Multiple sequence alignment - TraesCS4A01G483400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G483400 chr4A 100.000 2999 0 0 1 2999 738391784 738388786 0.000000e+00 5539.0
1 TraesCS4A01G483400 chr4A 85.782 1899 246 16 255 2130 737854247 737852350 0.000000e+00 1989.0
2 TraesCS4A01G483400 chr4A 86.203 1841 236 11 306 2130 738351892 738353730 0.000000e+00 1977.0
3 TraesCS4A01G483400 chr4A 85.429 1853 238 23 305 2131 738523596 738521750 0.000000e+00 1897.0
4 TraesCS4A01G483400 chr4A 88.052 929 109 2 305 1232 737845688 737844761 0.000000e+00 1099.0
5 TraesCS4A01G483400 chr7A 86.872 1851 214 21 305 2131 5352996 5351151 0.000000e+00 2045.0
6 TraesCS4A01G483400 chr7A 86.263 1849 223 21 305 2131 5000712 5002551 0.000000e+00 1978.0
7 TraesCS4A01G483400 chr7A 85.815 1840 234 20 305 2123 5611157 5612990 0.000000e+00 1927.0
8 TraesCS4A01G483400 chr7A 84.903 1848 232 24 305 2131 5747710 5745889 0.000000e+00 1823.0
9 TraesCS4A01G483400 chr7A 87.168 1621 179 23 535 2131 5023345 5024960 0.000000e+00 1814.0
10 TraesCS4A01G483400 chr7A 88.006 1309 130 17 1016 2304 5772858 5771557 0.000000e+00 1522.0
11 TraesCS4A01G483400 chr7A 86.981 722 87 6 305 1022 5776791 5776073 0.000000e+00 806.0
12 TraesCS4A01G483400 chr7A 87.008 508 65 1 68 574 6103365 6103872 3.350000e-159 571.0
13 TraesCS4A01G483400 chr7A 90.000 280 28 0 8 287 5000487 5000766 2.200000e-96 363.0
14 TraesCS4A01G483400 chr7A 84.740 308 47 0 3 310 5777021 5776714 2.900000e-80 309.0
15 TraesCS4A01G483400 chr7A 85.614 285 41 0 3 287 5353226 5352942 1.750000e-77 300.0
16 TraesCS4A01G483400 chr7A 92.727 55 3 1 2328 2381 561785107 561785053 8.910000e-11 78.7
17 TraesCS4A01G483400 chrUn 87.853 1309 132 17 1016 2304 228698046 228696745 0.000000e+00 1511.0
18 TraesCS4A01G483400 chrUn 93.886 229 13 1 2076 2304 435278336 435278109 7.960000e-91 344.0
19 TraesCS4A01G483400 chrUn 100.000 33 0 0 2297 2329 80093685 80093653 8.980000e-06 62.1
20 TraesCS4A01G483400 chr7D 84.447 958 121 17 525 1460 5031635 5032586 0.000000e+00 918.0
21 TraesCS4A01G483400 chr7D 91.667 612 49 2 1520 2131 5032587 5033196 0.000000e+00 846.0
22 TraesCS4A01G483400 chr7D 79.147 211 34 10 2586 2790 498283788 498283582 1.450000e-28 137.0
23 TraesCS4A01G483400 chr7D 83.478 115 14 4 2428 2541 65898168 65898278 5.290000e-18 102.0
24 TraesCS4A01G483400 chr7D 95.918 49 2 0 2328 2376 483286656 483286704 2.480000e-11 80.5
25 TraesCS4A01G483400 chr6D 81.277 235 28 14 2544 2773 119943632 119943855 3.070000e-40 176.0
26 TraesCS4A01G483400 chr6D 77.344 256 35 18 2544 2791 144472207 144472447 2.430000e-26 130.0
27 TraesCS4A01G483400 chr7B 85.470 117 11 5 2428 2541 679885890 679886003 1.890000e-22 117.0
28 TraesCS4A01G483400 chr7B 89.062 64 3 4 2328 2387 733467178 733467115 3.210000e-10 76.8
29 TraesCS4A01G483400 chr7B 94.737 38 2 0 2292 2329 526680798 526680835 3.230000e-05 60.2
30 TraesCS4A01G483400 chr7B 97.143 35 1 0 2295 2329 615713183 615713217 3.230000e-05 60.2
31 TraesCS4A01G483400 chr3D 82.946 129 16 5 2416 2541 62341725 62341850 8.790000e-21 111.0
32 TraesCS4A01G483400 chr3D 91.111 45 2 2 2486 2530 62344593 62344551 3.230000e-05 60.2
33 TraesCS4A01G483400 chr3A 82.677 127 20 2 2416 2541 71232061 71232186 8.790000e-21 111.0
34 TraesCS4A01G483400 chr2D 81.148 122 21 2 2421 2541 313617991 313617871 2.460000e-16 97.1
35 TraesCS4A01G483400 chr2D 87.059 85 9 2 2428 2511 522138448 522138531 8.850000e-16 95.3
36 TraesCS4A01G483400 chr2D 77.215 158 26 7 2596 2748 313612923 313613075 1.920000e-12 84.2
37 TraesCS4A01G483400 chr1B 94.737 57 3 0 2328 2384 667808169 667808225 4.120000e-14 89.8
38 TraesCS4A01G483400 chr1B 96.000 50 2 0 2328 2377 390401302 390401351 6.890000e-12 82.4
39 TraesCS4A01G483400 chr3B 94.737 57 1 1 2328 2382 807438924 807438868 1.480000e-13 87.9
40 TraesCS4A01G483400 chr3B 97.297 37 1 0 2293 2329 261791686 261791650 2.500000e-06 63.9
41 TraesCS4A01G483400 chr6B 96.078 51 1 1 2328 2378 215651383 215651432 6.890000e-12 82.4
42 TraesCS4A01G483400 chr6B 81.609 87 14 2 2462 2547 213013670 213013585 1.490000e-08 71.3
43 TraesCS4A01G483400 chr6B 92.308 39 3 0 2291 2329 702817567 702817605 4.180000e-04 56.5
44 TraesCS4A01G483400 chr6B 92.105 38 3 0 2428 2465 25999939 25999902 2.000000e-03 54.7
45 TraesCS4A01G483400 chr2A 96.000 50 2 0 2328 2377 766707123 766707172 6.890000e-12 82.4
46 TraesCS4A01G483400 chr5A 96.000 50 1 1 2328 2376 680847243 680847292 2.480000e-11 80.5
47 TraesCS4A01G483400 chr2B 81.250 96 16 2 2444 2538 757396661 757396755 3.210000e-10 76.8
48 TraesCS4A01G483400 chr2B 95.000 40 1 1 2291 2329 587727573 587727534 8.980000e-06 62.1
49 TraesCS4A01G483400 chr5B 97.222 36 1 0 2294 2329 401657470 401657435 8.980000e-06 62.1
50 TraesCS4A01G483400 chr5B 92.857 42 1 2 2289 2329 622039380 622039340 3.230000e-05 60.2
51 TraesCS4A01G483400 chr1A 100.000 32 0 0 2298 2329 392054525 392054494 3.230000e-05 60.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G483400 chr4A 738388786 738391784 2998 True 5539.0 5539 100.000000 1 2999 1 chr4A.!!$R3 2998
1 TraesCS4A01G483400 chr4A 737852350 737854247 1897 True 1989.0 1989 85.782000 255 2130 1 chr4A.!!$R2 1875
2 TraesCS4A01G483400 chr4A 738351892 738353730 1838 False 1977.0 1977 86.203000 306 2130 1 chr4A.!!$F1 1824
3 TraesCS4A01G483400 chr4A 738521750 738523596 1846 True 1897.0 1897 85.429000 305 2131 1 chr4A.!!$R4 1826
4 TraesCS4A01G483400 chr4A 737844761 737845688 927 True 1099.0 1099 88.052000 305 1232 1 chr4A.!!$R1 927
5 TraesCS4A01G483400 chr7A 5611157 5612990 1833 False 1927.0 1927 85.815000 305 2123 1 chr7A.!!$F2 1818
6 TraesCS4A01G483400 chr7A 5745889 5747710 1821 True 1823.0 1823 84.903000 305 2131 1 chr7A.!!$R1 1826
7 TraesCS4A01G483400 chr7A 5023345 5024960 1615 False 1814.0 1814 87.168000 535 2131 1 chr7A.!!$F1 1596
8 TraesCS4A01G483400 chr7A 5351151 5353226 2075 True 1172.5 2045 86.243000 3 2131 2 chr7A.!!$R3 2128
9 TraesCS4A01G483400 chr7A 5000487 5002551 2064 False 1170.5 1978 88.131500 8 2131 2 chr7A.!!$F4 2123
10 TraesCS4A01G483400 chr7A 5771557 5777021 5464 True 879.0 1522 86.575667 3 2304 3 chr7A.!!$R4 2301
11 TraesCS4A01G483400 chr7A 6103365 6103872 507 False 571.0 571 87.008000 68 574 1 chr7A.!!$F3 506
12 TraesCS4A01G483400 chrUn 228696745 228698046 1301 True 1511.0 1511 87.853000 1016 2304 1 chrUn.!!$R2 1288
13 TraesCS4A01G483400 chr7D 5031635 5033196 1561 False 882.0 918 88.057000 525 2131 2 chr7D.!!$F3 1606

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
570 644 0.178992 TGGCTTCAGTTCCAAGTGGG 60.179 55.0 0.0 0.0 35.41 4.61 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2496 5826 0.179001 GCCTGGTTGGTTAGTGTGGT 60.179 55.0 0.0 0.0 38.35 4.16 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
64 65 1.949525 CCACAGTGTCCCTTGAACAAG 59.050 52.381 7.49 7.49 38.14 3.16
86 87 1.202989 TGCAGGAGTTACATTTGGGCA 60.203 47.619 0.00 0.00 0.00 5.36
90 91 3.057315 CAGGAGTTACATTTGGGCAACAG 60.057 47.826 0.00 0.00 39.74 3.16
92 93 1.269448 AGTTACATTTGGGCAACAGCG 59.731 47.619 0.00 0.00 39.74 5.18
117 118 3.554232 CGGAATCATGCCGGATCG 58.446 61.111 5.05 0.00 44.87 3.69
140 141 2.638480 AGCACACTTGACCAGCTTAA 57.362 45.000 0.00 0.00 29.98 1.85
157 158 3.371285 GCTTAACCGTTCTTGACATCTCC 59.629 47.826 0.00 0.00 0.00 3.71
171 172 5.741011 TGACATCTCCCATAACAACCTAAC 58.259 41.667 0.00 0.00 0.00 2.34
231 232 8.083828 AGTTTAAGCATCCTTGATCTCTCTAA 57.916 34.615 0.00 0.00 32.47 2.10
232 233 7.984617 AGTTTAAGCATCCTTGATCTCTCTAAC 59.015 37.037 0.00 0.00 32.47 2.34
233 234 5.946942 AAGCATCCTTGATCTCTCTAACA 57.053 39.130 0.00 0.00 0.00 2.41
234 235 5.946942 AGCATCCTTGATCTCTCTAACAA 57.053 39.130 0.00 0.00 0.00 2.83
235 236 5.669477 AGCATCCTTGATCTCTCTAACAAC 58.331 41.667 0.00 0.00 0.00 3.32
236 237 5.188555 AGCATCCTTGATCTCTCTAACAACA 59.811 40.000 0.00 0.00 0.00 3.33
237 238 5.877012 GCATCCTTGATCTCTCTAACAACAA 59.123 40.000 0.00 0.00 0.00 2.83
238 239 6.541641 GCATCCTTGATCTCTCTAACAACAAT 59.458 38.462 0.00 0.00 0.00 2.71
239 240 7.254727 GCATCCTTGATCTCTCTAACAACAATC 60.255 40.741 0.00 0.00 0.00 2.67
240 241 7.487822 TCCTTGATCTCTCTAACAACAATCT 57.512 36.000 0.00 0.00 0.00 2.40
241 242 7.551585 TCCTTGATCTCTCTAACAACAATCTC 58.448 38.462 0.00 0.00 0.00 2.75
242 243 7.179160 TCCTTGATCTCTCTAACAACAATCTCA 59.821 37.037 0.00 0.00 0.00 3.27
243 244 7.821359 CCTTGATCTCTCTAACAACAATCTCAA 59.179 37.037 0.00 0.00 0.00 3.02
244 245 9.381033 CTTGATCTCTCTAACAACAATCTCAAT 57.619 33.333 0.00 0.00 0.00 2.57
245 246 8.713737 TGATCTCTCTAACAACAATCTCAATG 57.286 34.615 0.00 0.00 0.00 2.82
246 247 7.767659 TGATCTCTCTAACAACAATCTCAATGG 59.232 37.037 0.00 0.00 0.00 3.16
247 248 7.244886 TCTCTCTAACAACAATCTCAATGGA 57.755 36.000 0.00 0.00 0.00 3.41
248 249 7.099764 TCTCTCTAACAACAATCTCAATGGAC 58.900 38.462 0.00 0.00 0.00 4.02
249 250 6.173339 TCTCTAACAACAATCTCAATGGACC 58.827 40.000 0.00 0.00 0.00 4.46
250 251 6.013379 TCTCTAACAACAATCTCAATGGACCT 60.013 38.462 0.00 0.00 0.00 3.85
251 252 5.939883 TCTAACAACAATCTCAATGGACCTG 59.060 40.000 0.00 0.00 0.00 4.00
252 253 4.104383 ACAACAATCTCAATGGACCTGT 57.896 40.909 0.00 0.00 0.00 4.00
253 254 5.241403 ACAACAATCTCAATGGACCTGTA 57.759 39.130 0.00 0.00 0.00 2.74
265 266 3.724478 TGGACCTGTACCATCTGAGATT 58.276 45.455 0.00 0.00 32.03 2.40
274 275 2.307768 CCATCTGAGATTGGCATGCTT 58.692 47.619 18.92 2.57 0.00 3.91
287 288 2.529151 GCATGCTTGGTAATTTGACCG 58.471 47.619 11.37 0.00 42.99 4.79
294 295 4.396790 GCTTGGTAATTTGACCGTATTGGA 59.603 41.667 0.00 0.00 42.99 3.53
295 296 5.106078 GCTTGGTAATTTGACCGTATTGGAA 60.106 40.000 0.00 0.00 42.99 3.53
299 300 6.072397 TGGTAATTTGACCGTATTGGAACTTG 60.072 38.462 0.00 0.00 42.99 3.16
303 304 2.027561 TGACCGTATTGGAACTTGGAGG 60.028 50.000 0.00 0.00 42.00 4.30
316 317 1.471684 CTTGGAGGCAACAATCTCAGC 59.528 52.381 0.00 0.00 41.41 4.26
319 320 1.372087 GAGGCAACAATCTCAGCGGG 61.372 60.000 0.00 0.00 41.41 6.13
349 422 1.138859 TCTGACATCGGTATGCTTGGG 59.861 52.381 0.00 0.00 36.50 4.12
419 493 6.238648 CCTCACCGAAGAACATTTTACAAGTT 60.239 38.462 0.00 0.00 0.00 2.66
431 505 9.940166 AACATTTTACAAGTTTAACGAGGTTAG 57.060 29.630 0.00 0.00 29.41 2.34
520 594 7.509546 TCAGTTTAGAAGAAACAGATCTTGGT 58.490 34.615 0.00 0.00 39.70 3.67
570 644 0.178992 TGGCTTCAGTTCCAAGTGGG 60.179 55.000 0.00 0.00 35.41 4.61
585 661 0.533755 GTGGGCATTCTCTCGATGGG 60.534 60.000 0.00 0.00 0.00 4.00
607 683 6.014584 TGGGTATATCAAGCACAGGTATAGTG 60.015 42.308 0.00 0.00 39.92 2.74
652 728 3.324556 ACACTACATTTGCAAAGGCCATT 59.675 39.130 22.79 6.82 40.13 3.16
654 730 4.389687 CACTACATTTGCAAAGGCCATTTC 59.610 41.667 22.79 0.00 40.13 2.17
667 743 2.092753 GGCCATTTCTCTGGACATCTCA 60.093 50.000 0.00 0.00 44.44 3.27
681 757 7.231115 TCTGGACATCTCAAACAATGAAATCAA 59.769 33.333 0.00 0.00 37.67 2.57
728 804 7.093858 TGGAATTCATGTCACTGCAATATTTCA 60.094 33.333 7.93 0.00 0.00 2.69
765 841 5.784578 AAACTAACTGGTGAAATCCCAAC 57.215 39.130 0.00 0.00 0.00 3.77
786 862 8.276477 CCCAACCTTACCAAGAAATATTACCTA 58.724 37.037 0.00 0.00 0.00 3.08
788 864 8.823818 CAACCTTACCAAGAAATATTACCTACG 58.176 37.037 0.00 0.00 0.00 3.51
800 876 4.650754 ATTACCTACGTGGACATGTCTC 57.349 45.455 24.50 15.19 39.71 3.36
808 884 2.480419 CGTGGACATGTCTCAAAACTCC 59.520 50.000 24.50 6.64 0.00 3.85
835 911 5.481105 TCTGGAAATTTGCCATCAAACATC 58.519 37.500 7.27 0.00 44.11 3.06
883 959 4.458989 GTGCTGGTCTCCAATCAAATAACA 59.541 41.667 0.00 0.00 30.80 2.41
931 1008 1.615392 GTGAAGCCTTGAATGCCTTGT 59.385 47.619 0.00 0.00 0.00 3.16
975 1052 1.871676 GGACAACTTCCTCGGTGTTTC 59.128 52.381 0.00 0.00 41.95 2.78
977 1054 1.137479 ACAACTTCCTCGGTGTTTCGA 59.863 47.619 0.00 0.00 37.60 3.71
985 1062 0.599204 TCGGTGTTTCGAGGTGAAGC 60.599 55.000 0.00 0.00 37.99 3.86
1075 4376 5.189180 GTGGACAATTGAAGGCTCTAGATT 58.811 41.667 13.59 0.00 0.00 2.40
1077 4378 5.649395 TGGACAATTGAAGGCTCTAGATTTG 59.351 40.000 13.59 0.00 0.00 2.32
1100 4401 7.789273 TGTCACGTAATAGTTTTTCTGGAAA 57.211 32.000 0.00 0.00 0.00 3.13
1160 4461 5.455056 TTTTTGCGGCTAAACCAGAATAA 57.545 34.783 9.05 0.00 39.03 1.40
1199 4500 4.272489 CCAGCCACCATCTCAAATCTTAA 58.728 43.478 0.00 0.00 0.00 1.85
1227 4529 1.833630 CACCATCTGAACCTAGCAGGA 59.166 52.381 8.91 0.00 37.67 3.86
1232 4534 4.384537 CCATCTGAACCTAGCAGGAAATGA 60.385 45.833 8.91 3.39 37.67 2.57
1239 4541 6.156949 TGAACCTAGCAGGAAATGACTTATCT 59.843 38.462 8.91 0.00 37.67 1.98
1242 4544 3.549794 AGCAGGAAATGACTTATCTGGC 58.450 45.455 0.00 0.00 0.00 4.85
1244 4546 2.874701 CAGGAAATGACTTATCTGGCGG 59.125 50.000 0.00 0.00 0.00 6.13
1261 4563 1.963338 GGCATACCGAGGCATCTGC 60.963 63.158 2.05 2.05 41.14 4.26
1315 4638 4.460948 TCAGAACCTATTGACGGTTACC 57.539 45.455 0.00 0.00 44.41 2.85
1320 4643 3.175594 ACCTATTGACGGTTACCCAGAA 58.824 45.455 0.00 0.00 0.00 3.02
1323 4646 5.426185 ACCTATTGACGGTTACCCAGAAATA 59.574 40.000 0.00 0.00 0.00 1.40
1428 4751 6.583806 GCATTGACTTATCTTTCAACCAACTG 59.416 38.462 0.00 0.00 34.61 3.16
1429 4752 7.651808 CATTGACTTATCTTTCAACCAACTGT 58.348 34.615 0.00 0.00 34.61 3.55
1442 4765 3.521727 ACCAACTGTCTGGGAGAATACT 58.478 45.455 11.77 0.00 41.16 2.12
1450 4773 7.129425 ACTGTCTGGGAGAATACTAGAAGAAT 58.871 38.462 0.00 0.00 0.00 2.40
1491 4814 7.466455 GCGTTGATGAACTTGAATCTATCATGT 60.466 37.037 0.00 0.00 45.48 3.21
1497 4820 8.492673 TGAACTTGAATCTATCATGTAACCAC 57.507 34.615 0.00 0.00 43.48 4.16
1660 4983 5.990668 ACAATCTAACAGGGAGAATACCAC 58.009 41.667 0.00 0.00 0.00 4.16
1876 5199 2.064434 TTGGGTTGTGTTCTGCATCA 57.936 45.000 0.00 0.00 0.00 3.07
1882 5205 2.710220 TGTGTTCTGCATCATGTTGC 57.290 45.000 19.71 19.71 43.07 4.17
1947 5270 8.655935 ACAGGACATATGATCAGATGTATGTA 57.344 34.615 32.08 10.28 42.61 2.29
2003 5326 5.358160 GCAAGGGAGCTACAAATTGAGTAAT 59.642 40.000 10.94 0.00 0.00 1.89
2027 5353 3.261390 AGAGCTCTGAAGAAGCATGAAGT 59.739 43.478 17.42 0.00 0.00 3.01
2043 5369 6.994496 AGCATGAAGTAGCATATTAAGCTGAA 59.006 34.615 0.00 0.00 43.33 3.02
2181 5511 4.019858 TGTTCAGTTGATTGTTTGGTCCA 58.980 39.130 0.00 0.00 0.00 4.02
2183 5513 5.128499 TGTTCAGTTGATTGTTTGGTCCATT 59.872 36.000 0.00 0.00 0.00 3.16
2226 5556 3.694566 ACAGTTGGTGACTCTGTTTTTCC 59.305 43.478 0.00 0.00 40.97 3.13
2234 5564 2.945668 GACTCTGTTTTTCCTGTGCTGT 59.054 45.455 0.00 0.00 0.00 4.40
2250 5580 6.256539 CCTGTGCTGTGTATATACTTTCTGTG 59.743 42.308 13.89 0.00 0.00 3.66
2307 5637 2.672414 GTGCTGACACCTACTCCCT 58.328 57.895 0.00 0.00 41.21 4.20
2308 5638 0.533032 GTGCTGACACCTACTCCCTC 59.467 60.000 0.00 0.00 41.21 4.30
2309 5639 0.614979 TGCTGACACCTACTCCCTCC 60.615 60.000 0.00 0.00 0.00 4.30
2310 5640 1.668101 GCTGACACCTACTCCCTCCG 61.668 65.000 0.00 0.00 0.00 4.63
2311 5641 0.323542 CTGACACCTACTCCCTCCGT 60.324 60.000 0.00 0.00 0.00 4.69
2312 5642 0.113776 TGACACCTACTCCCTCCGTT 59.886 55.000 0.00 0.00 0.00 4.44
2313 5643 0.816373 GACACCTACTCCCTCCGTTC 59.184 60.000 0.00 0.00 0.00 3.95
2314 5644 0.614134 ACACCTACTCCCTCCGTTCC 60.614 60.000 0.00 0.00 0.00 3.62
2315 5645 0.324460 CACCTACTCCCTCCGTTCCT 60.324 60.000 0.00 0.00 0.00 3.36
2316 5646 1.064166 CACCTACTCCCTCCGTTCCTA 60.064 57.143 0.00 0.00 0.00 2.94
2317 5647 1.642762 ACCTACTCCCTCCGTTCCTAA 59.357 52.381 0.00 0.00 0.00 2.69
2318 5648 2.043526 ACCTACTCCCTCCGTTCCTAAA 59.956 50.000 0.00 0.00 0.00 1.85
2319 5649 3.306613 CCTACTCCCTCCGTTCCTAAAT 58.693 50.000 0.00 0.00 0.00 1.40
2320 5650 4.078980 ACCTACTCCCTCCGTTCCTAAATA 60.079 45.833 0.00 0.00 0.00 1.40
2321 5651 4.897670 CCTACTCCCTCCGTTCCTAAATAA 59.102 45.833 0.00 0.00 0.00 1.40
2322 5652 5.543020 CCTACTCCCTCCGTTCCTAAATAAT 59.457 44.000 0.00 0.00 0.00 1.28
2323 5653 5.970501 ACTCCCTCCGTTCCTAAATAATT 57.029 39.130 0.00 0.00 0.00 1.40
2324 5654 5.681639 ACTCCCTCCGTTCCTAAATAATTG 58.318 41.667 0.00 0.00 0.00 2.32
2325 5655 5.191124 ACTCCCTCCGTTCCTAAATAATTGT 59.809 40.000 0.00 0.00 0.00 2.71
2326 5656 5.677567 TCCCTCCGTTCCTAAATAATTGTC 58.322 41.667 0.00 0.00 0.00 3.18
2327 5657 5.427481 TCCCTCCGTTCCTAAATAATTGTCT 59.573 40.000 0.00 0.00 0.00 3.41
2328 5658 6.069847 TCCCTCCGTTCCTAAATAATTGTCTT 60.070 38.462 0.00 0.00 0.00 3.01
2329 5659 6.038271 CCCTCCGTTCCTAAATAATTGTCTTG 59.962 42.308 0.00 0.00 0.00 3.02
2330 5660 6.821665 CCTCCGTTCCTAAATAATTGTCTTGA 59.178 38.462 0.00 0.00 0.00 3.02
2331 5661 7.011482 CCTCCGTTCCTAAATAATTGTCTTGAG 59.989 40.741 0.00 0.00 0.00 3.02
2332 5662 7.617225 TCCGTTCCTAAATAATTGTCTTGAGA 58.383 34.615 0.00 0.00 0.00 3.27
2333 5663 8.265055 TCCGTTCCTAAATAATTGTCTTGAGAT 58.735 33.333 0.00 0.00 0.00 2.75
2334 5664 8.338259 CCGTTCCTAAATAATTGTCTTGAGATG 58.662 37.037 0.00 0.00 0.00 2.90
2335 5665 8.338259 CGTTCCTAAATAATTGTCTTGAGATGG 58.662 37.037 0.00 0.00 0.00 3.51
2336 5666 7.807977 TCCTAAATAATTGTCTTGAGATGGC 57.192 36.000 0.00 0.00 0.00 4.40
2337 5667 7.577303 TCCTAAATAATTGTCTTGAGATGGCT 58.423 34.615 0.00 0.00 0.00 4.75
2338 5668 8.713971 TCCTAAATAATTGTCTTGAGATGGCTA 58.286 33.333 0.00 0.00 0.00 3.93
2339 5669 8.997323 CCTAAATAATTGTCTTGAGATGGCTAG 58.003 37.037 0.00 0.00 0.00 3.42
2340 5670 9.770097 CTAAATAATTGTCTTGAGATGGCTAGA 57.230 33.333 0.00 0.00 0.00 2.43
2342 5672 9.466497 AAATAATTGTCTTGAGATGGCTAGAAA 57.534 29.630 0.00 0.00 0.00 2.52
2343 5673 6.998968 AATTGTCTTGAGATGGCTAGAAAG 57.001 37.500 0.00 0.00 0.00 2.62
2344 5674 5.745312 TTGTCTTGAGATGGCTAGAAAGA 57.255 39.130 0.00 0.00 0.00 2.52
2345 5675 5.078411 TGTCTTGAGATGGCTAGAAAGAC 57.922 43.478 0.00 6.44 0.00 3.01
2347 5677 5.012046 TGTCTTGAGATGGCTAGAAAGACAA 59.988 40.000 12.28 0.00 46.32 3.18
2348 5678 6.112058 GTCTTGAGATGGCTAGAAAGACAAT 58.888 40.000 8.15 0.00 46.32 2.71
2349 5679 6.597280 GTCTTGAGATGGCTAGAAAGACAATT 59.403 38.462 8.15 0.00 46.32 2.32
2350 5680 7.766278 GTCTTGAGATGGCTAGAAAGACAATTA 59.234 37.037 8.15 0.00 46.32 1.40
2351 5681 8.489489 TCTTGAGATGGCTAGAAAGACAATTAT 58.511 33.333 0.00 0.00 46.32 1.28
2352 5682 9.118300 CTTGAGATGGCTAGAAAGACAATTATT 57.882 33.333 0.00 0.00 46.32 1.40
2353 5683 9.466497 TTGAGATGGCTAGAAAGACAATTATTT 57.534 29.630 0.00 0.00 46.32 1.40
2354 5684 8.896744 TGAGATGGCTAGAAAGACAATTATTTG 58.103 33.333 0.00 0.00 46.32 2.32
2355 5685 9.113838 GAGATGGCTAGAAAGACAATTATTTGA 57.886 33.333 4.42 0.00 46.32 2.69
2356 5686 9.118300 AGATGGCTAGAAAGACAATTATTTGAG 57.882 33.333 4.42 0.00 46.32 3.02
2357 5687 9.113838 GATGGCTAGAAAGACAATTATTTGAGA 57.886 33.333 4.42 0.00 46.32 3.27
2358 5688 8.862325 TGGCTAGAAAGACAATTATTTGAGAA 57.138 30.769 4.42 0.00 38.01 2.87
2359 5689 8.730680 TGGCTAGAAAGACAATTATTTGAGAAC 58.269 33.333 4.42 0.00 38.01 3.01
2360 5690 7.905493 GGCTAGAAAGACAATTATTTGAGAACG 59.095 37.037 4.42 0.00 36.64 3.95
2361 5691 7.905493 GCTAGAAAGACAATTATTTGAGAACGG 59.095 37.037 4.42 0.00 36.64 4.44
2362 5692 7.979444 AGAAAGACAATTATTTGAGAACGGA 57.021 32.000 4.42 0.00 36.64 4.69
2363 5693 8.034058 AGAAAGACAATTATTTGAGAACGGAG 57.966 34.615 4.42 0.00 36.64 4.63
2364 5694 6.743575 AAGACAATTATTTGAGAACGGAGG 57.256 37.500 4.42 0.00 36.64 4.30
2365 5695 5.186198 AGACAATTATTTGAGAACGGAGGG 58.814 41.667 4.42 0.00 36.64 4.30
2366 5696 5.045869 AGACAATTATTTGAGAACGGAGGGA 60.046 40.000 4.42 0.00 36.64 4.20
2367 5697 5.186198 ACAATTATTTGAGAACGGAGGGAG 58.814 41.667 4.42 0.00 36.64 4.30
2368 5698 5.186198 CAATTATTTGAGAACGGAGGGAGT 58.814 41.667 0.00 0.00 34.60 3.85
2369 5699 6.070424 ACAATTATTTGAGAACGGAGGGAGTA 60.070 38.462 4.42 0.00 36.64 2.59
2370 5700 3.889520 ATTTGAGAACGGAGGGAGTAC 57.110 47.619 0.00 0.00 0.00 2.73
2371 5701 2.599408 TTGAGAACGGAGGGAGTACT 57.401 50.000 0.00 0.00 0.00 2.73
2372 5702 2.599408 TGAGAACGGAGGGAGTACTT 57.401 50.000 0.00 0.00 0.00 2.24
2373 5703 2.885616 TGAGAACGGAGGGAGTACTTT 58.114 47.619 0.00 0.00 0.00 2.66
2374 5704 3.236896 TGAGAACGGAGGGAGTACTTTT 58.763 45.455 0.00 0.00 0.00 2.27
2375 5705 3.644738 TGAGAACGGAGGGAGTACTTTTT 59.355 43.478 0.00 0.00 0.00 1.94
2376 5706 4.834496 TGAGAACGGAGGGAGTACTTTTTA 59.166 41.667 0.00 0.00 0.00 1.52
2377 5707 5.482878 TGAGAACGGAGGGAGTACTTTTTAT 59.517 40.000 0.00 0.00 0.00 1.40
2378 5708 6.664816 TGAGAACGGAGGGAGTACTTTTTATA 59.335 38.462 0.00 0.00 0.00 0.98
2379 5709 7.110043 AGAACGGAGGGAGTACTTTTTATAG 57.890 40.000 0.00 0.00 0.00 1.31
2380 5710 5.273674 ACGGAGGGAGTACTTTTTATAGC 57.726 43.478 0.00 0.00 0.00 2.97
2381 5711 4.713321 ACGGAGGGAGTACTTTTTATAGCA 59.287 41.667 0.00 0.00 0.00 3.49
2382 5712 5.163437 ACGGAGGGAGTACTTTTTATAGCAG 60.163 44.000 0.00 0.00 0.00 4.24
2383 5713 5.057819 GGAGGGAGTACTTTTTATAGCAGC 58.942 45.833 0.00 0.00 0.00 5.25
2384 5714 5.396436 GGAGGGAGTACTTTTTATAGCAGCA 60.396 44.000 0.00 0.00 0.00 4.41
2385 5715 6.253946 AGGGAGTACTTTTTATAGCAGCAT 57.746 37.500 0.00 0.00 0.00 3.79
2386 5716 6.058183 AGGGAGTACTTTTTATAGCAGCATG 58.942 40.000 0.00 0.00 40.87 4.06
2387 5717 6.055588 GGGAGTACTTTTTATAGCAGCATGA 58.944 40.000 0.00 0.00 39.69 3.07
2388 5718 6.203723 GGGAGTACTTTTTATAGCAGCATGAG 59.796 42.308 0.00 0.00 39.69 2.90
2389 5719 6.203723 GGAGTACTTTTTATAGCAGCATGAGG 59.796 42.308 0.00 0.00 39.69 3.86
2390 5720 6.889198 AGTACTTTTTATAGCAGCATGAGGA 58.111 36.000 0.00 0.00 39.69 3.71
2391 5721 7.512992 AGTACTTTTTATAGCAGCATGAGGAT 58.487 34.615 0.00 0.00 39.69 3.24
2392 5722 6.874288 ACTTTTTATAGCAGCATGAGGATC 57.126 37.500 0.00 0.00 39.69 3.36
2393 5723 5.767168 ACTTTTTATAGCAGCATGAGGATCC 59.233 40.000 2.48 2.48 39.69 3.36
2394 5724 5.573380 TTTTATAGCAGCATGAGGATCCT 57.427 39.130 16.13 16.13 39.69 3.24
2395 5725 5.573380 TTTATAGCAGCATGAGGATCCTT 57.427 39.130 17.42 0.00 39.69 3.36
2396 5726 5.573380 TTATAGCAGCATGAGGATCCTTT 57.427 39.130 17.42 3.80 39.69 3.11
2397 5727 2.822707 AGCAGCATGAGGATCCTTTT 57.177 45.000 17.42 3.39 39.69 2.27
2398 5728 2.652590 AGCAGCATGAGGATCCTTTTC 58.347 47.619 17.42 3.88 39.69 2.29
2399 5729 1.680207 GCAGCATGAGGATCCTTTTCC 59.320 52.381 17.42 3.15 39.69 3.13
2400 5730 2.947243 GCAGCATGAGGATCCTTTTCCA 60.947 50.000 17.42 9.68 39.69 3.53
2401 5731 3.563223 CAGCATGAGGATCCTTTTCCAT 58.437 45.455 17.42 11.75 39.69 3.41
2402 5732 3.568853 CAGCATGAGGATCCTTTTCCATC 59.431 47.826 17.42 8.64 39.69 3.51
2403 5733 3.203710 AGCATGAGGATCCTTTTCCATCA 59.796 43.478 17.42 7.94 38.32 3.07
2404 5734 3.956199 GCATGAGGATCCTTTTCCATCAA 59.044 43.478 17.42 0.00 38.32 2.57
2405 5735 4.403432 GCATGAGGATCCTTTTCCATCAAA 59.597 41.667 17.42 0.00 38.32 2.69
2406 5736 5.680665 GCATGAGGATCCTTTTCCATCAAAC 60.681 44.000 17.42 0.00 38.32 2.93
2407 5737 4.344104 TGAGGATCCTTTTCCATCAAACC 58.656 43.478 17.42 0.00 38.32 3.27
2408 5738 3.356290 AGGATCCTTTTCCATCAAACCG 58.644 45.455 9.02 0.00 38.32 4.44
2409 5739 3.089284 GGATCCTTTTCCATCAAACCGT 58.911 45.455 3.84 0.00 35.72 4.83
2410 5740 4.018779 AGGATCCTTTTCCATCAAACCGTA 60.019 41.667 9.02 0.00 38.32 4.02
2411 5741 4.887655 GGATCCTTTTCCATCAAACCGTAT 59.112 41.667 3.84 0.00 35.72 3.06
2412 5742 6.059484 GGATCCTTTTCCATCAAACCGTATA 58.941 40.000 3.84 0.00 35.72 1.47
2413 5743 6.017357 GGATCCTTTTCCATCAAACCGTATAC 60.017 42.308 3.84 0.00 35.72 1.47
2414 5744 5.806818 TCCTTTTCCATCAAACCGTATACA 58.193 37.500 3.32 0.00 0.00 2.29
2415 5745 5.644636 TCCTTTTCCATCAAACCGTATACAC 59.355 40.000 3.32 0.00 0.00 2.90
2416 5746 5.413213 CCTTTTCCATCAAACCGTATACACA 59.587 40.000 3.32 0.00 0.00 3.72
2417 5747 6.094881 CCTTTTCCATCAAACCGTATACACAT 59.905 38.462 3.32 0.00 0.00 3.21
2418 5748 7.362574 CCTTTTCCATCAAACCGTATACACATT 60.363 37.037 3.32 0.00 0.00 2.71
2419 5749 8.563123 TTTTCCATCAAACCGTATACACATTA 57.437 30.769 3.32 0.00 0.00 1.90
2420 5750 8.740123 TTTCCATCAAACCGTATACACATTAT 57.260 30.769 3.32 0.00 0.00 1.28
2421 5751 9.833917 TTTCCATCAAACCGTATACACATTATA 57.166 29.630 3.32 0.00 0.00 0.98
2422 5752 8.821147 TCCATCAAACCGTATACACATTATAC 57.179 34.615 3.32 0.00 0.00 1.47
2423 5753 7.874016 TCCATCAAACCGTATACACATTATACC 59.126 37.037 3.32 0.00 0.00 2.73
2424 5754 7.118680 CCATCAAACCGTATACACATTATACCC 59.881 40.741 3.32 0.00 0.00 3.69
2425 5755 7.122138 TCAAACCGTATACACATTATACCCA 57.878 36.000 3.32 0.00 0.00 4.51
2426 5756 7.211573 TCAAACCGTATACACATTATACCCAG 58.788 38.462 3.32 0.00 0.00 4.45
2427 5757 6.736110 AACCGTATACACATTATACCCAGT 57.264 37.500 3.32 0.00 0.00 4.00
2428 5758 6.736110 ACCGTATACACATTATACCCAGTT 57.264 37.500 3.32 0.00 0.00 3.16
2429 5759 7.128234 ACCGTATACACATTATACCCAGTTT 57.872 36.000 3.32 0.00 0.00 2.66
2430 5760 7.567458 ACCGTATACACATTATACCCAGTTTT 58.433 34.615 3.32 0.00 0.00 2.43
2431 5761 8.048514 ACCGTATACACATTATACCCAGTTTTT 58.951 33.333 3.32 0.00 0.00 1.94
2432 5762 9.545105 CCGTATACACATTATACCCAGTTTTTA 57.455 33.333 3.32 0.00 0.00 1.52
2464 5794 4.782019 AAAAATAGCGCAAGGAACATGA 57.218 36.364 11.47 0.00 38.28 3.07
2465 5795 4.989279 AAAATAGCGCAAGGAACATGAT 57.011 36.364 11.47 0.00 38.28 2.45
2466 5796 4.989279 AAATAGCGCAAGGAACATGATT 57.011 36.364 11.47 0.00 38.28 2.57
2467 5797 4.558538 AATAGCGCAAGGAACATGATTC 57.441 40.909 11.47 0.00 38.28 2.52
2468 5798 0.729116 AGCGCAAGGAACATGATTCG 59.271 50.000 11.47 0.00 38.28 3.34
2469 5799 0.726827 GCGCAAGGAACATGATTCGA 59.273 50.000 0.30 0.00 38.28 3.71
2470 5800 1.529826 GCGCAAGGAACATGATTCGAC 60.530 52.381 0.30 0.00 38.28 4.20
2471 5801 1.062587 CGCAAGGAACATGATTCGACC 59.937 52.381 0.00 0.00 0.00 4.79
2472 5802 2.359900 GCAAGGAACATGATTCGACCT 58.640 47.619 0.00 0.00 0.00 3.85
2473 5803 2.352960 GCAAGGAACATGATTCGACCTC 59.647 50.000 0.00 0.00 0.00 3.85
2474 5804 2.586258 AGGAACATGATTCGACCTCG 57.414 50.000 0.00 0.00 41.45 4.63
2485 5815 0.601558 TCGACCTCGAGACCTTTTGG 59.398 55.000 15.71 0.00 44.22 3.28
2499 5829 4.367039 CCTTTTGGTCTAAGGAGAACCA 57.633 45.455 0.00 0.00 44.01 3.67
2500 5830 4.072839 CCTTTTGGTCTAAGGAGAACCAC 58.927 47.826 0.00 0.00 44.01 4.16
2501 5831 4.445735 CCTTTTGGTCTAAGGAGAACCACA 60.446 45.833 0.00 0.00 44.01 4.17
2502 5832 3.764237 TTGGTCTAAGGAGAACCACAC 57.236 47.619 0.00 0.00 38.81 3.82
2503 5833 2.972348 TGGTCTAAGGAGAACCACACT 58.028 47.619 0.00 0.00 38.81 3.55
2504 5834 4.122337 TGGTCTAAGGAGAACCACACTA 57.878 45.455 0.00 0.00 38.81 2.74
2505 5835 4.485875 TGGTCTAAGGAGAACCACACTAA 58.514 43.478 0.00 0.00 38.81 2.24
2506 5836 4.282703 TGGTCTAAGGAGAACCACACTAAC 59.717 45.833 0.00 0.00 38.81 2.34
2507 5837 4.322574 GGTCTAAGGAGAACCACACTAACC 60.323 50.000 0.00 0.00 38.94 2.85
2508 5838 4.282703 GTCTAAGGAGAACCACACTAACCA 59.717 45.833 0.00 0.00 38.94 3.67
2509 5839 4.903049 TCTAAGGAGAACCACACTAACCAA 59.097 41.667 0.00 0.00 38.94 3.67
2510 5840 3.487120 AGGAGAACCACACTAACCAAC 57.513 47.619 0.00 0.00 38.94 3.77
2511 5841 2.105993 AGGAGAACCACACTAACCAACC 59.894 50.000 0.00 0.00 38.94 3.77
2512 5842 2.158726 GGAGAACCACACTAACCAACCA 60.159 50.000 0.00 0.00 35.97 3.67
2513 5843 3.139077 GAGAACCACACTAACCAACCAG 58.861 50.000 0.00 0.00 0.00 4.00
2514 5844 2.158667 AGAACCACACTAACCAACCAGG 60.159 50.000 0.00 0.00 45.67 4.45
2515 5845 0.179001 ACCACACTAACCAACCAGGC 60.179 55.000 0.00 0.00 43.14 4.85
2516 5846 0.179004 CCACACTAACCAACCAGGCA 60.179 55.000 0.00 0.00 43.14 4.75
2517 5847 1.686355 CACACTAACCAACCAGGCAA 58.314 50.000 0.00 0.00 43.14 4.52
2518 5848 1.336755 CACACTAACCAACCAGGCAAC 59.663 52.381 0.00 0.00 43.14 4.17
2519 5849 0.958822 CACTAACCAACCAGGCAACC 59.041 55.000 0.00 0.00 43.14 3.77
2520 5850 0.553819 ACTAACCAACCAGGCAACCA 59.446 50.000 0.00 0.00 43.14 3.67
2521 5851 1.146982 ACTAACCAACCAGGCAACCAT 59.853 47.619 0.00 0.00 43.14 3.55
2522 5852 2.377193 ACTAACCAACCAGGCAACCATA 59.623 45.455 0.00 0.00 43.14 2.74
2523 5853 2.390225 AACCAACCAGGCAACCATAA 57.610 45.000 0.00 0.00 43.14 1.90
2524 5854 2.621556 ACCAACCAGGCAACCATAAT 57.378 45.000 0.00 0.00 43.14 1.28
2525 5855 2.178580 ACCAACCAGGCAACCATAATG 58.821 47.619 0.00 0.00 43.14 1.90
2526 5856 1.134729 CCAACCAGGCAACCATAATGC 60.135 52.381 0.00 0.00 43.08 3.56
2527 5857 1.826720 CAACCAGGCAACCATAATGCT 59.173 47.619 0.00 0.00 43.34 3.79
2528 5858 2.234414 CAACCAGGCAACCATAATGCTT 59.766 45.455 0.00 0.00 43.34 3.91
2529 5859 1.826720 ACCAGGCAACCATAATGCTTG 59.173 47.619 3.92 3.92 46.78 4.01
2530 5860 1.472026 CCAGGCAACCATAATGCTTGC 60.472 52.381 5.24 3.44 46.12 4.01
2531 5861 0.457035 AGGCAACCATAATGCTTGCG 59.543 50.000 5.67 0.00 43.34 4.85
2532 5862 1.147557 GGCAACCATAATGCTTGCGC 61.148 55.000 0.00 0.00 43.34 6.09
2533 5863 1.147557 GCAACCATAATGCTTGCGCC 61.148 55.000 4.18 0.00 40.64 6.53
2534 5864 0.457035 CAACCATAATGCTTGCGCCT 59.543 50.000 4.18 0.00 34.43 5.52
2535 5865 1.675483 CAACCATAATGCTTGCGCCTA 59.325 47.619 4.18 0.00 34.43 3.93
2536 5866 2.276732 ACCATAATGCTTGCGCCTAT 57.723 45.000 4.18 0.00 34.43 2.57
2537 5867 2.586425 ACCATAATGCTTGCGCCTATT 58.414 42.857 4.18 2.81 34.43 1.73
2538 5868 2.958355 ACCATAATGCTTGCGCCTATTT 59.042 40.909 4.18 0.00 34.43 1.40
2539 5869 4.141287 ACCATAATGCTTGCGCCTATTTA 58.859 39.130 4.18 0.00 34.43 1.40
2540 5870 4.023193 ACCATAATGCTTGCGCCTATTTAC 60.023 41.667 4.18 0.00 34.43 2.01
2541 5871 4.475944 CATAATGCTTGCGCCTATTTACC 58.524 43.478 4.18 0.00 34.43 2.85
2542 5872 2.348411 ATGCTTGCGCCTATTTACCT 57.652 45.000 4.18 0.00 34.43 3.08
2543 5873 1.663695 TGCTTGCGCCTATTTACCTC 58.336 50.000 4.18 0.00 34.43 3.85
2544 5874 1.065782 TGCTTGCGCCTATTTACCTCA 60.066 47.619 4.18 0.00 34.43 3.86
2545 5875 2.222027 GCTTGCGCCTATTTACCTCAT 58.778 47.619 4.18 0.00 0.00 2.90
2546 5876 2.618709 GCTTGCGCCTATTTACCTCATT 59.381 45.455 4.18 0.00 0.00 2.57
2547 5877 3.548818 GCTTGCGCCTATTTACCTCATTG 60.549 47.826 4.18 0.00 0.00 2.82
2548 5878 1.946768 TGCGCCTATTTACCTCATTGC 59.053 47.619 4.18 0.00 0.00 3.56
2549 5879 1.069906 GCGCCTATTTACCTCATTGCG 60.070 52.381 0.00 0.00 43.26 4.85
2550 5880 1.531149 CGCCTATTTACCTCATTGCGG 59.469 52.381 0.00 0.00 37.33 5.69
2551 5881 2.805295 CGCCTATTTACCTCATTGCGGA 60.805 50.000 0.00 0.00 37.33 5.54
2552 5882 3.211045 GCCTATTTACCTCATTGCGGAA 58.789 45.455 0.00 0.00 0.00 4.30
2553 5883 3.003378 GCCTATTTACCTCATTGCGGAAC 59.997 47.826 0.00 0.00 0.00 3.62
2554 5884 3.564225 CCTATTTACCTCATTGCGGAACC 59.436 47.826 0.00 0.00 0.00 3.62
2555 5885 2.570415 TTTACCTCATTGCGGAACCA 57.430 45.000 0.00 0.00 0.00 3.67
2556 5886 2.107950 TTACCTCATTGCGGAACCAG 57.892 50.000 0.00 0.00 0.00 4.00
2557 5887 0.981183 TACCTCATTGCGGAACCAGT 59.019 50.000 0.00 0.00 0.00 4.00
2558 5888 0.321653 ACCTCATTGCGGAACCAGTC 60.322 55.000 0.00 0.00 0.00 3.51
2559 5889 1.026718 CCTCATTGCGGAACCAGTCC 61.027 60.000 0.00 0.00 43.90 3.85
2560 5890 0.036010 CTCATTGCGGAACCAGTCCT 60.036 55.000 0.00 0.00 45.36 3.85
2561 5891 0.400213 TCATTGCGGAACCAGTCCTT 59.600 50.000 0.00 0.00 45.36 3.36
2562 5892 1.202879 TCATTGCGGAACCAGTCCTTT 60.203 47.619 0.00 0.00 45.36 3.11
2563 5893 1.613437 CATTGCGGAACCAGTCCTTTT 59.387 47.619 0.00 0.00 45.36 2.27
2564 5894 2.642154 TTGCGGAACCAGTCCTTTTA 57.358 45.000 0.00 0.00 45.36 1.52
2565 5895 2.871096 TGCGGAACCAGTCCTTTTAT 57.129 45.000 0.00 0.00 45.36 1.40
2566 5896 2.706890 TGCGGAACCAGTCCTTTTATC 58.293 47.619 0.00 0.00 45.36 1.75
2567 5897 2.039216 TGCGGAACCAGTCCTTTTATCA 59.961 45.455 0.00 0.00 45.36 2.15
2568 5898 3.279434 GCGGAACCAGTCCTTTTATCAT 58.721 45.455 0.00 0.00 45.36 2.45
2569 5899 3.694566 GCGGAACCAGTCCTTTTATCATT 59.305 43.478 0.00 0.00 45.36 2.57
2570 5900 4.879545 GCGGAACCAGTCCTTTTATCATTA 59.120 41.667 0.00 0.00 45.36 1.90
2571 5901 5.531287 GCGGAACCAGTCCTTTTATCATTAT 59.469 40.000 0.00 0.00 45.36 1.28
2572 5902 6.039382 GCGGAACCAGTCCTTTTATCATTATT 59.961 38.462 0.00 0.00 45.36 1.40
2573 5903 7.416326 GCGGAACCAGTCCTTTTATCATTATTT 60.416 37.037 0.00 0.00 45.36 1.40
2574 5904 8.129211 CGGAACCAGTCCTTTTATCATTATTTC 58.871 37.037 0.00 0.00 45.36 2.17
2575 5905 9.190317 GGAACCAGTCCTTTTATCATTATTTCT 57.810 33.333 0.00 0.00 43.98 2.52
2578 5908 9.981460 ACCAGTCCTTTTATCATTATTTCTTCT 57.019 29.630 0.00 0.00 0.00 2.85
2658 5988 8.972458 AAAAGCCCACACTTATAAAATTTTGT 57.028 26.923 13.76 9.49 0.00 2.83
2659 5989 8.972458 AAAGCCCACACTTATAAAATTTTGTT 57.028 26.923 13.76 3.83 0.00 2.83
2660 5990 8.601845 AAGCCCACACTTATAAAATTTTGTTC 57.398 30.769 13.76 0.00 0.00 3.18
2661 5991 7.731054 AGCCCACACTTATAAAATTTTGTTCA 58.269 30.769 13.76 0.00 0.00 3.18
2662 5992 8.207545 AGCCCACACTTATAAAATTTTGTTCAA 58.792 29.630 13.76 0.00 0.00 2.69
2663 5993 8.831550 GCCCACACTTATAAAATTTTGTTCAAA 58.168 29.630 13.76 0.00 0.00 2.69
2788 6118 9.853555 AAAAATACTCACATCGATGCAATTAAA 57.146 25.926 25.11 5.69 0.00 1.52
2794 6124 9.507280 ACTCACATCGATGCAATTAAATTAAAG 57.493 29.630 25.11 6.20 0.00 1.85
2795 6125 9.507280 CTCACATCGATGCAATTAAATTAAAGT 57.493 29.630 25.11 0.00 0.00 2.66
2796 6126 9.853555 TCACATCGATGCAATTAAATTAAAGTT 57.146 25.926 25.11 0.00 0.00 2.66
2798 6128 9.853555 ACATCGATGCAATTAAATTAAAGTTCA 57.146 25.926 25.11 0.00 0.00 3.18
2817 6147 8.463930 AAGTTCATGAATAAAAGTTCTGGACA 57.536 30.769 12.12 0.00 0.00 4.02
2818 6148 8.641498 AGTTCATGAATAAAAGTTCTGGACAT 57.359 30.769 12.12 0.00 0.00 3.06
2819 6149 8.734386 AGTTCATGAATAAAAGTTCTGGACATC 58.266 33.333 12.12 0.00 0.00 3.06
2820 6150 8.734386 GTTCATGAATAAAAGTTCTGGACATCT 58.266 33.333 12.12 0.00 0.00 2.90
2821 6151 9.958180 TTCATGAATAAAAGTTCTGGACATCTA 57.042 29.630 3.38 0.00 0.00 1.98
2864 6194 2.919666 AAAAATCAATCAGCGACCGG 57.080 45.000 0.00 0.00 0.00 5.28
2865 6195 1.821216 AAAATCAATCAGCGACCGGT 58.179 45.000 6.92 6.92 0.00 5.28
2866 6196 1.821216 AAATCAATCAGCGACCGGTT 58.179 45.000 9.42 0.00 0.00 4.44
2867 6197 1.821216 AATCAATCAGCGACCGGTTT 58.179 45.000 9.42 0.00 0.00 3.27
2868 6198 2.684001 ATCAATCAGCGACCGGTTTA 57.316 45.000 9.42 0.00 0.00 2.01
2869 6199 2.684001 TCAATCAGCGACCGGTTTAT 57.316 45.000 9.42 0.00 0.00 1.40
2870 6200 2.980568 TCAATCAGCGACCGGTTTATT 58.019 42.857 9.42 1.68 0.00 1.40
2871 6201 2.675844 TCAATCAGCGACCGGTTTATTG 59.324 45.455 9.42 14.10 32.35 1.90
2872 6202 2.396590 ATCAGCGACCGGTTTATTGT 57.603 45.000 9.42 0.00 0.00 2.71
2873 6203 2.172851 TCAGCGACCGGTTTATTGTT 57.827 45.000 9.42 0.00 0.00 2.83
2874 6204 2.496111 TCAGCGACCGGTTTATTGTTT 58.504 42.857 9.42 0.00 0.00 2.83
2875 6205 2.224549 TCAGCGACCGGTTTATTGTTTG 59.775 45.455 9.42 0.00 0.00 2.93
2876 6206 2.031508 CAGCGACCGGTTTATTGTTTGT 60.032 45.455 9.42 0.00 0.00 2.83
2877 6207 2.619646 AGCGACCGGTTTATTGTTTGTT 59.380 40.909 9.42 0.00 0.00 2.83
2878 6208 3.067040 AGCGACCGGTTTATTGTTTGTTT 59.933 39.130 9.42 0.00 0.00 2.83
2879 6209 3.797796 GCGACCGGTTTATTGTTTGTTTT 59.202 39.130 9.42 0.00 0.00 2.43
2880 6210 4.268167 GCGACCGGTTTATTGTTTGTTTTT 59.732 37.500 9.42 0.00 0.00 1.94
2903 6233 9.487790 TTTTTGTTTCTTTCTCATTCTTGTTGT 57.512 25.926 0.00 0.00 0.00 3.32
2904 6234 9.487790 TTTTGTTTCTTTCTCATTCTTGTTGTT 57.512 25.926 0.00 0.00 0.00 2.83
2905 6235 9.487790 TTTGTTTCTTTCTCATTCTTGTTGTTT 57.512 25.926 0.00 0.00 0.00 2.83
2906 6236 9.487790 TTGTTTCTTTCTCATTCTTGTTGTTTT 57.512 25.926 0.00 0.00 0.00 2.43
2907 6237 9.487790 TGTTTCTTTCTCATTCTTGTTGTTTTT 57.512 25.926 0.00 0.00 0.00 1.94
2908 6238 9.958285 GTTTCTTTCTCATTCTTGTTGTTTTTC 57.042 29.630 0.00 0.00 0.00 2.29
2909 6239 7.969387 TCTTTCTCATTCTTGTTGTTTTTCG 57.031 32.000 0.00 0.00 0.00 3.46
2910 6240 6.972328 TCTTTCTCATTCTTGTTGTTTTTCGG 59.028 34.615 0.00 0.00 0.00 4.30
2911 6241 5.828299 TCTCATTCTTGTTGTTTTTCGGT 57.172 34.783 0.00 0.00 0.00 4.69
2912 6242 6.202516 TCTCATTCTTGTTGTTTTTCGGTT 57.797 33.333 0.00 0.00 0.00 4.44
2913 6243 6.626302 TCTCATTCTTGTTGTTTTTCGGTTT 58.374 32.000 0.00 0.00 0.00 3.27
2914 6244 7.093992 TCTCATTCTTGTTGTTTTTCGGTTTT 58.906 30.769 0.00 0.00 0.00 2.43
2915 6245 7.600752 TCTCATTCTTGTTGTTTTTCGGTTTTT 59.399 29.630 0.00 0.00 0.00 1.94
2979 6309 7.742556 AATGAACCCAAATTTTACCAACATG 57.257 32.000 0.00 0.00 0.00 3.21
2980 6310 6.240549 TGAACCCAAATTTTACCAACATGT 57.759 33.333 0.00 0.00 0.00 3.21
2981 6311 7.361457 TGAACCCAAATTTTACCAACATGTA 57.639 32.000 0.00 0.00 0.00 2.29
2982 6312 7.792032 TGAACCCAAATTTTACCAACATGTAA 58.208 30.769 0.00 0.00 0.00 2.41
2983 6313 7.928706 TGAACCCAAATTTTACCAACATGTAAG 59.071 33.333 0.00 0.00 32.63 2.34
2984 6314 6.764379 ACCCAAATTTTACCAACATGTAAGG 58.236 36.000 14.04 14.04 32.63 2.69
2985 6315 5.641636 CCCAAATTTTACCAACATGTAAGGC 59.358 40.000 15.22 0.00 32.63 4.35
2986 6316 6.226787 CCAAATTTTACCAACATGTAAGGCA 58.773 36.000 15.22 2.11 32.63 4.75
2987 6317 6.368516 CCAAATTTTACCAACATGTAAGGCAG 59.631 38.462 15.22 0.00 32.63 4.85
2988 6318 4.513198 TTTTACCAACATGTAAGGCAGC 57.487 40.909 15.22 0.00 32.63 5.25
2989 6319 3.433306 TTACCAACATGTAAGGCAGCT 57.567 42.857 15.22 1.42 0.00 4.24
2990 6320 1.826385 ACCAACATGTAAGGCAGCTC 58.174 50.000 15.22 0.00 0.00 4.09
2991 6321 1.073763 ACCAACATGTAAGGCAGCTCA 59.926 47.619 15.22 0.00 0.00 4.26
2992 6322 2.161855 CCAACATGTAAGGCAGCTCAA 58.838 47.619 0.00 0.00 0.00 3.02
2993 6323 2.163010 CCAACATGTAAGGCAGCTCAAG 59.837 50.000 0.00 0.00 0.00 3.02
2994 6324 2.119801 ACATGTAAGGCAGCTCAAGG 57.880 50.000 0.00 0.00 0.00 3.61
2995 6325 0.737219 CATGTAAGGCAGCTCAAGGC 59.263 55.000 0.00 0.00 42.19 4.35
2996 6326 0.329261 ATGTAAGGCAGCTCAAGGCA 59.671 50.000 0.00 0.00 44.79 4.75
2997 6327 0.321919 TGTAAGGCAGCTCAAGGCAG 60.322 55.000 0.00 0.00 44.79 4.85
2998 6328 1.028868 GTAAGGCAGCTCAAGGCAGG 61.029 60.000 0.00 0.00 44.79 4.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
29 30 2.171448 ACTGTGGCATCCTCTCCATAAC 59.829 50.000 0.00 0.00 34.47 1.89
34 35 0.107945 GACACTGTGGCATCCTCTCC 60.108 60.000 9.20 0.00 0.00 3.71
36 37 1.557269 GGGACACTGTGGCATCCTCT 61.557 60.000 16.72 0.00 0.00 3.69
64 65 1.474077 CCCAAATGTAACTCCTGCAGC 59.526 52.381 8.66 0.00 0.00 5.25
86 87 4.330944 TGATTCCGGTAATATCGCTGTT 57.669 40.909 0.00 0.00 0.00 3.16
90 91 2.351726 GGCATGATTCCGGTAATATCGC 59.648 50.000 0.00 3.70 0.00 4.58
117 118 1.065854 AGCTGGTCAAGTGTGCTATCC 60.066 52.381 0.00 0.00 31.71 2.59
140 141 1.348064 TGGGAGATGTCAAGAACGGT 58.652 50.000 0.00 0.00 0.00 4.83
157 158 3.279434 GCCTCCAGTTAGGTTGTTATGG 58.721 50.000 0.00 0.00 39.02 2.74
171 172 1.443407 CCTCGTGGTATGCCTCCAG 59.557 63.158 0.16 0.00 35.49 3.86
231 232 4.104383 ACAGGTCCATTGAGATTGTTGT 57.896 40.909 0.00 0.00 0.00 3.32
232 233 4.396166 GGTACAGGTCCATTGAGATTGTTG 59.604 45.833 0.00 0.00 0.00 3.33
233 234 4.042809 TGGTACAGGTCCATTGAGATTGTT 59.957 41.667 0.00 0.00 0.00 2.83
234 235 3.587061 TGGTACAGGTCCATTGAGATTGT 59.413 43.478 0.00 0.00 0.00 2.71
235 236 4.220693 TGGTACAGGTCCATTGAGATTG 57.779 45.455 0.00 0.00 0.00 2.67
251 252 2.551459 GCATGCCAATCTCAGATGGTAC 59.449 50.000 6.36 0.00 39.00 3.34
252 253 2.440627 AGCATGCCAATCTCAGATGGTA 59.559 45.455 15.66 0.00 39.00 3.25
253 254 1.214673 AGCATGCCAATCTCAGATGGT 59.785 47.619 15.66 0.00 39.00 3.55
265 266 2.233431 GGTCAAATTACCAAGCATGCCA 59.767 45.455 15.66 0.00 39.50 4.92
274 275 5.562635 AGTTCCAATACGGTCAAATTACCA 58.437 37.500 0.00 0.00 39.71 3.25
287 288 3.153919 TGTTGCCTCCAAGTTCCAATAC 58.846 45.455 0.00 0.00 0.00 1.89
294 295 3.152341 CTGAGATTGTTGCCTCCAAGTT 58.848 45.455 0.00 0.00 0.00 2.66
295 296 2.787994 CTGAGATTGTTGCCTCCAAGT 58.212 47.619 0.00 0.00 0.00 3.16
299 300 1.372087 CCGCTGAGATTGTTGCCTCC 61.372 60.000 0.00 0.00 0.00 4.30
303 304 1.660560 ATGCCCGCTGAGATTGTTGC 61.661 55.000 0.00 0.00 0.00 4.17
334 335 3.631686 TCAAATTCCCAAGCATACCGATG 59.368 43.478 0.00 0.00 36.02 3.84
349 422 5.595542 TCCAAGATCCATCATGGTCAAATTC 59.404 40.000 2.79 0.00 43.97 2.17
400 473 8.756376 TCGTTAAACTTGTAAAATGTTCTTCG 57.244 30.769 0.00 0.00 0.00 3.79
419 493 4.592942 TGTAGCTCCTCTAACCTCGTTAA 58.407 43.478 0.00 0.00 0.00 2.01
431 505 7.503902 AGAATTCCCATTTAAATGTAGCTCCTC 59.496 37.037 23.24 12.28 34.60 3.71
585 661 7.228314 TCCACTATACCTGTGCTTGATATAC 57.772 40.000 0.00 0.00 34.38 1.47
607 683 1.501582 ACCAGTCAGGAAGCCTATCC 58.498 55.000 0.00 0.00 41.22 2.59
652 728 5.868454 TCATTGTTTGAGATGTCCAGAGAA 58.132 37.500 0.00 0.00 0.00 2.87
654 730 6.564709 TTTCATTGTTTGAGATGTCCAGAG 57.435 37.500 0.00 0.00 35.27 3.35
667 743 3.069443 ACCTGCCGTTGATTTCATTGTTT 59.931 39.130 0.00 0.00 0.00 2.83
765 841 7.440255 CCACGTAGGTAATATTTCTTGGTAAGG 59.560 40.741 0.00 0.00 0.00 2.69
786 862 3.131396 GAGTTTTGAGACATGTCCACGT 58.869 45.455 22.21 3.38 0.00 4.49
788 864 3.744660 AGGAGTTTTGAGACATGTCCAC 58.255 45.455 22.21 16.42 0.00 4.02
800 876 6.591448 GGCAAATTTCCAGATAAGGAGTTTTG 59.409 38.462 11.92 11.92 40.55 2.44
808 884 7.098477 TGTTTGATGGCAAATTTCCAGATAAG 58.902 34.615 12.76 0.00 45.01 1.73
835 911 2.028112 TGAACTCAAATCTGGAGTCCCG 60.028 50.000 6.74 0.00 44.50 5.14
883 959 4.526262 CAGAGAGATTCGGGAATATGACCT 59.474 45.833 0.00 0.00 0.00 3.85
931 1008 7.039882 CCCTCGAAAAGATTGCTACTTAAGTA 58.960 38.462 14.52 14.52 0.00 2.24
975 1052 1.800805 AGTCAATGTGCTTCACCTCG 58.199 50.000 0.00 0.00 32.73 4.63
977 1054 3.817647 GAGAAAGTCAATGTGCTTCACCT 59.182 43.478 0.00 0.00 32.73 4.00
1054 4355 5.649831 ACAAATCTAGAGCCTTCAATTGTCC 59.350 40.000 5.13 0.00 0.00 4.02
1075 4376 7.789273 TTCCAGAAAAACTATTACGTGACAA 57.211 32.000 0.00 0.00 0.00 3.18
1077 4378 7.858583 ACTTTCCAGAAAAACTATTACGTGAC 58.141 34.615 0.00 0.00 0.00 3.67
1100 4401 2.173519 CTCCAATCCACAATGGCAACT 58.826 47.619 0.00 0.00 37.47 3.16
1160 4461 2.880167 GCTGGGATTTCTCCGGAAAACT 60.880 50.000 5.23 0.00 43.51 2.66
1199 4500 1.407437 GGTTCAGATGGTGAAGGCGAT 60.407 52.381 0.00 0.00 46.18 4.58
1227 4529 2.418368 TGCCGCCAGATAAGTCATTT 57.582 45.000 0.00 0.00 0.00 2.32
1244 4546 3.647824 GCAGATGCCTCGGTATGC 58.352 61.111 0.00 0.00 34.31 3.14
1261 4563 0.171007 GTCATGGCCGTCACATTTGG 59.829 55.000 0.00 0.00 0.00 3.28
1323 4646 8.109634 ACAGAGGAAAAATCATATGTACCAACT 58.890 33.333 1.90 0.00 0.00 3.16
1395 4718 6.660521 TGAAAGATAAGTCAATGCTCACCAAT 59.339 34.615 0.00 0.00 0.00 3.16
1428 4751 9.138596 ACTAATTCTTCTAGTATTCTCCCAGAC 57.861 37.037 0.00 0.00 0.00 3.51
1429 4752 9.716556 AACTAATTCTTCTAGTATTCTCCCAGA 57.283 33.333 0.00 0.00 0.00 3.86
1442 4765 6.256539 CGCATCAAGAGCAACTAATTCTTCTA 59.743 38.462 0.00 0.00 0.00 2.10
1450 4773 3.398406 TCAACGCATCAAGAGCAACTAA 58.602 40.909 0.00 0.00 0.00 2.24
1517 4840 0.899717 CTGCAAGGCCCCAAGCTTAA 60.900 55.000 0.00 0.00 43.05 1.85
1623 4946 8.037758 CCTGTTAGATTGTTATCAGACAAGTCT 58.962 37.037 0.00 0.00 42.28 3.24
1660 4983 4.268687 GTCAAGCTGACGTCCTGG 57.731 61.111 14.12 1.14 37.67 4.45
1797 5120 3.091545 GGTCATTGGCTCAAAGGAATGA 58.908 45.455 0.00 0.00 33.46 2.57
1947 5270 2.939460 GCCATGTAAGAACGGCAAAT 57.061 45.000 0.00 0.00 44.25 2.32
1980 5303 8.506168 TTATTACTCAATTTGTAGCTCCCTTG 57.494 34.615 0.00 0.00 0.00 3.61
2003 5326 5.046735 ACTTCATGCTTCTTCAGAGCTCTTA 60.047 40.000 15.27 2.68 0.00 2.10
2168 5498 4.255833 TGAAGCAATGGACCAAACAATC 57.744 40.909 0.00 0.00 0.00 2.67
2181 5511 4.756642 TGAAACTCTGAACGATGAAGCAAT 59.243 37.500 0.00 0.00 0.00 3.56
2183 5513 3.494626 GTGAAACTCTGAACGATGAAGCA 59.505 43.478 0.00 0.00 0.00 3.91
2213 5543 2.945668 ACAGCACAGGAAAAACAGAGTC 59.054 45.455 0.00 0.00 0.00 3.36
2226 5556 6.256539 CCACAGAAAGTATATACACAGCACAG 59.743 42.308 15.18 0.51 0.00 3.66
2234 5564 7.101054 GGTGTGTTCCACAGAAAGTATATACA 58.899 38.462 15.18 0.00 45.43 2.29
2272 5602 2.610859 CCCCTGTGGCCCTGTACT 60.611 66.667 0.00 0.00 0.00 2.73
2294 5624 0.816373 GAACGGAGGGAGTAGGTGTC 59.184 60.000 0.00 0.00 0.00 3.67
2304 5634 5.681639 AGACAATTATTTAGGAACGGAGGG 58.318 41.667 0.00 0.00 0.00 4.30
2305 5635 6.821665 TCAAGACAATTATTTAGGAACGGAGG 59.178 38.462 0.00 0.00 0.00 4.30
2306 5636 7.764443 TCTCAAGACAATTATTTAGGAACGGAG 59.236 37.037 0.00 0.00 0.00 4.63
2307 5637 7.617225 TCTCAAGACAATTATTTAGGAACGGA 58.383 34.615 0.00 0.00 0.00 4.69
2308 5638 7.843490 TCTCAAGACAATTATTTAGGAACGG 57.157 36.000 0.00 0.00 0.00 4.44
2309 5639 8.338259 CCATCTCAAGACAATTATTTAGGAACG 58.662 37.037 0.00 0.00 0.00 3.95
2310 5640 8.131731 GCCATCTCAAGACAATTATTTAGGAAC 58.868 37.037 0.00 0.00 0.00 3.62
2311 5641 8.055181 AGCCATCTCAAGACAATTATTTAGGAA 58.945 33.333 0.00 0.00 0.00 3.36
2312 5642 7.577303 AGCCATCTCAAGACAATTATTTAGGA 58.423 34.615 0.00 0.00 0.00 2.94
2313 5643 7.814264 AGCCATCTCAAGACAATTATTTAGG 57.186 36.000 0.00 0.00 0.00 2.69
2314 5644 9.770097 TCTAGCCATCTCAAGACAATTATTTAG 57.230 33.333 0.00 0.00 0.00 1.85
2316 5646 9.466497 TTTCTAGCCATCTCAAGACAATTATTT 57.534 29.630 0.00 0.00 0.00 1.40
2317 5647 9.118300 CTTTCTAGCCATCTCAAGACAATTATT 57.882 33.333 0.00 0.00 0.00 1.40
2318 5648 8.489489 TCTTTCTAGCCATCTCAAGACAATTAT 58.511 33.333 0.00 0.00 0.00 1.28
2319 5649 7.766278 GTCTTTCTAGCCATCTCAAGACAATTA 59.234 37.037 5.23 0.00 0.00 1.40
2320 5650 6.597280 GTCTTTCTAGCCATCTCAAGACAATT 59.403 38.462 5.23 0.00 0.00 2.32
2321 5651 6.112058 GTCTTTCTAGCCATCTCAAGACAAT 58.888 40.000 5.23 0.00 0.00 2.71
2322 5652 5.012046 TGTCTTTCTAGCCATCTCAAGACAA 59.988 40.000 9.53 0.00 30.96 3.18
2323 5653 4.528206 TGTCTTTCTAGCCATCTCAAGACA 59.472 41.667 8.17 8.17 0.00 3.41
2324 5654 5.078411 TGTCTTTCTAGCCATCTCAAGAC 57.922 43.478 0.00 0.00 0.00 3.01
2325 5655 5.745312 TTGTCTTTCTAGCCATCTCAAGA 57.255 39.130 0.00 0.00 0.00 3.02
2326 5656 6.998968 AATTGTCTTTCTAGCCATCTCAAG 57.001 37.500 0.00 0.00 0.00 3.02
2327 5657 9.466497 AAATAATTGTCTTTCTAGCCATCTCAA 57.534 29.630 0.00 0.00 0.00 3.02
2328 5658 8.896744 CAAATAATTGTCTTTCTAGCCATCTCA 58.103 33.333 0.00 0.00 0.00 3.27
2329 5659 9.113838 TCAAATAATTGTCTTTCTAGCCATCTC 57.886 33.333 0.00 0.00 37.79 2.75
2330 5660 9.118300 CTCAAATAATTGTCTTTCTAGCCATCT 57.882 33.333 0.00 0.00 37.79 2.90
2331 5661 9.113838 TCTCAAATAATTGTCTTTCTAGCCATC 57.886 33.333 0.00 0.00 37.79 3.51
2332 5662 9.466497 TTCTCAAATAATTGTCTTTCTAGCCAT 57.534 29.630 0.00 0.00 37.79 4.40
2333 5663 8.730680 GTTCTCAAATAATTGTCTTTCTAGCCA 58.269 33.333 0.00 0.00 37.79 4.75
2334 5664 7.905493 CGTTCTCAAATAATTGTCTTTCTAGCC 59.095 37.037 0.00 0.00 37.79 3.93
2335 5665 7.905493 CCGTTCTCAAATAATTGTCTTTCTAGC 59.095 37.037 0.00 0.00 37.79 3.42
2336 5666 9.151471 TCCGTTCTCAAATAATTGTCTTTCTAG 57.849 33.333 0.00 0.00 37.79 2.43
2337 5667 9.151471 CTCCGTTCTCAAATAATTGTCTTTCTA 57.849 33.333 0.00 0.00 37.79 2.10
2338 5668 7.119846 CCTCCGTTCTCAAATAATTGTCTTTCT 59.880 37.037 0.00 0.00 37.79 2.52
2339 5669 7.244192 CCTCCGTTCTCAAATAATTGTCTTTC 58.756 38.462 0.00 0.00 37.79 2.62
2340 5670 6.151144 CCCTCCGTTCTCAAATAATTGTCTTT 59.849 38.462 0.00 0.00 37.79 2.52
2341 5671 5.648092 CCCTCCGTTCTCAAATAATTGTCTT 59.352 40.000 0.00 0.00 37.79 3.01
2342 5672 5.045869 TCCCTCCGTTCTCAAATAATTGTCT 60.046 40.000 0.00 0.00 37.79 3.41
2343 5673 5.183228 TCCCTCCGTTCTCAAATAATTGTC 58.817 41.667 0.00 0.00 37.79 3.18
2344 5674 5.174037 TCCCTCCGTTCTCAAATAATTGT 57.826 39.130 0.00 0.00 37.79 2.71
2345 5675 5.186198 ACTCCCTCCGTTCTCAAATAATTG 58.814 41.667 0.00 0.00 37.92 2.32
2346 5676 5.437191 ACTCCCTCCGTTCTCAAATAATT 57.563 39.130 0.00 0.00 0.00 1.40
2347 5677 5.661759 AGTACTCCCTCCGTTCTCAAATAAT 59.338 40.000 0.00 0.00 0.00 1.28
2348 5678 5.021458 AGTACTCCCTCCGTTCTCAAATAA 58.979 41.667 0.00 0.00 0.00 1.40
2349 5679 4.607239 AGTACTCCCTCCGTTCTCAAATA 58.393 43.478 0.00 0.00 0.00 1.40
2350 5680 3.442076 AGTACTCCCTCCGTTCTCAAAT 58.558 45.455 0.00 0.00 0.00 2.32
2351 5681 2.885616 AGTACTCCCTCCGTTCTCAAA 58.114 47.619 0.00 0.00 0.00 2.69
2352 5682 2.599408 AGTACTCCCTCCGTTCTCAA 57.401 50.000 0.00 0.00 0.00 3.02
2353 5683 2.599408 AAGTACTCCCTCCGTTCTCA 57.401 50.000 0.00 0.00 0.00 3.27
2354 5684 3.957591 AAAAGTACTCCCTCCGTTCTC 57.042 47.619 0.00 0.00 0.00 2.87
2355 5685 6.406737 GCTATAAAAAGTACTCCCTCCGTTCT 60.407 42.308 0.00 0.00 0.00 3.01
2356 5686 5.752472 GCTATAAAAAGTACTCCCTCCGTTC 59.248 44.000 0.00 0.00 0.00 3.95
2357 5687 5.188359 TGCTATAAAAAGTACTCCCTCCGTT 59.812 40.000 0.00 0.00 0.00 4.44
2358 5688 4.713321 TGCTATAAAAAGTACTCCCTCCGT 59.287 41.667 0.00 0.00 0.00 4.69
2359 5689 5.272283 TGCTATAAAAAGTACTCCCTCCG 57.728 43.478 0.00 0.00 0.00 4.63
2360 5690 5.057819 GCTGCTATAAAAAGTACTCCCTCC 58.942 45.833 0.00 0.00 0.00 4.30
2361 5691 5.671493 TGCTGCTATAAAAAGTACTCCCTC 58.329 41.667 0.00 0.00 0.00 4.30
2362 5692 5.693769 TGCTGCTATAAAAAGTACTCCCT 57.306 39.130 0.00 0.00 0.00 4.20
2363 5693 6.055588 TCATGCTGCTATAAAAAGTACTCCC 58.944 40.000 0.00 0.00 0.00 4.30
2364 5694 6.203723 CCTCATGCTGCTATAAAAAGTACTCC 59.796 42.308 0.00 0.00 0.00 3.85
2365 5695 6.986817 TCCTCATGCTGCTATAAAAAGTACTC 59.013 38.462 0.00 0.00 0.00 2.59
2366 5696 6.889198 TCCTCATGCTGCTATAAAAAGTACT 58.111 36.000 0.00 0.00 0.00 2.73
2367 5697 7.095017 GGATCCTCATGCTGCTATAAAAAGTAC 60.095 40.741 3.84 0.00 0.00 2.73
2368 5698 6.936900 GGATCCTCATGCTGCTATAAAAAGTA 59.063 38.462 3.84 0.00 0.00 2.24
2369 5699 5.767168 GGATCCTCATGCTGCTATAAAAAGT 59.233 40.000 3.84 0.00 0.00 2.66
2370 5700 6.002704 AGGATCCTCATGCTGCTATAAAAAG 58.997 40.000 9.02 0.00 0.00 2.27
2371 5701 5.945310 AGGATCCTCATGCTGCTATAAAAA 58.055 37.500 9.02 0.00 0.00 1.94
2372 5702 5.573380 AGGATCCTCATGCTGCTATAAAA 57.427 39.130 9.02 0.00 0.00 1.52
2373 5703 5.573380 AAGGATCCTCATGCTGCTATAAA 57.427 39.130 16.52 0.00 29.49 1.40
2374 5704 5.573380 AAAGGATCCTCATGCTGCTATAA 57.427 39.130 16.52 0.00 29.49 0.98
2375 5705 5.513788 GGAAAAGGATCCTCATGCTGCTATA 60.514 44.000 16.52 0.00 36.50 1.31
2376 5706 4.396522 GAAAAGGATCCTCATGCTGCTAT 58.603 43.478 16.52 0.00 29.49 2.97
2377 5707 3.434167 GGAAAAGGATCCTCATGCTGCTA 60.434 47.826 16.52 0.00 36.50 3.49
2378 5708 2.652590 GAAAAGGATCCTCATGCTGCT 58.347 47.619 16.52 0.00 29.49 4.24
2379 5709 1.680207 GGAAAAGGATCCTCATGCTGC 59.320 52.381 16.52 0.00 36.50 5.25
2380 5710 3.008835 TGGAAAAGGATCCTCATGCTG 57.991 47.619 16.52 0.00 40.35 4.41
2381 5711 3.203710 TGATGGAAAAGGATCCTCATGCT 59.796 43.478 16.52 0.00 40.35 3.79
2382 5712 3.559069 TGATGGAAAAGGATCCTCATGC 58.441 45.455 16.52 12.73 40.35 4.06
2383 5713 5.163478 GGTTTGATGGAAAAGGATCCTCATG 60.163 44.000 16.52 0.00 40.35 3.07
2384 5714 4.958581 GGTTTGATGGAAAAGGATCCTCAT 59.041 41.667 16.52 14.04 40.35 2.90
2385 5715 4.344104 GGTTTGATGGAAAAGGATCCTCA 58.656 43.478 16.52 9.19 40.35 3.86
2386 5716 3.378427 CGGTTTGATGGAAAAGGATCCTC 59.622 47.826 16.52 2.35 40.35 3.71
2387 5717 3.245264 ACGGTTTGATGGAAAAGGATCCT 60.245 43.478 9.02 9.02 40.35 3.24
2388 5718 3.089284 ACGGTTTGATGGAAAAGGATCC 58.911 45.455 2.48 2.48 40.10 3.36
2389 5719 6.540914 TGTATACGGTTTGATGGAAAAGGATC 59.459 38.462 0.00 0.00 0.00 3.36
2390 5720 6.317893 GTGTATACGGTTTGATGGAAAAGGAT 59.682 38.462 0.00 0.00 0.00 3.24
2391 5721 5.644636 GTGTATACGGTTTGATGGAAAAGGA 59.355 40.000 0.00 0.00 0.00 3.36
2392 5722 5.413213 TGTGTATACGGTTTGATGGAAAAGG 59.587 40.000 0.00 0.00 0.00 3.11
2393 5723 6.489127 TGTGTATACGGTTTGATGGAAAAG 57.511 37.500 0.00 0.00 0.00 2.27
2394 5724 7.455641 AATGTGTATACGGTTTGATGGAAAA 57.544 32.000 0.00 0.00 0.00 2.29
2395 5725 8.740123 ATAATGTGTATACGGTTTGATGGAAA 57.260 30.769 0.00 0.00 0.00 3.13
2396 5726 9.263538 GTATAATGTGTATACGGTTTGATGGAA 57.736 33.333 0.00 0.00 0.00 3.53
2397 5727 7.874016 GGTATAATGTGTATACGGTTTGATGGA 59.126 37.037 0.00 0.00 32.65 3.41
2398 5728 7.118680 GGGTATAATGTGTATACGGTTTGATGG 59.881 40.741 0.00 0.00 32.65 3.51
2399 5729 7.658167 TGGGTATAATGTGTATACGGTTTGATG 59.342 37.037 0.00 0.00 32.65 3.07
2400 5730 7.737869 TGGGTATAATGTGTATACGGTTTGAT 58.262 34.615 0.00 0.00 32.65 2.57
2401 5731 7.122138 TGGGTATAATGTGTATACGGTTTGA 57.878 36.000 0.00 0.00 32.65 2.69
2402 5732 6.987992 ACTGGGTATAATGTGTATACGGTTTG 59.012 38.462 0.00 0.00 32.65 2.93
2403 5733 7.128234 ACTGGGTATAATGTGTATACGGTTT 57.872 36.000 0.00 0.00 32.65 3.27
2404 5734 6.736110 ACTGGGTATAATGTGTATACGGTT 57.264 37.500 0.00 0.00 32.65 4.44
2405 5735 6.736110 AACTGGGTATAATGTGTATACGGT 57.264 37.500 0.00 0.00 32.65 4.83
2406 5736 8.441312 AAAAACTGGGTATAATGTGTATACGG 57.559 34.615 0.00 0.00 32.65 4.02
2443 5773 4.782019 TCATGTTCCTTGCGCTATTTTT 57.218 36.364 9.73 0.00 0.00 1.94
2444 5774 4.989279 ATCATGTTCCTTGCGCTATTTT 57.011 36.364 9.73 0.00 0.00 1.82
2445 5775 4.496341 CGAATCATGTTCCTTGCGCTATTT 60.496 41.667 9.73 0.00 0.00 1.40
2446 5776 3.002656 CGAATCATGTTCCTTGCGCTATT 59.997 43.478 9.73 0.00 0.00 1.73
2447 5777 2.545526 CGAATCATGTTCCTTGCGCTAT 59.454 45.455 9.73 0.00 0.00 2.97
2448 5778 1.933181 CGAATCATGTTCCTTGCGCTA 59.067 47.619 9.73 0.00 0.00 4.26
2449 5779 0.729116 CGAATCATGTTCCTTGCGCT 59.271 50.000 9.73 0.00 0.00 5.92
2450 5780 0.726827 TCGAATCATGTTCCTTGCGC 59.273 50.000 0.00 0.00 0.00 6.09
2451 5781 1.062587 GGTCGAATCATGTTCCTTGCG 59.937 52.381 0.00 0.00 0.00 4.85
2452 5782 2.352960 GAGGTCGAATCATGTTCCTTGC 59.647 50.000 0.00 0.00 0.00 4.01
2453 5783 2.604914 CGAGGTCGAATCATGTTCCTTG 59.395 50.000 0.00 0.00 43.02 3.61
2454 5784 2.496070 TCGAGGTCGAATCATGTTCCTT 59.504 45.455 0.00 0.00 46.30 3.36
2455 5785 2.100197 TCGAGGTCGAATCATGTTCCT 58.900 47.619 0.00 0.00 46.30 3.36
2456 5786 2.579207 TCGAGGTCGAATCATGTTCC 57.421 50.000 0.00 0.00 46.30 3.62
2467 5797 0.317479 ACCAAAAGGTCTCGAGGTCG 59.683 55.000 13.56 0.00 41.45 4.79
2468 5798 1.619332 AGACCAAAAGGTCTCGAGGTC 59.381 52.381 13.56 10.25 44.85 3.85
2469 5799 1.718280 AGACCAAAAGGTCTCGAGGT 58.282 50.000 13.56 0.00 44.85 3.85
2470 5800 3.368531 CCTTAGACCAAAAGGTCTCGAGG 60.369 52.174 19.56 21.12 44.85 4.63
2471 5801 3.510360 TCCTTAGACCAAAAGGTCTCGAG 59.490 47.826 19.56 17.14 44.85 4.04
2472 5802 3.503365 TCCTTAGACCAAAAGGTCTCGA 58.497 45.455 19.56 11.46 44.85 4.04
2473 5803 3.510360 TCTCCTTAGACCAAAAGGTCTCG 59.490 47.826 19.56 12.26 44.85 4.04
2474 5804 5.239351 GTTCTCCTTAGACCAAAAGGTCTC 58.761 45.833 19.56 0.81 44.85 3.36
2475 5805 6.408034 TGGTTCTCCTTAGACCAAAAGGTCT 61.408 44.000 19.84 19.84 43.42 3.85
2476 5806 4.202430 TGGTTCTCCTTAGACCAAAAGGTC 60.202 45.833 6.55 6.55 43.42 3.85
2477 5807 3.720002 TGGTTCTCCTTAGACCAAAAGGT 59.280 43.478 2.04 0.00 43.42 3.50
2478 5808 4.072839 GTGGTTCTCCTTAGACCAAAAGG 58.927 47.826 0.00 0.00 44.17 3.11
2479 5809 4.515567 GTGTGGTTCTCCTTAGACCAAAAG 59.484 45.833 0.00 0.00 35.81 2.27
2480 5810 4.165372 AGTGTGGTTCTCCTTAGACCAAAA 59.835 41.667 0.00 0.00 35.81 2.44
2481 5811 3.714798 AGTGTGGTTCTCCTTAGACCAAA 59.285 43.478 0.00 0.00 35.81 3.28
2482 5812 3.314693 AGTGTGGTTCTCCTTAGACCAA 58.685 45.455 0.00 0.00 35.81 3.67
2483 5813 2.972348 AGTGTGGTTCTCCTTAGACCA 58.028 47.619 0.00 0.00 33.32 4.02
2484 5814 4.322574 GGTTAGTGTGGTTCTCCTTAGACC 60.323 50.000 0.00 0.00 34.23 3.85
2485 5815 4.282703 TGGTTAGTGTGGTTCTCCTTAGAC 59.717 45.833 0.00 0.00 34.23 2.59
2486 5816 4.485875 TGGTTAGTGTGGTTCTCCTTAGA 58.514 43.478 0.00 0.00 34.23 2.10
2487 5817 4.884668 TGGTTAGTGTGGTTCTCCTTAG 57.115 45.455 0.00 0.00 34.23 2.18
2488 5818 4.202388 GGTTGGTTAGTGTGGTTCTCCTTA 60.202 45.833 0.00 0.00 34.23 2.69
2489 5819 3.434596 GGTTGGTTAGTGTGGTTCTCCTT 60.435 47.826 0.00 0.00 34.23 3.36
2490 5820 2.105993 GGTTGGTTAGTGTGGTTCTCCT 59.894 50.000 0.00 0.00 34.23 3.69
2491 5821 2.158726 TGGTTGGTTAGTGTGGTTCTCC 60.159 50.000 0.00 0.00 0.00 3.71
2492 5822 3.139077 CTGGTTGGTTAGTGTGGTTCTC 58.861 50.000 0.00 0.00 0.00 2.87
2493 5823 2.158667 CCTGGTTGGTTAGTGTGGTTCT 60.159 50.000 0.00 0.00 0.00 3.01
2494 5824 2.227194 CCTGGTTGGTTAGTGTGGTTC 58.773 52.381 0.00 0.00 0.00 3.62
2495 5825 1.752788 GCCTGGTTGGTTAGTGTGGTT 60.753 52.381 0.00 0.00 38.35 3.67
2496 5826 0.179001 GCCTGGTTGGTTAGTGTGGT 60.179 55.000 0.00 0.00 38.35 4.16
2497 5827 0.179004 TGCCTGGTTGGTTAGTGTGG 60.179 55.000 0.00 0.00 38.35 4.17
2498 5828 1.336755 GTTGCCTGGTTGGTTAGTGTG 59.663 52.381 0.00 0.00 38.35 3.82
2499 5829 1.687563 GTTGCCTGGTTGGTTAGTGT 58.312 50.000 0.00 0.00 38.35 3.55
2500 5830 0.958822 GGTTGCCTGGTTGGTTAGTG 59.041 55.000 0.00 0.00 38.35 2.74
2501 5831 0.553819 TGGTTGCCTGGTTGGTTAGT 59.446 50.000 0.00 0.00 38.35 2.24
2502 5832 1.923356 ATGGTTGCCTGGTTGGTTAG 58.077 50.000 0.00 0.00 38.35 2.34
2503 5833 3.527507 TTATGGTTGCCTGGTTGGTTA 57.472 42.857 0.00 0.00 38.35 2.85
2504 5834 2.390225 TTATGGTTGCCTGGTTGGTT 57.610 45.000 0.00 0.00 38.35 3.67
2505 5835 2.178580 CATTATGGTTGCCTGGTTGGT 58.821 47.619 0.00 0.00 38.35 3.67
2506 5836 1.134729 GCATTATGGTTGCCTGGTTGG 60.135 52.381 0.00 0.00 33.95 3.77
2507 5837 1.826720 AGCATTATGGTTGCCTGGTTG 59.173 47.619 0.00 0.00 41.06 3.77
2508 5838 2.234414 CAAGCATTATGGTTGCCTGGTT 59.766 45.455 21.49 0.00 46.71 3.67
2509 5839 1.826720 CAAGCATTATGGTTGCCTGGT 59.173 47.619 21.49 0.00 46.71 4.00
2510 5840 2.589798 CAAGCATTATGGTTGCCTGG 57.410 50.000 21.49 1.16 46.71 4.45
2526 5856 3.548818 GCAATGAGGTAAATAGGCGCAAG 60.549 47.826 10.83 0.00 43.44 4.01
2527 5857 2.357637 GCAATGAGGTAAATAGGCGCAA 59.642 45.455 10.83 0.00 0.00 4.85
2528 5858 1.946768 GCAATGAGGTAAATAGGCGCA 59.053 47.619 10.83 0.00 0.00 6.09
2529 5859 1.069906 CGCAATGAGGTAAATAGGCGC 60.070 52.381 0.00 0.00 36.70 6.53
2530 5860 1.531149 CCGCAATGAGGTAAATAGGCG 59.469 52.381 0.00 0.00 42.56 5.52
2531 5861 2.846193 TCCGCAATGAGGTAAATAGGC 58.154 47.619 2.35 0.00 0.00 3.93
2532 5862 3.564225 GGTTCCGCAATGAGGTAAATAGG 59.436 47.826 2.35 0.00 0.00 2.57
2533 5863 4.196193 TGGTTCCGCAATGAGGTAAATAG 58.804 43.478 2.35 0.00 0.00 1.73
2534 5864 4.196193 CTGGTTCCGCAATGAGGTAAATA 58.804 43.478 2.35 0.00 0.00 1.40
2535 5865 3.016736 CTGGTTCCGCAATGAGGTAAAT 58.983 45.455 2.35 0.00 0.00 1.40
2536 5866 2.224670 ACTGGTTCCGCAATGAGGTAAA 60.225 45.455 2.35 0.00 0.00 2.01
2537 5867 1.349688 ACTGGTTCCGCAATGAGGTAA 59.650 47.619 2.35 0.00 0.00 2.85
2538 5868 0.981183 ACTGGTTCCGCAATGAGGTA 59.019 50.000 2.35 0.00 0.00 3.08
2539 5869 0.321653 GACTGGTTCCGCAATGAGGT 60.322 55.000 2.35 0.00 0.00 3.85
2540 5870 1.026718 GGACTGGTTCCGCAATGAGG 61.027 60.000 0.00 0.00 33.46 3.86
2541 5871 2.471255 GGACTGGTTCCGCAATGAG 58.529 57.895 0.00 0.00 33.46 2.90
2542 5872 4.713946 GGACTGGTTCCGCAATGA 57.286 55.556 0.00 0.00 33.46 2.57
2549 5879 9.190317 AGAAATAATGATAAAAGGACTGGTTCC 57.810 33.333 0.00 0.00 46.33 3.62
2552 5882 9.981460 AGAAGAAATAATGATAAAAGGACTGGT 57.019 29.630 0.00 0.00 0.00 4.00
2632 5962 9.402320 ACAAAATTTTATAAGTGTGGGCTTTTT 57.598 25.926 2.44 0.00 0.00 1.94
2633 5963 8.972458 ACAAAATTTTATAAGTGTGGGCTTTT 57.028 26.923 2.44 0.00 0.00 2.27
2634 5964 8.972458 AACAAAATTTTATAAGTGTGGGCTTT 57.028 26.923 2.44 0.00 0.00 3.51
2635 5965 8.207545 TGAACAAAATTTTATAAGTGTGGGCTT 58.792 29.630 2.44 0.00 0.00 4.35
2636 5966 7.731054 TGAACAAAATTTTATAAGTGTGGGCT 58.269 30.769 2.44 0.00 0.00 5.19
2637 5967 7.954788 TGAACAAAATTTTATAAGTGTGGGC 57.045 32.000 2.44 0.00 0.00 5.36
2762 6092 9.853555 TTTAATTGCATCGATGTGAGTATTTTT 57.146 25.926 25.47 9.72 0.00 1.94
2768 6098 9.507280 CTTTAATTTAATTGCATCGATGTGAGT 57.493 29.630 25.47 15.79 0.00 3.41
2769 6099 9.507280 ACTTTAATTTAATTGCATCGATGTGAG 57.493 29.630 25.47 1.47 0.00 3.51
2770 6100 9.853555 AACTTTAATTTAATTGCATCGATGTGA 57.146 25.926 25.47 15.06 0.00 3.58
2772 6102 9.853555 TGAACTTTAATTTAATTGCATCGATGT 57.146 25.926 25.47 9.23 0.00 3.06
2791 6121 8.912988 TGTCCAGAACTTTTATTCATGAACTTT 58.087 29.630 11.07 0.00 0.00 2.66
2792 6122 8.463930 TGTCCAGAACTTTTATTCATGAACTT 57.536 30.769 11.07 0.00 0.00 2.66
2793 6123 8.641498 ATGTCCAGAACTTTTATTCATGAACT 57.359 30.769 11.07 3.09 0.00 3.01
2794 6124 8.734386 AGATGTCCAGAACTTTTATTCATGAAC 58.266 33.333 11.07 0.00 0.00 3.18
2795 6125 8.868522 AGATGTCCAGAACTTTTATTCATGAA 57.131 30.769 11.26 11.26 0.00 2.57
2845 6175 2.159382 ACCGGTCGCTGATTGATTTTT 58.841 42.857 0.00 0.00 0.00 1.94
2846 6176 1.821216 ACCGGTCGCTGATTGATTTT 58.179 45.000 0.00 0.00 0.00 1.82
2847 6177 1.821216 AACCGGTCGCTGATTGATTT 58.179 45.000 8.04 0.00 0.00 2.17
2848 6178 1.821216 AAACCGGTCGCTGATTGATT 58.179 45.000 8.04 0.00 0.00 2.57
2849 6179 2.684001 TAAACCGGTCGCTGATTGAT 57.316 45.000 8.04 0.00 0.00 2.57
2850 6180 2.675844 CAATAAACCGGTCGCTGATTGA 59.324 45.455 8.04 0.00 0.00 2.57
2851 6181 2.418628 ACAATAAACCGGTCGCTGATTG 59.581 45.455 8.04 10.51 0.00 2.67
2852 6182 2.706890 ACAATAAACCGGTCGCTGATT 58.293 42.857 8.04 0.00 0.00 2.57
2853 6183 2.396590 ACAATAAACCGGTCGCTGAT 57.603 45.000 8.04 0.00 0.00 2.90
2854 6184 2.172851 AACAATAAACCGGTCGCTGA 57.827 45.000 8.04 0.00 0.00 4.26
2855 6185 2.031508 ACAAACAATAAACCGGTCGCTG 60.032 45.455 8.04 5.94 0.00 5.18
2856 6186 2.223745 ACAAACAATAAACCGGTCGCT 58.776 42.857 8.04 0.00 0.00 4.93
2857 6187 2.691984 ACAAACAATAAACCGGTCGC 57.308 45.000 8.04 0.00 0.00 5.19
2858 6188 5.952698 AAAAACAAACAATAAACCGGTCG 57.047 34.783 8.04 0.00 0.00 4.79
2877 6207 9.487790 ACAACAAGAATGAGAAAGAAACAAAAA 57.512 25.926 0.00 0.00 0.00 1.94
2878 6208 9.487790 AACAACAAGAATGAGAAAGAAACAAAA 57.512 25.926 0.00 0.00 0.00 2.44
2879 6209 9.487790 AAACAACAAGAATGAGAAAGAAACAAA 57.512 25.926 0.00 0.00 0.00 2.83
2880 6210 9.487790 AAAACAACAAGAATGAGAAAGAAACAA 57.512 25.926 0.00 0.00 0.00 2.83
2881 6211 9.487790 AAAAACAACAAGAATGAGAAAGAAACA 57.512 25.926 0.00 0.00 0.00 2.83
2882 6212 9.958285 GAAAAACAACAAGAATGAGAAAGAAAC 57.042 29.630 0.00 0.00 0.00 2.78
2883 6213 8.859156 CGAAAAACAACAAGAATGAGAAAGAAA 58.141 29.630 0.00 0.00 0.00 2.52
2884 6214 7.487829 CCGAAAAACAACAAGAATGAGAAAGAA 59.512 33.333 0.00 0.00 0.00 2.52
2885 6215 6.972328 CCGAAAAACAACAAGAATGAGAAAGA 59.028 34.615 0.00 0.00 0.00 2.52
2886 6216 6.751888 ACCGAAAAACAACAAGAATGAGAAAG 59.248 34.615 0.00 0.00 0.00 2.62
2887 6217 6.626302 ACCGAAAAACAACAAGAATGAGAAA 58.374 32.000 0.00 0.00 0.00 2.52
2888 6218 6.202516 ACCGAAAAACAACAAGAATGAGAA 57.797 33.333 0.00 0.00 0.00 2.87
2889 6219 5.828299 ACCGAAAAACAACAAGAATGAGA 57.172 34.783 0.00 0.00 0.00 3.27
2890 6220 6.885735 AAACCGAAAAACAACAAGAATGAG 57.114 33.333 0.00 0.00 0.00 2.90
2891 6221 7.659652 AAAAACCGAAAAACAACAAGAATGA 57.340 28.000 0.00 0.00 0.00 2.57
2953 6283 9.447157 CATGTTGGTAAAATTTGGGTTCATTAT 57.553 29.630 0.00 0.00 0.00 1.28
2954 6284 8.432805 ACATGTTGGTAAAATTTGGGTTCATTA 58.567 29.630 0.00 0.00 0.00 1.90
2955 6285 7.286313 ACATGTTGGTAAAATTTGGGTTCATT 58.714 30.769 0.00 0.00 0.00 2.57
2956 6286 6.836242 ACATGTTGGTAAAATTTGGGTTCAT 58.164 32.000 0.00 0.00 0.00 2.57
2957 6287 6.240549 ACATGTTGGTAAAATTTGGGTTCA 57.759 33.333 0.00 0.00 0.00 3.18
2958 6288 7.386573 CCTTACATGTTGGTAAAATTTGGGTTC 59.613 37.037 2.30 0.00 33.18 3.62
2959 6289 7.220740 CCTTACATGTTGGTAAAATTTGGGTT 58.779 34.615 2.30 0.00 33.18 4.11
2960 6290 6.742926 GCCTTACATGTTGGTAAAATTTGGGT 60.743 38.462 2.30 0.00 33.18 4.51
2961 6291 5.641636 GCCTTACATGTTGGTAAAATTTGGG 59.358 40.000 2.30 0.00 33.18 4.12
2962 6292 6.226787 TGCCTTACATGTTGGTAAAATTTGG 58.773 36.000 2.30 0.00 33.18 3.28
2963 6293 6.128580 GCTGCCTTACATGTTGGTAAAATTTG 60.129 38.462 2.30 0.00 33.18 2.32
2964 6294 5.931724 GCTGCCTTACATGTTGGTAAAATTT 59.068 36.000 2.30 0.00 33.18 1.82
2965 6295 5.245977 AGCTGCCTTACATGTTGGTAAAATT 59.754 36.000 2.30 0.00 33.18 1.82
2966 6296 4.772100 AGCTGCCTTACATGTTGGTAAAAT 59.228 37.500 2.30 0.00 33.18 1.82
2967 6297 4.148838 AGCTGCCTTACATGTTGGTAAAA 58.851 39.130 2.30 0.00 33.18 1.52
2968 6298 3.756434 GAGCTGCCTTACATGTTGGTAAA 59.244 43.478 2.30 0.00 33.18 2.01
2969 6299 3.244735 TGAGCTGCCTTACATGTTGGTAA 60.245 43.478 2.30 0.00 0.00 2.85
2970 6300 2.304470 TGAGCTGCCTTACATGTTGGTA 59.696 45.455 2.30 5.93 0.00 3.25
2971 6301 1.073763 TGAGCTGCCTTACATGTTGGT 59.926 47.619 2.30 0.00 0.00 3.67
2972 6302 1.825090 TGAGCTGCCTTACATGTTGG 58.175 50.000 2.30 8.48 0.00 3.77
2973 6303 2.163010 CCTTGAGCTGCCTTACATGTTG 59.837 50.000 2.30 0.00 0.00 3.33
2974 6304 2.440409 CCTTGAGCTGCCTTACATGTT 58.560 47.619 2.30 0.00 0.00 2.71
2975 6305 1.952367 GCCTTGAGCTGCCTTACATGT 60.952 52.381 2.69 2.69 38.99 3.21
2976 6306 0.737219 GCCTTGAGCTGCCTTACATG 59.263 55.000 0.00 0.00 38.99 3.21
2977 6307 0.329261 TGCCTTGAGCTGCCTTACAT 59.671 50.000 0.00 0.00 44.23 2.29
2978 6308 0.321919 CTGCCTTGAGCTGCCTTACA 60.322 55.000 0.00 0.00 44.23 2.41
2979 6309 1.028868 CCTGCCTTGAGCTGCCTTAC 61.029 60.000 0.00 0.00 44.23 2.34
2980 6310 1.300963 CCTGCCTTGAGCTGCCTTA 59.699 57.895 0.00 0.00 44.23 2.69
2981 6311 2.035312 CCTGCCTTGAGCTGCCTT 59.965 61.111 0.00 0.00 44.23 4.35


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.