Multiple sequence alignment - TraesCS4A01G485700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G485700 chr4A 100.000 4014 0 0 874 4887 739151566 739155579 0.000000e+00 7413.0
1 TraesCS4A01G485700 chr4A 100.000 621 0 0 1 621 739150693 739151313 0.000000e+00 1147.0
2 TraesCS4A01G485700 chr4A 80.521 729 139 3 3169 3895 739080543 739081270 1.540000e-154 556.0
3 TraesCS4A01G485700 chr4A 80.502 677 116 14 3199 3870 739131523 739132188 5.650000e-139 505.0
4 TraesCS4A01G485700 chr4A 76.657 664 146 5 3199 3856 739275475 739276135 4.650000e-95 359.0
5 TraesCS4A01G485700 chr4A 76.070 631 139 10 3228 3852 738887512 738886888 7.890000e-83 318.0
6 TraesCS4A01G485700 chr4A 95.429 175 8 0 4646 4820 739159855 739160029 3.720000e-71 279.0
7 TraesCS4A01G485700 chr7D 94.324 2114 92 11 1915 4020 4414145 4412052 0.000000e+00 3214.0
8 TraesCS4A01G485700 chr7D 79.209 1972 357 37 1949 3895 4503412 4501469 0.000000e+00 1321.0
9 TraesCS4A01G485700 chr7D 89.627 858 50 15 910 1750 4414977 4414142 0.000000e+00 1055.0
10 TraesCS4A01G485700 chr7D 79.514 947 183 9 1956 2897 4425722 4424782 0.000000e+00 664.0
11 TraesCS4A01G485700 chr7D 87.776 499 33 11 1 499 4415884 4415414 4.270000e-155 558.0
12 TraesCS4A01G485700 chr7D 80.119 674 118 14 3202 3870 4424232 4423570 5.690000e-134 488.0
13 TraesCS4A01G485700 chr7D 76.488 672 141 11 3199 3860 4289593 4288929 2.800000e-92 350.0
14 TraesCS4A01G485700 chr7D 88.889 171 18 1 1745 1915 161541246 161541415 4.960000e-50 209.0
15 TraesCS4A01G485700 chr7D 93.860 114 4 2 492 605 4415386 4415276 8.410000e-38 169.0
16 TraesCS4A01G485700 chr7D 100.000 31 0 0 4834 4864 604569963 604569933 1.900000e-04 58.4
17 TraesCS4A01G485700 chr7A 93.138 2113 101 19 1912 4020 4208214 4206142 0.000000e+00 3059.0
18 TraesCS4A01G485700 chr7A 77.844 2004 357 55 1956 3895 4329851 4327871 0.000000e+00 1160.0
19 TraesCS4A01G485700 chr7A 87.872 874 63 15 910 1750 4209115 4208252 0.000000e+00 987.0
20 TraesCS4A01G485700 chr7A 79.852 948 180 9 1956 2898 4254334 4253393 0.000000e+00 682.0
21 TraesCS4A01G485700 chr7A 84.168 499 34 14 32 498 4210029 4209544 4.490000e-120 442.0
22 TraesCS4A01G485700 chr7A 84.753 223 19 8 4626 4840 4202970 4202755 4.960000e-50 209.0
23 TraesCS4A01G485700 chr7A 87.640 178 19 2 4631 4807 4196127 4195952 2.310000e-48 204.0
24 TraesCS4A01G485700 chr7A 84.305 223 20 8 4626 4840 4203602 4203387 2.310000e-48 204.0
25 TraesCS4A01G485700 chr7A 92.308 52 4 0 4835 4886 664772709 664772658 1.890000e-09 75.0
26 TraesCS4A01G485700 chr2B 91.358 162 14 0 1753 1914 486633358 486633197 6.370000e-54 222.0
27 TraesCS4A01G485700 chr2B 92.982 57 4 0 4831 4887 23345397 23345453 3.130000e-12 84.2
28 TraesCS4A01G485700 chr1B 90.476 168 15 1 1753 1920 565039861 565039695 2.290000e-53 220.0
29 TraesCS4A01G485700 chr3B 89.535 172 17 1 1752 1923 59180443 59180613 2.960000e-52 217.0
30 TraesCS4A01G485700 chr2A 88.043 184 18 4 1749 1931 606381412 606381232 1.070000e-51 215.0
31 TraesCS4A01G485700 chr2A 96.000 75 2 1 4559 4633 42009196 42009123 2.390000e-23 121.0
32 TraesCS4A01G485700 chr2A 94.203 69 4 0 4450 4518 42009265 42009197 6.690000e-19 106.0
33 TraesCS4A01G485700 chr2A 94.444 36 2 0 1982 2017 722756459 722756424 6.830000e-04 56.5
34 TraesCS4A01G485700 chr3D 89.412 170 17 1 1753 1922 537154702 537154870 3.830000e-51 213.0
35 TraesCS4A01G485700 chr3D 86.528 193 23 3 1745 1936 459077262 459077452 4.960000e-50 209.0
36 TraesCS4A01G485700 chr3D 80.000 120 19 4 4507 4624 47187342 47187458 3.130000e-12 84.2
37 TraesCS4A01G485700 chr2D 89.412 170 17 1 1745 1914 87407532 87407364 3.830000e-51 213.0
38 TraesCS4A01G485700 chr6B 88.506 174 19 1 1753 1926 481140288 481140116 4.960000e-50 209.0
39 TraesCS4A01G485700 chr6B 95.556 45 2 0 4843 4887 448931025 448931069 6.790000e-09 73.1
40 TraesCS4A01G485700 chr3A 94.000 50 2 1 4836 4885 215351648 215351696 1.890000e-09 75.0
41 TraesCS4A01G485700 chr3A 87.500 48 5 1 4840 4887 653847652 653847606 2.000000e-03 54.7
42 TraesCS4A01G485700 chr1D 95.556 45 2 0 4843 4887 276691225 276691269 6.790000e-09 73.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G485700 chr4A 739150693 739155579 4886 False 4280.0 7413 100.00000 1 4887 2 chr4A.!!$F5 4886
1 TraesCS4A01G485700 chr4A 739080543 739081270 727 False 556.0 556 80.52100 3169 3895 1 chr4A.!!$F1 726
2 TraesCS4A01G485700 chr4A 739131523 739132188 665 False 505.0 505 80.50200 3199 3870 1 chr4A.!!$F2 671
3 TraesCS4A01G485700 chr4A 739275475 739276135 660 False 359.0 359 76.65700 3199 3856 1 chr4A.!!$F4 657
4 TraesCS4A01G485700 chr4A 738886888 738887512 624 True 318.0 318 76.07000 3228 3852 1 chr4A.!!$R1 624
5 TraesCS4A01G485700 chr7D 4501469 4503412 1943 True 1321.0 1321 79.20900 1949 3895 1 chr7D.!!$R2 1946
6 TraesCS4A01G485700 chr7D 4412052 4415884 3832 True 1249.0 3214 91.39675 1 4020 4 chr7D.!!$R4 4019
7 TraesCS4A01G485700 chr7D 4423570 4425722 2152 True 576.0 664 79.81650 1956 3870 2 chr7D.!!$R5 1914
8 TraesCS4A01G485700 chr7D 4288929 4289593 664 True 350.0 350 76.48800 3199 3860 1 chr7D.!!$R1 661
9 TraesCS4A01G485700 chr7A 4327871 4329851 1980 True 1160.0 1160 77.84400 1956 3895 1 chr7A.!!$R3 1939
10 TraesCS4A01G485700 chr7A 4202755 4210029 7274 True 980.2 3059 86.84720 32 4840 5 chr7A.!!$R5 4808
11 TraesCS4A01G485700 chr7A 4253393 4254334 941 True 682.0 682 79.85200 1956 2898 1 chr7A.!!$R2 942

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
198 203 0.384309 CAGTCCATGCCATGACATGC 59.616 55.0 15.88 4.22 44.98 4.06 F
314 319 0.460987 CGAGGCTGGAACCACTCATC 60.461 60.0 0.00 3.74 0.00 2.92 F
1058 1153 0.036294 GACTCCCTTTCCAGTTCCGG 60.036 60.0 0.00 0.00 0.00 5.14 F
1064 1159 0.602905 CTTTCCAGTTCCGGAGCGTT 60.603 55.0 13.05 0.00 36.12 4.84 F
2018 2166 0.696501 AGTACAATCCCAAGGGCGTT 59.303 50.0 0.00 0.00 34.68 4.84 F
2414 2562 0.751643 GTCATGCCGGTATTGCCCTT 60.752 55.0 0.66 0.00 0.00 3.95 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1041 1136 0.250513 CTCCGGAACTGGAAAGGGAG 59.749 60.000 5.23 0.00 37.64 4.30 R
1723 1865 0.393077 AAACAGACAGCTGGTACGCT 59.607 50.000 19.93 4.13 42.49 5.07 R
2594 2742 0.107703 CATGAAACCTCCCTAGCGCA 60.108 55.000 11.47 0.00 0.00 6.09 R
2600 2748 0.622665 CCTCTGCATGAAACCTCCCT 59.377 55.000 0.00 0.00 0.00 4.20 R
3230 3688 1.463444 GATGTTCGTCCGGGTTTTCTG 59.537 52.381 0.00 0.00 0.00 3.02 R
4214 4683 0.377203 CGGGGCGAACATTTAAGCTC 59.623 55.000 0.00 0.00 0.00 4.09 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
78 79 7.496346 TTTCAATACTATCACCCTTGAGTCT 57.504 36.000 0.00 0.00 34.35 3.24
89 90 2.503356 CCCTTGAGTCTTGGCTAGTGAT 59.497 50.000 0.00 0.00 0.00 3.06
183 188 1.664151 GTATAAGCGTTGTGGCCAGTC 59.336 52.381 5.11 0.00 0.00 3.51
198 203 0.384309 CAGTCCATGCCATGACATGC 59.616 55.000 15.88 4.22 44.98 4.06
202 207 1.214923 TCCATGCCATGACATGCCTAA 59.785 47.619 15.88 0.00 44.98 2.69
210 215 6.724351 TGCCATGACATGCCTAATCTATAAT 58.276 36.000 10.10 0.00 0.00 1.28
232 237 5.666969 TTTATGTTGCACTATGTATCGGC 57.333 39.130 0.00 0.00 0.00 5.54
240 245 0.881796 CTATGTATCGGCGGCTCTCA 59.118 55.000 7.21 1.38 0.00 3.27
246 251 3.916544 CGGCGGCTCTCATGGCTA 61.917 66.667 7.61 0.00 0.00 3.93
254 259 1.335506 GCTCTCATGGCTAGCGTCTAC 60.336 57.143 9.00 0.00 0.00 2.59
266 271 1.465387 AGCGTCTACTGTGAAGTCTCG 59.535 52.381 0.00 0.00 0.00 4.04
281 286 5.983720 TGAAGTCTCGTTTCCTAGAACTTTG 59.016 40.000 0.00 0.00 0.00 2.77
294 299 0.609131 AACTTTGCTCCATGGTCCGG 60.609 55.000 12.58 0.00 0.00 5.14
314 319 0.460987 CGAGGCTGGAACCACTCATC 60.461 60.000 0.00 3.74 0.00 2.92
396 429 7.173390 GCATCCTTAGACTTTGTTGTACTCTTT 59.827 37.037 0.00 0.00 0.00 2.52
459 492 1.067142 TCACTAGTTTTGAGCGGCGAT 60.067 47.619 12.98 2.76 0.00 4.58
476 509 3.506455 GGCGATGCTGGTACTCTATCTTA 59.494 47.826 0.00 0.00 0.00 2.10
527 595 6.425721 CCGGATTTGTTGTACTCTTTAGTTGA 59.574 38.462 0.00 0.00 37.15 3.18
555 623 4.264253 TGGATGTTGTGATCAATGAGGTC 58.736 43.478 0.00 0.00 35.92 3.85
595 663 3.032339 CGGCGAGGCTAGTACTCC 58.968 66.667 0.00 0.00 0.00 3.85
612 680 6.995364 AGTACTCCCTCTTGTTTTCTTCTAC 58.005 40.000 0.00 0.00 0.00 2.59
898 966 1.117150 TCGGTCCTGCCTAACATACC 58.883 55.000 0.00 0.00 33.04 2.73
901 969 2.116238 GGTCCTGCCTAACATACCTCA 58.884 52.381 0.00 0.00 33.42 3.86
912 980 3.914426 ACATACCTCACCAAGATCCAC 57.086 47.619 0.00 0.00 0.00 4.02
913 981 3.454858 ACATACCTCACCAAGATCCACT 58.545 45.455 0.00 0.00 0.00 4.00
914 982 3.846588 ACATACCTCACCAAGATCCACTT 59.153 43.478 0.00 0.00 39.70 3.16
932 1026 5.069501 CACTTGGGTGGAAGTAGTAGTAC 57.930 47.826 0.00 0.00 39.59 2.73
941 1036 3.629855 GGAAGTAGTAGTACCGTTCCTCC 59.370 52.174 16.32 6.31 33.52 4.30
976 1071 4.580551 CGTGATACGGCGGTCCCC 62.581 72.222 13.24 1.90 38.08 4.81
977 1072 3.463585 GTGATACGGCGGTCCCCA 61.464 66.667 13.24 0.00 0.00 4.96
1011 1106 2.300152 ACATACATACATGGCTCCTCCG 59.700 50.000 0.00 0.00 37.80 4.63
1041 1136 3.492756 GCAAGATAAGCCGATCAAGAGAC 59.507 47.826 0.00 0.00 0.00 3.36
1058 1153 0.036294 GACTCCCTTTCCAGTTCCGG 60.036 60.000 0.00 0.00 0.00 5.14
1064 1159 0.602905 CTTTCCAGTTCCGGAGCGTT 60.603 55.000 13.05 0.00 36.12 4.84
1320 1442 2.668550 AAAGCGGCCGTTCTGTCC 60.669 61.111 28.70 7.91 0.00 4.02
1365 1487 1.519246 CGAGCAGGAGATCAAGGCA 59.481 57.895 0.00 0.00 0.00 4.75
1490 1621 6.204688 GGTATGCAATCGATTAGTTCATTCCA 59.795 38.462 10.97 0.00 0.00 3.53
1491 1622 5.739752 TGCAATCGATTAGTTCATTCCAG 57.260 39.130 10.97 0.00 0.00 3.86
1492 1623 5.185454 TGCAATCGATTAGTTCATTCCAGT 58.815 37.500 10.97 0.00 0.00 4.00
1544 1675 5.357596 AGTTTTTGCCTTCATGTTTGCATTT 59.642 32.000 6.62 0.00 33.08 2.32
1560 1691 8.747471 TGTTTGCATTTCATGGTTTGATCTATA 58.253 29.630 0.00 0.00 33.34 1.31
1638 1771 5.476945 ACACAAACTGACTGTCTTTTCCTTT 59.523 36.000 9.51 0.00 0.00 3.11
1639 1772 6.015434 ACACAAACTGACTGTCTTTTCCTTTT 60.015 34.615 9.51 0.00 0.00 2.27
1644 1778 5.885912 ACTGACTGTCTTTTCCTTTTTGCTA 59.114 36.000 9.51 0.00 0.00 3.49
1701 1839 4.853468 TGCAGATCCCAATGGTTAGTAA 57.147 40.909 0.00 0.00 0.00 2.24
1702 1840 4.523083 TGCAGATCCCAATGGTTAGTAAC 58.477 43.478 4.32 4.32 0.00 2.50
1719 1861 4.067896 AGTAACACTTCATCACTTGCTGG 58.932 43.478 0.00 0.00 0.00 4.85
1720 1862 2.645838 ACACTTCATCACTTGCTGGT 57.354 45.000 0.00 0.00 0.00 4.00
1721 1863 2.224606 ACACTTCATCACTTGCTGGTG 58.775 47.619 3.78 3.78 38.44 4.17
1722 1864 2.224606 CACTTCATCACTTGCTGGTGT 58.775 47.619 8.87 0.00 38.28 4.16
1723 1865 3.181455 ACACTTCATCACTTGCTGGTGTA 60.181 43.478 8.87 0.00 38.28 2.90
1724 1866 3.434641 CACTTCATCACTTGCTGGTGTAG 59.565 47.826 8.87 0.82 35.12 2.74
1750 1892 4.315803 ACCAGCTGTCTGTTTGTATGTAC 58.684 43.478 13.81 0.00 38.66 2.90
1751 1893 4.040461 ACCAGCTGTCTGTTTGTATGTACT 59.960 41.667 13.81 0.00 38.66 2.73
1754 1896 6.090898 CCAGCTGTCTGTTTGTATGTACTTAC 59.909 42.308 13.81 11.09 38.66 2.34
1755 1897 6.868864 CAGCTGTCTGTTTGTATGTACTTACT 59.131 38.462 17.09 0.00 35.61 2.24
1756 1898 7.385205 CAGCTGTCTGTTTGTATGTACTTACTT 59.615 37.037 17.09 0.00 35.61 2.24
1757 1899 7.599245 AGCTGTCTGTTTGTATGTACTTACTTC 59.401 37.037 17.09 9.60 0.00 3.01
1758 1900 7.148623 GCTGTCTGTTTGTATGTACTTACTTCC 60.149 40.741 17.09 7.52 0.00 3.46
1759 1901 7.959175 TGTCTGTTTGTATGTACTTACTTCCT 58.041 34.615 17.09 0.00 0.00 3.36
1760 1902 8.086522 TGTCTGTTTGTATGTACTTACTTCCTC 58.913 37.037 17.09 6.76 0.00 3.71
1761 1903 7.544915 GTCTGTTTGTATGTACTTACTTCCTCC 59.455 40.741 17.09 3.81 0.00 4.30
1762 1904 6.392354 TGTTTGTATGTACTTACTTCCTCCG 58.608 40.000 17.09 0.00 0.00 4.63
1763 1905 6.015180 TGTTTGTATGTACTTACTTCCTCCGT 60.015 38.462 17.09 0.00 0.00 4.69
1764 1906 6.594788 TTGTATGTACTTACTTCCTCCGTT 57.405 37.500 17.09 0.00 0.00 4.44
1765 1907 6.199937 TGTATGTACTTACTTCCTCCGTTC 57.800 41.667 17.09 0.00 0.00 3.95
1766 1908 4.732672 ATGTACTTACTTCCTCCGTTCC 57.267 45.455 0.00 0.00 0.00 3.62
1767 1909 3.771216 TGTACTTACTTCCTCCGTTCCT 58.229 45.455 0.00 0.00 0.00 3.36
1768 1910 4.922206 TGTACTTACTTCCTCCGTTCCTA 58.078 43.478 0.00 0.00 0.00 2.94
1769 1911 5.324409 TGTACTTACTTCCTCCGTTCCTAA 58.676 41.667 0.00 0.00 0.00 2.69
1770 1912 5.774690 TGTACTTACTTCCTCCGTTCCTAAA 59.225 40.000 0.00 0.00 0.00 1.85
1771 1913 6.438425 TGTACTTACTTCCTCCGTTCCTAAAT 59.562 38.462 0.00 0.00 0.00 1.40
1772 1914 7.615365 TGTACTTACTTCCTCCGTTCCTAAATA 59.385 37.037 0.00 0.00 0.00 1.40
1773 1915 7.672122 ACTTACTTCCTCCGTTCCTAAATAT 57.328 36.000 0.00 0.00 0.00 1.28
1774 1916 8.773033 ACTTACTTCCTCCGTTCCTAAATATA 57.227 34.615 0.00 0.00 0.00 0.86
1775 1917 9.205513 ACTTACTTCCTCCGTTCCTAAATATAA 57.794 33.333 0.00 0.00 0.00 0.98
1776 1918 9.694137 CTTACTTCCTCCGTTCCTAAATATAAG 57.306 37.037 0.00 0.00 0.00 1.73
1777 1919 7.672122 ACTTCCTCCGTTCCTAAATATAAGT 57.328 36.000 0.00 0.00 0.00 2.24
1778 1920 7.724287 ACTTCCTCCGTTCCTAAATATAAGTC 58.276 38.462 0.00 0.00 0.00 3.01
1779 1921 7.564292 ACTTCCTCCGTTCCTAAATATAAGTCT 59.436 37.037 0.00 0.00 0.00 3.24
1780 1922 7.909485 TCCTCCGTTCCTAAATATAAGTCTT 57.091 36.000 0.00 0.00 0.00 3.01
1781 1923 8.315220 TCCTCCGTTCCTAAATATAAGTCTTT 57.685 34.615 0.00 0.00 0.00 2.52
1782 1924 8.765517 TCCTCCGTTCCTAAATATAAGTCTTTT 58.234 33.333 0.00 0.00 0.00 2.27
1783 1925 9.392259 CCTCCGTTCCTAAATATAAGTCTTTTT 57.608 33.333 0.00 0.00 0.00 1.94
1857 1999 7.576236 AGTGTAGATTCACTCATTTTGTTTCG 58.424 34.615 0.00 0.00 44.07 3.46
1858 2000 7.226720 AGTGTAGATTCACTCATTTTGTTTCGT 59.773 33.333 0.00 0.00 44.07 3.85
1859 2001 8.492748 GTGTAGATTCACTCATTTTGTTTCGTA 58.507 33.333 0.00 0.00 35.68 3.43
1860 2002 9.214957 TGTAGATTCACTCATTTTGTTTCGTAT 57.785 29.630 0.00 0.00 0.00 3.06
1861 2003 9.478019 GTAGATTCACTCATTTTGTTTCGTATG 57.522 33.333 0.00 0.00 0.00 2.39
1862 2004 8.099364 AGATTCACTCATTTTGTTTCGTATGT 57.901 30.769 0.00 0.00 0.00 2.29
1863 2005 9.214957 AGATTCACTCATTTTGTTTCGTATGTA 57.785 29.630 0.00 0.00 0.00 2.29
1864 2006 9.478019 GATTCACTCATTTTGTTTCGTATGTAG 57.522 33.333 0.00 0.00 0.00 2.74
1865 2007 7.956420 TCACTCATTTTGTTTCGTATGTAGT 57.044 32.000 0.00 0.00 0.00 2.73
1866 2008 8.373048 TCACTCATTTTGTTTCGTATGTAGTT 57.627 30.769 0.00 0.00 0.00 2.24
1867 2009 8.492748 TCACTCATTTTGTTTCGTATGTAGTTC 58.507 33.333 0.00 0.00 0.00 3.01
1868 2010 8.279800 CACTCATTTTGTTTCGTATGTAGTTCA 58.720 33.333 0.00 0.00 0.00 3.18
1869 2011 8.999431 ACTCATTTTGTTTCGTATGTAGTTCAT 58.001 29.630 0.00 0.00 40.25 2.57
2018 2166 0.696501 AGTACAATCCCAAGGGCGTT 59.303 50.000 0.00 0.00 34.68 4.84
2102 2250 2.755469 GTTGCCATGGTGCCCGAT 60.755 61.111 14.67 0.00 0.00 4.18
2120 2268 4.058124 CCGATCAATGGTACGACATCAAT 58.942 43.478 0.00 0.00 0.00 2.57
2168 2316 1.682005 CCCCAATGGCACGGTCATT 60.682 57.895 0.00 0.00 38.47 2.57
2192 2340 2.048597 TACACGGGCAACAGCGAG 60.049 61.111 0.00 0.00 39.74 5.03
2195 2343 3.616721 ACGGGCAACAGCGAGACT 61.617 61.111 0.00 0.00 39.74 3.24
2225 2373 4.883354 CAATGCCTCGCCCTCCCC 62.883 72.222 0.00 0.00 0.00 4.81
2237 2385 3.528370 CTCCCCGCAGACCCTACG 61.528 72.222 0.00 0.00 0.00 3.51
2369 2517 3.343972 GACAACACATGGCGCACT 58.656 55.556 10.83 0.00 0.00 4.40
2414 2562 0.751643 GTCATGCCGGTATTGCCCTT 60.752 55.000 0.66 0.00 0.00 3.95
2535 2683 4.030452 GCGGTGGCAGCAACTCAC 62.030 66.667 17.80 0.00 39.62 3.51
2594 2742 5.474578 ACGATGAATGGCATGACTACTAT 57.525 39.130 0.00 0.00 37.34 2.12
2610 2758 1.413077 ACTATGCGCTAGGGAGGTTTC 59.587 52.381 11.61 0.00 0.00 2.78
2810 2958 1.825622 GGCAAGCCTCCAGGTATGC 60.826 63.158 13.44 13.44 43.43 3.14
2829 2980 9.587772 AGGTATGCTATTGTTCATCGATATTAC 57.412 33.333 0.00 0.00 0.00 1.89
2866 3018 8.519526 TGTGTTTACCATCTATCATTTGTTTCC 58.480 33.333 0.00 0.00 0.00 3.13
3090 3384 4.935205 TGTTACAGTACATGTCATGCCTTC 59.065 41.667 12.91 1.55 42.70 3.46
3128 3577 9.650539 AAGAATCATATGATTAGTTCTCGATGG 57.349 33.333 26.97 0.00 44.14 3.51
3230 3688 3.514309 TCCAAGGAAAGTAGTGCTAGACC 59.486 47.826 0.00 0.00 0.00 3.85
3761 4222 1.524393 TCGCGCGTCTACCCTATGA 60.524 57.895 30.98 1.78 0.00 2.15
3876 4337 3.009584 TCAGCACCAATACAACCATACCA 59.990 43.478 0.00 0.00 0.00 3.25
3890 4351 5.767277 ACCATACCATGATGCATGAGATA 57.233 39.130 2.46 0.00 43.81 1.98
3896 4357 9.353999 CATACCATGATGCATGAGATAAATTTG 57.646 33.333 2.46 0.00 43.81 2.32
3898 4359 7.788026 ACCATGATGCATGAGATAAATTTGTT 58.212 30.769 2.46 0.00 43.81 2.83
3900 4361 9.104965 CCATGATGCATGAGATAAATTTGTTTT 57.895 29.630 2.46 0.00 43.81 2.43
4017 4486 3.442100 GCACCTTTATGCAGCAGATTTC 58.558 45.455 0.00 0.00 45.39 2.17
4020 4489 5.279384 CACCTTTATGCAGCAGATTTCATC 58.721 41.667 0.00 0.00 0.00 2.92
4021 4490 4.340381 ACCTTTATGCAGCAGATTTCATCC 59.660 41.667 0.00 0.00 0.00 3.51
4023 4492 5.507482 CCTTTATGCAGCAGATTTCATCCTG 60.507 44.000 0.00 0.00 0.00 3.86
4025 4494 2.362736 TGCAGCAGATTTCATCCTGTC 58.637 47.619 0.00 0.00 33.19 3.51
4026 4495 1.674962 GCAGCAGATTTCATCCTGTCC 59.325 52.381 0.00 0.00 33.19 4.02
4027 4496 2.942752 GCAGCAGATTTCATCCTGTCCA 60.943 50.000 0.00 0.00 33.19 4.02
4028 4497 3.552875 CAGCAGATTTCATCCTGTCCAT 58.447 45.455 0.00 0.00 33.19 3.41
4029 4498 3.564644 CAGCAGATTTCATCCTGTCCATC 59.435 47.826 0.00 0.00 33.19 3.51
4030 4499 3.201487 AGCAGATTTCATCCTGTCCATCA 59.799 43.478 0.00 0.00 33.19 3.07
4031 4500 4.141228 AGCAGATTTCATCCTGTCCATCAT 60.141 41.667 0.00 0.00 33.19 2.45
4032 4501 4.023107 GCAGATTTCATCCTGTCCATCATG 60.023 45.833 0.00 0.00 33.19 3.07
4033 4502 5.374071 CAGATTTCATCCTGTCCATCATGA 58.626 41.667 0.00 0.00 0.00 3.07
4034 4503 5.826208 CAGATTTCATCCTGTCCATCATGAA 59.174 40.000 0.00 0.00 0.00 2.57
4035 4504 6.320418 CAGATTTCATCCTGTCCATCATGAAA 59.680 38.462 0.00 8.05 40.69 2.69
4036 4505 7.014326 CAGATTTCATCCTGTCCATCATGAAAT 59.986 37.037 15.29 15.29 45.60 2.17
4037 4506 8.222637 AGATTTCATCCTGTCCATCATGAAATA 58.777 33.333 15.32 0.00 44.06 1.40
4039 4508 8.592529 TTTCATCCTGTCCATCATGAAATAAA 57.407 30.769 0.00 0.00 34.39 1.40
4040 4509 8.592529 TTCATCCTGTCCATCATGAAATAAAA 57.407 30.769 0.00 0.00 0.00 1.52
4041 4510 8.771521 TCATCCTGTCCATCATGAAATAAAAT 57.228 30.769 0.00 0.00 0.00 1.82
4042 4511 9.865152 TCATCCTGTCCATCATGAAATAAAATA 57.135 29.630 0.00 0.00 0.00 1.40
4075 4544 9.571810 TTAATACATTTTGTGCATCATCTTGAC 57.428 29.630 0.00 0.00 0.00 3.18
4076 4545 4.813027 ACATTTTGTGCATCATCTTGACC 58.187 39.130 0.00 0.00 0.00 4.02
4077 4546 3.940209 TTTTGTGCATCATCTTGACCC 57.060 42.857 0.00 0.00 0.00 4.46
4078 4547 1.452110 TTGTGCATCATCTTGACCCG 58.548 50.000 0.00 0.00 0.00 5.28
4079 4548 0.612744 TGTGCATCATCTTGACCCGA 59.387 50.000 0.00 0.00 0.00 5.14
4080 4549 1.003003 TGTGCATCATCTTGACCCGAA 59.997 47.619 0.00 0.00 0.00 4.30
4081 4550 1.667724 GTGCATCATCTTGACCCGAAG 59.332 52.381 0.00 0.00 0.00 3.79
4082 4551 1.554617 TGCATCATCTTGACCCGAAGA 59.445 47.619 0.00 0.00 36.41 2.87
4083 4552 1.936547 GCATCATCTTGACCCGAAGAC 59.063 52.381 0.00 0.00 34.79 3.01
4084 4553 2.677902 GCATCATCTTGACCCGAAGACA 60.678 50.000 0.00 0.00 34.79 3.41
4085 4554 3.193263 CATCATCTTGACCCGAAGACAG 58.807 50.000 0.00 0.00 34.79 3.51
4086 4555 2.525368 TCATCTTGACCCGAAGACAGA 58.475 47.619 0.00 0.00 34.79 3.41
4087 4556 2.493675 TCATCTTGACCCGAAGACAGAG 59.506 50.000 0.00 0.00 34.79 3.35
4088 4557 1.996798 TCTTGACCCGAAGACAGAGT 58.003 50.000 0.00 0.00 0.00 3.24
4089 4558 2.317040 TCTTGACCCGAAGACAGAGTT 58.683 47.619 0.00 0.00 0.00 3.01
4090 4559 3.493334 TCTTGACCCGAAGACAGAGTTA 58.507 45.455 0.00 0.00 0.00 2.24
4091 4560 3.893200 TCTTGACCCGAAGACAGAGTTAA 59.107 43.478 0.00 0.00 0.00 2.01
4092 4561 4.342951 TCTTGACCCGAAGACAGAGTTAAA 59.657 41.667 0.00 0.00 0.00 1.52
4093 4562 4.675976 TGACCCGAAGACAGAGTTAAAA 57.324 40.909 0.00 0.00 0.00 1.52
4094 4563 5.026038 TGACCCGAAGACAGAGTTAAAAA 57.974 39.130 0.00 0.00 0.00 1.94
4127 4596 6.765915 AAAAGGAATGGAATACTTCTCAGC 57.234 37.500 0.00 0.00 0.00 4.26
4128 4597 5.707066 AAGGAATGGAATACTTCTCAGCT 57.293 39.130 0.00 0.00 0.00 4.24
4129 4598 5.707066 AGGAATGGAATACTTCTCAGCTT 57.293 39.130 0.00 0.00 0.00 3.74
4130 4599 5.679601 AGGAATGGAATACTTCTCAGCTTC 58.320 41.667 0.00 0.00 0.00 3.86
4131 4600 5.428131 AGGAATGGAATACTTCTCAGCTTCT 59.572 40.000 0.00 0.00 0.00 2.85
4132 4601 6.613271 AGGAATGGAATACTTCTCAGCTTCTA 59.387 38.462 0.00 0.00 0.00 2.10
4133 4602 7.292120 AGGAATGGAATACTTCTCAGCTTCTAT 59.708 37.037 0.00 0.00 0.00 1.98
4134 4603 7.387397 GGAATGGAATACTTCTCAGCTTCTATG 59.613 40.741 0.00 0.00 0.00 2.23
4135 4604 6.798427 TGGAATACTTCTCAGCTTCTATGT 57.202 37.500 0.00 0.00 0.00 2.29
4136 4605 6.810911 TGGAATACTTCTCAGCTTCTATGTC 58.189 40.000 0.00 0.00 0.00 3.06
4137 4606 6.183360 TGGAATACTTCTCAGCTTCTATGTCC 60.183 42.308 0.00 0.00 0.00 4.02
4138 4607 6.041523 GGAATACTTCTCAGCTTCTATGTCCT 59.958 42.308 0.00 0.00 0.00 3.85
4139 4608 7.418483 GGAATACTTCTCAGCTTCTATGTCCTT 60.418 40.741 0.00 0.00 0.00 3.36
4140 4609 5.753721 ACTTCTCAGCTTCTATGTCCTTT 57.246 39.130 0.00 0.00 0.00 3.11
4141 4610 6.120507 ACTTCTCAGCTTCTATGTCCTTTT 57.879 37.500 0.00 0.00 0.00 2.27
4142 4611 6.538263 ACTTCTCAGCTTCTATGTCCTTTTT 58.462 36.000 0.00 0.00 0.00 1.94
4143 4612 7.680730 ACTTCTCAGCTTCTATGTCCTTTTTA 58.319 34.615 0.00 0.00 0.00 1.52
4144 4613 8.325046 ACTTCTCAGCTTCTATGTCCTTTTTAT 58.675 33.333 0.00 0.00 0.00 1.40
4145 4614 8.498054 TTCTCAGCTTCTATGTCCTTTTTATG 57.502 34.615 0.00 0.00 0.00 1.90
4146 4615 7.851228 TCTCAGCTTCTATGTCCTTTTTATGA 58.149 34.615 0.00 0.00 0.00 2.15
4147 4616 8.489489 TCTCAGCTTCTATGTCCTTTTTATGAT 58.511 33.333 0.00 0.00 0.00 2.45
4148 4617 9.118300 CTCAGCTTCTATGTCCTTTTTATGATT 57.882 33.333 0.00 0.00 0.00 2.57
4149 4618 9.466497 TCAGCTTCTATGTCCTTTTTATGATTT 57.534 29.630 0.00 0.00 0.00 2.17
4162 4631 9.810231 CCTTTTTATGATTTTTCATGTTTTCGG 57.190 29.630 0.00 0.00 0.00 4.30
4163 4632 9.316859 CTTTTTATGATTTTTCATGTTTTCGGC 57.683 29.630 0.00 0.00 0.00 5.54
4164 4633 7.953158 TTTATGATTTTTCATGTTTTCGGCA 57.047 28.000 0.00 0.00 0.00 5.69
4165 4634 7.579589 TTATGATTTTTCATGTTTTCGGCAG 57.420 32.000 0.00 0.00 0.00 4.85
4166 4635 4.942852 TGATTTTTCATGTTTTCGGCAGT 58.057 34.783 0.00 0.00 0.00 4.40
4167 4636 5.355596 TGATTTTTCATGTTTTCGGCAGTT 58.644 33.333 0.00 0.00 0.00 3.16
4168 4637 5.814705 TGATTTTTCATGTTTTCGGCAGTTT 59.185 32.000 0.00 0.00 0.00 2.66
4169 4638 6.980978 TGATTTTTCATGTTTTCGGCAGTTTA 59.019 30.769 0.00 0.00 0.00 2.01
4170 4639 7.655328 TGATTTTTCATGTTTTCGGCAGTTTAT 59.345 29.630 0.00 0.00 0.00 1.40
4171 4640 6.761731 TTTTCATGTTTTCGGCAGTTTATG 57.238 33.333 0.00 0.00 0.00 1.90
4172 4641 5.697473 TTCATGTTTTCGGCAGTTTATGA 57.303 34.783 0.00 0.00 0.00 2.15
4173 4642 5.295431 TCATGTTTTCGGCAGTTTATGAG 57.705 39.130 0.00 0.00 0.00 2.90
4174 4643 4.759693 TCATGTTTTCGGCAGTTTATGAGT 59.240 37.500 0.00 0.00 0.00 3.41
4175 4644 5.240623 TCATGTTTTCGGCAGTTTATGAGTT 59.759 36.000 0.00 0.00 0.00 3.01
4176 4645 5.508200 TGTTTTCGGCAGTTTATGAGTTT 57.492 34.783 0.00 0.00 0.00 2.66
4177 4646 5.897050 TGTTTTCGGCAGTTTATGAGTTTT 58.103 33.333 0.00 0.00 0.00 2.43
4178 4647 5.746245 TGTTTTCGGCAGTTTATGAGTTTTG 59.254 36.000 0.00 0.00 0.00 2.44
4179 4648 5.759506 TTTCGGCAGTTTATGAGTTTTGA 57.240 34.783 0.00 0.00 0.00 2.69
4180 4649 5.957842 TTCGGCAGTTTATGAGTTTTGAT 57.042 34.783 0.00 0.00 0.00 2.57
4181 4650 5.957842 TCGGCAGTTTATGAGTTTTGATT 57.042 34.783 0.00 0.00 0.00 2.57
4182 4651 5.698832 TCGGCAGTTTATGAGTTTTGATTG 58.301 37.500 0.00 0.00 0.00 2.67
4183 4652 5.471797 TCGGCAGTTTATGAGTTTTGATTGA 59.528 36.000 0.00 0.00 0.00 2.57
4184 4653 5.796935 CGGCAGTTTATGAGTTTTGATTGAG 59.203 40.000 0.00 0.00 0.00 3.02
4185 4654 6.568462 CGGCAGTTTATGAGTTTTGATTGAGT 60.568 38.462 0.00 0.00 0.00 3.41
4186 4655 7.360861 CGGCAGTTTATGAGTTTTGATTGAGTA 60.361 37.037 0.00 0.00 0.00 2.59
4187 4656 7.965107 GGCAGTTTATGAGTTTTGATTGAGTAG 59.035 37.037 0.00 0.00 0.00 2.57
4188 4657 8.721478 GCAGTTTATGAGTTTTGATTGAGTAGA 58.279 33.333 0.00 0.00 0.00 2.59
4193 4662 9.587772 TTATGAGTTTTGATTGAGTAGACTAGC 57.412 33.333 0.00 0.00 0.00 3.42
4194 4663 6.993079 TGAGTTTTGATTGAGTAGACTAGCA 58.007 36.000 0.00 0.00 0.00 3.49
4195 4664 7.615403 TGAGTTTTGATTGAGTAGACTAGCAT 58.385 34.615 0.00 0.00 0.00 3.79
4196 4665 8.097038 TGAGTTTTGATTGAGTAGACTAGCATT 58.903 33.333 0.00 0.00 0.00 3.56
4197 4666 8.854614 AGTTTTGATTGAGTAGACTAGCATTT 57.145 30.769 0.00 0.00 0.00 2.32
4198 4667 8.725148 AGTTTTGATTGAGTAGACTAGCATTTG 58.275 33.333 0.00 0.00 0.00 2.32
4199 4668 8.507249 GTTTTGATTGAGTAGACTAGCATTTGT 58.493 33.333 0.00 0.00 0.00 2.83
4200 4669 9.719355 TTTTGATTGAGTAGACTAGCATTTGTA 57.281 29.630 0.00 0.00 0.00 2.41
4201 4670 8.703604 TTGATTGAGTAGACTAGCATTTGTAC 57.296 34.615 0.00 0.00 0.00 2.90
4202 4671 6.972901 TGATTGAGTAGACTAGCATTTGTACG 59.027 38.462 0.00 0.00 0.00 3.67
4203 4672 5.892160 TGAGTAGACTAGCATTTGTACGT 57.108 39.130 0.00 0.00 0.00 3.57
4204 4673 6.990341 TGAGTAGACTAGCATTTGTACGTA 57.010 37.500 0.00 0.00 0.00 3.57
4205 4674 7.381766 TGAGTAGACTAGCATTTGTACGTAA 57.618 36.000 0.00 0.00 0.00 3.18
4206 4675 7.993101 TGAGTAGACTAGCATTTGTACGTAAT 58.007 34.615 0.00 0.00 0.00 1.89
4207 4676 8.464404 TGAGTAGACTAGCATTTGTACGTAATT 58.536 33.333 0.00 0.00 0.00 1.40
4208 4677 9.298774 GAGTAGACTAGCATTTGTACGTAATTT 57.701 33.333 0.00 0.00 0.00 1.82
4209 4678 9.649167 AGTAGACTAGCATTTGTACGTAATTTT 57.351 29.630 0.00 0.00 0.00 1.82
4230 4699 3.569250 TTTGGAGCTTAAATGTTCGCC 57.431 42.857 0.00 0.00 0.00 5.54
4231 4700 1.459450 TGGAGCTTAAATGTTCGCCC 58.541 50.000 0.00 0.00 0.00 6.13
4232 4701 0.738975 GGAGCTTAAATGTTCGCCCC 59.261 55.000 0.00 0.00 0.00 5.80
4233 4702 0.377203 GAGCTTAAATGTTCGCCCCG 59.623 55.000 0.00 0.00 0.00 5.73
4234 4703 1.029947 AGCTTAAATGTTCGCCCCGG 61.030 55.000 0.00 0.00 0.00 5.73
4235 4704 1.431845 CTTAAATGTTCGCCCCGGC 59.568 57.895 0.00 0.00 37.85 6.13
4245 4714 4.078516 GCCCCGGCGAACTACAGT 62.079 66.667 9.30 0.00 0.00 3.55
4246 4715 2.660802 CCCCGGCGAACTACAGTT 59.339 61.111 9.30 0.00 41.64 3.16
4257 4726 0.889306 ACTACAGTTCTCAGGTCCGC 59.111 55.000 0.00 0.00 0.00 5.54
4258 4727 0.888619 CTACAGTTCTCAGGTCCGCA 59.111 55.000 0.00 0.00 0.00 5.69
4259 4728 0.888619 TACAGTTCTCAGGTCCGCAG 59.111 55.000 0.00 0.00 0.00 5.18
4260 4729 1.739562 CAGTTCTCAGGTCCGCAGC 60.740 63.158 0.00 0.00 0.00 5.25
4261 4730 1.910772 AGTTCTCAGGTCCGCAGCT 60.911 57.895 0.00 0.00 0.00 4.24
4263 4732 2.947532 TTCTCAGGTCCGCAGCTGG 61.948 63.158 17.12 5.50 46.52 4.85
4264 4733 3.699894 CTCAGGTCCGCAGCTGGT 61.700 66.667 17.12 0.00 46.52 4.00
4265 4734 3.655810 CTCAGGTCCGCAGCTGGTC 62.656 68.421 17.12 0.00 46.52 4.02
4266 4735 3.699894 CAGGTCCGCAGCTGGTCT 61.700 66.667 17.12 0.00 43.38 3.85
4267 4736 3.699894 AGGTCCGCAGCTGGTCTG 61.700 66.667 17.12 0.00 45.62 3.51
4274 4743 4.488790 CAGCTGGTCTGCACCTTT 57.511 55.556 5.57 0.00 44.17 3.11
4275 4744 3.631453 CAGCTGGTCTGCACCTTTA 57.369 52.632 5.57 0.00 44.17 1.85
4276 4745 2.119801 CAGCTGGTCTGCACCTTTAT 57.880 50.000 5.57 0.00 44.17 1.40
4277 4746 1.741706 CAGCTGGTCTGCACCTTTATG 59.258 52.381 5.57 0.00 44.17 1.90
4278 4747 0.453390 GCTGGTCTGCACCTTTATGC 59.547 55.000 0.00 0.00 44.17 3.14
4287 4756 3.515330 GCACCTTTATGCAGCAGATTT 57.485 42.857 0.00 0.00 45.39 2.17
4288 4757 4.637483 GCACCTTTATGCAGCAGATTTA 57.363 40.909 0.00 0.00 45.39 1.40
4289 4758 4.997565 GCACCTTTATGCAGCAGATTTAA 58.002 39.130 0.00 0.00 45.39 1.52
4290 4759 5.594926 GCACCTTTATGCAGCAGATTTAAT 58.405 37.500 0.00 0.00 45.39 1.40
4291 4760 6.044682 GCACCTTTATGCAGCAGATTTAATT 58.955 36.000 0.00 0.00 45.39 1.40
4292 4761 7.202526 GCACCTTTATGCAGCAGATTTAATTA 58.797 34.615 0.00 0.00 45.39 1.40
4293 4762 7.869429 GCACCTTTATGCAGCAGATTTAATTAT 59.131 33.333 0.00 0.00 45.39 1.28
4294 4763 9.754382 CACCTTTATGCAGCAGATTTAATTATT 57.246 29.630 0.00 0.00 0.00 1.40
4372 7173 2.928334 AGATTGCTGGGTGCTCTATTG 58.072 47.619 0.00 0.00 43.37 1.90
4375 7176 1.207488 TGCTGGGTGCTCTATTGGGT 61.207 55.000 0.00 0.00 43.37 4.51
4381 7182 2.421529 GGGTGCTCTATTGGGTTGGTAG 60.422 54.545 0.00 0.00 0.00 3.18
4385 7186 2.421529 GCTCTATTGGGTTGGTAGTGGG 60.422 54.545 0.00 0.00 0.00 4.61
4392 7193 1.758592 GTTGGTAGTGGGCTGGACA 59.241 57.895 0.00 0.00 0.00 4.02
4402 7203 2.730524 GGCTGGACAGGAGAGAGGC 61.731 68.421 1.01 0.00 0.00 4.70
4417 7218 3.458163 GGCGTCCATCTCGTCCCA 61.458 66.667 0.00 0.00 0.00 4.37
4429 7230 0.614294 TCGTCCCATAAGGCCGAAAA 59.386 50.000 0.00 0.00 34.95 2.29
4430 7231 1.003349 TCGTCCCATAAGGCCGAAAAA 59.997 47.619 0.00 0.00 34.95 1.94
4431 7232 1.400494 CGTCCCATAAGGCCGAAAAAG 59.600 52.381 0.00 0.00 34.51 2.27
4432 7233 2.443416 GTCCCATAAGGCCGAAAAAGT 58.557 47.619 0.00 0.00 34.51 2.66
4433 7234 3.613030 GTCCCATAAGGCCGAAAAAGTA 58.387 45.455 0.00 0.00 34.51 2.24
4448 7249 9.525409 GCCGAAAAAGTATAGTATAGAGAACAA 57.475 33.333 0.00 0.00 0.00 2.83
4481 7282 8.467402 TTTGCAACTTTATTTTTGAAAGTCGA 57.533 26.923 0.00 0.00 44.43 4.20
4482 7283 8.641499 TTGCAACTTTATTTTTGAAAGTCGAT 57.359 26.923 0.00 0.00 44.43 3.59
4483 7284 8.280909 TGCAACTTTATTTTTGAAAGTCGATC 57.719 30.769 1.54 0.00 44.43 3.69
4485 7286 8.420189 GCAACTTTATTTTTGAAAGTCGATCAG 58.580 33.333 1.54 0.00 44.43 2.90
4486 7287 9.450807 CAACTTTATTTTTGAAAGTCGATCAGT 57.549 29.630 1.54 0.00 44.43 3.41
4497 7298 8.689251 TGAAAGTCGATCAGTTAATGTAGAAG 57.311 34.615 0.00 0.00 0.00 2.85
4498 7299 7.275779 TGAAAGTCGATCAGTTAATGTAGAAGC 59.724 37.037 0.00 0.00 0.00 3.86
4499 7300 6.458232 AGTCGATCAGTTAATGTAGAAGCT 57.542 37.500 0.00 0.00 0.00 3.74
4500 7301 6.500041 AGTCGATCAGTTAATGTAGAAGCTC 58.500 40.000 0.00 0.00 0.00 4.09
4501 7302 6.095580 AGTCGATCAGTTAATGTAGAAGCTCA 59.904 38.462 0.00 0.00 0.00 4.26
4502 7303 6.920758 GTCGATCAGTTAATGTAGAAGCTCAT 59.079 38.462 0.00 0.00 0.00 2.90
4503 7304 8.076781 GTCGATCAGTTAATGTAGAAGCTCATA 58.923 37.037 0.00 0.00 0.00 2.15
4504 7305 8.630037 TCGATCAGTTAATGTAGAAGCTCATAA 58.370 33.333 0.00 0.00 0.00 1.90
4505 7306 9.249457 CGATCAGTTAATGTAGAAGCTCATAAA 57.751 33.333 0.00 0.00 0.00 1.40
4508 7309 9.944376 TCAGTTAATGTAGAAGCTCATAAACTT 57.056 29.630 0.00 0.00 0.00 2.66
4509 7310 9.979270 CAGTTAATGTAGAAGCTCATAAACTTG 57.021 33.333 0.00 0.00 0.00 3.16
4510 7311 8.669243 AGTTAATGTAGAAGCTCATAAACTTGC 58.331 33.333 0.00 0.00 0.00 4.01
4511 7312 8.669243 GTTAATGTAGAAGCTCATAAACTTGCT 58.331 33.333 0.00 0.00 37.37 3.91
4512 7313 9.884636 TTAATGTAGAAGCTCATAAACTTGCTA 57.115 29.630 0.00 0.00 35.09 3.49
4513 7314 8.430801 AATGTAGAAGCTCATAAACTTGCTAG 57.569 34.615 0.00 0.00 35.09 3.42
4514 7315 7.170393 TGTAGAAGCTCATAAACTTGCTAGA 57.830 36.000 1.04 0.00 35.09 2.43
4515 7316 7.786030 TGTAGAAGCTCATAAACTTGCTAGAT 58.214 34.615 1.04 0.00 35.09 1.98
4516 7317 8.260818 TGTAGAAGCTCATAAACTTGCTAGATT 58.739 33.333 1.04 0.00 35.09 2.40
4517 7318 9.103861 GTAGAAGCTCATAAACTTGCTAGATTT 57.896 33.333 1.04 2.06 35.09 2.17
4518 7319 8.572855 AGAAGCTCATAAACTTGCTAGATTTT 57.427 30.769 1.04 0.00 35.09 1.82
4519 7320 9.018582 AGAAGCTCATAAACTTGCTAGATTTTT 57.981 29.630 1.04 0.00 35.09 1.94
4520 7321 9.283420 GAAGCTCATAAACTTGCTAGATTTTTC 57.717 33.333 1.04 0.00 35.09 2.29
4521 7322 7.766283 AGCTCATAAACTTGCTAGATTTTTCC 58.234 34.615 1.04 0.00 33.64 3.13
4522 7323 7.613411 AGCTCATAAACTTGCTAGATTTTTCCT 59.387 33.333 1.04 0.00 33.64 3.36
4523 7324 8.246871 GCTCATAAACTTGCTAGATTTTTCCTT 58.753 33.333 1.04 0.00 0.00 3.36
4526 7327 9.358872 CATAAACTTGCTAGATTTTTCCTTTCC 57.641 33.333 1.04 0.00 0.00 3.13
4527 7328 7.603180 AAACTTGCTAGATTTTTCCTTTCCT 57.397 32.000 1.04 0.00 0.00 3.36
4528 7329 7.603180 AACTTGCTAGATTTTTCCTTTCCTT 57.397 32.000 1.04 0.00 0.00 3.36
4529 7330 8.706322 AACTTGCTAGATTTTTCCTTTCCTTA 57.294 30.769 1.04 0.00 0.00 2.69
4530 7331 8.341892 ACTTGCTAGATTTTTCCTTTCCTTAG 57.658 34.615 1.04 0.00 0.00 2.18
4531 7332 8.164070 ACTTGCTAGATTTTTCCTTTCCTTAGA 58.836 33.333 1.04 0.00 0.00 2.10
4532 7333 9.183368 CTTGCTAGATTTTTCCTTTCCTTAGAT 57.817 33.333 0.00 0.00 0.00 1.98
4534 7335 9.838339 TGCTAGATTTTTCCTTTCCTTAGATAG 57.162 33.333 0.00 0.00 0.00 2.08
4535 7336 9.278978 GCTAGATTTTTCCTTTCCTTAGATAGG 57.721 37.037 0.00 0.00 46.27 2.57
4536 7337 9.785982 CTAGATTTTTCCTTTCCTTAGATAGGG 57.214 37.037 0.60 0.00 44.86 3.53
4537 7338 7.063593 AGATTTTTCCTTTCCTTAGATAGGGC 58.936 38.462 0.60 0.00 44.86 5.19
4538 7339 4.417426 TTTCCTTTCCTTAGATAGGGCG 57.583 45.455 0.60 0.00 44.86 6.13
4539 7340 1.692519 TCCTTTCCTTAGATAGGGCGC 59.307 52.381 0.00 0.00 44.86 6.53
4540 7341 1.270893 CCTTTCCTTAGATAGGGCGCC 60.271 57.143 21.18 21.18 44.86 6.53
4541 7342 1.416401 CTTTCCTTAGATAGGGCGCCA 59.584 52.381 30.85 9.36 44.86 5.69
4542 7343 1.729586 TTCCTTAGATAGGGCGCCAT 58.270 50.000 30.85 26.24 44.86 4.40
4543 7344 0.976641 TCCTTAGATAGGGCGCCATG 59.023 55.000 30.85 7.96 44.86 3.66
4544 7345 0.687354 CCTTAGATAGGGCGCCATGT 59.313 55.000 30.85 21.79 40.67 3.21
4545 7346 1.609061 CCTTAGATAGGGCGCCATGTG 60.609 57.143 30.85 7.40 40.67 3.21
4546 7347 1.070758 CTTAGATAGGGCGCCATGTGT 59.929 52.381 30.85 21.51 0.00 3.72
4547 7348 0.392706 TAGATAGGGCGCCATGTGTG 59.607 55.000 30.85 0.00 0.00 3.82
4559 7360 1.812571 CCATGTGTGGCTTACTCAACC 59.187 52.381 0.00 0.00 39.01 3.77
4560 7361 1.812571 CATGTGTGGCTTACTCAACCC 59.187 52.381 1.72 0.00 36.48 4.11
4561 7362 0.109723 TGTGTGGCTTACTCAACCCC 59.890 55.000 0.00 0.00 30.42 4.95
4562 7363 0.109723 GTGTGGCTTACTCAACCCCA 59.890 55.000 0.00 0.00 0.00 4.96
4563 7364 1.072266 TGTGGCTTACTCAACCCCAT 58.928 50.000 0.00 0.00 0.00 4.00
4564 7365 1.271871 TGTGGCTTACTCAACCCCATG 60.272 52.381 0.00 0.00 0.00 3.66
4565 7366 1.004277 GTGGCTTACTCAACCCCATGA 59.996 52.381 0.00 0.00 0.00 3.07
4566 7367 1.922447 TGGCTTACTCAACCCCATGAT 59.078 47.619 0.00 0.00 0.00 2.45
4567 7368 2.311542 TGGCTTACTCAACCCCATGATT 59.688 45.455 0.00 0.00 0.00 2.57
4568 7369 2.952310 GGCTTACTCAACCCCATGATTC 59.048 50.000 0.00 0.00 0.00 2.52
4569 7370 3.372025 GGCTTACTCAACCCCATGATTCT 60.372 47.826 0.00 0.00 0.00 2.40
4570 7371 4.273318 GCTTACTCAACCCCATGATTCTT 58.727 43.478 0.00 0.00 0.00 2.52
4571 7372 4.336713 GCTTACTCAACCCCATGATTCTTC 59.663 45.833 0.00 0.00 0.00 2.87
4572 7373 5.749462 CTTACTCAACCCCATGATTCTTCT 58.251 41.667 0.00 0.00 0.00 2.85
4573 7374 4.664688 ACTCAACCCCATGATTCTTCTT 57.335 40.909 0.00 0.00 0.00 2.52
4574 7375 4.338879 ACTCAACCCCATGATTCTTCTTG 58.661 43.478 0.00 0.00 0.00 3.02
4575 7376 4.202609 ACTCAACCCCATGATTCTTCTTGT 60.203 41.667 0.00 0.00 0.00 3.16
4576 7377 5.014123 ACTCAACCCCATGATTCTTCTTGTA 59.986 40.000 0.00 0.00 0.00 2.41
4577 7378 6.078456 TCAACCCCATGATTCTTCTTGTAT 57.922 37.500 0.00 0.00 0.00 2.29
4578 7379 6.122277 TCAACCCCATGATTCTTCTTGTATC 58.878 40.000 0.00 0.00 0.00 2.24
4579 7380 5.053978 ACCCCATGATTCTTCTTGTATCC 57.946 43.478 0.00 0.00 0.00 2.59
4580 7381 4.141158 ACCCCATGATTCTTCTTGTATCCC 60.141 45.833 0.00 0.00 0.00 3.85
4581 7382 4.141181 CCCCATGATTCTTCTTGTATCCCA 60.141 45.833 0.00 0.00 0.00 4.37
4582 7383 4.823989 CCCATGATTCTTCTTGTATCCCAC 59.176 45.833 0.00 0.00 0.00 4.61
4583 7384 5.439721 CCATGATTCTTCTTGTATCCCACA 58.560 41.667 0.00 0.00 34.51 4.17
4584 7385 5.887598 CCATGATTCTTCTTGTATCCCACAA 59.112 40.000 0.00 0.00 44.97 3.33
4585 7386 6.377996 CCATGATTCTTCTTGTATCCCACAAA 59.622 38.462 0.00 0.00 46.37 2.83
4586 7387 6.817765 TGATTCTTCTTGTATCCCACAAAC 57.182 37.500 0.00 0.00 46.37 2.93
4587 7388 6.542821 TGATTCTTCTTGTATCCCACAAACT 58.457 36.000 0.00 0.00 46.37 2.66
4588 7389 6.430925 TGATTCTTCTTGTATCCCACAAACTG 59.569 38.462 0.00 0.00 46.37 3.16
4589 7390 5.304686 TCTTCTTGTATCCCACAAACTGT 57.695 39.130 0.00 0.00 46.37 3.55
4590 7391 5.063204 TCTTCTTGTATCCCACAAACTGTG 58.937 41.667 0.00 0.00 46.37 3.66
4603 7404 6.907206 CACAAACTGTGGTTTTCAATCAAT 57.093 33.333 0.00 0.00 44.27 2.57
4605 7406 8.417780 CACAAACTGTGGTTTTCAATCAATAA 57.582 30.769 0.00 0.00 44.27 1.40
4606 7407 8.877779 CACAAACTGTGGTTTTCAATCAATAAA 58.122 29.630 0.00 0.00 44.27 1.40
4607 7408 9.097257 ACAAACTGTGGTTTTCAATCAATAAAG 57.903 29.630 0.00 0.00 42.96 1.85
4608 7409 7.713764 AACTGTGGTTTTCAATCAATAAAGC 57.286 32.000 0.00 0.00 30.55 3.51
4609 7410 7.054491 ACTGTGGTTTTCAATCAATAAAGCT 57.946 32.000 0.00 0.00 32.22 3.74
4610 7411 7.500141 ACTGTGGTTTTCAATCAATAAAGCTT 58.500 30.769 0.00 0.00 32.22 3.74
4611 7412 7.986889 ACTGTGGTTTTCAATCAATAAAGCTTT 59.013 29.630 17.30 17.30 32.22 3.51
4612 7413 8.729805 TGTGGTTTTCAATCAATAAAGCTTTT 57.270 26.923 18.47 2.49 32.22 2.27
4613 7414 8.610896 TGTGGTTTTCAATCAATAAAGCTTTTG 58.389 29.630 18.47 10.80 32.22 2.44
4661 7462 1.737236 CATACAACGCTAGGCAAAGCA 59.263 47.619 11.68 0.00 42.91 3.91
4667 7468 1.031571 CGCTAGGCAAAGCAATCCCA 61.032 55.000 11.68 0.00 42.91 4.37
4669 7470 1.134995 GCTAGGCAAAGCAATCCCAAC 60.135 52.381 6.95 0.00 42.30 3.77
4670 7471 2.170166 CTAGGCAAAGCAATCCCAACA 58.830 47.619 0.00 0.00 0.00 3.33
4672 7473 1.345415 AGGCAAAGCAATCCCAACAAG 59.655 47.619 0.00 0.00 0.00 3.16
4681 8107 0.681175 ATCCCAACAAGGCAACAAGC 59.319 50.000 0.00 0.00 44.65 4.01
4699 8125 1.644786 GCCAACAACCGATCGAAGGG 61.645 60.000 18.66 9.95 0.00 3.95
4735 8161 2.264794 GACGAGGACAATGGCGGT 59.735 61.111 0.00 0.00 0.00 5.68
4740 8166 3.443045 GGACAATGGCGGTGCAGG 61.443 66.667 0.00 0.00 0.00 4.85
4774 8200 0.470080 AGGAGGCTTGGCTATCGCTA 60.470 55.000 0.00 0.00 36.09 4.26
4793 8222 2.762535 AAGGGACATCAACGGTACTG 57.237 50.000 0.00 0.00 0.00 2.74
4797 8226 2.000447 GGACATCAACGGTACTGCTTC 59.000 52.381 0.23 0.00 0.00 3.86
4807 8236 1.673920 GGTACTGCTTCCTCTCTCTCG 59.326 57.143 0.00 0.00 0.00 4.04
4815 8246 0.470766 TCCTCTCTCTCGCTCCTACC 59.529 60.000 0.00 0.00 0.00 3.18
4831 8262 5.174037 TCCTACCTTTGGATCAAATCGTT 57.826 39.130 0.00 0.00 32.70 3.85
4840 8271 8.405531 CCTTTGGATCAAATCGTTGTATGTATT 58.594 33.333 0.00 0.00 36.07 1.89
4841 8272 9.787532 CTTTGGATCAAATCGTTGTATGTATTT 57.212 29.630 0.00 0.00 36.07 1.40
4842 8273 9.781834 TTTGGATCAAATCGTTGTATGTATTTC 57.218 29.630 0.00 0.00 36.07 2.17
4843 8274 7.925993 TGGATCAAATCGTTGTATGTATTTCC 58.074 34.615 0.00 0.00 36.07 3.13
4844 8275 7.773224 TGGATCAAATCGTTGTATGTATTTCCT 59.227 33.333 0.00 0.00 36.07 3.36
4845 8276 8.283291 GGATCAAATCGTTGTATGTATTTCCTC 58.717 37.037 0.00 0.00 36.07 3.71
4846 8277 7.548196 TCAAATCGTTGTATGTATTTCCTCC 57.452 36.000 0.00 0.00 36.07 4.30
4847 8278 6.256975 TCAAATCGTTGTATGTATTTCCTCCG 59.743 38.462 0.00 0.00 36.07 4.63
4848 8279 4.724074 TCGTTGTATGTATTTCCTCCGT 57.276 40.909 0.00 0.00 0.00 4.69
4849 8280 5.075858 TCGTTGTATGTATTTCCTCCGTT 57.924 39.130 0.00 0.00 0.00 4.44
4850 8281 5.481105 TCGTTGTATGTATTTCCTCCGTTT 58.519 37.500 0.00 0.00 0.00 3.60
4851 8282 5.577945 TCGTTGTATGTATTTCCTCCGTTTC 59.422 40.000 0.00 0.00 0.00 2.78
4852 8283 5.349270 CGTTGTATGTATTTCCTCCGTTTCA 59.651 40.000 0.00 0.00 0.00 2.69
4853 8284 6.128499 CGTTGTATGTATTTCCTCCGTTTCAA 60.128 38.462 0.00 0.00 0.00 2.69
4854 8285 7.571613 CGTTGTATGTATTTCCTCCGTTTCAAA 60.572 37.037 0.00 0.00 0.00 2.69
4855 8286 7.931578 TGTATGTATTTCCTCCGTTTCAAAT 57.068 32.000 0.00 0.00 0.00 2.32
4856 8287 8.343168 TGTATGTATTTCCTCCGTTTCAAATT 57.657 30.769 0.00 0.00 0.00 1.82
4857 8288 9.451002 TGTATGTATTTCCTCCGTTTCAAATTA 57.549 29.630 0.00 0.00 0.00 1.40
4858 8289 9.712359 GTATGTATTTCCTCCGTTTCAAATTAC 57.288 33.333 0.00 0.00 0.00 1.89
4859 8290 7.989416 TGTATTTCCTCCGTTTCAAATTACT 57.011 32.000 0.00 0.00 0.00 2.24
4860 8291 8.036273 TGTATTTCCTCCGTTTCAAATTACTC 57.964 34.615 0.00 0.00 0.00 2.59
4861 8292 5.600908 TTTCCTCCGTTTCAAATTACTCG 57.399 39.130 0.00 0.00 0.00 4.18
4862 8293 4.261578 TCCTCCGTTTCAAATTACTCGT 57.738 40.909 0.00 0.00 0.00 4.18
4863 8294 4.240096 TCCTCCGTTTCAAATTACTCGTC 58.760 43.478 0.00 0.00 0.00 4.20
4864 8295 3.370061 CCTCCGTTTCAAATTACTCGTCC 59.630 47.826 0.00 0.00 0.00 4.79
4865 8296 3.328505 TCCGTTTCAAATTACTCGTCCC 58.671 45.455 0.00 0.00 0.00 4.46
4866 8297 3.007182 TCCGTTTCAAATTACTCGTCCCT 59.993 43.478 0.00 0.00 0.00 4.20
4867 8298 3.124636 CCGTTTCAAATTACTCGTCCCTG 59.875 47.826 0.00 0.00 0.00 4.45
4868 8299 3.991773 CGTTTCAAATTACTCGTCCCTGA 59.008 43.478 0.00 0.00 0.00 3.86
4869 8300 4.449743 CGTTTCAAATTACTCGTCCCTGAA 59.550 41.667 0.00 0.00 0.00 3.02
4870 8301 5.049954 CGTTTCAAATTACTCGTCCCTGAAA 60.050 40.000 0.00 0.00 0.00 2.69
4871 8302 6.348213 CGTTTCAAATTACTCGTCCCTGAAAT 60.348 38.462 0.00 0.00 34.78 2.17
4872 8303 6.494893 TTCAAATTACTCGTCCCTGAAATG 57.505 37.500 0.00 0.00 0.00 2.32
4873 8304 4.941263 TCAAATTACTCGTCCCTGAAATGG 59.059 41.667 0.00 0.00 0.00 3.16
4874 8305 4.837093 AATTACTCGTCCCTGAAATGGA 57.163 40.909 0.00 0.00 0.00 3.41
4875 8306 5.373812 AATTACTCGTCCCTGAAATGGAT 57.626 39.130 0.00 0.00 31.66 3.41
4876 8307 2.698855 ACTCGTCCCTGAAATGGATG 57.301 50.000 0.00 0.00 38.81 3.51
4877 8308 1.909302 ACTCGTCCCTGAAATGGATGT 59.091 47.619 0.00 0.00 38.60 3.06
4878 8309 3.104512 ACTCGTCCCTGAAATGGATGTA 58.895 45.455 0.00 0.00 38.60 2.29
4879 8310 3.711704 ACTCGTCCCTGAAATGGATGTAT 59.288 43.478 0.00 0.00 38.60 2.29
4880 8311 4.202264 ACTCGTCCCTGAAATGGATGTATC 60.202 45.833 0.00 0.00 38.60 2.24
4881 8312 3.967326 TCGTCCCTGAAATGGATGTATCT 59.033 43.478 0.00 0.00 38.60 1.98
4882 8313 5.144832 TCGTCCCTGAAATGGATGTATCTA 58.855 41.667 0.00 0.00 38.60 1.98
4883 8314 5.243954 TCGTCCCTGAAATGGATGTATCTAG 59.756 44.000 0.00 0.00 38.60 2.43
4884 8315 5.243954 CGTCCCTGAAATGGATGTATCTAGA 59.756 44.000 0.00 0.00 33.49 2.43
4885 8316 6.239317 CGTCCCTGAAATGGATGTATCTAGAA 60.239 42.308 0.00 0.00 33.49 2.10
4886 8317 6.931840 GTCCCTGAAATGGATGTATCTAGAAC 59.068 42.308 0.00 0.00 31.66 3.01
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
31 32 9.317936 GAAATTTCCATTTCTATTGGGTCATTC 57.682 33.333 6.95 0.00 43.56 2.67
34 35 7.789202 TGAAATTTCCATTTCTATTGGGTCA 57.211 32.000 15.48 0.00 46.06 4.02
47 48 8.917088 CAAGGGTGATAGTATTGAAATTTCCAT 58.083 33.333 15.48 12.29 0.00 3.41
78 79 1.078497 CACCGCCATCACTAGCCAA 60.078 57.895 0.00 0.00 0.00 4.52
156 161 3.727673 GCCACAACGCTTATACACACATG 60.728 47.826 0.00 0.00 0.00 3.21
210 215 4.210328 CGCCGATACATAGTGCAACATAAA 59.790 41.667 0.00 0.00 41.43 1.40
225 230 1.373497 CCATGAGAGCCGCCGATAC 60.373 63.158 0.00 0.00 0.00 2.24
230 235 2.030262 CTAGCCATGAGAGCCGCC 59.970 66.667 0.00 0.00 0.00 6.13
232 237 2.355599 CGCTAGCCATGAGAGCCG 60.356 66.667 9.66 0.00 32.35 5.52
240 245 1.763968 TCACAGTAGACGCTAGCCAT 58.236 50.000 9.66 0.00 0.00 4.40
246 251 1.465387 CGAGACTTCACAGTAGACGCT 59.535 52.381 0.00 0.00 31.22 5.07
254 259 4.768130 TCTAGGAAACGAGACTTCACAG 57.232 45.455 0.00 0.00 37.15 3.66
266 271 4.156739 CCATGGAGCAAAGTTCTAGGAAAC 59.843 45.833 5.56 0.00 0.00 2.78
281 286 4.899239 CTCGCCGGACCATGGAGC 62.899 72.222 21.47 14.18 0.00 4.70
294 299 2.435059 GAGTGGTTCCAGCCTCGC 60.435 66.667 0.00 0.00 0.00 5.03
314 319 2.578714 GGCTCGCCCTCTAGGATGG 61.579 68.421 0.00 0.00 38.24 3.51
396 429 3.088532 GCAACATCCAACACTCCCATTA 58.911 45.455 0.00 0.00 0.00 1.90
447 480 2.514510 TACCAGCATCGCCGCTCAAA 62.515 55.000 0.00 0.00 41.38 2.69
459 492 8.982723 AGAAGAAAATAAGATAGAGTACCAGCA 58.017 33.333 0.00 0.00 0.00 4.41
476 509 9.654663 GTAGGTGTGAACTACATAGAAGAAAAT 57.345 33.333 0.00 0.00 42.24 1.82
527 595 5.535783 TCATTGATCACAACATCCAACACTT 59.464 36.000 0.00 0.00 38.90 3.16
555 623 4.177026 CTCAAGACTAATGACTGGTTCCG 58.823 47.826 0.00 0.00 0.00 4.30
563 631 0.924090 CGCCGCTCAAGACTAATGAC 59.076 55.000 0.00 0.00 0.00 3.06
595 663 3.186613 GCACCGTAGAAGAAAACAAGAGG 59.813 47.826 0.00 0.00 0.00 3.69
912 980 3.129988 CGGTACTACTACTTCCACCCAAG 59.870 52.174 0.00 0.00 0.00 3.61
913 981 3.091545 CGGTACTACTACTTCCACCCAA 58.908 50.000 0.00 0.00 0.00 4.12
914 982 2.041620 ACGGTACTACTACTTCCACCCA 59.958 50.000 0.00 0.00 0.00 4.51
917 1011 4.013050 AGGAACGGTACTACTACTTCCAC 58.987 47.826 0.00 0.00 32.86 4.02
932 1026 1.257743 TCTGTTCTCAGGAGGAACGG 58.742 55.000 8.57 8.57 45.91 4.44
941 1036 2.797156 CACGTGTTCCTTCTGTTCTCAG 59.203 50.000 7.58 0.00 42.54 3.35
976 1071 3.478724 TATGTAGAGCCGCGCGGTG 62.479 63.158 45.02 25.31 37.65 4.94
977 1072 3.214123 TATGTAGAGCCGCGCGGT 61.214 61.111 45.02 32.89 37.65 5.68
1022 1117 3.572255 GGAGTCTCTTGATCGGCTTATCT 59.428 47.826 0.00 0.00 0.00 1.98
1026 1121 0.827368 GGGAGTCTCTTGATCGGCTT 59.173 55.000 0.00 0.00 0.00 4.35
1041 1136 0.250513 CTCCGGAACTGGAAAGGGAG 59.749 60.000 5.23 0.00 37.64 4.30
1070 1165 3.902063 CGCGTGACTTCATCGCCG 61.902 66.667 15.63 9.97 40.53 6.46
1320 1442 1.901085 CTCCCCGGGAGTCTTCTTG 59.099 63.158 26.32 0.57 44.25 3.02
1347 1469 0.530211 CTGCCTTGATCTCCTGCTCG 60.530 60.000 0.00 0.00 0.00 5.03
1502 1633 9.428097 GCAAAAACTAAATCTGGATCTGAAAAT 57.572 29.630 0.00 0.00 0.00 1.82
1518 1649 5.423015 TGCAAACATGAAGGCAAAAACTAA 58.577 33.333 0.00 0.00 32.54 2.24
1520 1651 3.871485 TGCAAACATGAAGGCAAAAACT 58.129 36.364 0.00 0.00 32.54 2.66
1521 1652 4.816786 ATGCAAACATGAAGGCAAAAAC 57.183 36.364 0.00 0.00 40.02 2.43
1560 1691 3.935203 CACAGCGGAAGTGTGAAAGATAT 59.065 43.478 0.00 0.00 46.99 1.63
1575 1706 3.730769 CAAACAAACAAAAACACAGCGG 58.269 40.909 0.00 0.00 0.00 5.52
1638 1771 2.409975 GTAGCCACGTCAGTTAGCAAA 58.590 47.619 0.00 0.00 31.37 3.68
1639 1772 1.667756 CGTAGCCACGTCAGTTAGCAA 60.668 52.381 0.00 0.00 43.31 3.91
1659 1793 1.426621 CATGCATGTCGTGGAGTGC 59.573 57.895 18.91 0.00 38.05 4.40
1660 1794 1.300266 TGCATGCATGTCGTGGAGTG 61.300 55.000 26.79 0.05 32.31 3.51
1701 1839 2.224606 CACCAGCAAGTGATGAAGTGT 58.775 47.619 0.00 0.00 40.34 3.55
1702 1840 2.224606 ACACCAGCAAGTGATGAAGTG 58.775 47.619 12.54 1.65 40.34 3.16
1719 1861 0.526662 AGACAGCTGGTACGCTACAC 59.473 55.000 19.93 0.00 36.56 2.90
1720 1862 0.526211 CAGACAGCTGGTACGCTACA 59.474 55.000 19.93 0.00 38.51 2.74
1721 1863 0.526662 ACAGACAGCTGGTACGCTAC 59.473 55.000 19.93 0.00 46.60 3.58
1722 1864 1.254026 AACAGACAGCTGGTACGCTA 58.746 50.000 19.93 0.00 46.60 4.26
1723 1865 0.393077 AAACAGACAGCTGGTACGCT 59.607 50.000 19.93 4.13 42.49 5.07
1724 1866 0.512952 CAAACAGACAGCTGGTACGC 59.487 55.000 19.93 1.69 42.49 4.42
1750 1892 9.694137 CTTATATTTAGGAACGGAGGAAGTAAG 57.306 37.037 0.00 0.00 0.00 2.34
1751 1893 9.205513 ACTTATATTTAGGAACGGAGGAAGTAA 57.794 33.333 0.00 0.00 0.00 2.24
1754 1896 7.953752 AGACTTATATTTAGGAACGGAGGAAG 58.046 38.462 0.00 0.00 0.00 3.46
1755 1897 7.909485 AGACTTATATTTAGGAACGGAGGAA 57.091 36.000 0.00 0.00 0.00 3.36
1756 1898 7.909485 AAGACTTATATTTAGGAACGGAGGA 57.091 36.000 0.00 0.00 0.00 3.71
1757 1899 8.959705 AAAAGACTTATATTTAGGAACGGAGG 57.040 34.615 0.00 0.00 0.00 4.30
1833 1975 7.352739 ACGAAACAAAATGAGTGAATCTACAC 58.647 34.615 0.00 0.00 40.60 2.90
1834 1976 7.490962 ACGAAACAAAATGAGTGAATCTACA 57.509 32.000 0.00 0.00 0.00 2.74
1835 1977 9.478019 CATACGAAACAAAATGAGTGAATCTAC 57.522 33.333 0.00 0.00 0.00 2.59
1836 1978 9.214957 ACATACGAAACAAAATGAGTGAATCTA 57.785 29.630 0.00 0.00 0.00 1.98
1837 1979 8.099364 ACATACGAAACAAAATGAGTGAATCT 57.901 30.769 0.00 0.00 0.00 2.40
1838 1980 9.478019 CTACATACGAAACAAAATGAGTGAATC 57.522 33.333 0.00 0.00 0.00 2.52
1839 1981 8.999431 ACTACATACGAAACAAAATGAGTGAAT 58.001 29.630 0.00 0.00 0.00 2.57
1840 1982 8.373048 ACTACATACGAAACAAAATGAGTGAA 57.627 30.769 0.00 0.00 0.00 3.18
1841 1983 7.956420 ACTACATACGAAACAAAATGAGTGA 57.044 32.000 0.00 0.00 0.00 3.41
1842 1984 8.279800 TGAACTACATACGAAACAAAATGAGTG 58.720 33.333 0.00 0.00 0.00 3.51
1843 1985 8.373048 TGAACTACATACGAAACAAAATGAGT 57.627 30.769 0.00 0.00 0.00 3.41
1886 2028 9.453830 ACTCCCTCCATTTCTAAATATAAGTCT 57.546 33.333 0.00 0.00 0.00 3.24
1894 2036 8.949421 ACATACATACTCCCTCCATTTCTAAAT 58.051 33.333 0.00 0.00 0.00 1.40
1895 2037 8.331931 ACATACATACTCCCTCCATTTCTAAA 57.668 34.615 0.00 0.00 0.00 1.85
1896 2038 7.931015 ACATACATACTCCCTCCATTTCTAA 57.069 36.000 0.00 0.00 0.00 2.10
1897 2039 9.035890 CATACATACATACTCCCTCCATTTCTA 57.964 37.037 0.00 0.00 0.00 2.10
1898 2040 7.527868 GCATACATACATACTCCCTCCATTTCT 60.528 40.741 0.00 0.00 0.00 2.52
1899 2041 6.595716 GCATACATACATACTCCCTCCATTTC 59.404 42.308 0.00 0.00 0.00 2.17
1900 2042 6.044287 TGCATACATACATACTCCCTCCATTT 59.956 38.462 0.00 0.00 0.00 2.32
1901 2043 5.547666 TGCATACATACATACTCCCTCCATT 59.452 40.000 0.00 0.00 0.00 3.16
1902 2044 5.046304 GTGCATACATACATACTCCCTCCAT 60.046 44.000 0.00 0.00 0.00 3.41
1903 2045 4.283467 GTGCATACATACATACTCCCTCCA 59.717 45.833 0.00 0.00 0.00 3.86
1904 2046 4.283467 TGTGCATACATACATACTCCCTCC 59.717 45.833 0.00 0.00 0.00 4.30
1905 2047 5.468540 TGTGCATACATACATACTCCCTC 57.531 43.478 0.00 0.00 0.00 4.30
1906 2048 5.307976 ACATGTGCATACATACATACTCCCT 59.692 40.000 0.00 0.00 45.53 4.20
1907 2049 5.551233 ACATGTGCATACATACATACTCCC 58.449 41.667 0.00 0.00 45.53 4.30
1908 2050 6.891624 CAACATGTGCATACATACATACTCC 58.108 40.000 0.00 0.00 45.53 3.85
1945 2093 1.014044 CGGAGCTGCACATTGTACGT 61.014 55.000 5.91 0.00 0.00 3.57
1947 2095 1.328680 CATCGGAGCTGCACATTGTAC 59.671 52.381 5.91 0.00 0.00 2.90
2018 2166 0.396435 AGGCGATCTTGTTCCACACA 59.604 50.000 0.00 0.00 0.00 3.72
2063 2211 4.457496 AGATGGCGCCAGTGGACG 62.457 66.667 35.36 17.00 0.00 4.79
2102 2250 2.942376 GCCATTGATGTCGTACCATTGA 59.058 45.455 0.00 0.00 0.00 2.57
2168 2316 1.292223 GTTGCCCGTGTAGAGCAGA 59.708 57.895 0.00 0.00 37.89 4.26
2192 2340 2.352715 GCATTGTACCTGGGCAAAAGTC 60.353 50.000 9.41 1.51 0.00 3.01
2195 2343 0.972883 GGCATTGTACCTGGGCAAAA 59.027 50.000 9.41 0.00 0.00 2.44
2414 2562 7.599171 TGATGAAGTCTTTCGTCTTGTACATA 58.401 34.615 0.00 0.00 45.54 2.29
2465 2613 3.986006 GTGCCCTCGACACGGTGA 61.986 66.667 16.29 0.00 0.00 4.02
2535 2683 3.487372 TCACGTATATCACCTCCTCTGG 58.513 50.000 0.00 0.00 0.00 3.86
2594 2742 0.107703 CATGAAACCTCCCTAGCGCA 60.108 55.000 11.47 0.00 0.00 6.09
2600 2748 0.622665 CCTCTGCATGAAACCTCCCT 59.377 55.000 0.00 0.00 0.00 4.20
2610 2758 1.303888 ACCTGTTGGCCTCTGCATG 60.304 57.895 3.32 0.00 40.13 4.06
2637 2785 1.274703 ACATCAGCTTCCGGGTCCAT 61.275 55.000 0.00 0.00 0.00 3.41
3017 3311 8.861086 TCCTTAATTATTTTGTGTGGTTAGCAA 58.139 29.630 0.00 0.00 0.00 3.91
3018 3312 8.301002 GTCCTTAATTATTTTGTGTGGTTAGCA 58.699 33.333 0.00 0.00 0.00 3.49
3128 3577 2.343246 CACAACGATGAATGCACATTGC 59.657 45.455 0.00 0.00 45.29 3.56
3230 3688 1.463444 GATGTTCGTCCGGGTTTTCTG 59.537 52.381 0.00 0.00 0.00 3.02
3527 3988 7.569639 TGTAAATGTAAAAGTACACTGCCAA 57.430 32.000 0.00 0.00 42.99 4.52
3751 4212 2.338809 TGGATGGCCTTCATAGGGTAG 58.661 52.381 19.49 0.00 42.25 3.18
3817 4278 3.325816 GAGCTTCTCGACGGTAACC 57.674 57.895 0.00 0.00 0.00 2.85
3913 4374 9.883142 TCCATCTTAAAGAACAAAAACATGTTT 57.117 25.926 18.13 18.13 43.31 2.83
3916 4383 9.918630 AGATCCATCTTAAAGAACAAAAACATG 57.081 29.630 0.00 0.00 31.97 3.21
3997 4466 4.707030 TGAAATCTGCTGCATAAAGGTG 57.293 40.909 1.31 0.00 0.00 4.00
4049 4518 9.571810 GTCAAGATGATGCACAAAATGTATTAA 57.428 29.630 0.00 0.00 33.14 1.40
4050 4519 8.190122 GGTCAAGATGATGCACAAAATGTATTA 58.810 33.333 0.00 0.00 33.14 0.98
4051 4520 7.037438 GGTCAAGATGATGCACAAAATGTATT 58.963 34.615 0.00 0.00 33.14 1.89
4052 4521 6.406177 GGGTCAAGATGATGCACAAAATGTAT 60.406 38.462 0.00 0.00 36.15 2.29
4053 4522 5.105797 GGGTCAAGATGATGCACAAAATGTA 60.106 40.000 0.00 0.00 0.00 2.29
4054 4523 4.322198 GGGTCAAGATGATGCACAAAATGT 60.322 41.667 0.00 0.00 0.00 2.71
4055 4524 4.178540 GGGTCAAGATGATGCACAAAATG 58.821 43.478 0.00 0.00 0.00 2.32
4056 4525 3.119388 CGGGTCAAGATGATGCACAAAAT 60.119 43.478 0.00 0.00 0.00 1.82
4057 4526 2.228582 CGGGTCAAGATGATGCACAAAA 59.771 45.455 0.00 0.00 0.00 2.44
4058 4527 1.811965 CGGGTCAAGATGATGCACAAA 59.188 47.619 0.00 0.00 0.00 2.83
4059 4528 1.003003 TCGGGTCAAGATGATGCACAA 59.997 47.619 0.00 0.00 0.00 3.33
4060 4529 0.612744 TCGGGTCAAGATGATGCACA 59.387 50.000 0.00 0.00 0.00 4.57
4061 4530 1.667724 CTTCGGGTCAAGATGATGCAC 59.332 52.381 0.00 0.00 0.00 4.57
4062 4531 1.554617 TCTTCGGGTCAAGATGATGCA 59.445 47.619 0.00 0.00 0.00 3.96
4063 4532 1.936547 GTCTTCGGGTCAAGATGATGC 59.063 52.381 0.00 0.00 34.86 3.91
4064 4533 3.118992 TCTGTCTTCGGGTCAAGATGATG 60.119 47.826 0.00 0.00 34.86 3.07
4065 4534 3.099905 TCTGTCTTCGGGTCAAGATGAT 58.900 45.455 0.00 0.00 34.86 2.45
4066 4535 2.493675 CTCTGTCTTCGGGTCAAGATGA 59.506 50.000 0.00 0.00 34.86 2.92
4067 4536 2.232452 ACTCTGTCTTCGGGTCAAGATG 59.768 50.000 0.00 0.00 34.86 2.90
4068 4537 2.530701 ACTCTGTCTTCGGGTCAAGAT 58.469 47.619 0.00 0.00 34.86 2.40
4069 4538 1.996798 ACTCTGTCTTCGGGTCAAGA 58.003 50.000 0.00 0.00 0.00 3.02
4070 4539 2.821991 AACTCTGTCTTCGGGTCAAG 57.178 50.000 0.00 0.00 0.00 3.02
4071 4540 4.675976 TTTAACTCTGTCTTCGGGTCAA 57.324 40.909 0.00 0.00 0.00 3.18
4072 4541 4.675976 TTTTAACTCTGTCTTCGGGTCA 57.324 40.909 0.00 0.00 0.00 4.02
4115 4584 7.430760 AAGGACATAGAAGCTGAGAAGTATT 57.569 36.000 0.00 0.00 0.00 1.89
4116 4585 7.430760 AAAGGACATAGAAGCTGAGAAGTAT 57.569 36.000 0.00 0.00 0.00 2.12
4117 4586 6.859112 AAAGGACATAGAAGCTGAGAAGTA 57.141 37.500 0.00 0.00 0.00 2.24
4118 4587 5.753721 AAAGGACATAGAAGCTGAGAAGT 57.246 39.130 0.00 0.00 0.00 3.01
4119 4588 8.610896 CATAAAAAGGACATAGAAGCTGAGAAG 58.389 37.037 0.00 0.00 0.00 2.85
4120 4589 8.321353 TCATAAAAAGGACATAGAAGCTGAGAA 58.679 33.333 0.00 0.00 0.00 2.87
4121 4590 7.851228 TCATAAAAAGGACATAGAAGCTGAGA 58.149 34.615 0.00 0.00 0.00 3.27
4122 4591 8.674263 ATCATAAAAAGGACATAGAAGCTGAG 57.326 34.615 0.00 0.00 0.00 3.35
4123 4592 9.466497 AAATCATAAAAAGGACATAGAAGCTGA 57.534 29.630 0.00 0.00 0.00 4.26
4136 4605 9.810231 CCGAAAACATGAAAAATCATAAAAAGG 57.190 29.630 0.00 0.00 0.00 3.11
4137 4606 9.316859 GCCGAAAACATGAAAAATCATAAAAAG 57.683 29.630 0.00 0.00 0.00 2.27
4138 4607 8.830580 TGCCGAAAACATGAAAAATCATAAAAA 58.169 25.926 0.00 0.00 0.00 1.94
4139 4608 8.370493 TGCCGAAAACATGAAAAATCATAAAA 57.630 26.923 0.00 0.00 0.00 1.52
4140 4609 7.655328 ACTGCCGAAAACATGAAAAATCATAAA 59.345 29.630 0.00 0.00 0.00 1.40
4141 4610 7.151308 ACTGCCGAAAACATGAAAAATCATAA 58.849 30.769 0.00 0.00 0.00 1.90
4142 4611 6.686630 ACTGCCGAAAACATGAAAAATCATA 58.313 32.000 0.00 0.00 0.00 2.15
4143 4612 5.540911 ACTGCCGAAAACATGAAAAATCAT 58.459 33.333 0.00 0.00 0.00 2.45
4144 4613 4.942852 ACTGCCGAAAACATGAAAAATCA 58.057 34.783 0.00 0.00 0.00 2.57
4145 4614 5.905480 AACTGCCGAAAACATGAAAAATC 57.095 34.783 0.00 0.00 0.00 2.17
4146 4615 7.655328 TCATAAACTGCCGAAAACATGAAAAAT 59.345 29.630 0.00 0.00 0.00 1.82
4147 4616 6.980978 TCATAAACTGCCGAAAACATGAAAAA 59.019 30.769 0.00 0.00 0.00 1.94
4148 4617 6.507900 TCATAAACTGCCGAAAACATGAAAA 58.492 32.000 0.00 0.00 0.00 2.29
4149 4618 6.078202 TCATAAACTGCCGAAAACATGAAA 57.922 33.333 0.00 0.00 0.00 2.69
4150 4619 5.240623 ACTCATAAACTGCCGAAAACATGAA 59.759 36.000 0.00 0.00 0.00 2.57
4151 4620 4.759693 ACTCATAAACTGCCGAAAACATGA 59.240 37.500 0.00 0.00 0.00 3.07
4152 4621 5.046910 ACTCATAAACTGCCGAAAACATG 57.953 39.130 0.00 0.00 0.00 3.21
4153 4622 5.705609 AACTCATAAACTGCCGAAAACAT 57.294 34.783 0.00 0.00 0.00 2.71
4154 4623 5.508200 AAACTCATAAACTGCCGAAAACA 57.492 34.783 0.00 0.00 0.00 2.83
4155 4624 5.974751 TCAAAACTCATAAACTGCCGAAAAC 59.025 36.000 0.00 0.00 0.00 2.43
4156 4625 6.137794 TCAAAACTCATAAACTGCCGAAAA 57.862 33.333 0.00 0.00 0.00 2.29
4157 4626 5.759506 TCAAAACTCATAAACTGCCGAAA 57.240 34.783 0.00 0.00 0.00 3.46
4158 4627 5.957842 ATCAAAACTCATAAACTGCCGAA 57.042 34.783 0.00 0.00 0.00 4.30
4159 4628 5.471797 TCAATCAAAACTCATAAACTGCCGA 59.528 36.000 0.00 0.00 0.00 5.54
4160 4629 5.698832 TCAATCAAAACTCATAAACTGCCG 58.301 37.500 0.00 0.00 0.00 5.69
4161 4630 6.681777 ACTCAATCAAAACTCATAAACTGCC 58.318 36.000 0.00 0.00 0.00 4.85
4162 4631 8.721478 TCTACTCAATCAAAACTCATAAACTGC 58.279 33.333 0.00 0.00 0.00 4.40
4167 4636 9.587772 GCTAGTCTACTCAATCAAAACTCATAA 57.412 33.333 0.00 0.00 0.00 1.90
4168 4637 8.749354 TGCTAGTCTACTCAATCAAAACTCATA 58.251 33.333 0.00 0.00 0.00 2.15
4169 4638 7.615403 TGCTAGTCTACTCAATCAAAACTCAT 58.385 34.615 0.00 0.00 0.00 2.90
4170 4639 6.993079 TGCTAGTCTACTCAATCAAAACTCA 58.007 36.000 0.00 0.00 0.00 3.41
4171 4640 8.485976 AATGCTAGTCTACTCAATCAAAACTC 57.514 34.615 0.00 0.00 0.00 3.01
4172 4641 8.725148 CAAATGCTAGTCTACTCAATCAAAACT 58.275 33.333 0.00 0.00 0.00 2.66
4173 4642 8.507249 ACAAATGCTAGTCTACTCAATCAAAAC 58.493 33.333 0.00 0.00 0.00 2.43
4174 4643 8.621532 ACAAATGCTAGTCTACTCAATCAAAA 57.378 30.769 0.00 0.00 0.00 2.44
4175 4644 9.151471 GTACAAATGCTAGTCTACTCAATCAAA 57.849 33.333 0.00 0.00 0.00 2.69
4176 4645 7.488150 CGTACAAATGCTAGTCTACTCAATCAA 59.512 37.037 0.00 0.00 0.00 2.57
4177 4646 6.972901 CGTACAAATGCTAGTCTACTCAATCA 59.027 38.462 0.00 0.00 0.00 2.57
4178 4647 6.973474 ACGTACAAATGCTAGTCTACTCAATC 59.027 38.462 0.00 0.00 0.00 2.67
4179 4648 6.864342 ACGTACAAATGCTAGTCTACTCAAT 58.136 36.000 0.00 0.00 0.00 2.57
4180 4649 6.263516 ACGTACAAATGCTAGTCTACTCAA 57.736 37.500 0.00 0.00 0.00 3.02
4181 4650 5.892160 ACGTACAAATGCTAGTCTACTCA 57.108 39.130 0.00 0.00 0.00 3.41
4182 4651 8.853469 AATTACGTACAAATGCTAGTCTACTC 57.147 34.615 0.00 0.00 0.00 2.59
4183 4652 9.649167 AAAATTACGTACAAATGCTAGTCTACT 57.351 29.630 0.00 0.00 0.00 2.57
4208 4677 4.303282 GGCGAACATTTAAGCTCCAAAAA 58.697 39.130 0.00 0.00 0.00 1.94
4209 4678 3.305744 GGGCGAACATTTAAGCTCCAAAA 60.306 43.478 0.00 0.00 0.00 2.44
4210 4679 2.230266 GGGCGAACATTTAAGCTCCAAA 59.770 45.455 0.00 0.00 0.00 3.28
4211 4680 1.816224 GGGCGAACATTTAAGCTCCAA 59.184 47.619 0.00 0.00 0.00 3.53
4212 4681 1.459450 GGGCGAACATTTAAGCTCCA 58.541 50.000 0.00 0.00 0.00 3.86
4213 4682 0.738975 GGGGCGAACATTTAAGCTCC 59.261 55.000 0.00 0.00 43.59 4.70
4214 4683 0.377203 CGGGGCGAACATTTAAGCTC 59.623 55.000 0.00 0.00 0.00 4.09
4215 4684 1.029947 CCGGGGCGAACATTTAAGCT 61.030 55.000 0.00 0.00 0.00 3.74
4216 4685 1.431845 CCGGGGCGAACATTTAAGC 59.568 57.895 0.00 0.00 0.00 3.09
4217 4686 1.431845 GCCGGGGCGAACATTTAAG 59.568 57.895 2.18 0.00 0.00 1.85
4218 4687 3.593318 GCCGGGGCGAACATTTAA 58.407 55.556 2.18 0.00 0.00 1.52
4228 4697 3.600898 AACTGTAGTTCGCCGGGGC 62.601 63.158 14.85 0.00 31.64 5.80
4229 4698 1.447314 GAACTGTAGTTCGCCGGGG 60.447 63.158 13.31 13.31 43.97 5.73
4230 4699 4.180496 GAACTGTAGTTCGCCGGG 57.820 61.111 2.18 0.00 43.97 5.73
4237 4706 1.272769 GCGGACCTGAGAACTGTAGTT 59.727 52.381 0.00 0.00 41.64 2.24
4238 4707 0.889306 GCGGACCTGAGAACTGTAGT 59.111 55.000 0.00 0.00 0.00 2.73
4239 4708 0.888619 TGCGGACCTGAGAACTGTAG 59.111 55.000 0.00 0.00 0.00 2.74
4240 4709 0.888619 CTGCGGACCTGAGAACTGTA 59.111 55.000 0.00 0.00 0.00 2.74
4241 4710 1.668294 CTGCGGACCTGAGAACTGT 59.332 57.895 0.00 0.00 0.00 3.55
4242 4711 1.739562 GCTGCGGACCTGAGAACTG 60.740 63.158 0.00 0.00 0.00 3.16
4243 4712 1.910772 AGCTGCGGACCTGAGAACT 60.911 57.895 0.00 0.00 0.00 3.01
4244 4713 1.739562 CAGCTGCGGACCTGAGAAC 60.740 63.158 0.00 0.00 0.00 3.01
4245 4714 2.659016 CAGCTGCGGACCTGAGAA 59.341 61.111 0.00 0.00 0.00 2.87
4246 4715 3.385384 CCAGCTGCGGACCTGAGA 61.385 66.667 8.66 0.00 0.00 3.27
4247 4716 3.655810 GACCAGCTGCGGACCTGAG 62.656 68.421 8.66 0.00 0.00 3.35
4248 4717 3.695606 GACCAGCTGCGGACCTGA 61.696 66.667 8.66 0.00 0.00 3.86
4249 4718 3.699894 AGACCAGCTGCGGACCTG 61.700 66.667 8.66 0.00 0.00 4.00
4250 4719 3.699894 CAGACCAGCTGCGGACCT 61.700 66.667 8.66 9.71 37.90 3.85
4259 4728 0.453390 GCATAAAGGTGCAGACCAGC 59.547 55.000 0.00 0.00 45.98 4.85
4267 4736 3.515330 AAATCTGCTGCATAAAGGTGC 57.485 42.857 1.31 0.00 45.25 5.01
4268 4737 9.754382 AATAATTAAATCTGCTGCATAAAGGTG 57.246 29.630 1.31 0.00 0.00 4.00
4336 4805 9.150348 CCCAGCAATCTATTTTATTTTCGTTTT 57.850 29.630 0.00 0.00 0.00 2.43
4337 4806 8.311109 ACCCAGCAATCTATTTTATTTTCGTTT 58.689 29.630 0.00 0.00 0.00 3.60
4339 4808 7.257722 CACCCAGCAATCTATTTTATTTTCGT 58.742 34.615 0.00 0.00 0.00 3.85
4341 4810 7.468922 GCACCCAGCAATCTATTTTATTTTC 57.531 36.000 0.00 0.00 44.79 2.29
4347 4816 6.040166 CAATAGAGCACCCAGCAATCTATTTT 59.960 38.462 8.15 0.00 43.01 1.82
4348 4817 5.533903 CAATAGAGCACCCAGCAATCTATTT 59.466 40.000 8.15 0.00 43.01 1.40
4349 4818 5.068636 CAATAGAGCACCCAGCAATCTATT 58.931 41.667 0.00 0.00 44.79 1.73
4372 7173 2.228480 TCCAGCCCACTACCAACCC 61.228 63.158 0.00 0.00 0.00 4.11
4375 7176 1.488705 CCTGTCCAGCCCACTACCAA 61.489 60.000 0.00 0.00 0.00 3.67
4381 7182 1.610673 TCTCTCCTGTCCAGCCCAC 60.611 63.158 0.00 0.00 0.00 4.61
4385 7186 2.899505 GCCTCTCTCCTGTCCAGC 59.100 66.667 0.00 0.00 0.00 4.85
4392 7193 0.467290 GAGATGGACGCCTCTCTCCT 60.467 60.000 13.09 0.00 35.95 3.69
4402 7203 1.000163 CCTTATGGGACGAGATGGACG 60.000 57.143 0.00 0.00 37.23 4.79
4455 7256 9.092876 TCGACTTTCAAAAATAAAGTTGCAAAT 57.907 25.926 0.00 0.00 44.94 2.32
4456 7257 8.467402 TCGACTTTCAAAAATAAAGTTGCAAA 57.533 26.923 0.00 0.00 44.94 3.68
4457 7258 8.641499 ATCGACTTTCAAAAATAAAGTTGCAA 57.359 26.923 0.00 0.00 44.94 4.08
4458 7259 7.918033 TGATCGACTTTCAAAAATAAAGTTGCA 59.082 29.630 9.95 0.00 44.94 4.08
4459 7260 8.280909 TGATCGACTTTCAAAAATAAAGTTGC 57.719 30.769 9.95 0.99 44.94 4.17
4469 7270 9.483916 TCTACATTAACTGATCGACTTTCAAAA 57.516 29.630 0.00 0.00 0.00 2.44
4470 7271 9.483916 TTCTACATTAACTGATCGACTTTCAAA 57.516 29.630 0.00 0.00 0.00 2.69
4471 7272 9.140286 CTTCTACATTAACTGATCGACTTTCAA 57.860 33.333 0.00 0.00 0.00 2.69
4472 7273 7.275779 GCTTCTACATTAACTGATCGACTTTCA 59.724 37.037 0.00 0.00 0.00 2.69
4473 7274 7.489757 AGCTTCTACATTAACTGATCGACTTTC 59.510 37.037 0.00 0.00 0.00 2.62
4474 7275 7.324178 AGCTTCTACATTAACTGATCGACTTT 58.676 34.615 0.00 0.00 0.00 2.66
4475 7276 6.868622 AGCTTCTACATTAACTGATCGACTT 58.131 36.000 0.00 0.00 0.00 3.01
4477 7278 6.266323 TGAGCTTCTACATTAACTGATCGAC 58.734 40.000 0.00 0.00 0.00 4.20
4478 7279 6.451064 TGAGCTTCTACATTAACTGATCGA 57.549 37.500 0.00 0.00 0.00 3.59
4479 7280 8.803201 TTATGAGCTTCTACATTAACTGATCG 57.197 34.615 0.00 0.00 0.00 3.69
4482 7283 9.944376 AAGTTTATGAGCTTCTACATTAACTGA 57.056 29.630 14.54 0.00 41.86 3.41
4483 7284 9.979270 CAAGTTTATGAGCTTCTACATTAACTG 57.021 33.333 14.54 8.18 41.86 3.16
4485 7286 8.669243 AGCAAGTTTATGAGCTTCTACATTAAC 58.331 33.333 6.82 6.82 36.75 2.01
4486 7287 8.792830 AGCAAGTTTATGAGCTTCTACATTAA 57.207 30.769 0.00 0.00 32.52 1.40
4487 7288 9.534565 CTAGCAAGTTTATGAGCTTCTACATTA 57.465 33.333 0.00 0.00 38.47 1.90
4490 7291 7.170393 TCTAGCAAGTTTATGAGCTTCTACA 57.830 36.000 0.00 0.00 38.47 2.74
4491 7292 8.655651 AATCTAGCAAGTTTATGAGCTTCTAC 57.344 34.615 0.00 0.00 38.47 2.59
4492 7293 9.672673 AAAATCTAGCAAGTTTATGAGCTTCTA 57.327 29.630 0.00 0.00 38.47 2.10
4493 7294 8.572855 AAAATCTAGCAAGTTTATGAGCTTCT 57.427 30.769 0.00 0.00 38.47 2.85
4494 7295 9.283420 GAAAAATCTAGCAAGTTTATGAGCTTC 57.717 33.333 0.00 0.00 38.47 3.86
4497 7298 7.766283 AGGAAAAATCTAGCAAGTTTATGAGC 58.234 34.615 0.00 0.00 0.00 4.26
4500 7301 9.358872 GGAAAGGAAAAATCTAGCAAGTTTATG 57.641 33.333 0.00 0.00 0.00 1.90
4501 7302 9.314133 AGGAAAGGAAAAATCTAGCAAGTTTAT 57.686 29.630 0.00 0.00 0.00 1.40
4502 7303 8.706322 AGGAAAGGAAAAATCTAGCAAGTTTA 57.294 30.769 0.00 0.00 0.00 2.01
4503 7304 7.603180 AGGAAAGGAAAAATCTAGCAAGTTT 57.397 32.000 0.00 0.00 0.00 2.66
4504 7305 7.603180 AAGGAAAGGAAAAATCTAGCAAGTT 57.397 32.000 0.00 0.00 0.00 2.66
4505 7306 8.164070 TCTAAGGAAAGGAAAAATCTAGCAAGT 58.836 33.333 0.00 0.00 0.00 3.16
4506 7307 8.567285 TCTAAGGAAAGGAAAAATCTAGCAAG 57.433 34.615 0.00 0.00 0.00 4.01
4508 7309 9.838339 CTATCTAAGGAAAGGAAAAATCTAGCA 57.162 33.333 0.00 0.00 0.00 3.49
4525 7326 0.687354 ACATGGCGCCCTATCTAAGG 59.313 55.000 26.77 7.48 46.09 2.69
4526 7327 1.070758 ACACATGGCGCCCTATCTAAG 59.929 52.381 26.77 2.99 0.00 2.18
4527 7328 1.128200 ACACATGGCGCCCTATCTAA 58.872 50.000 26.77 2.60 0.00 2.10
4528 7329 0.392706 CACACATGGCGCCCTATCTA 59.607 55.000 26.77 3.54 0.00 1.98
4529 7330 1.146930 CACACATGGCGCCCTATCT 59.853 57.895 26.77 0.00 0.00 1.98
4530 7331 1.893808 CCACACATGGCGCCCTATC 60.894 63.158 26.77 0.00 39.82 2.08
4531 7332 2.192979 CCACACATGGCGCCCTAT 59.807 61.111 26.77 9.10 39.82 2.57
4548 7349 3.891049 AGAATCATGGGGTTGAGTAAGC 58.109 45.455 0.00 0.00 0.00 3.09
4549 7350 5.749462 AGAAGAATCATGGGGTTGAGTAAG 58.251 41.667 0.00 0.00 0.00 2.34
4550 7351 5.779241 AGAAGAATCATGGGGTTGAGTAA 57.221 39.130 0.00 0.00 0.00 2.24
4551 7352 5.014123 ACAAGAAGAATCATGGGGTTGAGTA 59.986 40.000 0.00 0.00 0.00 2.59
4552 7353 4.202609 ACAAGAAGAATCATGGGGTTGAGT 60.203 41.667 0.00 0.00 0.00 3.41
4553 7354 4.338879 ACAAGAAGAATCATGGGGTTGAG 58.661 43.478 0.00 0.00 0.00 3.02
4554 7355 4.387026 ACAAGAAGAATCATGGGGTTGA 57.613 40.909 0.00 0.00 0.00 3.18
4555 7356 5.300286 GGATACAAGAAGAATCATGGGGTTG 59.700 44.000 0.00 0.00 0.00 3.77
4556 7357 5.449553 GGATACAAGAAGAATCATGGGGTT 58.550 41.667 0.00 0.00 0.00 4.11
4557 7358 4.141158 GGGATACAAGAAGAATCATGGGGT 60.141 45.833 0.00 0.00 39.74 4.95
4558 7359 4.141181 TGGGATACAAGAAGAATCATGGGG 60.141 45.833 0.00 0.00 39.74 4.96
4559 7360 4.823989 GTGGGATACAAGAAGAATCATGGG 59.176 45.833 0.00 0.00 39.74 4.00
4560 7361 5.439721 TGTGGGATACAAGAAGAATCATGG 58.560 41.667 0.00 0.00 36.06 3.66
4580 7381 6.907206 ATTGATTGAAAACCACAGTTTGTG 57.093 33.333 2.28 2.28 45.54 3.33
4581 7382 9.097257 CTTTATTGATTGAAAACCACAGTTTGT 57.903 29.630 0.00 0.00 45.54 2.83
4582 7383 8.063630 GCTTTATTGATTGAAAACCACAGTTTG 58.936 33.333 0.00 0.00 45.54 2.93
4584 7385 7.500141 AGCTTTATTGATTGAAAACCACAGTT 58.500 30.769 0.00 0.00 38.03 3.16
4585 7386 7.054491 AGCTTTATTGATTGAAAACCACAGT 57.946 32.000 0.00 0.00 0.00 3.55
4586 7387 7.951530 AAGCTTTATTGATTGAAAACCACAG 57.048 32.000 0.00 0.00 0.00 3.66
4587 7388 8.610896 CAAAAGCTTTATTGATTGAAAACCACA 58.389 29.630 13.10 0.00 0.00 4.17
4588 7389 7.587392 GCAAAAGCTTTATTGATTGAAAACCAC 59.413 33.333 13.10 0.00 0.00 4.16
4589 7390 7.498570 AGCAAAAGCTTTATTGATTGAAAACCA 59.501 29.630 13.10 0.00 0.00 3.67
4590 7391 7.864686 AGCAAAAGCTTTATTGATTGAAAACC 58.135 30.769 13.10 0.00 0.00 3.27
4591 7392 9.720667 AAAGCAAAAGCTTTATTGATTGAAAAC 57.279 25.926 13.10 0.00 38.12 2.43
4594 7395 8.987890 GGTAAAGCAAAAGCTTTATTGATTGAA 58.012 29.630 21.18 3.04 42.04 2.69
4595 7396 7.602265 GGGTAAAGCAAAAGCTTTATTGATTGA 59.398 33.333 21.18 3.44 42.04 2.57
4596 7397 7.148423 GGGGTAAAGCAAAAGCTTTATTGATTG 60.148 37.037 21.18 7.03 42.04 2.67
4597 7398 6.878923 GGGGTAAAGCAAAAGCTTTATTGATT 59.121 34.615 21.18 10.27 42.04 2.57
4598 7399 6.213397 AGGGGTAAAGCAAAAGCTTTATTGAT 59.787 34.615 21.18 3.75 42.04 2.57
4599 7400 5.542251 AGGGGTAAAGCAAAAGCTTTATTGA 59.458 36.000 21.18 0.00 42.04 2.57
4600 7401 5.793817 AGGGGTAAAGCAAAAGCTTTATTG 58.206 37.500 21.18 9.33 42.04 1.90
4601 7402 5.542251 TGAGGGGTAAAGCAAAAGCTTTATT 59.458 36.000 21.18 8.19 42.04 1.40
4602 7403 5.083821 TGAGGGGTAAAGCAAAAGCTTTAT 58.916 37.500 21.18 9.04 42.04 1.40
4603 7404 4.475345 TGAGGGGTAAAGCAAAAGCTTTA 58.525 39.130 13.10 16.20 40.11 1.85
4604 7405 3.304829 TGAGGGGTAAAGCAAAAGCTTT 58.695 40.909 18.05 18.05 41.97 3.51
4605 7406 2.957474 TGAGGGGTAAAGCAAAAGCTT 58.043 42.857 0.00 0.00 0.00 3.74
4606 7407 2.675658 TGAGGGGTAAAGCAAAAGCT 57.324 45.000 0.00 0.00 0.00 3.74
4607 7408 3.744238 TTTGAGGGGTAAAGCAAAAGC 57.256 42.857 0.00 0.00 0.00 3.51
4631 7432 0.038983 GCGTTGTATGCGGGGTTTTT 60.039 50.000 0.00 0.00 0.00 1.94
4634 7435 0.461339 CTAGCGTTGTATGCGGGGTT 60.461 55.000 0.00 0.00 34.72 4.11
4635 7436 1.143183 CTAGCGTTGTATGCGGGGT 59.857 57.895 0.00 0.00 34.72 4.95
4636 7437 1.594293 CCTAGCGTTGTATGCGGGG 60.594 63.158 0.00 0.00 34.72 5.73
4638 7439 1.087202 TTGCCTAGCGTTGTATGCGG 61.087 55.000 0.00 0.00 34.72 5.69
4648 7449 1.031571 TGGGATTGCTTTGCCTAGCG 61.032 55.000 3.13 0.00 44.18 4.26
4661 7462 1.070601 GCTTGTTGCCTTGTTGGGATT 59.929 47.619 0.00 0.00 35.58 3.01
4681 8107 1.024579 CCCCTTCGATCGGTTGTTGG 61.025 60.000 16.41 7.55 0.00 3.77
4714 8140 1.482621 CGCCATTGTCCTCGTCGATG 61.483 60.000 0.00 0.00 0.00 3.84
4715 8141 1.226974 CGCCATTGTCCTCGTCGAT 60.227 57.895 0.00 0.00 0.00 3.59
4717 8143 2.885644 CCGCCATTGTCCTCGTCG 60.886 66.667 0.00 0.00 0.00 5.12
4719 8145 2.047274 CACCGCCATTGTCCTCGT 60.047 61.111 0.00 0.00 0.00 4.18
4720 8146 3.499737 GCACCGCCATTGTCCTCG 61.500 66.667 0.00 0.00 0.00 4.63
4723 8149 3.443045 CCTGCACCGCCATTGTCC 61.443 66.667 0.00 0.00 0.00 4.02
4740 8166 2.281761 CCTCACCACCTGCACCAC 60.282 66.667 0.00 0.00 0.00 4.16
4774 8200 1.338769 GCAGTACCGTTGATGTCCCTT 60.339 52.381 0.00 0.00 0.00 3.95
4777 8206 2.000447 GAAGCAGTACCGTTGATGTCC 59.000 52.381 0.00 0.00 0.00 4.02
4793 8222 0.751643 AGGAGCGAGAGAGAGGAAGC 60.752 60.000 0.00 0.00 0.00 3.86
4797 8226 0.472471 AGGTAGGAGCGAGAGAGAGG 59.528 60.000 0.00 0.00 0.00 3.69
4807 8236 3.561725 CGATTTGATCCAAAGGTAGGAGC 59.438 47.826 0.00 0.00 41.82 4.70
4815 8246 9.787532 AAATACATACAACGATTTGATCCAAAG 57.212 29.630 0.00 0.00 36.76 2.77
4831 8262 7.931578 ATTTGAAACGGAGGAAATACATACA 57.068 32.000 0.00 0.00 0.00 2.29
4840 8271 4.634199 ACGAGTAATTTGAAACGGAGGAA 58.366 39.130 0.00 0.00 0.00 3.36
4841 8272 4.240096 GACGAGTAATTTGAAACGGAGGA 58.760 43.478 0.00 0.00 0.00 3.71
4842 8273 3.370061 GGACGAGTAATTTGAAACGGAGG 59.630 47.826 0.00 0.00 0.00 4.30
4843 8274 3.370061 GGGACGAGTAATTTGAAACGGAG 59.630 47.826 0.00 0.00 0.00 4.63
4844 8275 3.007182 AGGGACGAGTAATTTGAAACGGA 59.993 43.478 0.00 0.00 0.00 4.69
4845 8276 3.124636 CAGGGACGAGTAATTTGAAACGG 59.875 47.826 0.00 0.00 0.00 4.44
4846 8277 3.991773 TCAGGGACGAGTAATTTGAAACG 59.008 43.478 0.00 0.00 0.00 3.60
4847 8278 5.934935 TTCAGGGACGAGTAATTTGAAAC 57.065 39.130 0.00 0.00 0.00 2.78
4848 8279 6.072175 CCATTTCAGGGACGAGTAATTTGAAA 60.072 38.462 0.00 0.00 37.44 2.69
4849 8280 5.414454 CCATTTCAGGGACGAGTAATTTGAA 59.586 40.000 0.00 0.00 0.00 2.69
4850 8281 4.941263 CCATTTCAGGGACGAGTAATTTGA 59.059 41.667 0.00 0.00 0.00 2.69
4851 8282 4.941263 TCCATTTCAGGGACGAGTAATTTG 59.059 41.667 0.00 0.00 0.00 2.32
4852 8283 5.174037 TCCATTTCAGGGACGAGTAATTT 57.826 39.130 0.00 0.00 0.00 1.82
4853 8284 4.837093 TCCATTTCAGGGACGAGTAATT 57.163 40.909 0.00 0.00 0.00 1.40
4854 8285 4.164221 ACATCCATTTCAGGGACGAGTAAT 59.836 41.667 0.00 0.00 37.23 1.89
4855 8286 3.517901 ACATCCATTTCAGGGACGAGTAA 59.482 43.478 0.00 0.00 37.23 2.24
4856 8287 3.104512 ACATCCATTTCAGGGACGAGTA 58.895 45.455 0.00 0.00 37.23 2.59
4857 8288 1.909302 ACATCCATTTCAGGGACGAGT 59.091 47.619 0.00 0.00 37.23 4.18
4858 8289 2.698855 ACATCCATTTCAGGGACGAG 57.301 50.000 0.00 0.00 37.23 4.18
4859 8290 3.967326 AGATACATCCATTTCAGGGACGA 59.033 43.478 0.00 0.00 37.23 4.20
4860 8291 4.342862 AGATACATCCATTTCAGGGACG 57.657 45.455 0.00 0.00 37.23 4.79
4861 8292 6.672266 TCTAGATACATCCATTTCAGGGAC 57.328 41.667 0.00 0.00 37.23 4.46
4862 8293 7.067496 GTTCTAGATACATCCATTTCAGGGA 57.933 40.000 0.00 0.00 39.14 4.20


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.