Multiple sequence alignment - TraesCS4A01G474600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G474600 chr4A 100.000 4612 0 0 1 4612 733758936 733763547 0.000000e+00 8517.0
1 TraesCS4A01G474600 chr4A 93.708 890 46 3 2534 3420 733671531 733670649 0.000000e+00 1325.0
2 TraesCS4A01G474600 chr4A 92.534 817 43 5 945 1751 733672336 733671528 0.000000e+00 1155.0
3 TraesCS4A01G474600 chr4A 95.252 674 22 3 1 664 697313762 697313089 0.000000e+00 1059.0
4 TraesCS4A01G474600 chr4A 82.847 822 85 27 945 1749 733741225 733742007 0.000000e+00 686.0
5 TraesCS4A01G474600 chr4A 80.971 762 123 14 2539 3292 733639697 733638950 6.650000e-163 584.0
6 TraesCS4A01G474600 chr4A 79.828 813 105 23 956 1749 733640473 733639701 5.250000e-149 538.0
7 TraesCS4A01G474600 chr4A 96.037 328 11 2 1761 2087 692397257 692397583 2.440000e-147 532.0
8 TraesCS4A01G474600 chr4A 93.994 333 12 6 4178 4505 733669692 733669363 8.910000e-137 497.0
9 TraesCS4A01G474600 chr4A 84.708 497 54 13 3434 3920 733638802 733638318 1.160000e-130 477.0
10 TraesCS4A01G474600 chr4A 97.009 234 4 2 2303 2533 692397859 692398092 1.560000e-104 390.0
11 TraesCS4A01G474600 chr4A 93.061 245 16 1 385 628 621431291 621431047 1.580000e-94 357.0
12 TraesCS4A01G474600 chr4A 92.202 218 16 1 3703 3920 733670372 733670156 1.610000e-79 307.0
13 TraesCS4A01G474600 chr4A 90.000 190 10 5 3423 3612 733670605 733670425 2.140000e-58 237.0
14 TraesCS4A01G474600 chr4A 88.696 115 4 4 3933 4045 733669854 733669747 1.040000e-26 132.0
15 TraesCS4A01G474600 chr4A 81.452 124 14 5 3295 3417 733742813 733742928 4.910000e-15 93.5
16 TraesCS4A01G474600 chr4A 96.970 33 1 0 3383 3415 733638888 733638856 6.450000e-04 56.5
17 TraesCS4A01G474600 chr7D 92.203 885 54 6 2534 3415 6491675 6492547 0.000000e+00 1238.0
18 TraesCS4A01G474600 chr7D 89.964 827 56 12 942 1751 6490862 6491678 0.000000e+00 1042.0
19 TraesCS4A01G474600 chr7D 83.271 807 88 27 956 1751 6582111 6582881 0.000000e+00 699.0
20 TraesCS4A01G474600 chr7D 90.101 495 32 10 3434 3917 6492601 6493089 1.090000e-175 627.0
21 TraesCS4A01G474600 chr7D 79.841 754 130 16 2534 3285 6582878 6583611 8.790000e-147 531.0
22 TraesCS4A01G474600 chr7D 85.653 467 54 8 3433 3892 6583766 6584226 3.230000e-131 479.0
23 TraesCS4A01G474600 chr7D 81.488 605 58 28 1011 1599 6465183 6464617 9.100000e-122 448.0
24 TraesCS4A01G474600 chr7D 90.909 330 23 5 4175 4502 6493573 6493897 1.970000e-118 436.0
25 TraesCS4A01G474600 chr7D 100.000 52 0 0 3975 4026 6493456 6493507 3.800000e-16 97.1
26 TraesCS4A01G474600 chr7D 85.294 68 6 3 3348 3415 6584659 6584722 2.980000e-07 67.6
27 TraesCS4A01G474600 chr7A 91.761 886 50 9 2534 3415 7629468 7630334 0.000000e+00 1210.0
28 TraesCS4A01G474600 chr7A 89.242 818 62 10 942 1751 7628672 7629471 0.000000e+00 1000.0
29 TraesCS4A01G474600 chr7A 83.292 808 86 24 956 1751 7634049 7634819 0.000000e+00 699.0
30 TraesCS4A01G474600 chr7A 92.229 489 27 8 3434 3917 7630388 7630870 0.000000e+00 682.0
31 TraesCS4A01G474600 chr7A 80.000 765 127 15 2534 3292 7669980 7670724 4.060000e-150 542.0
32 TraesCS4A01G474600 chr7A 79.501 761 133 17 2534 3292 7634816 7635555 1.900000e-143 520.0
33 TraesCS4A01G474600 chr7A 86.510 467 49 10 3433 3892 7635705 7636164 6.890000e-138 501.0
34 TraesCS4A01G474600 chr7A 85.455 495 50 14 3434 3917 7670873 7671356 3.210000e-136 496.0
35 TraesCS4A01G474600 chr7A 92.145 331 22 2 4175 4505 7631413 7631739 9.040000e-127 464.0
36 TraesCS4A01G474600 chr7A 83.879 397 55 5 1358 1751 7669593 7669983 2.030000e-98 370.0
37 TraesCS4A01G474600 chr7A 79.641 334 36 12 956 1284 7669196 7669502 1.300000e-50 211.0
38 TraesCS4A01G474600 chr7A 91.803 122 8 1 3928 4047 7631240 7631361 7.940000e-38 169.0
39 TraesCS4A01G474600 chr7A 78.333 120 17 7 1369 1486 673126652 673126764 8.280000e-08 69.4
40 TraesCS4A01G474600 chr7A 85.294 68 6 3 3348 3415 7636596 7636659 2.980000e-07 67.6
41 TraesCS4A01G474600 chr5B 94.722 701 33 2 1 701 697707187 697707883 0.000000e+00 1086.0
42 TraesCS4A01G474600 chr5B 95.359 668 25 3 1 664 705599028 705598363 0.000000e+00 1057.0
43 TraesCS4A01G474600 chr5B 95.166 662 27 3 2 661 11299204 11299862 0.000000e+00 1040.0
44 TraesCS4A01G474600 chr5B 95.045 666 26 2 1 664 690670522 690671182 0.000000e+00 1040.0
45 TraesCS4A01G474600 chr5B 95.192 312 11 1 1761 2068 125277563 125277252 1.490000e-134 490.0
46 TraesCS4A01G474600 chr5B 94.444 252 7 6 2291 2535 125276589 125276338 9.360000e-102 381.0
47 TraesCS4A01G474600 chr5B 92.276 246 16 3 385 628 6693911 6694155 3.420000e-91 346.0
48 TraesCS4A01G474600 chr5B 92.000 250 12 6 385 628 712212790 712213037 1.230000e-90 344.0
49 TraesCS4A01G474600 chr5B 87.037 324 15 5 385 705 610066503 610066802 1.590000e-89 340.0
50 TraesCS4A01G474600 chr5B 90.204 245 21 3 386 628 591755670 591755913 2.680000e-82 316.0
51 TraesCS4A01G474600 chr5B 94.915 118 4 2 4072 4189 603798256 603798371 2.830000e-42 183.0
52 TraesCS4A01G474600 chr6B 95.626 663 25 2 1 661 3965458 3966118 0.000000e+00 1061.0
53 TraesCS4A01G474600 chr6B 94.895 666 31 3 1 664 14535521 14536185 0.000000e+00 1038.0
54 TraesCS4A01G474600 chr6B 92.653 245 15 3 385 628 9869616 9869374 2.640000e-92 350.0
55 TraesCS4A01G474600 chr2B 95.052 667 30 3 1 664 454335155 454335821 0.000000e+00 1046.0
56 TraesCS4A01G474600 chr2B 94.798 346 17 1 1761 2106 661848867 661848523 5.250000e-149 538.0
57 TraesCS4A01G474600 chr2B 95.779 308 12 1 1761 2068 391493444 391493750 3.210000e-136 496.0
58 TraesCS4A01G474600 chr2B 97.009 234 4 2 2303 2533 391494284 391494517 1.560000e-104 390.0
59 TraesCS4A01G474600 chr2B 93.416 243 11 4 2295 2534 661847670 661847430 5.680000e-94 355.0
60 TraesCS4A01G474600 chr2B 91.525 59 4 1 2169 2226 391493798 391493856 3.830000e-11 80.5
61 TraesCS4A01G474600 chr3B 95.188 665 25 4 1 664 545403434 545402776 0.000000e+00 1044.0
62 TraesCS4A01G474600 chr3B 94.915 118 6 0 4061 4178 554097633 554097750 7.880000e-43 185.0
63 TraesCS4A01G474600 chr3B 94.915 118 5 1 4071 4187 217773167 217773284 2.830000e-42 183.0
64 TraesCS4A01G474600 chrUn 95.431 591 20 3 1761 2345 298904279 298903690 0.000000e+00 935.0
65 TraesCS4A01G474600 chrUn 95.431 591 20 3 1761 2345 323544893 323545482 0.000000e+00 935.0
66 TraesCS4A01G474600 chrUn 89.841 502 19 13 1761 2262 350941576 350941107 2.360000e-172 616.0
67 TraesCS4A01G474600 chrUn 97.034 236 4 2 2303 2535 384259386 384259621 1.200000e-105 394.0
68 TraesCS4A01G474600 chrUn 97.034 236 4 2 2303 2535 474243092 474242857 1.200000e-105 394.0
69 TraesCS4A01G474600 chrUn 97.009 234 4 2 2303 2533 326246737 326246970 1.560000e-104 390.0
70 TraesCS4A01G474600 chrUn 89.394 198 17 3 425 619 191167842 191167646 3.560000e-61 246.0
71 TraesCS4A01G474600 chrUn 89.394 198 17 3 425 619 354299130 354299326 3.560000e-61 246.0
72 TraesCS4A01G474600 chrUn 83.643 269 18 10 438 704 359894665 359894909 3.590000e-56 230.0
73 TraesCS4A01G474600 chrUn 96.610 59 2 0 645 703 48777989 48777931 1.060000e-16 99.0
74 TraesCS4A01G474600 chr7B 92.777 623 30 4 1 620 682261052 682260442 0.000000e+00 887.0
75 TraesCS4A01G474600 chr7B 86.145 498 49 17 1761 2255 613243426 613243906 1.900000e-143 520.0
76 TraesCS4A01G474600 chr5A 85.915 781 81 24 1761 2530 547000393 546999631 0.000000e+00 821.0
77 TraesCS4A01G474600 chr5A 86.916 107 10 4 2121 2226 547001261 547001158 2.920000e-22 117.0
78 TraesCS4A01G474600 chr5A 97.959 49 1 0 2199 2247 547001153 547001105 8.220000e-13 86.1
79 TraesCS4A01G474600 chr5A 89.831 59 5 1 2169 2226 547000039 546999981 1.780000e-09 75.0
80 TraesCS4A01G474600 chr4B 88.344 326 11 6 385 707 271038339 271038038 2.620000e-97 366.0
81 TraesCS4A01G474600 chr4B 97.321 112 3 0 4069 4180 24769198 24769309 1.690000e-44 191.0
82 TraesCS4A01G474600 chr4B 98.148 108 2 0 4072 4179 650659912 650660019 6.090000e-44 189.0
83 TraesCS4A01G474600 chr2D 90.226 266 22 3 2272 2534 43362535 43362799 1.230000e-90 344.0
84 TraesCS4A01G474600 chr2D 86.503 163 21 1 1126 1287 440617045 440616883 1.320000e-40 178.0
85 TraesCS4A01G474600 chr1B 91.020 245 20 2 385 628 637302605 637302848 3.440000e-86 329.0
86 TraesCS4A01G474600 chr1B 85.714 126 14 2 500 622 651914684 651914560 3.740000e-26 130.0
87 TraesCS4A01G474600 chr1D 89.412 255 26 1 2278 2532 203574764 203575017 2.070000e-83 320.0
88 TraesCS4A01G474600 chr3A 95.041 121 5 1 4072 4191 576567269 576567389 6.090000e-44 189.0
89 TraesCS4A01G474600 chr3A 93.388 121 8 0 4065 4185 673617344 673617464 3.670000e-41 180.0
90 TraesCS4A01G474600 chr4D 95.614 114 5 0 4071 4184 483110244 483110131 2.830000e-42 183.0
91 TraesCS4A01G474600 chr3D 94.872 117 6 0 4069 4185 435646852 435646736 2.830000e-42 183.0
92 TraesCS4A01G474600 chr2A 97.917 48 1 0 1144 1191 752551786 752551833 2.960000e-12 84.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G474600 chr4A 733758936 733763547 4611 False 8517.000000 8517 100.000000 1 4612 1 chr4A.!!$F1 4611
1 TraesCS4A01G474600 chr4A 697313089 697313762 673 True 1059.000000 1059 95.252000 1 664 1 chr4A.!!$R2 663
2 TraesCS4A01G474600 chr4A 733669363 733672336 2973 True 608.833333 1325 91.855667 945 4505 6 chr4A.!!$R4 3560
3 TraesCS4A01G474600 chr4A 692397257 692398092 835 False 461.000000 532 96.523000 1761 2533 2 chr4A.!!$F2 772
4 TraesCS4A01G474600 chr4A 733638318 733640473 2155 True 413.875000 584 85.619250 956 3920 4 chr4A.!!$R3 2964
5 TraesCS4A01G474600 chr4A 733741225 733742928 1703 False 389.750000 686 82.149500 945 3417 2 chr4A.!!$F3 2472
6 TraesCS4A01G474600 chr7D 6490862 6493897 3035 False 688.020000 1238 92.635400 942 4502 5 chr7D.!!$F1 3560
7 TraesCS4A01G474600 chr7D 6464617 6465183 566 True 448.000000 448 81.488000 1011 1599 1 chr7D.!!$R1 588
8 TraesCS4A01G474600 chr7D 6582111 6584722 2611 False 444.150000 699 83.514750 956 3892 4 chr7D.!!$F2 2936
9 TraesCS4A01G474600 chr7A 7628672 7636659 7987 False 590.288889 1210 87.975222 942 4505 9 chr7A.!!$F2 3563
10 TraesCS4A01G474600 chr7A 7669196 7671356 2160 False 404.750000 542 82.243750 956 3917 4 chr7A.!!$F3 2961
11 TraesCS4A01G474600 chr5B 697707187 697707883 696 False 1086.000000 1086 94.722000 1 701 1 chr5B.!!$F7 700
12 TraesCS4A01G474600 chr5B 705598363 705599028 665 True 1057.000000 1057 95.359000 1 664 1 chr5B.!!$R1 663
13 TraesCS4A01G474600 chr5B 11299204 11299862 658 False 1040.000000 1040 95.166000 2 661 1 chr5B.!!$F2 659
14 TraesCS4A01G474600 chr5B 690670522 690671182 660 False 1040.000000 1040 95.045000 1 664 1 chr5B.!!$F6 663
15 TraesCS4A01G474600 chr5B 125276338 125277563 1225 True 435.500000 490 94.818000 1761 2535 2 chr5B.!!$R2 774
16 TraesCS4A01G474600 chr6B 3965458 3966118 660 False 1061.000000 1061 95.626000 1 661 1 chr6B.!!$F1 660
17 TraesCS4A01G474600 chr6B 14535521 14536185 664 False 1038.000000 1038 94.895000 1 664 1 chr6B.!!$F2 663
18 TraesCS4A01G474600 chr2B 454335155 454335821 666 False 1046.000000 1046 95.052000 1 664 1 chr2B.!!$F1 663
19 TraesCS4A01G474600 chr2B 661847430 661848867 1437 True 446.500000 538 94.107000 1761 2534 2 chr2B.!!$R1 773
20 TraesCS4A01G474600 chr2B 391493444 391494517 1073 False 322.166667 496 94.771000 1761 2533 3 chr2B.!!$F2 772
21 TraesCS4A01G474600 chr3B 545402776 545403434 658 True 1044.000000 1044 95.188000 1 664 1 chr3B.!!$R1 663
22 TraesCS4A01G474600 chrUn 298903690 298904279 589 True 935.000000 935 95.431000 1761 2345 1 chrUn.!!$R3 584
23 TraesCS4A01G474600 chrUn 323544893 323545482 589 False 935.000000 935 95.431000 1761 2345 1 chrUn.!!$F1 584
24 TraesCS4A01G474600 chr7B 682260442 682261052 610 True 887.000000 887 92.777000 1 620 1 chr7B.!!$R1 619
25 TraesCS4A01G474600 chr5A 546999631 547001261 1630 True 274.775000 821 90.155250 1761 2530 4 chr5A.!!$R1 769

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
943 976 0.107703 TCATGAAGGCCGTCCACATC 60.108 55.0 16.54 0.0 32.33 3.06 F
1347 1436 0.037975 TTCTTGGGTCCGTTCGTAGC 60.038 55.0 0.00 0.0 0.00 3.58 F
1747 1854 0.370273 GTCGTGTGCAATCCGATGAC 59.630 55.0 6.85 0.0 32.68 3.06 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2576 3515 0.181350 ATTCAGGGCCTTCATCGTCC 59.819 55.0 1.32 0.00 0.0 4.79 R
3273 4222 0.883833 CGAGCCAAATCCACAAAGCT 59.116 50.0 0.00 0.00 0.0 3.74 R
3614 4678 0.533531 TTCAGCATAGATGGCCAGCG 60.534 55.0 16.75 2.14 0.0 5.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
33 36 5.365025 TGCTATTTTACCTGAGAGAGAGCAT 59.635 40.000 0.00 0.00 31.64 3.79
115 124 6.755206 TCGTTCTGAACTTAATCTCCAAGAA 58.245 36.000 17.60 0.00 0.00 2.52
146 155 8.341892 TGCTTTTGTGGTGTTATATATGAACA 57.658 30.769 0.00 1.90 34.46 3.18
213 222 6.058833 TGCTTCTGGTACAAGTGAATGTTTA 58.941 36.000 0.00 0.00 38.70 2.01
673 706 0.320073 CTAAAGGCCGTCACGAACCA 60.320 55.000 11.29 0.00 0.00 3.67
715 748 2.287668 ACTAGTGCTCCAATATCGACGC 60.288 50.000 0.00 0.00 0.00 5.19
716 749 0.249489 AGTGCTCCAATATCGACGCC 60.249 55.000 0.00 0.00 0.00 5.68
717 750 0.249489 GTGCTCCAATATCGACGCCT 60.249 55.000 0.00 0.00 0.00 5.52
718 751 1.000607 GTGCTCCAATATCGACGCCTA 60.001 52.381 0.00 0.00 0.00 3.93
719 752 1.269723 TGCTCCAATATCGACGCCTAG 59.730 52.381 0.00 0.00 0.00 3.02
720 753 1.269998 GCTCCAATATCGACGCCTAGT 59.730 52.381 0.00 0.00 0.00 2.57
721 754 2.922758 GCTCCAATATCGACGCCTAGTG 60.923 54.545 0.00 0.00 0.00 2.74
722 755 1.611977 TCCAATATCGACGCCTAGTGG 59.388 52.381 13.99 13.99 35.05 4.00
724 757 2.223971 CCAATATCGACGCCTAGTGGTT 60.224 50.000 12.67 0.00 35.27 3.67
725 758 3.050619 CAATATCGACGCCTAGTGGTTC 58.949 50.000 0.00 0.00 35.27 3.62
727 760 1.673808 ATCGACGCCTAGTGGTTCCC 61.674 60.000 0.00 0.00 35.27 3.97
729 762 1.905512 GACGCCTAGTGGTTCCCAT 59.094 57.895 0.00 0.00 35.28 4.00
730 763 0.179081 GACGCCTAGTGGTTCCCATC 60.179 60.000 0.00 0.00 35.28 3.51
732 765 0.469917 CGCCTAGTGGTTCCCATCAT 59.530 55.000 0.00 0.00 35.28 2.45
733 766 1.541233 CGCCTAGTGGTTCCCATCATC 60.541 57.143 0.00 0.00 35.28 2.92
734 767 1.202818 GCCTAGTGGTTCCCATCATCC 60.203 57.143 0.00 0.00 35.28 3.51
735 768 2.126882 CCTAGTGGTTCCCATCATCCA 58.873 52.381 0.00 0.00 35.28 3.41
736 769 2.713167 CCTAGTGGTTCCCATCATCCAT 59.287 50.000 0.00 0.00 35.28 3.41
737 770 3.909995 CCTAGTGGTTCCCATCATCCATA 59.090 47.826 0.00 0.00 35.28 2.74
738 771 4.350816 CCTAGTGGTTCCCATCATCCATAA 59.649 45.833 0.00 0.00 35.28 1.90
739 772 4.170468 AGTGGTTCCCATCATCCATAAC 57.830 45.455 0.00 0.00 35.28 1.89
740 773 3.527253 AGTGGTTCCCATCATCCATAACA 59.473 43.478 0.00 0.00 35.28 2.41
741 774 4.017591 AGTGGTTCCCATCATCCATAACAA 60.018 41.667 0.00 0.00 35.28 2.83
742 775 4.097892 GTGGTTCCCATCATCCATAACAAC 59.902 45.833 0.00 0.00 35.28 3.32
744 777 4.895297 GGTTCCCATCATCCATAACAACAT 59.105 41.667 0.00 0.00 0.00 2.71
745 778 5.363580 GGTTCCCATCATCCATAACAACATT 59.636 40.000 0.00 0.00 0.00 2.71
746 779 6.549364 GGTTCCCATCATCCATAACAACATTA 59.451 38.462 0.00 0.00 0.00 1.90
748 781 8.641541 GTTCCCATCATCCATAACAACATTAAT 58.358 33.333 0.00 0.00 0.00 1.40
750 783 8.859090 TCCCATCATCCATAACAACATTAATTC 58.141 33.333 0.00 0.00 0.00 2.17
751 784 7.809331 CCCATCATCCATAACAACATTAATTCG 59.191 37.037 0.00 0.00 0.00 3.34
752 785 7.809331 CCATCATCCATAACAACATTAATTCGG 59.191 37.037 0.00 0.00 0.00 4.30
753 786 6.734137 TCATCCATAACAACATTAATTCGGC 58.266 36.000 0.00 0.00 0.00 5.54
754 787 5.163302 TCCATAACAACATTAATTCGGCG 57.837 39.130 0.00 0.00 0.00 6.46
755 788 4.876679 TCCATAACAACATTAATTCGGCGA 59.123 37.500 4.99 4.99 0.00 5.54
758 791 4.759516 AACAACATTAATTCGGCGAACT 57.240 36.364 26.22 17.75 0.00 3.01
759 792 4.759516 ACAACATTAATTCGGCGAACTT 57.240 36.364 26.22 20.45 0.00 2.66
760 793 5.116069 ACAACATTAATTCGGCGAACTTT 57.884 34.783 26.22 18.38 0.00 2.66
761 794 5.151389 ACAACATTAATTCGGCGAACTTTC 58.849 37.500 26.22 0.00 0.00 2.62
762 795 5.150683 CAACATTAATTCGGCGAACTTTCA 58.849 37.500 26.22 8.39 0.00 2.69
764 797 5.949735 ACATTAATTCGGCGAACTTTCATT 58.050 33.333 26.22 16.15 0.00 2.57
765 798 6.027749 ACATTAATTCGGCGAACTTTCATTC 58.972 36.000 26.22 0.00 0.00 2.67
776 809 4.594136 GAACTTTCATTCGTTCGGTTTGT 58.406 39.130 0.00 0.00 31.38 2.83
778 811 4.347813 ACTTTCATTCGTTCGGTTTGTTG 58.652 39.130 0.00 0.00 0.00 3.33
779 812 2.392933 TCATTCGTTCGGTTTGTTGC 57.607 45.000 0.00 0.00 0.00 4.17
780 813 1.671328 TCATTCGTTCGGTTTGTTGCA 59.329 42.857 0.00 0.00 0.00 4.08
781 814 2.292016 TCATTCGTTCGGTTTGTTGCAT 59.708 40.909 0.00 0.00 0.00 3.96
782 815 2.853731 TTCGTTCGGTTTGTTGCATT 57.146 40.000 0.00 0.00 0.00 3.56
785 818 2.097629 TCGTTCGGTTTGTTGCATTCAA 59.902 40.909 0.00 0.00 0.00 2.69
786 819 3.049206 CGTTCGGTTTGTTGCATTCAAT 58.951 40.909 5.83 0.00 34.29 2.57
788 821 3.023946 TCGGTTTGTTGCATTCAATGG 57.976 42.857 0.00 0.72 34.29 3.16
789 822 2.363680 TCGGTTTGTTGCATTCAATGGT 59.636 40.909 0.00 0.00 34.29 3.55
790 823 2.475864 CGGTTTGTTGCATTCAATGGTG 59.524 45.455 0.00 0.00 34.29 4.17
791 824 2.807392 GGTTTGTTGCATTCAATGGTGG 59.193 45.455 0.00 0.00 34.29 4.61
793 826 4.317488 GTTTGTTGCATTCAATGGTGGAT 58.683 39.130 0.00 0.00 34.29 3.41
794 827 4.620589 TTGTTGCATTCAATGGTGGATT 57.379 36.364 0.00 0.00 34.29 3.01
798 831 4.620589 TGCATTCAATGGTGGATTTGTT 57.379 36.364 0.00 0.00 0.00 2.83
799 832 4.316645 TGCATTCAATGGTGGATTTGTTG 58.683 39.130 0.00 0.00 0.00 3.33
800 833 4.040095 TGCATTCAATGGTGGATTTGTTGA 59.960 37.500 0.00 0.00 0.00 3.18
801 834 4.996122 GCATTCAATGGTGGATTTGTTGAA 59.004 37.500 0.00 0.00 41.37 2.69
802 835 5.106987 GCATTCAATGGTGGATTTGTTGAAC 60.107 40.000 0.00 0.00 40.36 3.18
803 836 5.867903 TTCAATGGTGGATTTGTTGAACT 57.132 34.783 0.00 0.00 34.82 3.01
804 837 5.199024 TCAATGGTGGATTTGTTGAACTG 57.801 39.130 0.00 0.00 0.00 3.16
805 838 4.648762 TCAATGGTGGATTTGTTGAACTGT 59.351 37.500 0.00 0.00 0.00 3.55
806 839 5.128499 TCAATGGTGGATTTGTTGAACTGTT 59.872 36.000 0.00 0.00 0.00 3.16
807 840 5.612725 ATGGTGGATTTGTTGAACTGTTT 57.387 34.783 0.00 0.00 0.00 2.83
808 841 4.753233 TGGTGGATTTGTTGAACTGTTTG 58.247 39.130 0.00 0.00 0.00 2.93
809 842 4.221703 TGGTGGATTTGTTGAACTGTTTGT 59.778 37.500 0.00 0.00 0.00 2.83
810 843 4.803613 GGTGGATTTGTTGAACTGTTTGTC 59.196 41.667 0.00 0.00 0.00 3.18
812 845 6.042143 GTGGATTTGTTGAACTGTTTGTCAT 58.958 36.000 0.00 0.00 0.00 3.06
814 847 5.050837 GGATTTGTTGAACTGTTTGTCATGC 60.051 40.000 0.00 0.00 0.00 4.06
815 848 4.446994 TTGTTGAACTGTTTGTCATGCA 57.553 36.364 0.00 0.00 0.00 3.96
816 849 4.446994 TGTTGAACTGTTTGTCATGCAA 57.553 36.364 0.00 0.00 34.87 4.08
817 850 4.814147 TGTTGAACTGTTTGTCATGCAAA 58.186 34.783 10.11 10.11 44.05 3.68
829 862 6.746104 TTGTCATGCAAAACTTATCGTTTG 57.254 33.333 0.00 0.00 44.77 2.93
830 863 5.218885 TGTCATGCAAAACTTATCGTTTGG 58.781 37.500 0.00 0.00 44.77 3.28
845 878 4.703899 CGTTTGGCACGTTATATCTACC 57.296 45.455 0.00 0.00 44.49 3.18
846 879 4.114073 CGTTTGGCACGTTATATCTACCA 58.886 43.478 0.00 0.00 44.49 3.25
847 880 4.748102 CGTTTGGCACGTTATATCTACCAT 59.252 41.667 0.00 0.00 44.49 3.55
848 881 5.235616 CGTTTGGCACGTTATATCTACCATT 59.764 40.000 0.00 0.00 44.49 3.16
849 882 6.427150 GTTTGGCACGTTATATCTACCATTG 58.573 40.000 0.00 0.00 0.00 2.82
850 883 5.538849 TGGCACGTTATATCTACCATTGA 57.461 39.130 0.00 0.00 0.00 2.57
851 884 6.109156 TGGCACGTTATATCTACCATTGAT 57.891 37.500 0.00 0.00 0.00 2.57
852 885 6.530120 TGGCACGTTATATCTACCATTGATT 58.470 36.000 0.00 0.00 0.00 2.57
853 886 6.995686 TGGCACGTTATATCTACCATTGATTT 59.004 34.615 0.00 0.00 0.00 2.17
854 887 7.041440 TGGCACGTTATATCTACCATTGATTTG 60.041 37.037 0.00 0.00 0.00 2.32
855 888 7.041372 GGCACGTTATATCTACCATTGATTTGT 60.041 37.037 0.00 0.00 0.00 2.83
856 889 8.342634 GCACGTTATATCTACCATTGATTTGTT 58.657 33.333 0.00 0.00 0.00 2.83
857 890 9.650371 CACGTTATATCTACCATTGATTTGTTG 57.350 33.333 0.00 0.00 0.00 3.33
858 891 9.391006 ACGTTATATCTACCATTGATTTGTTGT 57.609 29.630 0.00 0.00 0.00 3.32
865 898 7.816640 TCTACCATTGATTTGTTGTTAGAAGC 58.183 34.615 0.00 0.00 0.00 3.86
866 899 6.655078 ACCATTGATTTGTTGTTAGAAGCT 57.345 33.333 0.00 0.00 0.00 3.74
867 900 7.054491 ACCATTGATTTGTTGTTAGAAGCTT 57.946 32.000 0.00 0.00 0.00 3.74
868 901 7.500141 ACCATTGATTTGTTGTTAGAAGCTTT 58.500 30.769 0.00 0.00 0.00 3.51
869 902 7.986889 ACCATTGATTTGTTGTTAGAAGCTTTT 59.013 29.630 0.00 0.00 0.00 2.27
870 903 8.277713 CCATTGATTTGTTGTTAGAAGCTTTTG 58.722 33.333 0.00 0.00 0.00 2.44
884 917 2.468831 GCTTTTGCAAATGGACGAACA 58.531 42.857 22.28 1.34 46.58 3.18
885 918 2.863137 GCTTTTGCAAATGGACGAACAA 59.137 40.909 22.28 0.66 46.58 2.83
886 919 3.308323 GCTTTTGCAAATGGACGAACAAA 59.692 39.130 22.28 0.19 46.58 2.83
887 920 4.201763 GCTTTTGCAAATGGACGAACAAAA 60.202 37.500 22.28 0.00 46.58 2.44
888 921 5.503846 GCTTTTGCAAATGGACGAACAAAAT 60.504 36.000 22.28 0.00 46.58 1.82
889 922 6.428385 TTTTGCAAATGGACGAACAAAATT 57.572 29.167 13.65 0.00 33.46 1.82
890 923 7.539712 TTTTGCAAATGGACGAACAAAATTA 57.460 28.000 13.65 0.00 33.46 1.40
891 924 6.761731 TTGCAAATGGACGAACAAAATTAG 57.238 33.333 0.00 0.00 0.00 1.73
892 925 5.837437 TGCAAATGGACGAACAAAATTAGT 58.163 33.333 0.00 0.00 0.00 2.24
893 926 6.276847 TGCAAATGGACGAACAAAATTAGTT 58.723 32.000 0.00 0.00 0.00 2.24
894 927 6.758886 TGCAAATGGACGAACAAAATTAGTTT 59.241 30.769 0.00 0.00 0.00 2.66
905 938 4.485163 CAAAATTAGTTTGGGCGAAGAGG 58.515 43.478 0.00 0.00 42.57 3.69
906 939 3.713826 AATTAGTTTGGGCGAAGAGGA 57.286 42.857 0.00 0.00 0.00 3.71
907 940 3.933861 ATTAGTTTGGGCGAAGAGGAT 57.066 42.857 0.00 0.00 0.00 3.24
908 941 5.367945 AATTAGTTTGGGCGAAGAGGATA 57.632 39.130 0.00 0.00 0.00 2.59
909 942 5.568620 ATTAGTTTGGGCGAAGAGGATAT 57.431 39.130 0.00 0.00 0.00 1.63
910 943 3.933861 AGTTTGGGCGAAGAGGATATT 57.066 42.857 0.00 0.00 0.00 1.28
911 944 4.236527 AGTTTGGGCGAAGAGGATATTT 57.763 40.909 0.00 0.00 0.00 1.40
912 945 4.600062 AGTTTGGGCGAAGAGGATATTTT 58.400 39.130 0.00 0.00 0.00 1.82
913 946 4.399303 AGTTTGGGCGAAGAGGATATTTTG 59.601 41.667 0.00 0.00 0.00 2.44
914 947 2.930950 TGGGCGAAGAGGATATTTTGG 58.069 47.619 0.00 0.00 0.00 3.28
915 948 2.507886 TGGGCGAAGAGGATATTTTGGA 59.492 45.455 0.00 0.00 0.00 3.53
916 949 3.142174 GGGCGAAGAGGATATTTTGGAG 58.858 50.000 0.00 0.00 0.00 3.86
917 950 3.181454 GGGCGAAGAGGATATTTTGGAGA 60.181 47.826 0.00 0.00 0.00 3.71
918 951 4.061596 GGCGAAGAGGATATTTTGGAGAG 58.938 47.826 0.00 0.00 0.00 3.20
919 952 4.202264 GGCGAAGAGGATATTTTGGAGAGA 60.202 45.833 0.00 0.00 0.00 3.10
920 953 4.747605 GCGAAGAGGATATTTTGGAGAGAC 59.252 45.833 0.00 0.00 0.00 3.36
921 954 4.979197 CGAAGAGGATATTTTGGAGAGACG 59.021 45.833 0.00 0.00 0.00 4.18
922 955 5.221067 CGAAGAGGATATTTTGGAGAGACGA 60.221 44.000 0.00 0.00 0.00 4.20
923 956 6.546428 AAGAGGATATTTTGGAGAGACGAA 57.454 37.500 0.00 0.00 0.00 3.85
924 957 6.739331 AGAGGATATTTTGGAGAGACGAAT 57.261 37.500 0.00 0.00 0.00 3.34
925 958 6.754193 AGAGGATATTTTGGAGAGACGAATC 58.246 40.000 0.00 0.00 0.00 2.52
926 959 6.325028 AGAGGATATTTTGGAGAGACGAATCA 59.675 38.462 0.00 0.00 0.00 2.57
927 960 7.016072 AGAGGATATTTTGGAGAGACGAATCAT 59.984 37.037 0.00 0.00 0.00 2.45
928 961 6.933521 AGGATATTTTGGAGAGACGAATCATG 59.066 38.462 0.00 0.00 0.00 3.07
929 962 6.931281 GGATATTTTGGAGAGACGAATCATGA 59.069 38.462 0.00 0.00 0.00 3.07
930 963 7.442364 GGATATTTTGGAGAGACGAATCATGAA 59.558 37.037 0.00 0.00 0.00 2.57
931 964 6.674694 ATTTTGGAGAGACGAATCATGAAG 57.325 37.500 0.00 0.00 0.00 3.02
932 965 3.808466 TGGAGAGACGAATCATGAAGG 57.192 47.619 0.00 0.00 0.00 3.46
933 966 2.159043 TGGAGAGACGAATCATGAAGGC 60.159 50.000 0.00 0.00 0.00 4.35
934 967 2.478831 GAGAGACGAATCATGAAGGCC 58.521 52.381 0.00 0.00 0.00 5.19
935 968 1.202463 AGAGACGAATCATGAAGGCCG 60.202 52.381 0.00 3.73 0.00 6.13
936 969 0.537188 AGACGAATCATGAAGGCCGT 59.463 50.000 0.00 7.11 0.00 5.68
937 970 0.931005 GACGAATCATGAAGGCCGTC 59.069 55.000 12.27 12.27 39.32 4.79
938 971 0.462047 ACGAATCATGAAGGCCGTCC 60.462 55.000 16.54 0.41 0.00 4.79
939 972 0.461870 CGAATCATGAAGGCCGTCCA 60.462 55.000 16.54 6.72 33.74 4.02
940 973 1.017387 GAATCATGAAGGCCGTCCAC 58.983 55.000 16.54 0.00 33.74 4.02
943 976 0.107703 TCATGAAGGCCGTCCACATC 60.108 55.000 16.54 0.00 32.33 3.06
1107 1162 4.148825 GCCACCGATCCACGAGCT 62.149 66.667 0.00 0.00 45.77 4.09
1108 1163 2.202797 CCACCGATCCACGAGCTG 60.203 66.667 0.00 0.00 45.77 4.24
1118 1173 3.444805 ACGAGCTGACGAGGAGCC 61.445 66.667 1.33 0.00 37.12 4.70
1179 1235 4.168291 GGGGAAGGAGCAGAGCCG 62.168 72.222 0.00 0.00 0.00 5.52
1268 1351 5.835819 CAGGTCTGATCCATACCTCTTCTTA 59.164 44.000 7.57 0.00 38.61 2.10
1294 1380 5.726980 TCAATCTTTCTTGGTTCAATGGG 57.273 39.130 0.00 0.00 0.00 4.00
1347 1436 0.037975 TTCTTGGGTCCGTTCGTAGC 60.038 55.000 0.00 0.00 0.00 3.58
1523 1627 2.169352 CCTCATCGGAACCATCAAGAGT 59.831 50.000 0.00 0.00 33.16 3.24
1534 1638 2.786539 ATCAAGAGTGCGCCGCAGAA 62.787 55.000 14.23 0.00 40.08 3.02
1747 1854 0.370273 GTCGTGTGCAATCCGATGAC 59.630 55.000 6.85 0.00 32.68 3.06
1748 1855 0.739462 TCGTGTGCAATCCGATGACC 60.739 55.000 0.00 0.00 0.00 4.02
1749 1856 1.715585 GTGTGCAATCCGATGACCG 59.284 57.895 0.00 0.00 38.18 4.79
1750 1857 0.739462 GTGTGCAATCCGATGACCGA 60.739 55.000 0.00 0.00 41.76 4.69
1751 1858 0.739462 TGTGCAATCCGATGACCGAC 60.739 55.000 0.00 0.00 41.76 4.79
1752 1859 1.153449 TGCAATCCGATGACCGACC 60.153 57.895 0.00 0.00 41.76 4.79
1753 1860 2.237751 GCAATCCGATGACCGACCG 61.238 63.158 0.00 0.00 41.76 4.79
1754 1861 1.435925 CAATCCGATGACCGACCGA 59.564 57.895 0.00 0.00 41.76 4.69
1755 1862 0.595053 CAATCCGATGACCGACCGAG 60.595 60.000 0.00 0.00 41.76 4.63
1756 1863 2.351336 AATCCGATGACCGACCGAGC 62.351 60.000 0.00 0.00 41.76 5.03
1757 1864 3.822192 CCGATGACCGACCGAGCA 61.822 66.667 0.00 0.00 41.76 4.26
1758 1865 2.278206 CGATGACCGACCGAGCAG 60.278 66.667 0.00 0.00 41.76 4.24
1759 1866 2.885861 GATGACCGACCGAGCAGT 59.114 61.111 0.00 0.00 0.00 4.40
1778 1885 6.745116 AGCAGTGAGTATTTAACCAAAAACC 58.255 36.000 0.00 0.00 0.00 3.27
1798 1905 1.209127 CCACAATTCACGGAACCGC 59.791 57.895 13.32 0.00 44.19 5.68
2106 2291 2.813908 CAGGTCGCCGTTGTAGCC 60.814 66.667 0.00 0.00 0.00 3.93
2107 2292 4.430765 AGGTCGCCGTTGTAGCCG 62.431 66.667 0.00 0.00 0.00 5.52
2108 2293 4.729856 GGTCGCCGTTGTAGCCGT 62.730 66.667 0.00 0.00 0.00 5.68
2109 2294 3.177249 GTCGCCGTTGTAGCCGTC 61.177 66.667 0.00 0.00 0.00 4.79
2110 2295 4.764336 TCGCCGTTGTAGCCGTCG 62.764 66.667 0.00 0.00 0.00 5.12
2113 2298 4.764336 CCGTTGTAGCCGTCGCGA 62.764 66.667 3.71 3.71 41.18 5.87
2114 2299 3.238241 CGTTGTAGCCGTCGCGAG 61.238 66.667 10.24 0.00 41.18 5.03
2115 2300 2.177531 GTTGTAGCCGTCGCGAGA 59.822 61.111 10.24 0.00 41.18 4.04
2116 2301 1.868251 GTTGTAGCCGTCGCGAGAG 60.868 63.158 10.24 6.82 43.49 3.20
2407 3343 8.788806 ACGTGTTTAAAATGGATGAATCTGTTA 58.211 29.630 0.00 0.00 0.00 2.41
2568 3504 2.887152 GTGCTGCCTCCTATAAAATGGG 59.113 50.000 0.00 0.00 0.00 4.00
2576 3515 2.105821 TCCTATAAAATGGGTGGCCGAG 59.894 50.000 0.00 0.00 31.94 4.63
2661 3600 1.066093 TCTCGTTTCGCGGTGTTCA 59.934 52.632 6.13 0.00 41.72 3.18
2675 3614 1.002624 GTTCACGCCCCTCATGGAA 60.003 57.895 0.00 0.00 35.39 3.53
2686 3625 1.209275 CTCATGGAATCGGTCGACGC 61.209 60.000 9.92 1.55 43.86 5.19
2705 3644 0.671796 CCGTGGCGGTATACTCATCA 59.328 55.000 2.25 0.00 42.73 3.07
2716 3655 2.933495 TACTCATCAGAAACCGGACG 57.067 50.000 9.46 0.00 0.00 4.79
3036 3985 3.054802 AGAAGAGTGGACCCTAAAGCATG 60.055 47.826 0.00 0.00 0.00 4.06
3037 3986 2.269940 AGAGTGGACCCTAAAGCATGT 58.730 47.619 0.00 0.00 0.00 3.21
3173 4122 6.369065 CGGAGCATAATGTTATCTTCCTTACC 59.631 42.308 0.00 0.00 0.00 2.85
3190 4139 4.439968 CTTACCGATTGGAAGGAGGTAAC 58.560 47.826 5.81 0.00 41.04 2.50
3249 4198 0.798776 GTGCACCACTGGAGATTTCG 59.201 55.000 5.22 0.00 0.00 3.46
3273 4222 4.579647 GGTGGTCTACCTTTTATTCCCA 57.420 45.455 0.00 0.00 46.51 4.37
3280 4229 5.710567 GTCTACCTTTTATTCCCAGCTTTGT 59.289 40.000 0.00 0.00 0.00 2.83
3299 4311 1.886542 GTGGATTTGGCTCGACCTTTT 59.113 47.619 5.77 0.00 40.22 2.27
3348 4361 1.609208 GCACTGGTTTGGACATGTCT 58.391 50.000 24.50 0.00 0.00 3.41
3421 4437 5.204833 CGTTGAACAATGTTGGTTAGTCTG 58.795 41.667 2.20 0.00 0.00 3.51
3425 4482 5.067153 TGAACAATGTTGGTTAGTCTGTTGG 59.933 40.000 2.20 0.00 0.00 3.77
3456 4513 2.161855 GCATGAATGACTTGGTCACCA 58.838 47.619 0.00 0.00 45.65 4.17
3476 4534 8.265998 GTCACCAAAATATATTTGCGTTTATGC 58.734 33.333 11.42 0.00 0.00 3.14
3584 4648 6.515272 TTCCTGCTGTTATTTCCATTTCTC 57.485 37.500 0.00 0.00 0.00 2.87
3614 4678 8.877779 AGCAAATAGATATTCAATATGACTCGC 58.122 33.333 0.00 0.00 0.00 5.03
3619 4683 1.570813 TTCAATATGACTCGCGCTGG 58.429 50.000 5.56 0.00 0.00 4.85
3699 4775 2.121948 TGGTCTCCTTCTATGCTGCAT 58.878 47.619 20.18 20.18 0.00 3.96
3700 4776 3.308401 TGGTCTCCTTCTATGCTGCATA 58.692 45.455 20.25 20.25 0.00 3.14
3701 4777 3.323115 TGGTCTCCTTCTATGCTGCATAG 59.677 47.826 33.51 33.51 43.52 2.23
3880 4971 7.979444 AACTATGCACTCTTTAAGTTTGCTA 57.021 32.000 16.79 7.91 35.45 3.49
3896 4987 6.464222 AGTTTGCTATTTGTCACTAGCTACA 58.536 36.000 12.53 0.00 40.78 2.74
3920 5011 9.463443 ACAAGTGTGTTTCTAATTAATTTGCTC 57.537 29.630 5.91 0.05 32.58 4.26
3922 5013 9.899226 AAGTGTGTTTCTAATTAATTTGCTCTC 57.101 29.630 5.91 1.38 0.00 3.20
3923 5014 9.066892 AGTGTGTTTCTAATTAATTTGCTCTCA 57.933 29.630 5.91 3.55 0.00 3.27
3926 5017 8.801913 GTGTTTCTAATTAATTTGCTCTCATGC 58.198 33.333 5.91 0.00 0.00 4.06
3928 5019 9.017669 GTTTCTAATTAATTTGCTCTCATGCAG 57.982 33.333 5.91 0.00 44.27 4.41
3929 5020 8.510243 TTCTAATTAATTTGCTCTCATGCAGA 57.490 30.769 5.91 0.00 44.27 4.26
3930 5021 8.510243 TCTAATTAATTTGCTCTCATGCAGAA 57.490 30.769 5.91 0.00 44.27 3.02
3973 5423 1.269723 CATCATGCATCATGCTGGGAC 59.730 52.381 11.84 0.00 45.31 4.46
4057 5573 7.278203 GCTCAAGTATTTAGTACCTGAAAGTCC 59.722 40.741 0.00 0.00 34.27 3.85
4067 5583 3.679389 ACCTGAAAGTCCTGCAGTTATG 58.321 45.455 13.81 0.00 0.00 1.90
4073 5589 5.874810 TGAAAGTCCTGCAGTTATGACATAC 59.125 40.000 19.00 11.41 0.00 2.39
4074 5590 5.683876 AAGTCCTGCAGTTATGACATACT 57.316 39.130 19.00 4.56 0.00 2.12
4075 5591 5.269505 AGTCCTGCAGTTATGACATACTC 57.730 43.478 19.00 0.00 0.00 2.59
4076 5592 4.100189 AGTCCTGCAGTTATGACATACTCC 59.900 45.833 19.00 0.00 0.00 3.85
4077 5593 3.388024 TCCTGCAGTTATGACATACTCCC 59.612 47.826 13.81 0.00 0.00 4.30
4078 5594 3.389329 CCTGCAGTTATGACATACTCCCT 59.611 47.826 13.81 0.00 0.00 4.20
4079 5595 4.502259 CCTGCAGTTATGACATACTCCCTC 60.502 50.000 13.81 0.00 0.00 4.30
4080 5596 3.388024 TGCAGTTATGACATACTCCCTCC 59.612 47.826 0.00 0.00 0.00 4.30
4081 5597 3.553096 GCAGTTATGACATACTCCCTCCG 60.553 52.174 0.00 0.00 0.00 4.63
4082 5598 3.637229 CAGTTATGACATACTCCCTCCGT 59.363 47.826 0.00 0.00 0.00 4.69
4083 5599 4.099573 CAGTTATGACATACTCCCTCCGTT 59.900 45.833 0.00 0.00 0.00 4.44
4084 5600 4.341520 AGTTATGACATACTCCCTCCGTTC 59.658 45.833 0.00 0.00 0.00 3.95
4085 5601 1.481871 TGACATACTCCCTCCGTTCC 58.518 55.000 0.00 0.00 0.00 3.62
4086 5602 0.384669 GACATACTCCCTCCGTTCCG 59.615 60.000 0.00 0.00 0.00 4.30
4087 5603 0.033796 ACATACTCCCTCCGTTCCGA 60.034 55.000 0.00 0.00 0.00 4.55
4088 5604 1.108776 CATACTCCCTCCGTTCCGAA 58.891 55.000 0.00 0.00 0.00 4.30
4089 5605 1.687123 CATACTCCCTCCGTTCCGAAT 59.313 52.381 0.00 0.00 0.00 3.34
4090 5606 1.856629 TACTCCCTCCGTTCCGAATT 58.143 50.000 0.00 0.00 0.00 2.17
4091 5607 1.856629 ACTCCCTCCGTTCCGAATTA 58.143 50.000 0.00 0.00 0.00 1.40
4092 5608 1.479730 ACTCCCTCCGTTCCGAATTAC 59.520 52.381 0.00 0.00 0.00 1.89
4093 5609 1.755380 CTCCCTCCGTTCCGAATTACT 59.245 52.381 0.00 0.00 0.00 2.24
4094 5610 2.167900 CTCCCTCCGTTCCGAATTACTT 59.832 50.000 0.00 0.00 0.00 2.24
4095 5611 2.093869 TCCCTCCGTTCCGAATTACTTG 60.094 50.000 0.00 0.00 0.00 3.16
4096 5612 2.354403 CCCTCCGTTCCGAATTACTTGT 60.354 50.000 0.00 0.00 0.00 3.16
4097 5613 2.928116 CCTCCGTTCCGAATTACTTGTC 59.072 50.000 0.00 0.00 0.00 3.18
4098 5614 3.368116 CCTCCGTTCCGAATTACTTGTCT 60.368 47.826 0.00 0.00 0.00 3.41
4099 5615 3.841643 TCCGTTCCGAATTACTTGTCTC 58.158 45.455 0.00 0.00 0.00 3.36
4100 5616 3.256383 TCCGTTCCGAATTACTTGTCTCA 59.744 43.478 0.00 0.00 0.00 3.27
4101 5617 3.367025 CCGTTCCGAATTACTTGTCTCAC 59.633 47.826 0.00 0.00 0.00 3.51
4102 5618 3.059044 CGTTCCGAATTACTTGTCTCACG 59.941 47.826 0.00 0.00 0.00 4.35
4103 5619 3.928727 TCCGAATTACTTGTCTCACGT 57.071 42.857 0.00 0.00 0.00 4.49
4104 5620 5.156355 GTTCCGAATTACTTGTCTCACGTA 58.844 41.667 0.00 0.00 0.00 3.57
4105 5621 5.571784 TCCGAATTACTTGTCTCACGTAT 57.428 39.130 0.00 0.00 0.00 3.06
4106 5622 5.337554 TCCGAATTACTTGTCTCACGTATG 58.662 41.667 0.00 0.00 0.00 2.39
4107 5623 4.503007 CCGAATTACTTGTCTCACGTATGG 59.497 45.833 0.00 0.00 0.00 2.74
4108 5624 5.337554 CGAATTACTTGTCTCACGTATGGA 58.662 41.667 0.00 0.00 0.00 3.41
4109 5625 5.977725 CGAATTACTTGTCTCACGTATGGAT 59.022 40.000 0.00 0.00 0.00 3.41
4110 5626 6.074835 CGAATTACTTGTCTCACGTATGGATG 60.075 42.308 0.00 0.00 0.00 3.51
4111 5627 5.654603 TTACTTGTCTCACGTATGGATGT 57.345 39.130 0.00 0.00 0.00 3.06
4112 5628 6.762702 TTACTTGTCTCACGTATGGATGTA 57.237 37.500 0.00 0.00 0.00 2.29
4113 5629 5.854010 ACTTGTCTCACGTATGGATGTAT 57.146 39.130 0.00 0.00 0.00 2.29
4114 5630 5.833082 ACTTGTCTCACGTATGGATGTATC 58.167 41.667 0.00 0.00 0.00 2.24
4115 5631 5.594725 ACTTGTCTCACGTATGGATGTATCT 59.405 40.000 0.00 0.00 0.00 1.98
4116 5632 6.771267 ACTTGTCTCACGTATGGATGTATCTA 59.229 38.462 0.00 0.00 0.00 1.98
4117 5633 6.803154 TGTCTCACGTATGGATGTATCTAG 57.197 41.667 0.00 0.00 0.00 2.43
4118 5634 6.531021 TGTCTCACGTATGGATGTATCTAGA 58.469 40.000 0.00 0.00 0.00 2.43
4119 5635 7.168905 TGTCTCACGTATGGATGTATCTAGAT 58.831 38.462 10.73 10.73 0.00 1.98
4120 5636 8.319146 TGTCTCACGTATGGATGTATCTAGATA 58.681 37.037 8.44 8.44 0.00 1.98
4121 5637 9.332502 GTCTCACGTATGGATGTATCTAGATAT 57.667 37.037 15.43 1.62 0.00 1.63
4150 5666 9.547753 TTTAGTTCTAGATACATCCATTTCAGC 57.452 33.333 0.00 0.00 0.00 4.26
4151 5667 6.219473 AGTTCTAGATACATCCATTTCAGCG 58.781 40.000 0.00 0.00 0.00 5.18
4152 5668 6.040955 AGTTCTAGATACATCCATTTCAGCGA 59.959 38.462 0.00 0.00 0.00 4.93
4153 5669 6.596309 TCTAGATACATCCATTTCAGCGAT 57.404 37.500 0.00 0.00 0.00 4.58
4154 5670 6.393171 TCTAGATACATCCATTTCAGCGATG 58.607 40.000 0.00 0.00 39.44 3.84
4155 5671 5.219343 AGATACATCCATTTCAGCGATGA 57.781 39.130 0.00 0.00 37.44 2.92
4156 5672 5.236282 AGATACATCCATTTCAGCGATGAG 58.764 41.667 2.57 0.00 37.44 2.90
4157 5673 3.272574 ACATCCATTTCAGCGATGAGT 57.727 42.857 2.57 0.00 37.44 3.41
4158 5674 4.406648 ACATCCATTTCAGCGATGAGTA 57.593 40.909 2.57 0.00 37.44 2.59
4159 5675 4.769688 ACATCCATTTCAGCGATGAGTAA 58.230 39.130 2.57 0.00 37.44 2.24
4160 5676 5.371526 ACATCCATTTCAGCGATGAGTAAT 58.628 37.500 2.57 0.00 37.44 1.89
4161 5677 5.824624 ACATCCATTTCAGCGATGAGTAATT 59.175 36.000 2.57 0.00 37.44 1.40
4162 5678 6.319658 ACATCCATTTCAGCGATGAGTAATTT 59.680 34.615 2.57 0.00 37.44 1.82
4163 5679 6.122850 TCCATTTCAGCGATGAGTAATTTG 57.877 37.500 2.57 0.00 0.00 2.32
4164 5680 5.066375 TCCATTTCAGCGATGAGTAATTTGG 59.934 40.000 2.57 2.61 0.00 3.28
4165 5681 5.066375 CCATTTCAGCGATGAGTAATTTGGA 59.934 40.000 2.57 0.00 0.00 3.53
4166 5682 6.404623 CCATTTCAGCGATGAGTAATTTGGAA 60.405 38.462 2.57 0.00 0.00 3.53
4167 5683 5.545658 TTCAGCGATGAGTAATTTGGAAC 57.454 39.130 2.57 0.00 0.00 3.62
4168 5684 3.616821 TCAGCGATGAGTAATTTGGAACG 59.383 43.478 0.00 0.00 0.00 3.95
4169 5685 2.936498 AGCGATGAGTAATTTGGAACGG 59.064 45.455 0.00 0.00 0.00 4.44
4170 5686 2.933906 GCGATGAGTAATTTGGAACGGA 59.066 45.455 0.00 0.00 0.00 4.69
4171 5687 3.001330 GCGATGAGTAATTTGGAACGGAG 59.999 47.826 0.00 0.00 0.00 4.63
4172 5688 3.555956 CGATGAGTAATTTGGAACGGAGG 59.444 47.826 0.00 0.00 0.00 4.30
4173 5689 3.343941 TGAGTAATTTGGAACGGAGGG 57.656 47.619 0.00 0.00 0.00 4.30
4174 5690 2.907696 TGAGTAATTTGGAACGGAGGGA 59.092 45.455 0.00 0.00 0.00 4.20
4211 5727 4.106925 CTGGCTCCTCACCCAGGC 62.107 72.222 0.00 0.00 43.87 4.85
4215 5731 2.681778 CTCCTCACCCAGGCGAGT 60.682 66.667 1.27 0.00 43.08 4.18
4325 5844 2.486982 CTGACCATTTGAGCTTCCACTG 59.513 50.000 0.00 0.00 0.00 3.66
4326 5845 2.158623 TGACCATTTGAGCTTCCACTGT 60.159 45.455 0.00 0.00 0.00 3.55
4327 5846 2.485814 GACCATTTGAGCTTCCACTGTC 59.514 50.000 0.00 0.00 0.00 3.51
4467 5990 2.424956 GCCAATGCCTTTGTTCTCCTAG 59.575 50.000 0.00 0.00 33.15 3.02
4505 6028 1.890510 GCACCGGAACCTTGTCGTT 60.891 57.895 9.46 0.00 0.00 3.85
4506 6029 0.600782 GCACCGGAACCTTGTCGTTA 60.601 55.000 9.46 0.00 0.00 3.18
4507 6030 1.425412 CACCGGAACCTTGTCGTTAG 58.575 55.000 9.46 0.00 0.00 2.34
4508 6031 1.043022 ACCGGAACCTTGTCGTTAGT 58.957 50.000 9.46 0.00 0.00 2.24
4509 6032 1.413812 ACCGGAACCTTGTCGTTAGTT 59.586 47.619 9.46 0.00 0.00 2.24
4510 6033 2.158914 ACCGGAACCTTGTCGTTAGTTT 60.159 45.455 9.46 0.00 0.00 2.66
4513 6036 3.805971 CGGAACCTTGTCGTTAGTTTCTT 59.194 43.478 0.00 0.00 0.00 2.52
4514 6037 4.318546 CGGAACCTTGTCGTTAGTTTCTTG 60.319 45.833 0.00 0.00 0.00 3.02
4515 6038 4.573607 GGAACCTTGTCGTTAGTTTCTTGT 59.426 41.667 0.00 0.00 0.00 3.16
4581 6354 3.344515 CAGTCTAGTAAAGTTTGGGGCC 58.655 50.000 0.00 0.00 0.00 5.80
4585 6358 2.673687 TAAAGTTTGGGGCCGCCG 60.674 61.111 18.45 0.00 0.00 6.46
4593 6366 4.397832 GGGGCCGCCGTTCACTTA 62.398 66.667 9.05 0.00 0.00 2.24
4607 6380 5.163794 CCGTTCACTTAAACATGGTATGACC 60.164 44.000 0.00 0.00 39.22 4.02
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
33 36 6.577103 CATGAACTAGCTAAATCACTCCTGA 58.423 40.000 9.61 0.00 0.00 3.86
213 222 5.473504 CACCACCAACACTAGCTTAAAGAAT 59.526 40.000 0.00 0.00 0.00 2.40
494 516 0.740737 GCGTAGGGCTTTAGTACCGA 59.259 55.000 0.00 0.00 39.11 4.69
624 657 1.045407 TGACAGCCTTTAGTGTCGGT 58.955 50.000 0.00 0.00 45.13 4.69
673 706 0.321653 CAGAACCGGCCTTTAGTGCT 60.322 55.000 0.00 0.00 0.00 4.40
701 734 2.351835 CCACTAGGCGTCGATATTGGAG 60.352 54.545 0.00 0.00 0.00 3.86
702 735 1.611977 CCACTAGGCGTCGATATTGGA 59.388 52.381 0.00 0.00 0.00 3.53
703 736 1.340248 ACCACTAGGCGTCGATATTGG 59.660 52.381 0.00 4.71 39.06 3.16
704 737 2.795175 ACCACTAGGCGTCGATATTG 57.205 50.000 0.00 0.00 39.06 1.90
705 738 2.035576 GGAACCACTAGGCGTCGATATT 59.964 50.000 0.00 0.00 39.06 1.28
706 739 1.612463 GGAACCACTAGGCGTCGATAT 59.388 52.381 0.00 0.00 39.06 1.63
707 740 1.027357 GGAACCACTAGGCGTCGATA 58.973 55.000 0.00 0.00 39.06 2.92
708 741 1.814527 GGAACCACTAGGCGTCGAT 59.185 57.895 0.00 0.00 39.06 3.59
709 742 3.281240 GGAACCACTAGGCGTCGA 58.719 61.111 0.00 0.00 39.06 4.20
722 755 6.469782 AATGTTGTTATGGATGATGGGAAC 57.530 37.500 0.00 0.00 0.00 3.62
724 757 8.780616 AATTAATGTTGTTATGGATGATGGGA 57.219 30.769 0.00 0.00 0.00 4.37
725 758 7.809331 CGAATTAATGTTGTTATGGATGATGGG 59.191 37.037 0.00 0.00 0.00 4.00
727 760 7.326789 GCCGAATTAATGTTGTTATGGATGATG 59.673 37.037 0.00 0.00 0.00 3.07
729 762 6.512578 CGCCGAATTAATGTTGTTATGGATGA 60.513 38.462 0.00 0.00 0.00 2.92
730 763 5.624900 CGCCGAATTAATGTTGTTATGGATG 59.375 40.000 0.00 0.00 0.00 3.51
732 765 4.876679 TCGCCGAATTAATGTTGTTATGGA 59.123 37.500 0.00 0.00 0.00 3.41
733 766 5.163302 TCGCCGAATTAATGTTGTTATGG 57.837 39.130 0.00 0.00 0.00 2.74
734 767 6.255215 AGTTCGCCGAATTAATGTTGTTATG 58.745 36.000 1.55 0.00 0.00 1.90
735 768 6.431198 AGTTCGCCGAATTAATGTTGTTAT 57.569 33.333 1.55 0.00 0.00 1.89
736 769 5.866335 AGTTCGCCGAATTAATGTTGTTA 57.134 34.783 1.55 0.00 0.00 2.41
737 770 4.759516 AGTTCGCCGAATTAATGTTGTT 57.240 36.364 1.55 0.00 0.00 2.83
738 771 4.759516 AAGTTCGCCGAATTAATGTTGT 57.240 36.364 1.55 0.00 0.00 3.32
739 772 5.150683 TGAAAGTTCGCCGAATTAATGTTG 58.849 37.500 1.55 0.00 0.00 3.33
740 773 5.365403 TGAAAGTTCGCCGAATTAATGTT 57.635 34.783 1.55 0.00 0.00 2.71
741 774 5.560966 ATGAAAGTTCGCCGAATTAATGT 57.439 34.783 1.55 0.00 0.00 2.71
742 775 5.169561 CGAATGAAAGTTCGCCGAATTAATG 59.830 40.000 1.55 0.00 43.56 1.90
744 777 4.643953 CGAATGAAAGTTCGCCGAATTAA 58.356 39.130 1.55 0.00 43.56 1.40
745 778 4.253352 CGAATGAAAGTTCGCCGAATTA 57.747 40.909 1.55 0.00 43.56 1.40
746 779 3.117434 CGAATGAAAGTTCGCCGAATT 57.883 42.857 1.55 0.00 43.56 2.17
754 787 4.594136 ACAAACCGAACGAATGAAAGTTC 58.406 39.130 0.00 0.00 42.23 3.01
755 788 4.625972 ACAAACCGAACGAATGAAAGTT 57.374 36.364 0.00 0.00 0.00 2.66
758 791 3.109619 GCAACAAACCGAACGAATGAAA 58.890 40.909 0.00 0.00 0.00 2.69
759 792 2.097629 TGCAACAAACCGAACGAATGAA 59.902 40.909 0.00 0.00 0.00 2.57
760 793 1.671328 TGCAACAAACCGAACGAATGA 59.329 42.857 0.00 0.00 0.00 2.57
761 794 2.112475 TGCAACAAACCGAACGAATG 57.888 45.000 0.00 0.00 0.00 2.67
762 795 3.243234 TGAATGCAACAAACCGAACGAAT 60.243 39.130 0.00 0.00 0.00 3.34
764 797 1.671328 TGAATGCAACAAACCGAACGA 59.329 42.857 0.00 0.00 0.00 3.85
765 798 2.112475 TGAATGCAACAAACCGAACG 57.888 45.000 0.00 0.00 0.00 3.95
766 799 3.184178 CCATTGAATGCAACAAACCGAAC 59.816 43.478 12.36 0.00 36.72 3.95
767 800 3.181471 ACCATTGAATGCAACAAACCGAA 60.181 39.130 12.36 0.00 36.72 4.30
768 801 2.363680 ACCATTGAATGCAACAAACCGA 59.636 40.909 12.36 0.00 36.72 4.69
770 803 2.807392 CCACCATTGAATGCAACAAACC 59.193 45.455 12.36 0.00 36.72 3.27
772 805 4.620589 ATCCACCATTGAATGCAACAAA 57.379 36.364 12.36 0.00 36.72 2.83
774 807 4.202336 ACAAATCCACCATTGAATGCAACA 60.202 37.500 0.00 0.00 36.72 3.33
775 808 4.317488 ACAAATCCACCATTGAATGCAAC 58.683 39.130 0.00 0.00 36.72 4.17
776 809 4.620589 ACAAATCCACCATTGAATGCAA 57.379 36.364 0.00 0.00 38.60 4.08
778 811 4.567971 TCAACAAATCCACCATTGAATGC 58.432 39.130 0.00 0.00 0.00 3.56
779 812 6.146510 CAGTTCAACAAATCCACCATTGAATG 59.853 38.462 0.00 0.00 40.36 2.67
780 813 6.183360 ACAGTTCAACAAATCCACCATTGAAT 60.183 34.615 0.00 0.00 40.36 2.57
781 814 5.128499 ACAGTTCAACAAATCCACCATTGAA 59.872 36.000 0.00 0.00 37.03 2.69
782 815 4.648762 ACAGTTCAACAAATCCACCATTGA 59.351 37.500 0.00 0.00 0.00 2.57
785 818 5.104982 ACAAACAGTTCAACAAATCCACCAT 60.105 36.000 0.00 0.00 0.00 3.55
786 819 4.221703 ACAAACAGTTCAACAAATCCACCA 59.778 37.500 0.00 0.00 0.00 4.17
788 821 5.406649 TGACAAACAGTTCAACAAATCCAC 58.593 37.500 0.00 0.00 0.00 4.02
789 822 5.651387 TGACAAACAGTTCAACAAATCCA 57.349 34.783 0.00 0.00 0.00 3.41
790 823 5.050837 GCATGACAAACAGTTCAACAAATCC 60.051 40.000 0.00 0.00 0.00 3.01
791 824 5.519566 TGCATGACAAACAGTTCAACAAATC 59.480 36.000 0.00 0.00 0.00 2.17
793 826 4.814147 TGCATGACAAACAGTTCAACAAA 58.186 34.783 0.00 0.00 0.00 2.83
794 827 4.446994 TGCATGACAAACAGTTCAACAA 57.553 36.364 0.00 0.00 0.00 2.83
826 859 6.350103 TCAATGGTAGATATAACGTGCCAAA 58.650 36.000 0.00 0.00 0.00 3.28
828 861 5.538849 TCAATGGTAGATATAACGTGCCA 57.461 39.130 0.00 0.00 0.00 4.92
829 862 7.041372 ACAAATCAATGGTAGATATAACGTGCC 60.041 37.037 0.00 0.00 0.00 5.01
830 863 7.861630 ACAAATCAATGGTAGATATAACGTGC 58.138 34.615 0.00 0.00 0.00 5.34
831 864 9.650371 CAACAAATCAATGGTAGATATAACGTG 57.350 33.333 0.00 0.00 0.00 4.49
832 865 9.391006 ACAACAAATCAATGGTAGATATAACGT 57.609 29.630 0.00 0.00 0.00 3.99
839 872 8.462016 GCTTCTAACAACAAATCAATGGTAGAT 58.538 33.333 1.05 0.00 41.57 1.98
840 873 7.665559 AGCTTCTAACAACAAATCAATGGTAGA 59.334 33.333 0.00 0.00 40.59 2.59
842 875 7.759489 AGCTTCTAACAACAAATCAATGGTA 57.241 32.000 0.00 0.00 0.00 3.25
843 876 6.655078 AGCTTCTAACAACAAATCAATGGT 57.345 33.333 0.00 0.00 0.00 3.55
844 877 7.951530 AAAGCTTCTAACAACAAATCAATGG 57.048 32.000 0.00 0.00 0.00 3.16
845 878 7.795272 GCAAAAGCTTCTAACAACAAATCAATG 59.205 33.333 0.00 0.00 0.00 2.82
846 879 7.495279 TGCAAAAGCTTCTAACAACAAATCAAT 59.505 29.630 0.00 0.00 0.00 2.57
847 880 6.815641 TGCAAAAGCTTCTAACAACAAATCAA 59.184 30.769 0.00 0.00 0.00 2.57
848 881 6.336566 TGCAAAAGCTTCTAACAACAAATCA 58.663 32.000 0.00 0.00 0.00 2.57
849 882 6.826893 TGCAAAAGCTTCTAACAACAAATC 57.173 33.333 0.00 0.00 0.00 2.17
850 883 7.608308 TTTGCAAAAGCTTCTAACAACAAAT 57.392 28.000 10.02 0.00 0.00 2.32
851 884 7.413877 CCATTTGCAAAAGCTTCTAACAACAAA 60.414 33.333 17.19 4.98 0.00 2.83
852 885 6.036953 CCATTTGCAAAAGCTTCTAACAACAA 59.963 34.615 17.19 0.00 0.00 2.83
853 886 5.523188 CCATTTGCAAAAGCTTCTAACAACA 59.477 36.000 17.19 0.00 0.00 3.33
854 887 5.752955 TCCATTTGCAAAAGCTTCTAACAAC 59.247 36.000 17.19 0.00 0.00 3.32
855 888 5.752955 GTCCATTTGCAAAAGCTTCTAACAA 59.247 36.000 17.19 0.00 0.00 2.83
856 889 5.288804 GTCCATTTGCAAAAGCTTCTAACA 58.711 37.500 17.19 0.00 0.00 2.41
857 890 4.382754 CGTCCATTTGCAAAAGCTTCTAAC 59.617 41.667 17.19 5.54 0.00 2.34
858 891 4.277174 TCGTCCATTTGCAAAAGCTTCTAA 59.723 37.500 17.19 0.00 0.00 2.10
859 892 3.818210 TCGTCCATTTGCAAAAGCTTCTA 59.182 39.130 17.19 0.00 0.00 2.10
860 893 2.622942 TCGTCCATTTGCAAAAGCTTCT 59.377 40.909 17.19 0.00 0.00 2.85
861 894 3.011949 TCGTCCATTTGCAAAAGCTTC 57.988 42.857 17.19 5.46 0.00 3.86
862 895 3.123050 GTTCGTCCATTTGCAAAAGCTT 58.877 40.909 17.19 0.00 0.00 3.74
863 896 2.100584 TGTTCGTCCATTTGCAAAAGCT 59.899 40.909 17.19 0.00 0.00 3.74
864 897 2.468831 TGTTCGTCCATTTGCAAAAGC 58.531 42.857 17.19 5.85 0.00 3.51
865 898 5.462034 TTTTGTTCGTCCATTTGCAAAAG 57.538 34.783 17.19 12.00 32.95 2.27
866 899 6.428385 AATTTTGTTCGTCCATTTGCAAAA 57.572 29.167 17.19 0.00 39.21 2.44
867 900 6.758886 ACTAATTTTGTTCGTCCATTTGCAAA 59.241 30.769 15.44 15.44 0.00 3.68
868 901 6.276847 ACTAATTTTGTTCGTCCATTTGCAA 58.723 32.000 0.00 0.00 0.00 4.08
869 902 5.837437 ACTAATTTTGTTCGTCCATTTGCA 58.163 33.333 0.00 0.00 0.00 4.08
870 903 6.763303 AACTAATTTTGTTCGTCCATTTGC 57.237 33.333 0.00 0.00 0.00 3.68
871 904 7.307101 CCCAAACTAATTTTGTTCGTCCATTTG 60.307 37.037 0.00 0.00 42.86 2.32
872 905 6.704050 CCCAAACTAATTTTGTTCGTCCATTT 59.296 34.615 0.00 0.00 42.86 2.32
873 906 6.220201 CCCAAACTAATTTTGTTCGTCCATT 58.780 36.000 0.00 0.00 42.86 3.16
874 907 5.778862 CCCAAACTAATTTTGTTCGTCCAT 58.221 37.500 0.00 0.00 42.86 3.41
875 908 4.500035 GCCCAAACTAATTTTGTTCGTCCA 60.500 41.667 0.00 0.00 42.86 4.02
876 909 3.985279 GCCCAAACTAATTTTGTTCGTCC 59.015 43.478 0.00 0.00 42.86 4.79
877 910 3.666797 CGCCCAAACTAATTTTGTTCGTC 59.333 43.478 0.00 0.00 42.86 4.20
878 911 3.315749 TCGCCCAAACTAATTTTGTTCGT 59.684 39.130 0.00 0.00 42.86 3.85
879 912 3.891324 TCGCCCAAACTAATTTTGTTCG 58.109 40.909 0.00 0.00 42.86 3.95
880 913 5.525199 TCTTCGCCCAAACTAATTTTGTTC 58.475 37.500 0.00 0.00 42.86 3.18
881 914 5.508994 CCTCTTCGCCCAAACTAATTTTGTT 60.509 40.000 0.00 0.00 42.86 2.83
882 915 4.022329 CCTCTTCGCCCAAACTAATTTTGT 60.022 41.667 0.00 0.00 42.86 2.83
883 916 4.217550 TCCTCTTCGCCCAAACTAATTTTG 59.782 41.667 0.00 0.00 43.86 2.44
884 917 4.403734 TCCTCTTCGCCCAAACTAATTTT 58.596 39.130 0.00 0.00 0.00 1.82
885 918 4.028993 TCCTCTTCGCCCAAACTAATTT 57.971 40.909 0.00 0.00 0.00 1.82
886 919 3.713826 TCCTCTTCGCCCAAACTAATT 57.286 42.857 0.00 0.00 0.00 1.40
887 920 3.933861 ATCCTCTTCGCCCAAACTAAT 57.066 42.857 0.00 0.00 0.00 1.73
888 921 5.367945 AATATCCTCTTCGCCCAAACTAA 57.632 39.130 0.00 0.00 0.00 2.24
889 922 5.367945 AAATATCCTCTTCGCCCAAACTA 57.632 39.130 0.00 0.00 0.00 2.24
890 923 3.933861 AATATCCTCTTCGCCCAAACT 57.066 42.857 0.00 0.00 0.00 2.66
891 924 4.440112 CCAAAATATCCTCTTCGCCCAAAC 60.440 45.833 0.00 0.00 0.00 2.93
892 925 3.699038 CCAAAATATCCTCTTCGCCCAAA 59.301 43.478 0.00 0.00 0.00 3.28
893 926 3.053991 TCCAAAATATCCTCTTCGCCCAA 60.054 43.478 0.00 0.00 0.00 4.12
894 927 2.507886 TCCAAAATATCCTCTTCGCCCA 59.492 45.455 0.00 0.00 0.00 5.36
895 928 3.142174 CTCCAAAATATCCTCTTCGCCC 58.858 50.000 0.00 0.00 0.00 6.13
896 929 4.061596 CTCTCCAAAATATCCTCTTCGCC 58.938 47.826 0.00 0.00 0.00 5.54
897 930 4.747605 GTCTCTCCAAAATATCCTCTTCGC 59.252 45.833 0.00 0.00 0.00 4.70
898 931 4.979197 CGTCTCTCCAAAATATCCTCTTCG 59.021 45.833 0.00 0.00 0.00 3.79
899 932 6.150396 TCGTCTCTCCAAAATATCCTCTTC 57.850 41.667 0.00 0.00 0.00 2.87
900 933 6.546428 TTCGTCTCTCCAAAATATCCTCTT 57.454 37.500 0.00 0.00 0.00 2.85
901 934 6.325028 TGATTCGTCTCTCCAAAATATCCTCT 59.675 38.462 0.00 0.00 0.00 3.69
902 935 6.516718 TGATTCGTCTCTCCAAAATATCCTC 58.483 40.000 0.00 0.00 0.00 3.71
903 936 6.485830 TGATTCGTCTCTCCAAAATATCCT 57.514 37.500 0.00 0.00 0.00 3.24
904 937 6.931281 TCATGATTCGTCTCTCCAAAATATCC 59.069 38.462 0.00 0.00 0.00 2.59
905 938 7.953158 TCATGATTCGTCTCTCCAAAATATC 57.047 36.000 0.00 0.00 0.00 1.63
906 939 7.443575 CCTTCATGATTCGTCTCTCCAAAATAT 59.556 37.037 0.00 0.00 0.00 1.28
907 940 6.763135 CCTTCATGATTCGTCTCTCCAAAATA 59.237 38.462 0.00 0.00 0.00 1.40
908 941 5.587844 CCTTCATGATTCGTCTCTCCAAAAT 59.412 40.000 0.00 0.00 0.00 1.82
909 942 4.937620 CCTTCATGATTCGTCTCTCCAAAA 59.062 41.667 0.00 0.00 0.00 2.44
910 943 4.507710 CCTTCATGATTCGTCTCTCCAAA 58.492 43.478 0.00 0.00 0.00 3.28
911 944 3.679917 GCCTTCATGATTCGTCTCTCCAA 60.680 47.826 0.00 0.00 0.00 3.53
912 945 2.159043 GCCTTCATGATTCGTCTCTCCA 60.159 50.000 0.00 0.00 0.00 3.86
913 946 2.478831 GCCTTCATGATTCGTCTCTCC 58.521 52.381 0.00 0.00 0.00 3.71
914 947 2.478831 GGCCTTCATGATTCGTCTCTC 58.521 52.381 0.00 0.00 0.00 3.20
915 948 1.202463 CGGCCTTCATGATTCGTCTCT 60.202 52.381 0.00 0.00 0.00 3.10
916 949 1.212616 CGGCCTTCATGATTCGTCTC 58.787 55.000 0.00 0.00 0.00 3.36
917 950 0.537188 ACGGCCTTCATGATTCGTCT 59.463 50.000 0.00 0.00 0.00 4.18
918 951 0.931005 GACGGCCTTCATGATTCGTC 59.069 55.000 17.93 17.93 39.73 4.20
919 952 0.462047 GGACGGCCTTCATGATTCGT 60.462 55.000 11.89 4.58 0.00 3.85
920 953 0.461870 TGGACGGCCTTCATGATTCG 60.462 55.000 9.82 1.17 34.31 3.34
921 954 1.017387 GTGGACGGCCTTCATGATTC 58.983 55.000 9.82 0.00 34.31 2.52
922 955 0.327924 TGTGGACGGCCTTCATGATT 59.672 50.000 9.82 0.00 34.31 2.57
923 956 0.548031 ATGTGGACGGCCTTCATGAT 59.452 50.000 9.82 0.00 31.80 2.45
924 957 0.107703 GATGTGGACGGCCTTCATGA 60.108 55.000 20.03 0.00 32.63 3.07
925 958 0.107508 AGATGTGGACGGCCTTCATG 60.108 55.000 20.03 0.00 32.63 3.07
926 959 1.139058 GTAGATGTGGACGGCCTTCAT 59.861 52.381 9.82 13.87 34.18 2.57
927 960 0.535335 GTAGATGTGGACGGCCTTCA 59.465 55.000 9.82 8.77 34.31 3.02
928 961 0.535335 TGTAGATGTGGACGGCCTTC 59.465 55.000 9.82 0.00 34.31 3.46
929 962 1.204146 ATGTAGATGTGGACGGCCTT 58.796 50.000 9.82 0.00 34.31 4.35
930 963 1.687123 GTATGTAGATGTGGACGGCCT 59.313 52.381 9.82 0.00 34.31 5.19
931 964 1.602165 CGTATGTAGATGTGGACGGCC 60.602 57.143 0.00 0.00 0.00 6.13
932 965 1.602165 CCGTATGTAGATGTGGACGGC 60.602 57.143 0.00 0.00 42.81 5.68
933 966 2.417339 CCGTATGTAGATGTGGACGG 57.583 55.000 0.00 0.00 43.27 4.79
934 967 2.996155 GTCCGTATGTAGATGTGGACG 58.004 52.381 8.84 0.00 36.84 4.79
935 968 2.615447 TCGTCCGTATGTAGATGTGGAC 59.385 50.000 12.64 12.64 41.87 4.02
936 969 2.921821 TCGTCCGTATGTAGATGTGGA 58.078 47.619 0.00 0.00 0.00 4.02
937 970 3.917329 ATCGTCCGTATGTAGATGTGG 57.083 47.619 0.00 0.00 0.00 4.17
938 971 6.843208 AGATAATCGTCCGTATGTAGATGTG 58.157 40.000 0.00 0.00 0.00 3.21
939 972 6.183360 CGAGATAATCGTCCGTATGTAGATGT 60.183 42.308 0.00 0.00 46.62 3.06
940 973 6.186092 CGAGATAATCGTCCGTATGTAGATG 58.814 44.000 0.00 0.00 46.62 2.90
1046 1084 4.893601 GCTCGCCGGAACTAGGGC 62.894 72.222 5.05 0.00 45.95 5.19
1107 1162 3.838271 GCATCGGGCTCCTCGTCA 61.838 66.667 0.00 0.00 40.25 4.35
1108 1163 4.593864 GGCATCGGGCTCCTCGTC 62.594 72.222 0.23 0.00 44.01 4.20
1231 1287 1.142097 GACCTGAGAAGCTACGGCC 59.858 63.158 0.00 0.00 39.73 6.13
1268 1351 7.156673 CCATTGAACCAAGAAAGATTGATTGT 58.843 34.615 0.00 0.00 31.55 2.71
1294 1380 3.930012 CTCCCGGCCGATTCCCTC 61.930 72.222 30.73 0.00 0.00 4.30
1347 1436 2.387757 CCTCCTCTTCTTCCTCCTCTG 58.612 57.143 0.00 0.00 0.00 3.35
1509 1613 1.648467 GGCGCACTCTTGATGGTTCC 61.648 60.000 10.83 0.00 0.00 3.62
1513 1617 3.869272 GCGGCGCACTCTTGATGG 61.869 66.667 29.21 0.00 0.00 3.51
1581 1685 3.427425 TCCGCCGGACAAATTGCG 61.427 61.111 5.05 0.00 46.14 4.85
1747 1854 0.456221 AATACTCACTGCTCGGTCGG 59.544 55.000 0.00 0.00 0.00 4.79
1748 1855 2.279582 AAATACTCACTGCTCGGTCG 57.720 50.000 0.00 0.00 0.00 4.79
1749 1856 3.864003 GGTTAAATACTCACTGCTCGGTC 59.136 47.826 0.00 0.00 0.00 4.79
1750 1857 3.259876 TGGTTAAATACTCACTGCTCGGT 59.740 43.478 0.00 0.00 0.00 4.69
1751 1858 3.857052 TGGTTAAATACTCACTGCTCGG 58.143 45.455 0.00 0.00 0.00 4.63
1752 1859 5.856126 TTTGGTTAAATACTCACTGCTCG 57.144 39.130 0.00 0.00 0.00 5.03
1753 1860 6.861572 GGTTTTTGGTTAAATACTCACTGCTC 59.138 38.462 0.00 0.00 31.16 4.26
1754 1861 6.322712 TGGTTTTTGGTTAAATACTCACTGCT 59.677 34.615 0.00 0.00 31.16 4.24
1755 1862 6.419710 GTGGTTTTTGGTTAAATACTCACTGC 59.580 38.462 0.00 0.00 32.75 4.40
1756 1863 6.921307 GGTGGTTTTTGGTTAAATACTCACTG 59.079 38.462 0.00 0.00 34.08 3.66
1757 1864 6.608002 TGGTGGTTTTTGGTTAAATACTCACT 59.392 34.615 0.00 0.00 34.08 3.41
1758 1865 6.698329 GTGGTGGTTTTTGGTTAAATACTCAC 59.302 38.462 0.00 0.00 33.57 3.51
1759 1866 6.380274 TGTGGTGGTTTTTGGTTAAATACTCA 59.620 34.615 0.00 0.00 31.16 3.41
1778 1885 0.237235 CGGTTCCGTGAATTGTGGTG 59.763 55.000 2.82 0.00 0.00 4.17
1798 1905 3.833061 CGCAAAGTGATAGTTTTTCGTCG 59.167 43.478 0.00 0.00 0.00 5.12
2102 2287 3.877357 CAGCTCTCGCGACGGCTA 61.877 66.667 24.26 0.00 42.32 3.93
2455 3391 4.486574 TTACGATTTTGTCCCGAAAACC 57.513 40.909 0.00 0.00 0.00 3.27
2568 3504 1.519455 CTTCATCGTCCTCGGCCAC 60.519 63.158 2.24 0.00 37.69 5.01
2572 3511 2.107141 GGCCTTCATCGTCCTCGG 59.893 66.667 0.00 0.00 37.69 4.63
2576 3515 0.181350 ATTCAGGGCCTTCATCGTCC 59.819 55.000 1.32 0.00 0.00 4.79
2661 3600 2.505982 CGATTCCATGAGGGGCGT 59.494 61.111 0.00 0.00 37.22 5.68
2705 3644 2.240162 GAGCCCATCGTCCGGTTTCT 62.240 60.000 0.00 0.00 0.00 2.52
3173 4122 3.195825 ACAGAGTTACCTCCTTCCAATCG 59.804 47.826 0.00 0.00 38.58 3.34
3273 4222 0.883833 CGAGCCAAATCCACAAAGCT 59.116 50.000 0.00 0.00 0.00 3.74
3280 4229 2.159382 GAAAAGGTCGAGCCAAATCCA 58.841 47.619 11.73 0.00 40.61 3.41
3299 4311 7.228706 GGAACCAACTAGAAGAGTGATTTTTGA 59.771 37.037 0.00 0.00 38.87 2.69
3348 4361 7.725397 AGCACATATAATTTGGAATGCTAGGAA 59.275 33.333 4.85 0.00 40.25 3.36
3421 4437 4.735662 TTCATGCAACGTACTAACCAAC 57.264 40.909 0.00 0.00 0.00 3.77
3425 4482 5.779806 AGTCATTCATGCAACGTACTAAC 57.220 39.130 0.00 0.00 0.00 2.34
3476 4534 6.650807 ACAAGTGACCACATTAATCAGTACTG 59.349 38.462 17.17 17.17 0.00 2.74
3612 4676 3.720193 GCATAGATGGCCAGCGCG 61.720 66.667 16.75 9.20 35.02 6.86
3613 4677 2.281345 AGCATAGATGGCCAGCGC 60.281 61.111 16.75 13.51 0.00 5.92
3614 4678 0.533531 TTCAGCATAGATGGCCAGCG 60.534 55.000 16.75 2.14 0.00 5.18
3619 4683 4.517832 TCATCAATGTTCAGCATAGATGGC 59.482 41.667 0.00 0.00 36.67 4.40
3699 4775 8.982091 AGCATCTCTTTACACTCTGTATACTA 57.018 34.615 4.17 0.00 32.20 1.82
3700 4776 7.889873 AGCATCTCTTTACACTCTGTATACT 57.110 36.000 4.17 0.00 32.20 2.12
3701 4777 8.842280 ACTAGCATCTCTTTACACTCTGTATAC 58.158 37.037 0.00 0.00 32.20 1.47
3771 4854 8.420222 GCTCACTATATCAGGTAAGATGCATAT 58.580 37.037 0.00 0.00 0.00 1.78
3815 4906 2.867109 TTGCTCTCTCCCCTGAAAAG 57.133 50.000 0.00 0.00 0.00 2.27
3880 4971 5.611374 ACACACTTGTAGCTAGTGACAAAT 58.389 37.500 19.59 0.00 44.52 2.32
3896 4987 9.899226 GAGAGCAAATTAATTAGAAACACACTT 57.101 29.630 0.01 0.00 0.00 3.16
3917 5008 2.627515 TACCCATTCTGCATGAGAGC 57.372 50.000 0.00 0.00 34.31 4.09
3920 5011 5.840243 TTGAATTACCCATTCTGCATGAG 57.160 39.130 0.00 0.00 41.91 2.90
3922 5013 4.799949 CGTTTGAATTACCCATTCTGCATG 59.200 41.667 0.00 0.00 41.91 4.06
3923 5014 4.142182 CCGTTTGAATTACCCATTCTGCAT 60.142 41.667 0.00 0.00 41.91 3.96
3926 5017 3.192422 TGCCGTTTGAATTACCCATTCTG 59.808 43.478 0.00 0.00 41.91 3.02
3928 5019 3.057174 TGTGCCGTTTGAATTACCCATTC 60.057 43.478 0.00 0.00 41.76 2.67
3929 5020 2.894126 TGTGCCGTTTGAATTACCCATT 59.106 40.909 0.00 0.00 0.00 3.16
3930 5021 2.520069 TGTGCCGTTTGAATTACCCAT 58.480 42.857 0.00 0.00 0.00 4.00
3962 5412 1.845791 ACACCATATGTCCCAGCATGA 59.154 47.619 0.00 0.00 36.54 3.07
3963 5413 2.353357 ACACCATATGTCCCAGCATG 57.647 50.000 1.24 0.00 36.54 4.06
4057 5573 4.502259 GGAGGGAGTATGTCATAACTGCAG 60.502 50.000 13.48 13.48 35.93 4.41
4080 5596 7.378882 ATACGTGAGACAAGTAATTCGGAACG 61.379 42.308 0.00 0.00 41.59 3.95
4081 5597 3.985925 ACGTGAGACAAGTAATTCGGAAC 59.014 43.478 0.00 0.00 0.00 3.62
4082 5598 4.247267 ACGTGAGACAAGTAATTCGGAA 57.753 40.909 0.00 0.00 0.00 4.30
4083 5599 3.928727 ACGTGAGACAAGTAATTCGGA 57.071 42.857 0.00 0.00 0.00 4.55
4084 5600 4.503007 CCATACGTGAGACAAGTAATTCGG 59.497 45.833 0.00 0.00 32.82 4.30
4085 5601 5.337554 TCCATACGTGAGACAAGTAATTCG 58.662 41.667 0.00 0.00 32.82 3.34
4086 5602 6.757010 ACATCCATACGTGAGACAAGTAATTC 59.243 38.462 0.00 0.00 32.82 2.17
4087 5603 6.640518 ACATCCATACGTGAGACAAGTAATT 58.359 36.000 0.00 0.00 32.82 1.40
4088 5604 6.222038 ACATCCATACGTGAGACAAGTAAT 57.778 37.500 0.00 0.00 32.82 1.89
4089 5605 5.654603 ACATCCATACGTGAGACAAGTAA 57.345 39.130 0.00 0.00 32.82 2.24
4090 5606 6.771267 AGATACATCCATACGTGAGACAAGTA 59.229 38.462 0.00 0.00 33.49 2.24
4091 5607 5.594725 AGATACATCCATACGTGAGACAAGT 59.405 40.000 0.00 0.00 0.00 3.16
4092 5608 6.078202 AGATACATCCATACGTGAGACAAG 57.922 41.667 0.00 0.00 0.00 3.16
4093 5609 6.996282 TCTAGATACATCCATACGTGAGACAA 59.004 38.462 0.00 0.00 0.00 3.18
4094 5610 6.531021 TCTAGATACATCCATACGTGAGACA 58.469 40.000 0.00 0.00 0.00 3.41
4095 5611 7.618502 ATCTAGATACATCCATACGTGAGAC 57.381 40.000 2.53 0.00 0.00 3.36
4124 5640 9.547753 GCTGAAATGGATGTATCTAGAACTAAA 57.452 33.333 0.00 0.00 0.00 1.85
4125 5641 7.867909 CGCTGAAATGGATGTATCTAGAACTAA 59.132 37.037 0.00 0.00 0.00 2.24
4126 5642 7.230712 TCGCTGAAATGGATGTATCTAGAACTA 59.769 37.037 0.00 0.00 0.00 2.24
4127 5643 6.040955 TCGCTGAAATGGATGTATCTAGAACT 59.959 38.462 0.00 0.00 0.00 3.01
4128 5644 6.216569 TCGCTGAAATGGATGTATCTAGAAC 58.783 40.000 0.00 0.00 0.00 3.01
4129 5645 6.405278 TCGCTGAAATGGATGTATCTAGAA 57.595 37.500 0.00 0.00 0.00 2.10
4130 5646 6.209391 TCATCGCTGAAATGGATGTATCTAGA 59.791 38.462 0.00 0.00 38.86 2.43
4131 5647 6.393171 TCATCGCTGAAATGGATGTATCTAG 58.607 40.000 0.00 0.00 38.86 2.43
4132 5648 6.015095 ACTCATCGCTGAAATGGATGTATCTA 60.015 38.462 0.00 0.00 38.86 1.98
4133 5649 5.219343 TCATCGCTGAAATGGATGTATCT 57.781 39.130 0.00 0.00 38.86 1.98
4134 5650 4.993584 ACTCATCGCTGAAATGGATGTATC 59.006 41.667 0.00 0.00 38.86 2.24
4135 5651 4.965814 ACTCATCGCTGAAATGGATGTAT 58.034 39.130 0.00 0.00 38.86 2.29
4136 5652 4.406648 ACTCATCGCTGAAATGGATGTA 57.593 40.909 0.00 0.00 38.86 2.29
4137 5653 3.272574 ACTCATCGCTGAAATGGATGT 57.727 42.857 0.00 0.00 38.86 3.06
4138 5654 5.936686 ATTACTCATCGCTGAAATGGATG 57.063 39.130 0.00 0.00 39.07 3.51
4139 5655 6.238842 CCAAATTACTCATCGCTGAAATGGAT 60.239 38.462 0.00 0.00 0.00 3.41
4140 5656 5.066375 CCAAATTACTCATCGCTGAAATGGA 59.934 40.000 0.00 0.00 0.00 3.41
4141 5657 5.066375 TCCAAATTACTCATCGCTGAAATGG 59.934 40.000 0.00 0.00 0.00 3.16
4142 5658 6.122850 TCCAAATTACTCATCGCTGAAATG 57.877 37.500 0.00 0.00 0.00 2.32
4143 5659 6.555315 GTTCCAAATTACTCATCGCTGAAAT 58.445 36.000 0.00 0.00 0.00 2.17
4144 5660 5.390461 CGTTCCAAATTACTCATCGCTGAAA 60.390 40.000 0.00 0.00 0.00 2.69
4145 5661 4.092821 CGTTCCAAATTACTCATCGCTGAA 59.907 41.667 0.00 0.00 0.00 3.02
4146 5662 3.616821 CGTTCCAAATTACTCATCGCTGA 59.383 43.478 0.00 0.00 0.00 4.26
4147 5663 3.242413 CCGTTCCAAATTACTCATCGCTG 60.242 47.826 0.00 0.00 0.00 5.18
4148 5664 2.936498 CCGTTCCAAATTACTCATCGCT 59.064 45.455 0.00 0.00 0.00 4.93
4149 5665 2.933906 TCCGTTCCAAATTACTCATCGC 59.066 45.455 0.00 0.00 0.00 4.58
4150 5666 3.555956 CCTCCGTTCCAAATTACTCATCG 59.444 47.826 0.00 0.00 0.00 3.84
4151 5667 3.877508 CCCTCCGTTCCAAATTACTCATC 59.122 47.826 0.00 0.00 0.00 2.92
4152 5668 3.521937 TCCCTCCGTTCCAAATTACTCAT 59.478 43.478 0.00 0.00 0.00 2.90
4153 5669 2.907696 TCCCTCCGTTCCAAATTACTCA 59.092 45.455 0.00 0.00 0.00 3.41
4154 5670 3.055312 ACTCCCTCCGTTCCAAATTACTC 60.055 47.826 0.00 0.00 0.00 2.59
4155 5671 2.910977 ACTCCCTCCGTTCCAAATTACT 59.089 45.455 0.00 0.00 0.00 2.24
4156 5672 3.345508 ACTCCCTCCGTTCCAAATTAC 57.654 47.619 0.00 0.00 0.00 1.89
4157 5673 4.966805 AGATACTCCCTCCGTTCCAAATTA 59.033 41.667 0.00 0.00 0.00 1.40
4158 5674 3.780850 AGATACTCCCTCCGTTCCAAATT 59.219 43.478 0.00 0.00 0.00 1.82
4159 5675 3.134804 CAGATACTCCCTCCGTTCCAAAT 59.865 47.826 0.00 0.00 0.00 2.32
4160 5676 2.500098 CAGATACTCCCTCCGTTCCAAA 59.500 50.000 0.00 0.00 0.00 3.28
4161 5677 2.108168 CAGATACTCCCTCCGTTCCAA 58.892 52.381 0.00 0.00 0.00 3.53
4162 5678 1.006758 ACAGATACTCCCTCCGTTCCA 59.993 52.381 0.00 0.00 0.00 3.53
4163 5679 1.777941 ACAGATACTCCCTCCGTTCC 58.222 55.000 0.00 0.00 0.00 3.62
4164 5680 3.698040 TGTAACAGATACTCCCTCCGTTC 59.302 47.826 0.00 0.00 35.42 3.95
4165 5681 3.705051 TGTAACAGATACTCCCTCCGTT 58.295 45.455 0.00 0.00 35.42 4.44
4166 5682 3.377253 TGTAACAGATACTCCCTCCGT 57.623 47.619 0.00 0.00 35.42 4.69
4167 5683 3.952323 TCTTGTAACAGATACTCCCTCCG 59.048 47.826 0.00 0.00 35.42 4.63
4168 5684 5.278561 CGATCTTGTAACAGATACTCCCTCC 60.279 48.000 0.00 0.00 33.36 4.30
4169 5685 5.278561 CCGATCTTGTAACAGATACTCCCTC 60.279 48.000 0.00 0.00 33.36 4.30
4170 5686 4.585162 CCGATCTTGTAACAGATACTCCCT 59.415 45.833 0.00 0.00 33.36 4.20
4171 5687 4.796618 GCCGATCTTGTAACAGATACTCCC 60.797 50.000 0.00 0.00 33.36 4.30
4172 5688 4.038162 AGCCGATCTTGTAACAGATACTCC 59.962 45.833 0.00 0.00 33.36 3.85
4173 5689 4.979197 CAGCCGATCTTGTAACAGATACTC 59.021 45.833 0.00 0.00 33.36 2.59
4174 5690 4.202161 CCAGCCGATCTTGTAACAGATACT 60.202 45.833 0.00 0.00 33.36 2.12
4211 5727 4.108336 CAAGTCTCATGTGTGGATACTCG 58.892 47.826 0.00 0.00 37.61 4.18
4215 5731 3.865446 CAGCAAGTCTCATGTGTGGATA 58.135 45.455 0.00 0.00 0.00 2.59
4467 5990 1.523154 TTCCAAATGTGTCAGCGGCC 61.523 55.000 0.00 0.00 0.00 6.13
4505 6028 6.593770 CAGTGCACCATACATACAAGAAACTA 59.406 38.462 14.63 0.00 0.00 2.24
4506 6029 5.412594 CAGTGCACCATACATACAAGAAACT 59.587 40.000 14.63 0.00 0.00 2.66
4507 6030 5.411361 TCAGTGCACCATACATACAAGAAAC 59.589 40.000 14.63 0.00 0.00 2.78
4508 6031 5.555966 TCAGTGCACCATACATACAAGAAA 58.444 37.500 14.63 0.00 0.00 2.52
4509 6032 5.159273 TCAGTGCACCATACATACAAGAA 57.841 39.130 14.63 0.00 0.00 2.52
4510 6033 4.758688 CTCAGTGCACCATACATACAAGA 58.241 43.478 14.63 0.00 0.00 3.02
4513 6036 2.419990 GGCTCAGTGCACCATACATACA 60.420 50.000 14.63 0.00 45.15 2.29
4514 6037 2.213499 GGCTCAGTGCACCATACATAC 58.787 52.381 14.63 0.00 45.15 2.39
4515 6038 1.202521 CGGCTCAGTGCACCATACATA 60.203 52.381 14.63 0.00 45.15 2.29
4581 6354 1.533731 ACCATGTTTAAGTGAACGGCG 59.466 47.619 4.80 4.80 32.18 6.46
4585 6358 6.811253 TGGTCATACCATGTTTAAGTGAAC 57.189 37.500 0.00 0.00 44.79 3.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.