478 0.00 0.00 32.30 3.53
4921 5756 4.677779 GCGGTATTGCAGAAAACATGGAAT 60.678 41.667 0.00 0.00 41.03 3.01
4922 5757 5.410067 CGGTATTGCAGAAAACATGGAATT 58.590 37.500 0.00 0.00 39.18 2.17
4923 5758 6.559810 CGGTATTGCAGAAAACATGGAATTA 58.440 36.000 0.00 0.00 39.18 1.40
4924 5759 6.472163 CGGTATTGCAGAAAACATGGAATTAC 59.528 38.462 0.00 0.00 39.18 1.89
4925 5760 7.319646 GGTATTGCAGAAAACATGGAATTACA 58.680 34.615 0.00 0.00 39.18 2.41
4926 5761 7.489113 GGTATTGCAGAAAACATGGAATTACAG 59.511 37.037 0.00 0.00 39.18 2.74
4927 5762 6.403866 TTGCAGAAAACATGGAATTACAGT 57.596 33.333 0.00 0.00 0.00 3.55
4928 5763 7.517614 TTGCAGAAAACATGGAATTACAGTA 57.482 32.000 0.00 0.00 0.00 2.74
4929 5764 6.908825 TGCAGAAAACATGGAATTACAGTAC 58.091 36.000 0.00 0.00 0.00 2.73
4930 5765 6.488344 TGCAGAAAACATGGAATTACAGTACA 59.512 34.615 0.00 0.00 0.00 2.90
4931 5766 7.013750 TGCAGAAAACATGGAATTACAGTACAA 59.986 33.333 0.00 0.00 0.00 2.41
4932 5767 7.326063 GCAGAAAACATGGAATTACAGTACAAC 59.674 37.037 0.00 0.00 0.00 3.32
4933 5768 8.567948 CAGAAAACATGGAATTACAGTACAACT 58.432 33.333 0.00 0.00 0.00 3.16
4950 5785 8.428186 AGTACAACTGAACGATAAAACAGAAA 57.572 30.769 0.00 0.00 34.88 2.52
4951 5786 8.548721 AGTACAACTGAACGATAAAACAGAAAG 58.451 33.333 0.00 0.00 34.88 2.62
4952 5787 7.548196 ACAACTGAACGATAAAACAGAAAGA 57.452 32.000 0.00 0.00 34.88 2.52
4953 5788 7.630924 ACAACTGAACGATAAAACAGAAAGAG 58.369 34.615 0.00 0.00 34.88 2.85
4954 5789 6.787085 ACTGAACGATAAAACAGAAAGAGG 57.213 37.500 0.00 0.00 34.88 3.69
4955 5790 5.701290 ACTGAACGATAAAACAGAAAGAGGG 59.299 40.000 0.00 0.00 34.88 4.30
4956 5791 5.860611 TGAACGATAAAACAGAAAGAGGGA 58.139 37.500 0.00 0.00 0.00 4.20
4957 5792 6.472887 TGAACGATAAAACAGAAAGAGGGAT 58.527 36.000 0.00 0.00 0.00 3.85
4958 5793 6.940298 TGAACGATAAAACAGAAAGAGGGATT 59.060 34.615 0.00 0.00 0.00 3.01
4959 5794 6.743575 ACGATAAAACAGAAAGAGGGATTG 57.256 37.500 0.00 0.00 0.00 2.67
4960 5795 6.238648 ACGATAAAACAGAAAGAGGGATTGT 58.761 36.000 0.00 0.00 0.00 2.71
4961 5796 7.391620 ACGATAAAACAGAAAGAGGGATTGTA 58.608 34.615 0.00 0.00 0.00 2.41
4962 5797 7.549488 ACGATAAAACAGAAAGAGGGATTGTAG 59.451 37.037 0.00 0.00 0.00 2.74
4963 5798 5.966742 AAAACAGAAAGAGGGATTGTAGC 57.033 39.130 0.00 0.00 0.00 3.58
4964 5799 4.640771 AACAGAAAGAGGGATTGTAGCA 57.359 40.909 0.00 0.00 0.00 3.49
4965 5800 4.851639 ACAGAAAGAGGGATTGTAGCAT 57.148 40.909 0.00 0.00 0.00 3.79
4966 5801 5.184892 ACAGAAAGAGGGATTGTAGCATT 57.815 39.130 0.00 0.00 0.00 3.56
4967 5802 4.946157 ACAGAAAGAGGGATTGTAGCATTG 59.054 41.667 0.00 0.00 0.00 2.82
4968 5803 5.188434 CAGAAAGAGGGATTGTAGCATTGA 58.812 41.667 0.00 0.00 0.00 2.57
4969 5804 5.826737 CAGAAAGAGGGATTGTAGCATTGAT 59.173 40.000 0.00 0.00 0.00 2.57
4970 5805 6.320672 CAGAAAGAGGGATTGTAGCATTGATT 59.679 38.462 0.00 0.00 0.00 2.57
4971 5806 6.894103 AGAAAGAGGGATTGTAGCATTGATTT 59.106 34.615 0.00 0.00 0.00 2.17
4972 5807 7.398332 AGAAAGAGGGATTGTAGCATTGATTTT 59.602 33.333 0.00 0.00 0.00 1.82
4973 5808 7.486407 AAGAGGGATTGTAGCATTGATTTTT 57.514 32.000 0.00 0.00 0.00 1.94
4996 5831 9.743581 TTTTTCCTCTTACCGTAATATTTCCTT 57.256 29.630 0.00 0.00 0.00 3.36
4997 5832 8.953368 TTTCCTCTTACCGTAATATTTCCTTC 57.047 34.615 0.00 0.00 0.00 3.46
4998 5833 7.664552 TCCTCTTACCGTAATATTTCCTTCA 57.335 36.000 0.00 0.00 0.00 3.02
4999 5834 8.081517 TCCTCTTACCGTAATATTTCCTTCAA 57.918 34.615 0.00 0.00 0.00 2.69
5000 5835 7.983484 TCCTCTTACCGTAATATTTCCTTCAAC 59.017 37.037 0.00 0.00 0.00 3.18
5001 5836 7.985752 CCTCTTACCGTAATATTTCCTTCAACT 59.014 37.037 0.00 0.00 0.00 3.16
5002 5837 8.937634 TCTTACCGTAATATTTCCTTCAACTC 57.062 34.615 0.00 0.00 0.00 3.01
5003 5838 8.755977 TCTTACCGTAATATTTCCTTCAACTCT 58.244 33.333 0.00 0.00 0.00 3.24
5004 5839 8.712285 TTACCGTAATATTTCCTTCAACTCTG 57.288 34.615 0.00 0.00 0.00 3.35
5005 5840 6.708285 ACCGTAATATTTCCTTCAACTCTGT 58.292 36.000 0.00 0.00 0.00 3.41
5006 5841 7.166167 ACCGTAATATTTCCTTCAACTCTGTT 58.834 34.615 0.00 0.00 0.00 3.16
5007 5842 7.119262 ACCGTAATATTTCCTTCAACTCTGTTG 59.881 37.037 4.25 4.25 0.00 3.33
5008 5843 6.961554 CGTAATATTTCCTTCAACTCTGTTGC 59.038 38.462 5.65 0.00 0.00 4.17
5009 5844 6.899393 AATATTTCCTTCAACTCTGTTGCA 57.101 33.333 5.65 0.00 0.00 4.08
5010 5845 7.472334 AATATTTCCTTCAACTCTGTTGCAT 57.528 32.000 5.65 0.00 0.00 3.96
5011 5846 5.796424 ATTTCCTTCAACTCTGTTGCATT 57.204 34.783 5.65 0.00 0.00 3.56
5012 5847 4.572985 TTCCTTCAACTCTGTTGCATTG 57.427 40.909 5.65 0.00 0.00 2.82
5013 5848 2.886523 TCCTTCAACTCTGTTGCATTGG 59.113 45.455 5.65 5.45 0.00 3.16
5014 5849 2.608752 CCTTCAACTCTGTTGCATTGGC 60.609 50.000 5.65 0.00 41.68 4.52
5015 5850 0.961019 TCAACTCTGTTGCATTGGCC 59.039 50.000 0.00 0.00 40.13 5.36
5016 5851 0.963962 CAACTCTGTTGCATTGGCCT 59.036 50.000 3.32 0.00 40.13 5.19
5017 5852 1.342174 CAACTCTGTTGCATTGGCCTT 59.658 47.619 3.32 0.00 40.13 4.35
5018 5853 0.963962 ACTCTGTTGCATTGGCCTTG 59.036 50.000 3.32 2.66 40.13 3.61
5019 5854 0.389426 CTCTGTTGCATTGGCCTTGC 60.389 55.000 20.38 20.38 40.13 4.01
5020 5855 0.828762 TCTGTTGCATTGGCCTTGCT 60.829 50.000 25.16 0.00 40.77 3.91
5021 5856 0.669318 CTGTTGCATTGGCCTTGCTG 60.669 55.000 25.16 10.43 40.77 4.41
5022 5857 1.114119 TGTTGCATTGGCCTTGCTGA 61.114 50.000 25.16 14.82 40.77 4.26
5023 5858 0.668401 GTTGCATTGGCCTTGCTGAC 60.668 55.000 25.16 20.20 40.77 3.51
5024 5859 1.114119 TTGCATTGGCCTTGCTGACA 61.114 50.000 25.16 8.36 40.77 3.58
5025 5860 0.901114 TGCATTGGCCTTGCTGACAT 60.901 50.000 25.16 0.00 40.77 3.06
5026 5861 0.459585 GCATTGGCCTTGCTGACATG 60.460 55.000 20.04 0.00 37.14 3.21
5027 5862 0.174845 CATTGGCCTTGCTGACATGG 59.825 55.000 3.32 0.00 42.66 3.66
5028 5863 0.251922 ATTGGCCTTGCTGACATGGT 60.252 50.000 3.32 0.00 41.96 3.55
5029 5864 0.895100 TTGGCCTTGCTGACATGGTC 60.895 55.000 3.32 0.00 44.11 4.02
5030 5865 2.401766 GGCCTTGCTGACATGGTCG 61.402 63.158 0.00 0.00 41.96 4.79
5031 5866 2.401766 GCCTTGCTGACATGGTCGG 61.402 63.158 0.00 0.84 41.96 4.79
5042 5877 3.230284 TGGTCGGCCAGATCATCC 58.770 61.111 3.51 0.00 40.46 3.51
5043 5878 1.383109 TGGTCGGCCAGATCATCCT 60.383 57.895 3.51 0.00 40.46 3.24
5044 5879 0.982852 TGGTCGGCCAGATCATCCTT 60.983 55.000 3.51 0.00 40.46 3.36
5045 5880 0.533755 GGTCGGCCAGATCATCCTTG 60.534 60.000 0.00 0.00 34.09 3.61
5046 5881 0.179000 GTCGGCCAGATCATCCTTGT 59.821 55.000 2.24 0.00 0.00 3.16
5047 5882 0.178767 TCGGCCAGATCATCCTTGTG 59.821 55.000 2.24 0.00 0.00 3.33
5048 5883 0.178767 CGGCCAGATCATCCTTGTGA 59.821 55.000 2.24 0.00 0.00 3.58
5049 5884 1.673168 GGCCAGATCATCCTTGTGAC 58.327 55.000 0.00 0.00 0.00 3.67
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
90 92 2.065993 AACGACGAGTGGTGATGAAG 57.934 50.000 0.00 0.00 0.00 3.02
137 140 7.774625 TGAAACAAGGTTCATCTATCATATGCA 59.225 33.333 0.00 0.00 32.56 3.96
139 142 9.334947 ACTGAAACAAGGTTCATCTATCATATG 57.665 33.333 0.37 0.00 36.92 1.78
160 189 1.247567 GCCCTTTTAGCAGCACTGAA 58.752 50.000 0.81 0.00 0.00 3.02
193 222 9.671279 TTCCATATATGTAATTCATGCGATCTT 57.329 29.630 11.73 0.00 37.91 2.40
252 281 2.751816 GCTTCCTTGTGGTTAACCTGGT 60.752 50.000 24.78 0.00 36.82 4.00
330 366 3.624861 AGAGAGTTGTGCAAGTTGAGTTG 59.375 43.478 7.16 0.00 0.00 3.16
349 413 6.261603 TGAGCTAATGCCAATTATCAACAGAG 59.738 38.462 0.00 0.00 40.80 3.35
391 455 3.728845 CACATGGTAGTACCTGCATACC 58.271 50.000 20.07 6.51 39.58 2.73
399 898 8.899771 ACTATTTTAATTGCACATGGTAGTACC 58.100 33.333 12.80 12.80 39.22 3.34
403 902 9.853555 TTTGACTATTTTAATTGCACATGGTAG 57.146 29.630 0.00 0.00 0.00 3.18
420 919 4.740934 GCGTGGATCTAGGCTTTGACTATT 60.741 45.833 15.58 0.00 0.00 1.73
422 921 2.100916 GCGTGGATCTAGGCTTTGACTA 59.899 50.000 15.58 0.00 0.00 2.59
423 922 1.134670 GCGTGGATCTAGGCTTTGACT 60.135 52.381 15.58 0.00 0.00 3.41
432 931 6.038161 TGGTTCAATTAATTGCGTGGATCTAG 59.962 38.462 21.15 0.00 37.68 2.43
449 948 1.234821 ACGACGTGCATTGGTTCAAT 58.765 45.000 0.00 0.00 34.04 2.57
583 1084 8.635765 TTCTATTCTCATATATTTTGCCCACC 57.364 34.615 0.00 0.00 0.00 4.61
976 1513 6.237622 CGATTGGTTTGTGCACAATAATGATG 60.238 38.462 31.48 16.24 35.17 3.07
978 1515 5.048434 TCGATTGGTTTGTGCACAATAATGA 60.048 36.000 31.48 23.00 35.17 2.57
1053 1593 1.073897 ACCAACCTTGAGGAGCAGC 59.926 57.895 3.59 0.00 38.94 5.25
1083 1623 1.185618 TCTGCAGCTTGTACTCCCGT 61.186 55.000 9.47 0.00 0.00 5.28
1084 1624 0.737715 GTCTGCAGCTTGTACTCCCG 60.738 60.000 9.47 0.00 0.00 5.14
1085 1625 0.737715 CGTCTGCAGCTTGTACTCCC 60.738 60.000 9.47 0.00 0.00 4.30
1116 1656 6.855914 GCTCTCTCTTAAGATACTCAACATCG 59.144 42.308 5.44 0.00 0.00 3.84
1204 1744 1.719063 TTGGCCCAGAGCTTGACCTT 61.719 55.000 0.00 0.00 43.05 3.50
1229 1769 4.881273 CCATTATGAACGACAAATCCCTGA 59.119 41.667 0.00 0.00 0.00 3.86
1230 1770 4.881273 TCCATTATGAACGACAAATCCCTG 59.119 41.667 0.00 0.00 0.00 4.45
1231 1771 5.110814 TCCATTATGAACGACAAATCCCT 57.889 39.130 0.00 0.00 0.00 4.20
1232 1772 4.275936 CCTCCATTATGAACGACAAATCCC 59.724 45.833 0.00 0.00 0.00 3.85
1233 1773 5.007724 GTCCTCCATTATGAACGACAAATCC 59.992 44.000 0.00 0.00 0.00 3.01
1234 1774 5.584649 TGTCCTCCATTATGAACGACAAATC 59.415 40.000 0.00 0.00 0.00 2.17
1235 1775 5.496556 TGTCCTCCATTATGAACGACAAAT 58.503 37.500 0.00 0.00 0.00 2.32
1236 1776 4.900684 TGTCCTCCATTATGAACGACAAA 58.099 39.130 0.00 0.00 0.00 2.83
1237 1777 4.545208 TGTCCTCCATTATGAACGACAA 57.455 40.909 0.00 0.00 0.00 3.18
1238 1778 4.161377 TGATGTCCTCCATTATGAACGACA 59.839 41.667 9.41 9.41 32.56 4.35
1239 1779 4.693283 TGATGTCCTCCATTATGAACGAC 58.307 43.478 0.00 0.00 32.56 4.34
1240 1780 5.541845 GATGATGTCCTCCATTATGAACGA 58.458 41.667 0.00 0.00 30.43 3.85
1241 1781 4.386954 CGATGATGTCCTCCATTATGAACG 59.613 45.833 0.00 0.00 30.43 3.95
1242 1782 5.406780 GTCGATGATGTCCTCCATTATGAAC 59.593 44.000 0.00 0.00 30.43 3.18
1243 1783 5.070313 TGTCGATGATGTCCTCCATTATGAA 59.930 40.000 0.00 0.00 30.43 2.57
1244 1784 4.588528 TGTCGATGATGTCCTCCATTATGA 59.411 41.667 0.00 0.00 30.43 2.15
1245 1785 4.886579 TGTCGATGATGTCCTCCATTATG 58.113 43.478 0.00 0.00 30.43 1.90
1246 1786 5.070981 ACTTGTCGATGATGTCCTCCATTAT 59.929 40.000 0.00 0.00 32.79 1.28
1247 1787 4.405680 ACTTGTCGATGATGTCCTCCATTA 59.594 41.667 0.00 0.00 32.56 1.90
1248 1788 3.198635 ACTTGTCGATGATGTCCTCCATT 59.801 43.478 0.00 0.00 32.56 3.16
1249 1789 2.768527 ACTTGTCGATGATGTCCTCCAT 59.231 45.455 0.00 0.00 36.13 3.41
1250 1790 2.179427 ACTTGTCGATGATGTCCTCCA 58.821 47.619 0.00 0.00 0.00 3.86
1251 1791 2.969628 ACTTGTCGATGATGTCCTCC 57.030 50.000 0.00 0.00 0.00 4.30
1252 1792 3.118956 AGGAACTTGTCGATGATGTCCTC 60.119 47.826 4.59 0.00 27.25 3.71
1253 1793 2.834549 AGGAACTTGTCGATGATGTCCT 59.165 45.455 4.59 4.59 27.25 3.85
1254 1794 2.932614 CAGGAACTTGTCGATGATGTCC 59.067 50.000 0.00 0.00 34.60 4.02
1255 1795 2.932614 CCAGGAACTTGTCGATGATGTC 59.067 50.000 0.00 0.00 34.60 3.06
1256 1796 2.303022 ACCAGGAACTTGTCGATGATGT 59.697 45.455 0.00 0.00 34.60 3.06
1257 1797 2.674852 CACCAGGAACTTGTCGATGATG 59.325 50.000 0.00 0.00 34.60 3.07
1258 1798 2.936993 GCACCAGGAACTTGTCGATGAT 60.937 50.000 0.00 0.00 34.60 2.45
1259 1799 1.608025 GCACCAGGAACTTGTCGATGA 60.608 52.381 0.00 0.00 34.60 2.92
1260 1800 0.798776 GCACCAGGAACTTGTCGATG 59.201 55.000 0.00 0.00 34.60 3.84
1261 1801 0.670546 CGCACCAGGAACTTGTCGAT 60.671 55.000 0.00 0.00 34.60 3.59
1262 1802 1.300620 CGCACCAGGAACTTGTCGA 60.301 57.895 0.00 0.00 34.60 4.20
1263 1803 2.954753 GCGCACCAGGAACTTGTCG 61.955 63.158 0.30 0.00 34.60 4.35
1264 1804 2.946762 GCGCACCAGGAACTTGTC 59.053 61.111 0.30 0.00 34.60 3.18
1265 1805 2.972505 CGCGCACCAGGAACTTGT 60.973 61.111 8.75 0.00 34.60 3.16
1266 1806 2.542907 AACGCGCACCAGGAACTTG 61.543 57.895 5.73 0.00 34.60 3.16
1267 1807 2.203153 AACGCGCACCAGGAACTT 60.203 55.556 5.73 0.00 34.60 2.66
1268 1808 2.972505 CAACGCGCACCAGGAACT 60.973 61.111 5.73 0.00 43.88 3.01
1269 1809 2.954753 CTCAACGCGCACCAGGAAC 61.955 63.158 5.73 0.00 0.00 3.62
1270 1810 2.664851 CTCAACGCGCACCAGGAA 60.665 61.111 5.73 0.00 0.00 3.36
1271 1811 4.680237 CCTCAACGCGCACCAGGA 62.680 66.667 5.73 0.00 0.00 3.86
1273 1813 4.680237 TCCCTCAACGCGCACCAG 62.680 66.667 5.73 0.00 0.00 4.00
1274 1814 4.680237 CTCCCTCAACGCGCACCA 62.680 66.667 5.73 0.00 0.00 4.17
1278 1818 4.742201 TCAGCTCCCTCAACGCGC 62.742 66.667 5.73 0.00 0.00 6.86
1279 1819 2.507992 CTCAGCTCCCTCAACGCG 60.508 66.667 3.53 3.53 0.00 6.01
1280 1820 2.817396 GCTCAGCTCCCTCAACGC 60.817 66.667 0.00 0.00 0.00 4.84
1281 1821 2.125350 GGCTCAGCTCCCTCAACG 60.125 66.667 0.00 0.00 0.00 4.10
1282 1822 1.078567 CAGGCTCAGCTCCCTCAAC 60.079 63.158 0.00 0.00 0.00 3.18
1283 1823 2.964310 GCAGGCTCAGCTCCCTCAA 61.964 63.158 0.00 0.00 0.00 3.02
1284 1824 3.397439 GCAGGCTCAGCTCCCTCA 61.397 66.667 0.00 0.00 0.00 3.86
1285 1825 4.173924 GGCAGGCTCAGCTCCCTC 62.174 72.222 0.00 0.00 0.00 4.30
1287 1827 3.771110 GATGGCAGGCTCAGCTCCC 62.771 68.421 0.00 0.00 0.00 4.30
1288 1828 2.203181 GATGGCAGGCTCAGCTCC 60.203 66.667 0.00 0.00 0.00 4.70
1289 1829 1.077930 TTGATGGCAGGCTCAGCTC 60.078 57.895 0.00 0.00 0.00 4.09
1290 1830 1.077644 CTTGATGGCAGGCTCAGCT 60.078 57.895 0.00 0.00 0.00 4.24
1291 1831 2.772691 GCTTGATGGCAGGCTCAGC 61.773 63.158 0.00 0.00 43.17 4.26
1292 1832 2.119655 GGCTTGATGGCAGGCTCAG 61.120 63.158 0.00 0.00 45.53 3.35
1293 1833 2.044650 GGCTTGATGGCAGGCTCA 60.045 61.111 0.00 0.00 45.53 4.26
1294 1834 2.044650 TGGCTTGATGGCAGGCTC 60.045 61.111 0.00 0.00 46.76 4.70
1300 1840 1.734117 GTTTGCGTGGCTTGATGGC 60.734 57.895 0.00 0.00 42.18 4.40
1301 1841 0.109597 GAGTTTGCGTGGCTTGATGG 60.110 55.000 0.00 0.00 0.00 3.51
1302 1842 0.592637 TGAGTTTGCGTGGCTTGATG 59.407 50.000 0.00 0.00 0.00 3.07
1303 1843 1.267806 CTTGAGTTTGCGTGGCTTGAT 59.732 47.619 0.00 0.00 0.00 2.57
1304 1844 0.662619 CTTGAGTTTGCGTGGCTTGA 59.337 50.000 0.00 0.00 0.00 3.02
1305 1845 0.318107 CCTTGAGTTTGCGTGGCTTG 60.318 55.000 0.00 0.00 0.00 4.01
1306 1846 0.465460 TCCTTGAGTTTGCGTGGCTT 60.465 50.000 0.00 0.00 0.00 4.35
1307 1847 0.250901 ATCCTTGAGTTTGCGTGGCT 60.251 50.000 0.00 0.00 0.00 4.75
1308 1848 0.598065 AATCCTTGAGTTTGCGTGGC 59.402 50.000 0.00 0.00 0.00 5.01
1309 1849 2.034558 ACAAATCCTTGAGTTTGCGTGG 59.965 45.455 0.00 0.00 38.54 4.94
1310 1850 3.300009 GACAAATCCTTGAGTTTGCGTG 58.700 45.455 0.00 0.00 38.54 5.34
1311 1851 2.032030 CGACAAATCCTTGAGTTTGCGT 60.032 45.455 0.00 0.00 38.54 5.24
1312 1852 2.032030 ACGACAAATCCTTGAGTTTGCG 60.032 45.455 0.00 0.00 38.54 4.85
1313 1853 3.626028 ACGACAAATCCTTGAGTTTGC 57.374 42.857 0.00 0.00 38.54 3.68
1314 1854 5.168526 TGAACGACAAATCCTTGAGTTTG 57.831 39.130 0.00 0.00 40.29 2.93
1315 1855 7.504924 TTATGAACGACAAATCCTTGAGTTT 57.495 32.000 0.00 0.00 37.20 2.66
1316 1856 7.362056 CCATTATGAACGACAAATCCTTGAGTT 60.362 37.037 0.00 0.00 38.57 3.01
1317 1857 6.094048 CCATTATGAACGACAAATCCTTGAGT 59.906 38.462 0.00 0.00 36.33 3.41
1318 1858 6.316140 TCCATTATGAACGACAAATCCTTGAG 59.684 38.462 0.00 0.00 36.33 3.02
1322 1862 5.104527 TCCTCCATTATGAACGACAAATCCT 60.105 40.000 0.00 0.00 0.00 3.24
1326 1866 4.900684 TGTCCTCCATTATGAACGACAAA 58.099 39.130 0.00 0.00 0.00 2.83
1374 1914 3.397439 GCAGGCTCAGCTCCCTCA 61.397 66.667 0.00 0.00 0.00 3.86
1599 2139 3.674682 CGAGCTCTTTCTGGTCCTTGTAG 60.675 52.174 12.85 0.00 0.00 2.74
1751 2291 5.584649 TGCGCTTTAAGCTTATCATACACTT 59.415 36.000 15.29 0.00 39.60 3.16
1813 2353 4.848562 TGAGAAGTTTCTTCACGCTAGA 57.151 40.909 11.27 0.00 37.73 2.43
1863 2403 4.451629 TTCATCCAACTCCGAGTACTTC 57.548 45.455 0.26 0.00 0.00 3.01
2412 3021 1.134280 AGAGACATGTATGCACCAGCC 60.134 52.381 0.00 0.00 41.13 4.85
2551 3171 9.367160 AGGGGATATAACAAATTAGTGGAAATG 57.633 33.333 0.00 0.00 0.00 2.32
2576 3197 4.319249 TCGCCATCGATAACGCAG 57.681 55.556 12.91 5.87 40.21 5.18
2585 3206 2.154854 AATACCTGTCATCGCCATCG 57.845 50.000 0.00 0.00 0.00 3.84
2703 3325 3.945981 TGTGGCAACTTCGAGTATACA 57.054 42.857 5.50 0.00 37.61 2.29
2797 3419 1.684983 GCCATTCTATTGCAGCACCAT 59.315 47.619 0.00 0.00 0.00 3.55
2948 3570 7.236432 TCATTTTCTTCATCCCCAAAACCAATA 59.764 33.333 0.00 0.00 0.00 1.90
3113 3735 2.618709 CTCATGGATAAAACCTTCGGCC 59.381 50.000 0.00 0.00 0.00 6.13
3204 3826 3.851128 GGCCTCCTCTACCGGCAC 61.851 72.222 0.00 0.00 45.53 5.01
3551 4184 6.826231 TCAAGTGAACTAACTTTCCAACATGA 59.174 34.615 0.00 0.00 38.34 3.07
3675 4311 4.177026 CCAATACTCTCTGGAAGTTCACG 58.823 47.826 5.01 0.00 34.35 4.35
3917 4559 3.614616 GGATCTTGCTCACTTTGTCTACG 59.385 47.826 0.00 0.00 0.00 3.51
3922 4564 3.817647 GACTTGGATCTTGCTCACTTTGT 59.182 43.478 0.00 0.00 0.00 2.83
3998 4647 1.153229 GAGGGCATACCGTTCCCAC 60.153 63.158 0.00 0.00 46.96 4.61
4030 4679 5.187186 ACGGGTCATCTAGTGTGTAGAAAAT 59.813 40.000 0.00 0.00 0.00 1.82
4076 4725 4.937620 TCTTACAATACTTGGCTTGCTCTG 59.062 41.667 0.00 0.00 34.12 3.35
4078 4727 4.938226 ACTCTTACAATACTTGGCTTGCTC 59.062 41.667 0.00 0.00 34.12 4.26
4123 4772 5.707242 TCGTGAACAGAGACAGTAATCTT 57.293 39.130 0.00 0.00 0.00 2.40
4143 4821 4.566004 TGTTCCAGGAGAAACAGTAATCG 58.434 43.478 0.00 0.00 35.85 3.34
4257 4935 0.461516 CATCGAGCACTCACCAGCAT 60.462 55.000 0.00 0.00 0.00 3.79
4269 4947 5.743872 ACTTTCTTTGTTTCAAACATCGAGC 59.256 36.000 3.17 0.00 41.79 5.03
4332 5010 9.081997 GTTGTTCCTCATCGATCTATTGATATC 57.918 37.037 0.00 0.00 32.19 1.63
4337 5015 6.045318 ACTGTTGTTCCTCATCGATCTATTG 58.955 40.000 0.00 0.00 0.00 1.90
4405 5083 9.927668 TGTTCTCTTTTTCAACTTCTTTTCAAT 57.072 25.926 0.00 0.00 0.00 2.57
4434 5112 6.020678 GTGTTTTAGCAACAACAGTGAACATC 60.021 38.462 0.00 0.00 33.55 3.06
4589 5424 1.464997 GGAAACTGAAGGCGCTAACAG 59.535 52.381 19.93 19.93 36.58 3.16
4617 5452 4.527509 CAGTCTCTTAGGCTGTTGAAGA 57.472 45.455 0.00 0.00 42.73 2.87
4706 5541 8.763984 TGTGGTTTATACTTAACAGGGAAAAA 57.236 30.769 0.00 0.00 0.00 1.94
4707 5542 8.631797 GTTGTGGTTTATACTTAACAGGGAAAA 58.368 33.333 0.00 0.00 0.00 2.29
4708 5543 8.000127 AGTTGTGGTTTATACTTAACAGGGAAA 59.000 33.333 0.00 0.00 0.00 3.13
4709 5544 7.519927 AGTTGTGGTTTATACTTAACAGGGAA 58.480 34.615 0.00 0.00 0.00 3.97
4710 5545 7.081857 AGTTGTGGTTTATACTTAACAGGGA 57.918 36.000 0.00 0.00 0.00 4.20
4711 5546 7.229907 ACAAGTTGTGGTTTATACTTAACAGGG 59.770 37.037 7.96 0.00 30.19 4.45
4712 5547 8.073768 CACAAGTTGTGGTTTATACTTAACAGG 58.926 37.037 25.45 0.00 44.27 4.00
4729 5564 3.932545 TGTGTTTTCTGCACAAGTTGT 57.067 38.095 1.64 1.64 42.96 3.32
4735 5570 5.343593 CGTTAAAGTTTGTGTTTTCTGCACA 59.656 36.000 0.00 0.00 44.05 4.57
4736 5571 5.569823 TCGTTAAAGTTTGTGTTTTCTGCAC 59.430 36.000 0.00 0.00 37.37 4.57
4737 5572 5.700846 TCGTTAAAGTTTGTGTTTTCTGCA 58.299 33.333 0.00 0.00 0.00 4.41
4738 5573 6.237463 CCTTCGTTAAAGTTTGTGTTTTCTGC 60.237 38.462 0.00 0.00 32.69 4.26
4739 5574 6.252655 CCCTTCGTTAAAGTTTGTGTTTTCTG 59.747 38.462 0.00 0.00 32.69 3.02
4740 5575 6.071784 ACCCTTCGTTAAAGTTTGTGTTTTCT 60.072 34.615 0.00 0.00 32.69 2.52
4741 5576 6.094719 ACCCTTCGTTAAAGTTTGTGTTTTC 58.905 36.000 0.00 0.00 32.69 2.29
4742 5577 6.028146 ACCCTTCGTTAAAGTTTGTGTTTT 57.972 33.333 0.00 0.00 32.69 2.43
4743 5578 5.648178 ACCCTTCGTTAAAGTTTGTGTTT 57.352 34.783 0.00 0.00 32.69 2.83
4744 5579 5.882000 AGTACCCTTCGTTAAAGTTTGTGTT 59.118 36.000 0.00 0.00 32.69 3.32
4745 5580 5.430886 AGTACCCTTCGTTAAAGTTTGTGT 58.569 37.500 0.00 0.00 32.69 3.72
4746 5581 5.996669 AGTACCCTTCGTTAAAGTTTGTG 57.003 39.130 0.00 0.00 32.69 3.33
4747 5582 6.598850 TGAAAGTACCCTTCGTTAAAGTTTGT 59.401 34.615 0.00 0.00 32.69 2.83
4748 5583 6.908820 GTGAAAGTACCCTTCGTTAAAGTTTG 59.091 38.462 0.00 0.00 32.69 2.93
4749 5584 6.598850 TGTGAAAGTACCCTTCGTTAAAGTTT 59.401 34.615 0.00 0.00 32.69 2.66
4750 5585 6.037500 GTGTGAAAGTACCCTTCGTTAAAGTT 59.962 38.462 0.00 0.00 32.69 2.66
4751 5586 5.525012 GTGTGAAAGTACCCTTCGTTAAAGT 59.475 40.000 0.00 0.00 32.69 2.66
4752 5587 5.756833 AGTGTGAAAGTACCCTTCGTTAAAG 59.243 40.000 0.00 0.00 34.52 1.85
4753 5588 5.673514 AGTGTGAAAGTACCCTTCGTTAAA 58.326 37.500 0.00 0.00 0.00 1.52
4754 5589 5.280654 AGTGTGAAAGTACCCTTCGTTAA 57.719 39.130 0.00 0.00 0.00 2.01
4755 5590 4.942761 AGTGTGAAAGTACCCTTCGTTA 57.057 40.909 0.00 0.00 0.00 3.18
4756 5591 3.832615 AGTGTGAAAGTACCCTTCGTT 57.167 42.857 0.00 0.00 0.00 3.85
4757 5592 3.118519 ACAAGTGTGAAAGTACCCTTCGT 60.119 43.478 0.00 0.00 0.00 3.85
4758 5593 3.463944 ACAAGTGTGAAAGTACCCTTCG 58.536 45.455 0.00 0.00 0.00 3.79
4759 5594 4.879545 TCAACAAGTGTGAAAGTACCCTTC 59.120 41.667 0.00 0.00 0.00 3.46
4760 5595 4.850680 TCAACAAGTGTGAAAGTACCCTT 58.149 39.130 0.00 0.00 0.00 3.95
4761 5596 4.451900 CTCAACAAGTGTGAAAGTACCCT 58.548 43.478 0.00 0.00 0.00 4.34
4762 5597 3.564225 CCTCAACAAGTGTGAAAGTACCC 59.436 47.826 0.00 0.00 0.00 3.69
4763 5598 4.196971 ACCTCAACAAGTGTGAAAGTACC 58.803 43.478 0.00 0.00 0.00 3.34
4764 5599 5.569413 CAACCTCAACAAGTGTGAAAGTAC 58.431 41.667 0.00 0.00 0.00 2.73
4765 5600 4.095782 GCAACCTCAACAAGTGTGAAAGTA 59.904 41.667 0.00 0.00 0.00 2.24
4766 5601 3.119495 GCAACCTCAACAAGTGTGAAAGT 60.119 43.478 0.00 0.00 0.00 2.66
4767 5602 3.119531 TGCAACCTCAACAAGTGTGAAAG 60.120 43.478 0.00 0.00 0.00 2.62
4768 5603 2.822561 TGCAACCTCAACAAGTGTGAAA 59.177 40.909 0.00 0.00 0.00 2.69
4769 5604 2.163412 GTGCAACCTCAACAAGTGTGAA 59.837 45.455 0.00 0.00 0.00 3.18
4770 5605 1.742831 GTGCAACCTCAACAAGTGTGA 59.257 47.619 0.00 0.00 0.00 3.58
4771 5606 1.472082 TGTGCAACCTCAACAAGTGTG 59.528 47.619 0.00 0.00 34.36 3.82
4772 5607 1.472480 GTGTGCAACCTCAACAAGTGT 59.528 47.619 0.00 0.00 34.36 3.55
4773 5608 1.531677 CGTGTGCAACCTCAACAAGTG 60.532 52.381 0.00 0.00 34.36 3.16
4774 5609 0.732571 CGTGTGCAACCTCAACAAGT 59.267 50.000 0.00 0.00 34.36 3.16
4775 5610 0.029300 CCGTGTGCAACCTCAACAAG 59.971 55.000 0.00 0.00 34.36 3.16
4776 5611 1.380403 CCCGTGTGCAACCTCAACAA 61.380 55.000 0.00 0.00 34.36 2.83
4777 5612 1.821759 CCCGTGTGCAACCTCAACA 60.822 57.895 0.00 0.00 34.36 3.33
4778 5613 1.782028 GACCCGTGTGCAACCTCAAC 61.782 60.000 0.00 0.00 34.36 3.18
4779 5614 1.525077 GACCCGTGTGCAACCTCAA 60.525 57.895 0.00 0.00 34.36 3.02
4780 5615 2.050836 ATGACCCGTGTGCAACCTCA 62.051 55.000 0.00 0.00 34.36 3.86
4781 5616 1.298859 GATGACCCGTGTGCAACCTC 61.299 60.000 0.00 0.00 34.36 3.85
4782 5617 1.302511 GATGACCCGTGTGCAACCT 60.303 57.895 0.00 0.00 34.36 3.50
4783 5618 1.599518 TGATGACCCGTGTGCAACC 60.600 57.895 0.00 0.00 34.36 3.77
4784 5619 1.163420 TGTGATGACCCGTGTGCAAC 61.163 55.000 0.00 0.00 37.35 4.17
4785 5620 1.147153 TGTGATGACCCGTGTGCAA 59.853 52.632 0.00 0.00 0.00 4.08
4786 5621 1.596752 GTGTGATGACCCGTGTGCA 60.597 57.895 0.00 0.00 0.00 4.57
4787 5622 2.325082 GGTGTGATGACCCGTGTGC 61.325 63.158 0.00 0.00 0.00 4.57
4788 5623 2.027073 CGGTGTGATGACCCGTGTG 61.027 63.158 4.51 0.00 37.00 3.82
4789 5624 2.342279 CGGTGTGATGACCCGTGT 59.658 61.111 4.51 0.00 37.00 4.49
4792 5627 0.391130 ATGAACGGTGTGATGACCCG 60.391 55.000 9.88 9.88 46.93 5.28
4793 5628 1.086696 CATGAACGGTGTGATGACCC 58.913 55.000 0.00 0.00 31.57 4.46
4794 5629 1.732259 GACATGAACGGTGTGATGACC 59.268 52.381 0.00 0.00 0.00 4.02
4795 5630 2.413112 CAGACATGAACGGTGTGATGAC 59.587 50.000 0.00 0.00 31.71 3.06
4796 5631 2.687370 CAGACATGAACGGTGTGATGA 58.313 47.619 0.00 0.00 31.71 2.92
4797 5632 1.129251 GCAGACATGAACGGTGTGATG 59.871 52.381 0.00 0.00 31.71 3.07
4798 5633 1.270785 TGCAGACATGAACGGTGTGAT 60.271 47.619 0.00 0.00 31.71 3.06
4799 5634 0.105778 TGCAGACATGAACGGTGTGA 59.894 50.000 0.00 0.00 31.71 3.58
4800 5635 0.943673 TTGCAGACATGAACGGTGTG 59.056 50.000 0.00 0.00 33.09 3.82
4801 5636 0.944386 GTTGCAGACATGAACGGTGT 59.056 50.000 0.00 0.00 0.00 4.16
4802 5637 0.943673 TGTTGCAGACATGAACGGTG 59.056 50.000 0.00 0.00 32.00 4.94
4803 5638 3.395210 TGTTGCAGACATGAACGGT 57.605 47.368 0.00 0.00 32.00 4.83
4811 5646 3.565482 GGTCTTCTTGAATGTTGCAGACA 59.435 43.478 4.56 4.56 43.71 3.41
4812 5647 3.565482 TGGTCTTCTTGAATGTTGCAGAC 59.435 43.478 0.00 0.00 0.00 3.51
4813 5648 3.819368 TGGTCTTCTTGAATGTTGCAGA 58.181 40.909 0.00 0.00 0.00 4.26
4814 5649 4.572985 TTGGTCTTCTTGAATGTTGCAG 57.427 40.909 0.00 0.00 0.00 4.41
4815 5650 4.644234 TCTTTGGTCTTCTTGAATGTTGCA 59.356 37.500 0.00 0.00 0.00 4.08
4816 5651 5.186996 TCTTTGGTCTTCTTGAATGTTGC 57.813 39.130 0.00 0.00 0.00 4.17
4817 5652 6.563422 TGTTCTTTGGTCTTCTTGAATGTTG 58.437 36.000 0.00 0.00 0.00 3.33
4818 5653 6.773976 TGTTCTTTGGTCTTCTTGAATGTT 57.226 33.333 0.00 0.00 0.00 2.71
4819 5654 6.773976 TTGTTCTTTGGTCTTCTTGAATGT 57.226 33.333 0.00 0.00 0.00 2.71
4820 5655 6.643770 CCATTGTTCTTTGGTCTTCTTGAATG 59.356 38.462 0.00 0.00 0.00 2.67
4821 5656 6.239402 CCCATTGTTCTTTGGTCTTCTTGAAT 60.239 38.462 0.00 0.00 0.00 2.57
4822 5657 5.068987 CCCATTGTTCTTTGGTCTTCTTGAA 59.931 40.000 0.00 0.00 0.00 2.69
4823 5658 4.584325 CCCATTGTTCTTTGGTCTTCTTGA 59.416 41.667 0.00 0.00 0.00 3.02
4824 5659 4.584325 TCCCATTGTTCTTTGGTCTTCTTG 59.416 41.667 0.00 0.00 0.00 3.02
4825 5660 4.803452 TCCCATTGTTCTTTGGTCTTCTT 58.197 39.130 0.00 0.00 0.00 2.52
4826 5661 4.453480 TCCCATTGTTCTTTGGTCTTCT 57.547 40.909 0.00 0.00 0.00 2.85
4827 5662 5.011023 ACATTCCCATTGTTCTTTGGTCTTC 59.989 40.000 0.00 0.00 0.00 2.87
4828 5663 4.901250 ACATTCCCATTGTTCTTTGGTCTT 59.099 37.500 0.00 0.00 0.00 3.01
4829 5664 4.482990 ACATTCCCATTGTTCTTTGGTCT 58.517 39.130 0.00 0.00 0.00 3.85
4830 5665 4.280677 TGACATTCCCATTGTTCTTTGGTC 59.719 41.667 0.00 0.00 0.00 4.02
4831 5666 4.222336 TGACATTCCCATTGTTCTTTGGT 58.778 39.130 0.00 0.00 0.00 3.67
4832 5667 4.870123 TGACATTCCCATTGTTCTTTGG 57.130 40.909 0.00 0.00 0.00 3.28
4833 5668 6.047870 TGTTTGACATTCCCATTGTTCTTTG 58.952 36.000 0.00 0.00 0.00 2.77
4834 5669 6.232581 TGTTTGACATTCCCATTGTTCTTT 57.767 33.333 0.00 0.00 0.00 2.52
4835 5670 5.867903 TGTTTGACATTCCCATTGTTCTT 57.132 34.783 0.00 0.00 0.00 2.52
4836 5671 6.423776 AATGTTTGACATTCCCATTGTTCT 57.576 33.333 0.66 0.00 44.91 3.01
4848 5683 6.701400 GCTGGTCTTGTTAAAATGTTTGACAT 59.299 34.615 0.00 0.00 41.31 3.06
4849 5684 6.039616 GCTGGTCTTGTTAAAATGTTTGACA 58.960 36.000 0.00 0.00 0.00 3.58
4850 5685 6.039616 TGCTGGTCTTGTTAAAATGTTTGAC 58.960 36.000 0.00 0.00 0.00 3.18
4851 5686 6.214191 TGCTGGTCTTGTTAAAATGTTTGA 57.786 33.333 0.00 0.00 0.00 2.69
4852 5687 6.534793 ACTTGCTGGTCTTGTTAAAATGTTTG 59.465 34.615 0.00 0.00 0.00 2.93
4853 5688 6.534793 CACTTGCTGGTCTTGTTAAAATGTTT 59.465 34.615 0.00 0.00 0.00 2.83
4854 5689 6.042143 CACTTGCTGGTCTTGTTAAAATGTT 58.958 36.000 0.00 0.00 0.00 2.71
4855 5690 5.359576 TCACTTGCTGGTCTTGTTAAAATGT 59.640 36.000 0.00 0.00 0.00 2.71
4856 5691 5.830912 TCACTTGCTGGTCTTGTTAAAATG 58.169 37.500 0.00 0.00 0.00 2.32
4857 5692 5.827797 TCTCACTTGCTGGTCTTGTTAAAAT 59.172 36.000 0.00 0.00 0.00 1.82
4858 5693 5.065988 GTCTCACTTGCTGGTCTTGTTAAAA 59.934 40.000 0.00 0.00 0.00 1.52
4859 5694 4.574828 GTCTCACTTGCTGGTCTTGTTAAA 59.425 41.667 0.00 0.00 0.00 1.52
4860 5695 4.127171 GTCTCACTTGCTGGTCTTGTTAA 58.873 43.478 0.00 0.00 0.00 2.01
4861 5696 3.133901 TGTCTCACTTGCTGGTCTTGTTA 59.866 43.478 0.00 0.00 0.00 2.41
4862 5697 2.092968 TGTCTCACTTGCTGGTCTTGTT 60.093 45.455 0.00 0.00 0.00 2.83
4863 5698 1.486310 TGTCTCACTTGCTGGTCTTGT 59.514 47.619 0.00 0.00 0.00 3.16
4864 5699 2.141517 CTGTCTCACTTGCTGGTCTTG 58.858 52.381 0.00 0.00 0.00 3.02
4865 5700 1.071385 CCTGTCTCACTTGCTGGTCTT 59.929 52.381 0.00 0.00 0.00 3.01
4866 5701 0.683973 CCTGTCTCACTTGCTGGTCT 59.316 55.000 0.00 0.00 0.00 3.85
4867 5702 0.681733 TCCTGTCTCACTTGCTGGTC 59.318 55.000 0.00 0.00 0.00 4.02
4868 5703 1.131638 TTCCTGTCTCACTTGCTGGT 58.868 50.000 0.00 0.00 0.00 4.00
4869 5704 2.082231 CATTCCTGTCTCACTTGCTGG 58.918 52.381 0.00 0.00 0.00 4.85
4870 5705 2.740981 GTCATTCCTGTCTCACTTGCTG 59.259 50.000 0.00 0.00 0.00 4.41
4871 5706 2.289945 GGTCATTCCTGTCTCACTTGCT 60.290 50.000 0.00 0.00 0.00 3.91
4872 5707 2.079925 GGTCATTCCTGTCTCACTTGC 58.920 52.381 0.00 0.00 0.00 4.01
4873 5708 2.029020 TCGGTCATTCCTGTCTCACTTG 60.029 50.000 0.00 0.00 0.00 3.16
4874 5709 2.232452 CTCGGTCATTCCTGTCTCACTT 59.768 50.000 0.00 0.00 0.00 3.16
4875 5710 1.821753 CTCGGTCATTCCTGTCTCACT 59.178 52.381 0.00 0.00 0.00 3.41
4876 5711 1.819288 TCTCGGTCATTCCTGTCTCAC 59.181 52.381 0.00 0.00 0.00 3.51
4877 5712 2.215942 TCTCGGTCATTCCTGTCTCA 57.784 50.000 0.00 0.00 0.00 3.27
4878 5713 2.737039 GCTTCTCGGTCATTCCTGTCTC 60.737 54.545 0.00 0.00 0.00 3.36
4879 5714 1.205893 GCTTCTCGGTCATTCCTGTCT 59.794 52.381 0.00 0.00 0.00 3.41
4880 5715 1.646189 GCTTCTCGGTCATTCCTGTC 58.354 55.000 0.00 0.00 0.00 3.51
4881 5716 0.108615 CGCTTCTCGGTCATTCCTGT 60.109 55.000 0.00 0.00 33.78 4.00
4882 5717 2.670635 CGCTTCTCGGTCATTCCTG 58.329 57.895 0.00 0.00 33.78 3.86
4892 5727 1.640428 TTCTGCAATACCGCTTCTCG 58.360 50.000 0.00 0.00 38.08 4.04
4893 5728 3.188460 TGTTTTCTGCAATACCGCTTCTC 59.812 43.478 0.00 0.00 0.00 2.87
4894 5729 3.146066 TGTTTTCTGCAATACCGCTTCT 58.854 40.909 0.00 0.00 0.00 2.85
4895 5730 3.552604 TGTTTTCTGCAATACCGCTTC 57.447 42.857 0.00 0.00 0.00 3.86
4896 5731 3.367292 CCATGTTTTCTGCAATACCGCTT 60.367 43.478 0.00 0.00 0.00 4.68
4897 5732 2.164219 CCATGTTTTCTGCAATACCGCT 59.836 45.455 0.00 0.00 0.00 5.52
4898 5733 2.163412 TCCATGTTTTCTGCAATACCGC 59.837 45.455 0.00 0.00 0.00 5.68
4899 5734 4.433186 TTCCATGTTTTCTGCAATACCG 57.567 40.909 0.00 0.00 0.00 4.02
4900 5735 7.319646 TGTAATTCCATGTTTTCTGCAATACC 58.680 34.615 0.00 0.00 0.00 2.73
4901 5736 8.028938 ACTGTAATTCCATGTTTTCTGCAATAC 58.971 33.333 0.00 0.00 0.00 1.89
4902 5737 8.121305 ACTGTAATTCCATGTTTTCTGCAATA 57.879 30.769 0.00 0.00 0.00 1.90
4903 5738 6.996509 ACTGTAATTCCATGTTTTCTGCAAT 58.003 32.000 0.00 0.00 0.00 3.56
4904 5739 6.403866 ACTGTAATTCCATGTTTTCTGCAA 57.596 33.333 0.00 0.00 0.00 4.08
4905 5740 6.488344 TGTACTGTAATTCCATGTTTTCTGCA 59.512 34.615 0.00 0.00 0.00 4.41
4906 5741 6.908825 TGTACTGTAATTCCATGTTTTCTGC 58.091 36.000 0.00 0.00 0.00 4.26
4907 5742 8.567948 AGTTGTACTGTAATTCCATGTTTTCTG 58.432 33.333 0.00 0.00 0.00 3.02
4908 5743 8.567948 CAGTTGTACTGTAATTCCATGTTTTCT 58.432 33.333 0.00 0.00 41.19 2.52
4909 5744 8.564574 TCAGTTGTACTGTAATTCCATGTTTTC 58.435 33.333 6.71 0.00 46.03 2.29
4910 5745 8.458573 TCAGTTGTACTGTAATTCCATGTTTT 57.541 30.769 6.71 0.00 46.03 2.43
4911 5746 8.349983 GTTCAGTTGTACTGTAATTCCATGTTT 58.650 33.333 6.71 0.00 46.03 2.83
4912 5747 7.307751 CGTTCAGTTGTACTGTAATTCCATGTT 60.308 37.037 6.71 0.00 46.03 2.71
4913 5748 6.147164 CGTTCAGTTGTACTGTAATTCCATGT 59.853 38.462 6.71 0.00 46.03 3.21
4914 5749 6.367695 TCGTTCAGTTGTACTGTAATTCCATG 59.632 38.462 6.71 0.00 46.03 3.66
4915 5750 6.460781 TCGTTCAGTTGTACTGTAATTCCAT 58.539 36.000 6.71 0.00 46.03 3.41
4916 5751 5.845103 TCGTTCAGTTGTACTGTAATTCCA 58.155 37.500 6.71 0.00 46.03 3.53
4917 5752 6.963049 ATCGTTCAGTTGTACTGTAATTCC 57.037 37.500 6.71 0.00 46.03 3.01
4920 5755 9.263538 TGTTTTATCGTTCAGTTGTACTGTAAT 57.736 29.630 6.71 0.87 46.03 1.89
4921 5756 8.645730 TGTTTTATCGTTCAGTTGTACTGTAA 57.354 30.769 6.71 0.00 46.03 2.41
4922 5757 8.136800 TCTGTTTTATCGTTCAGTTGTACTGTA 58.863 33.333 6.71 0.00 46.03 2.74
4923 5758 6.982141 TCTGTTTTATCGTTCAGTTGTACTGT 59.018 34.615 6.71 0.00 46.03 3.55
4925 5760 8.428186 TTTCTGTTTTATCGTTCAGTTGTACT 57.572 30.769 0.00 0.00 0.00 2.73
4926 5761 8.545420 TCTTTCTGTTTTATCGTTCAGTTGTAC 58.455 33.333 0.00 0.00 0.00 2.90
4927 5762 8.651391 TCTTTCTGTTTTATCGTTCAGTTGTA 57.349 30.769 0.00 0.00 0.00 2.41
4928 5763 7.254795 CCTCTTTCTGTTTTATCGTTCAGTTGT 60.255 37.037 0.00 0.00 0.00 3.32
4929 5764 7.072030 CCTCTTTCTGTTTTATCGTTCAGTTG 58.928 38.462 0.00 0.00 0.00 3.16
4930 5765 6.204882 CCCTCTTTCTGTTTTATCGTTCAGTT 59.795 38.462 0.00 0.00 0.00 3.16
4931 5766 5.701290 CCCTCTTTCTGTTTTATCGTTCAGT 59.299 40.000 0.00 0.00 0.00 3.41
4932 5767 5.932303 TCCCTCTTTCTGTTTTATCGTTCAG 59.068 40.000 0.00 0.00 0.00 3.02
4933 5768 5.860611 TCCCTCTTTCTGTTTTATCGTTCA 58.139 37.500 0.00 0.00 0.00 3.18
4934 5769 6.986904 ATCCCTCTTTCTGTTTTATCGTTC 57.013 37.500 0.00 0.00 0.00 3.95
4935 5770 6.715264 ACAATCCCTCTTTCTGTTTTATCGTT 59.285 34.615 0.00 0.00 0.00 3.85
4936 5771 6.238648 ACAATCCCTCTTTCTGTTTTATCGT 58.761 36.000 0.00 0.00 0.00 3.73
4937 5772 6.743575 ACAATCCCTCTTTCTGTTTTATCG 57.256 37.500 0.00 0.00 0.00 2.92
4938 5773 7.336931 TGCTACAATCCCTCTTTCTGTTTTATC 59.663 37.037 0.00 0.00 0.00 1.75
4939 5774 7.175104 TGCTACAATCCCTCTTTCTGTTTTAT 58.825 34.615 0.00 0.00 0.00 1.40
4940 5775 6.539173 TGCTACAATCCCTCTTTCTGTTTTA 58.461 36.000 0.00 0.00 0.00 1.52
4941 5776 5.385198 TGCTACAATCCCTCTTTCTGTTTT 58.615 37.500 0.00 0.00 0.00 2.43
4942 5777 4.985538 TGCTACAATCCCTCTTTCTGTTT 58.014 39.130 0.00 0.00 0.00 2.83
4943 5778 4.640771 TGCTACAATCCCTCTTTCTGTT 57.359 40.909 0.00 0.00 0.00 3.16
4944 5779 4.851639 ATGCTACAATCCCTCTTTCTGT 57.148 40.909 0.00 0.00 0.00 3.41
4945 5780 5.188434 TCAATGCTACAATCCCTCTTTCTG 58.812 41.667 0.00 0.00 0.00 3.02
4946 5781 5.441718 TCAATGCTACAATCCCTCTTTCT 57.558 39.130 0.00 0.00 0.00 2.52
4947 5782 6.705863 AATCAATGCTACAATCCCTCTTTC 57.294 37.500 0.00 0.00 0.00 2.62
4948 5783 7.486407 AAAATCAATGCTACAATCCCTCTTT 57.514 32.000 0.00 0.00 0.00 2.52
4949 5784 7.486407 AAAAATCAATGCTACAATCCCTCTT 57.514 32.000 0.00 0.00 0.00 2.85
4970 5805 9.743581 AAGGAAATATTACGGTAAGAGGAAAAA 57.256 29.630 6.74 0.00 0.00 1.94
4971 5806 9.387257 GAAGGAAATATTACGGTAAGAGGAAAA 57.613 33.333 6.74 0.00 0.00 2.29
4972 5807 8.542080 TGAAGGAAATATTACGGTAAGAGGAAA 58.458 33.333 6.74 0.00 0.00 3.13
4973 5808 8.081517 TGAAGGAAATATTACGGTAAGAGGAA 57.918 34.615 6.74 0.00 0.00 3.36
4974 5809 7.664552 TGAAGGAAATATTACGGTAAGAGGA 57.335 36.000 6.74 0.00 0.00 3.71
4975 5810 7.985752 AGTTGAAGGAAATATTACGGTAAGAGG 59.014 37.037 6.74 0.00 0.00 3.69
4976 5811 8.943909 AGTTGAAGGAAATATTACGGTAAGAG 57.056 34.615 6.74 0.00 0.00 2.85
4977 5812 8.755977 AGAGTTGAAGGAAATATTACGGTAAGA 58.244 33.333 6.74 2.01 0.00 2.10
4978 5813 8.818057 CAGAGTTGAAGGAAATATTACGGTAAG 58.182 37.037 6.74 0.00 0.00 2.34
4979 5814 8.316214 ACAGAGTTGAAGGAAATATTACGGTAA 58.684 33.333 2.62 2.62 0.00 2.85
4980 5815 7.844009 ACAGAGTTGAAGGAAATATTACGGTA 58.156 34.615 0.00 0.00 0.00 4.02
4981 5816 6.708285 ACAGAGTTGAAGGAAATATTACGGT 58.292 36.000 0.00 0.00 0.00 4.83
4982 5817 7.464358 CAACAGAGTTGAAGGAAATATTACGG 58.536 38.462 3.91 0.00 0.00 4.02
4983 5818 6.961554 GCAACAGAGTTGAAGGAAATATTACG 59.038 38.462 13.58 0.00 0.00 3.18
4984 5819 7.816640 TGCAACAGAGTTGAAGGAAATATTAC 58.183 34.615 13.58 0.00 0.00 1.89
4985 5820 7.994425 TGCAACAGAGTTGAAGGAAATATTA 57.006 32.000 13.58 0.00 0.00 0.98
4986 5821 6.899393 TGCAACAGAGTTGAAGGAAATATT 57.101 33.333 13.58 0.00 0.00 1.28
4987 5822 7.318141 CAATGCAACAGAGTTGAAGGAAATAT 58.682 34.615 13.58 0.00 0.00 1.28
4988 5823 6.294675 CCAATGCAACAGAGTTGAAGGAAATA 60.295 38.462 13.58 0.00 0.00 1.40
4989 5824 5.510179 CCAATGCAACAGAGTTGAAGGAAAT 60.510 40.000 13.58 0.00 0.00 2.17
4990 5825 4.202141 CCAATGCAACAGAGTTGAAGGAAA 60.202 41.667 13.58 0.00 0.00 3.13
4991 5826 3.318839 CCAATGCAACAGAGTTGAAGGAA 59.681 43.478 13.58 0.00 0.00 3.36
4992 5827 2.886523 CCAATGCAACAGAGTTGAAGGA 59.113 45.455 13.58 0.00 0.00 3.36
4993 5828 2.608752 GCCAATGCAACAGAGTTGAAGG 60.609 50.000 13.58 9.22 37.47 3.46
4994 5829 2.608752 GGCCAATGCAACAGAGTTGAAG 60.609 50.000 13.58 0.49 40.13 3.02
4995 5830 1.340889 GGCCAATGCAACAGAGTTGAA 59.659 47.619 13.58 3.46 40.13 2.69
4996 5831 0.961019 GGCCAATGCAACAGAGTTGA 59.039 50.000 13.58 0.22 40.13 3.18
4997 5832 0.963962 AGGCCAATGCAACAGAGTTG 59.036 50.000 5.01 5.56 40.13 3.16
4998 5833 1.342174 CAAGGCCAATGCAACAGAGTT 59.658 47.619 5.01 0.00 40.13 3.01
4999 5834 0.963962 CAAGGCCAATGCAACAGAGT 59.036 50.000 5.01 0.00 40.13 3.24
5000 5835 0.389426 GCAAGGCCAATGCAACAGAG 60.389 55.000 24.03 0.00 43.29 3.35
5001 5836 0.828762 AGCAAGGCCAATGCAACAGA 60.829 50.000 28.60 0.00 46.22 3.41
5002 5837 0.669318 CAGCAAGGCCAATGCAACAG 60.669 55.000 28.60 15.19 46.22 3.16
5003 5838 1.114119 TCAGCAAGGCCAATGCAACA 61.114 50.000 28.60 13.45 46.22 3.33
5004 5839 0.668401 GTCAGCAAGGCCAATGCAAC 60.668 55.000 28.60 22.49 46.22 4.17
5005 5840 1.114119 TGTCAGCAAGGCCAATGCAA 61.114 50.000 28.60 16.96 46.22 4.08
5006 5841 0.901114 ATGTCAGCAAGGCCAATGCA 60.901 50.000 28.60 13.30 46.22 3.96
5007 5842 0.459585 CATGTCAGCAAGGCCAATGC 60.460 55.000 22.15 22.15 44.15 3.56
5008 5843 0.174845 CCATGTCAGCAAGGCCAATG 59.825 55.000 5.01 4.56 0.00 2.82
5009 5844 0.251922 ACCATGTCAGCAAGGCCAAT 60.252 50.000 5.01 0.00 36.99 3.16
5010 5845 0.895100 GACCATGTCAGCAAGGCCAA 60.895 55.000 5.01 0.00 36.99 4.52
5011 5846 1.303561 GACCATGTCAGCAAGGCCA 60.304 57.895 5.01 0.00 36.99 5.36
5012 5847 2.401766 CGACCATGTCAGCAAGGCC 61.402 63.158 0.00 0.00 36.99 5.19
5013 5848 2.401766 CCGACCATGTCAGCAAGGC 61.402 63.158 0.00 0.00 36.99 4.35
5014 5849 2.401766 GCCGACCATGTCAGCAAGG 61.402 63.158 0.00 0.00 36.16 3.61
5015 5850 2.401766 GGCCGACCATGTCAGCAAG 61.402 63.158 4.97 0.00 37.66 4.01
5016 5851 2.359850 GGCCGACCATGTCAGCAA 60.360 61.111 4.97 0.00 37.66 3.91
5017 5852 3.635191 TGGCCGACCATGTCAGCA 61.635 61.111 0.00 0.00 42.67 4.41
5025 5860 0.982852 AAGGATGATCTGGCCGACCA 60.983 55.000 0.00 0.00 46.51 4.02
5026 5861 0.533755 CAAGGATGATCTGGCCGACC 60.534 60.000 0.00 0.00 0.00 4.79
5027 5862 0.179000 ACAAGGATGATCTGGCCGAC 59.821 55.000 0.00 0.00 0.00 4.79
5028 5863 0.178767 CACAAGGATGATCTGGCCGA 59.821 55.000 0.00 0.00 0.00 5.54
5029 5864 0.178767 TCACAAGGATGATCTGGCCG 59.821 55.000 0.00 0.00 0.00 6.13
5030 5865 1.673168 GTCACAAGGATGATCTGGCC 58.327 55.000 0.00 0.00 0.00 5.36


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.