Multiple sequence alignment - TraesCS4A01G472700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G472700 chr4A 100.000 2654 0 0 1 2654 732790402 732787749 0.000000e+00 4902.0
1 TraesCS4A01G472700 chr4A 96.089 179 6 1 199 377 620940055 620939878 9.290000e-75 291.0
2 TraesCS4A01G472700 chr7A 91.528 1440 60 25 376 1772 8404942 8403522 0.000000e+00 1927.0
3 TraesCS4A01G472700 chr7A 91.528 1440 60 25 376 1772 8411754 8410334 0.000000e+00 1927.0
4 TraesCS4A01G472700 chr7A 95.228 482 23 0 1764 2245 14464039 14463558 0.000000e+00 763.0
5 TraesCS4A01G472700 chr7A 81.698 754 85 38 868 1605 657154953 657155669 1.770000e-161 579.0
6 TraesCS4A01G472700 chr7A 91.436 362 31 0 2240 2601 8403531 8403170 5.100000e-137 497.0
7 TraesCS4A01G472700 chr7A 91.436 362 31 0 2240 2601 8410343 8409982 5.100000e-137 497.0
8 TraesCS4A01G472700 chr7A 91.705 217 17 1 1 216 8405155 8404939 1.540000e-77 300.0
9 TraesCS4A01G472700 chr7A 91.705 217 17 1 1 216 8411967 8411751 1.540000e-77 300.0
10 TraesCS4A01G472700 chr7D 92.285 1335 56 13 376 1670 7466771 7465444 0.000000e+00 1851.0
11 TraesCS4A01G472700 chr7D 81.457 755 85 38 868 1605 568419667 568420383 3.830000e-158 568.0
12 TraesCS4A01G472700 chr7D 90.786 369 32 2 2287 2654 7465436 7465069 2.370000e-135 492.0
13 TraesCS4A01G472700 chr7D 81.495 562 80 13 1153 1706 7458511 7457966 8.720000e-120 440.0
14 TraesCS4A01G472700 chr7D 91.364 220 15 1 1 216 7466987 7466768 5.550000e-77 298.0
15 TraesCS4A01G472700 chr7D 77.551 245 34 14 1110 1354 10507704 10507927 7.710000e-26 128.0
16 TraesCS4A01G472700 chr7D 76.016 246 39 8 523 752 7462894 7462653 2.790000e-20 110.0
17 TraesCS4A01G472700 chr7D 91.667 72 6 0 681 752 7458986 7458915 1.680000e-17 100.0
18 TraesCS4A01G472700 chr7D 100.000 28 0 0 2388 2415 271285450 271285423 5.000000e-03 52.8
19 TraesCS4A01G472700 chrUn 97.002 467 12 1 1773 2239 41505480 41505944 0.000000e+00 784.0
20 TraesCS4A01G472700 chr5B 96.788 467 15 0 1773 2239 684218238 684217772 0.000000e+00 780.0
21 TraesCS4A01G472700 chr5B 95.949 469 17 1 1771 2239 711883414 711882948 0.000000e+00 760.0
22 TraesCS4A01G472700 chr5B 95.339 472 19 1 1770 2241 603950676 603950208 0.000000e+00 747.0
23 TraesCS4A01G472700 chr1B 96.178 471 18 0 1771 2241 316597813 316597343 0.000000e+00 771.0
24 TraesCS4A01G472700 chr1B 95.717 467 18 2 1775 2240 29395098 29394633 0.000000e+00 750.0
25 TraesCS4A01G472700 chr3A 95.717 467 19 1 1773 2239 191007112 191006647 0.000000e+00 750.0
26 TraesCS4A01G472700 chr3A 97.143 175 5 0 207 381 744920941 744921115 2.000000e-76 296.0
27 TraesCS4A01G472700 chr3A 75.884 311 53 17 1111 1416 482184062 482183769 3.560000e-29 139.0
28 TraesCS4A01G472700 chr7B 95.137 473 21 1 1768 2240 740239660 740239190 0.000000e+00 745.0
29 TraesCS4A01G472700 chr7B 83.929 616 61 21 997 1605 624246332 624246916 2.980000e-154 555.0
30 TraesCS4A01G472700 chr7B 93.182 44 3 0 1565 1608 624791144 624791187 6.130000e-07 65.8
31 TraesCS4A01G472700 chr7B 96.774 31 1 0 2385 2415 269803519 269803549 5.000000e-03 52.8
32 TraesCS4A01G472700 chr2D 99.401 167 1 0 211 377 426427799 426427965 1.190000e-78 303.0
33 TraesCS4A01G472700 chr6A 98.235 170 3 0 209 378 153669880 153669711 5.550000e-77 298.0
34 TraesCS4A01G472700 chr6A 78.896 308 35 22 1114 1415 482620188 482619905 5.840000e-42 182.0
35 TraesCS4A01G472700 chr2B 97.701 174 3 1 213 386 342280943 342280771 5.550000e-77 298.0
36 TraesCS4A01G472700 chr2B 98.182 165 3 0 213 377 719520505 719520669 3.340000e-74 289.0
37 TraesCS4A01G472700 chr1D 98.246 171 2 1 210 380 360358221 360358390 5.550000e-77 298.0
38 TraesCS4A01G472700 chr1D 98.788 165 2 0 213 377 178466306 178466470 7.180000e-76 294.0
39 TraesCS4A01G472700 chr3B 96.111 180 6 1 198 377 62970109 62969931 2.580000e-75 292.0
40 TraesCS4A01G472700 chr6D 78.689 305 38 19 1114 1415 342472966 342472686 7.550000e-41 178.0
41 TraesCS4A01G472700 chr3D 77.255 255 40 12 1111 1362 362069956 362069717 1.660000e-27 134.0
42 TraesCS4A01G472700 chr1A 100.000 28 0 0 2388 2415 555545027 555545000 5.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G472700 chr4A 732787749 732790402 2653 True 4902.0 4902 100.000000 1 2654 1 chr4A.!!$R2 2653
1 TraesCS4A01G472700 chr7A 8403170 8405155 1985 True 908.0 1927 91.556333 1 2601 3 chr7A.!!$R2 2600
2 TraesCS4A01G472700 chr7A 8409982 8411967 1985 True 908.0 1927 91.556333 1 2601 3 chr7A.!!$R3 2600
3 TraesCS4A01G472700 chr7A 657154953 657155669 716 False 579.0 579 81.698000 868 1605 1 chr7A.!!$F1 737
4 TraesCS4A01G472700 chr7D 568419667 568420383 716 False 568.0 568 81.457000 868 1605 1 chr7D.!!$F2 737
5 TraesCS4A01G472700 chr7D 7457966 7466987 9021 True 548.5 1851 87.268833 1 2654 6 chr7D.!!$R2 2653
6 TraesCS4A01G472700 chr7B 624246332 624246916 584 False 555.0 555 83.929000 997 1605 1 chr7B.!!$F2 608

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
221 227 0.105453 TCCTGGCATCTACTCCCTCC 60.105 60.0 0.0 0.0 0.0 4.3 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2156 2248 0.033504 AAGATCGGTGCGACACAACT 59.966 50.0 11.2 3.29 39.18 3.16 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
35 36 9.769093 CAACAAACTAAGTAATATACACAAGGC 57.231 33.333 0.00 0.00 0.00 4.35
46 47 1.103398 ACACAAGGCACCAGCTCAAC 61.103 55.000 0.00 0.00 41.70 3.18
63 64 4.489810 CTCAACAACAGCTAGTCCTAGTG 58.510 47.826 3.45 3.64 35.65 2.74
68 69 5.298347 ACAACAGCTAGTCCTAGTGTTTTC 58.702 41.667 14.26 0.00 36.37 2.29
81 82 9.118300 GTCCTAGTGTTTTCTACTGCTACTATA 57.882 37.037 0.00 0.00 0.00 1.31
83 84 9.953697 CCTAGTGTTTTCTACTGCTACTATAAG 57.046 37.037 0.00 0.00 0.00 1.73
130 136 3.589951 ACAGCTTGCATCCCATCTAAT 57.410 42.857 0.00 0.00 0.00 1.73
134 140 6.073314 ACAGCTTGCATCCCATCTAATTAAT 58.927 36.000 0.00 0.00 0.00 1.40
216 222 8.585881 TGTTAAATATACTCCTGGCATCTACTC 58.414 37.037 0.00 0.00 0.00 2.59
217 223 6.613153 AAATATACTCCTGGCATCTACTCC 57.387 41.667 0.00 0.00 0.00 3.85
218 224 2.383442 TACTCCTGGCATCTACTCCC 57.617 55.000 0.00 0.00 0.00 4.30
219 225 0.639392 ACTCCTGGCATCTACTCCCT 59.361 55.000 0.00 0.00 0.00 4.20
220 226 1.337118 CTCCTGGCATCTACTCCCTC 58.663 60.000 0.00 0.00 0.00 4.30
221 227 0.105453 TCCTGGCATCTACTCCCTCC 60.105 60.000 0.00 0.00 0.00 4.30
222 228 1.467678 CCTGGCATCTACTCCCTCCG 61.468 65.000 0.00 0.00 0.00 4.63
223 229 0.757188 CTGGCATCTACTCCCTCCGT 60.757 60.000 0.00 0.00 0.00 4.69
224 230 0.325296 TGGCATCTACTCCCTCCGTT 60.325 55.000 0.00 0.00 0.00 4.44
225 231 0.389757 GGCATCTACTCCCTCCGTTC 59.610 60.000 0.00 0.00 0.00 3.95
226 232 0.389757 GCATCTACTCCCTCCGTTCC 59.610 60.000 0.00 0.00 0.00 3.62
227 233 2.030045 GCATCTACTCCCTCCGTTCCT 61.030 57.143 0.00 0.00 0.00 3.36
228 234 2.752154 GCATCTACTCCCTCCGTTCCTA 60.752 54.545 0.00 0.00 0.00 2.94
229 235 3.563223 CATCTACTCCCTCCGTTCCTAA 58.437 50.000 0.00 0.00 0.00 2.69
230 236 3.744940 TCTACTCCCTCCGTTCCTAAA 57.255 47.619 0.00 0.00 0.00 1.85
231 237 4.261411 TCTACTCCCTCCGTTCCTAAAT 57.739 45.455 0.00 0.00 0.00 1.40
232 238 5.393068 TCTACTCCCTCCGTTCCTAAATA 57.607 43.478 0.00 0.00 0.00 1.40
233 239 5.961897 TCTACTCCCTCCGTTCCTAAATAT 58.038 41.667 0.00 0.00 0.00 1.28
234 240 6.379579 TCTACTCCCTCCGTTCCTAAATATT 58.620 40.000 0.00 0.00 0.00 1.28
235 241 5.970501 ACTCCCTCCGTTCCTAAATATTT 57.029 39.130 5.89 5.89 0.00 1.40
236 242 5.681639 ACTCCCTCCGTTCCTAAATATTTG 58.318 41.667 11.05 1.40 0.00 2.32
237 243 5.191124 ACTCCCTCCGTTCCTAAATATTTGT 59.809 40.000 11.05 0.00 0.00 2.83
238 244 5.677567 TCCCTCCGTTCCTAAATATTTGTC 58.322 41.667 11.05 0.00 0.00 3.18
239 245 5.427481 TCCCTCCGTTCCTAAATATTTGTCT 59.573 40.000 11.05 0.00 0.00 3.41
240 246 6.069847 TCCCTCCGTTCCTAAATATTTGTCTT 60.070 38.462 11.05 0.00 0.00 3.01
241 247 6.602009 CCCTCCGTTCCTAAATATTTGTCTTT 59.398 38.462 11.05 0.00 0.00 2.52
242 248 7.122204 CCCTCCGTTCCTAAATATTTGTCTTTT 59.878 37.037 11.05 0.00 0.00 2.27
243 249 8.520351 CCTCCGTTCCTAAATATTTGTCTTTTT 58.480 33.333 11.05 0.00 0.00 1.94
260 266 9.965824 TTGTCTTTTTAGAGATTTCAAATGGAC 57.034 29.630 0.00 0.00 0.00 4.02
261 267 9.354673 TGTCTTTTTAGAGATTTCAAATGGACT 57.645 29.630 0.00 0.00 0.00 3.85
277 283 3.900971 TGGACTACCACATACGGATGTA 58.099 45.455 14.23 0.00 44.82 2.29
278 284 4.476297 TGGACTACCACATACGGATGTAT 58.524 43.478 14.23 7.46 44.82 2.29
279 285 5.633117 TGGACTACCACATACGGATGTATA 58.367 41.667 14.23 8.27 44.82 1.47
280 286 6.250711 TGGACTACCACATACGGATGTATAT 58.749 40.000 14.23 4.37 44.82 0.86
281 287 7.404481 TGGACTACCACATACGGATGTATATA 58.596 38.462 14.23 5.36 44.82 0.86
282 288 7.555195 TGGACTACCACATACGGATGTATATAG 59.445 40.741 14.23 16.35 44.82 1.31
283 289 7.772292 GGACTACCACATACGGATGTATATAGA 59.228 40.741 22.62 5.04 44.82 1.98
284 290 8.503458 ACTACCACATACGGATGTATATAGAC 57.497 38.462 22.62 0.00 44.82 2.59
285 291 8.105197 ACTACCACATACGGATGTATATAGACA 58.895 37.037 22.62 2.07 44.82 3.41
286 292 7.956328 ACCACATACGGATGTATATAGACAT 57.044 36.000 14.23 12.70 44.82 3.06
288 294 9.642343 ACCACATACGGATGTATATAGACATAT 57.358 33.333 14.23 5.08 44.82 1.78
317 323 6.734104 AGTGTAGATTCACTCATTTTGCTC 57.266 37.500 0.00 0.00 44.07 4.26
318 324 5.645497 AGTGTAGATTCACTCATTTTGCTCC 59.355 40.000 0.00 0.00 44.07 4.70
319 325 4.631377 TGTAGATTCACTCATTTTGCTCCG 59.369 41.667 0.00 0.00 0.00 4.63
320 326 3.679389 AGATTCACTCATTTTGCTCCGT 58.321 40.909 0.00 0.00 0.00 4.69
321 327 4.832248 AGATTCACTCATTTTGCTCCGTA 58.168 39.130 0.00 0.00 0.00 4.02
322 328 5.431765 AGATTCACTCATTTTGCTCCGTAT 58.568 37.500 0.00 0.00 0.00 3.06
323 329 4.944962 TTCACTCATTTTGCTCCGTATG 57.055 40.909 0.00 0.00 0.00 2.39
324 330 3.937814 TCACTCATTTTGCTCCGTATGT 58.062 40.909 0.00 0.00 0.00 2.29
325 331 5.079689 TCACTCATTTTGCTCCGTATGTA 57.920 39.130 0.00 0.00 0.00 2.29
326 332 5.109210 TCACTCATTTTGCTCCGTATGTAG 58.891 41.667 0.00 0.00 0.00 2.74
327 333 4.870426 CACTCATTTTGCTCCGTATGTAGT 59.130 41.667 0.00 0.00 0.00 2.73
328 334 5.005779 CACTCATTTTGCTCCGTATGTAGTC 59.994 44.000 0.00 0.00 0.00 2.59
329 335 5.079689 TCATTTTGCTCCGTATGTAGTCA 57.920 39.130 0.00 0.00 0.00 3.41
330 336 4.868171 TCATTTTGCTCCGTATGTAGTCAC 59.132 41.667 0.00 0.00 0.00 3.67
331 337 4.530710 TTTTGCTCCGTATGTAGTCACT 57.469 40.909 0.00 0.00 0.00 3.41
332 338 4.530710 TTTGCTCCGTATGTAGTCACTT 57.469 40.909 0.00 0.00 0.00 3.16
333 339 3.503827 TGCTCCGTATGTAGTCACTTG 57.496 47.619 0.00 0.00 0.00 3.16
334 340 2.823747 TGCTCCGTATGTAGTCACTTGT 59.176 45.455 0.00 0.00 0.00 3.16
335 341 3.257375 TGCTCCGTATGTAGTCACTTGTT 59.743 43.478 0.00 0.00 0.00 2.83
336 342 3.612860 GCTCCGTATGTAGTCACTTGTTG 59.387 47.826 0.00 0.00 0.00 3.33
337 343 4.617530 GCTCCGTATGTAGTCACTTGTTGA 60.618 45.833 0.00 0.00 0.00 3.18
338 344 5.456548 TCCGTATGTAGTCACTTGTTGAA 57.543 39.130 0.00 0.00 35.39 2.69
339 345 5.845103 TCCGTATGTAGTCACTTGTTGAAA 58.155 37.500 0.00 0.00 35.39 2.69
340 346 6.460781 TCCGTATGTAGTCACTTGTTGAAAT 58.539 36.000 0.00 0.00 35.39 2.17
341 347 6.588756 TCCGTATGTAGTCACTTGTTGAAATC 59.411 38.462 0.00 0.00 35.39 2.17
342 348 6.590292 CCGTATGTAGTCACTTGTTGAAATCT 59.410 38.462 0.00 0.00 35.39 2.40
343 349 7.201444 CCGTATGTAGTCACTTGTTGAAATCTC 60.201 40.741 0.00 0.00 35.39 2.75
344 350 7.542477 CGTATGTAGTCACTTGTTGAAATCTCT 59.458 37.037 0.00 0.00 35.39 3.10
345 351 9.856488 GTATGTAGTCACTTGTTGAAATCTCTA 57.144 33.333 0.00 0.00 35.39 2.43
346 352 8.994429 ATGTAGTCACTTGTTGAAATCTCTAG 57.006 34.615 0.00 0.00 35.39 2.43
347 353 8.178313 TGTAGTCACTTGTTGAAATCTCTAGA 57.822 34.615 0.00 0.00 35.39 2.43
348 354 8.638873 TGTAGTCACTTGTTGAAATCTCTAGAA 58.361 33.333 0.00 0.00 35.39 2.10
349 355 9.134734 GTAGTCACTTGTTGAAATCTCTAGAAG 57.865 37.037 0.00 0.00 35.39 2.85
350 356 7.158021 AGTCACTTGTTGAAATCTCTAGAAGG 58.842 38.462 0.00 0.00 35.39 3.46
351 357 7.015682 AGTCACTTGTTGAAATCTCTAGAAGGA 59.984 37.037 0.00 0.00 35.39 3.36
352 358 7.117092 GTCACTTGTTGAAATCTCTAGAAGGAC 59.883 40.741 0.00 0.00 35.39 3.85
353 359 6.931281 CACTTGTTGAAATCTCTAGAAGGACA 59.069 38.462 0.00 0.00 33.74 4.02
354 360 7.442364 CACTTGTTGAAATCTCTAGAAGGACAA 59.558 37.037 0.00 0.00 33.74 3.18
355 361 7.993183 ACTTGTTGAAATCTCTAGAAGGACAAA 59.007 33.333 0.00 0.00 33.74 2.83
356 362 8.924511 TTGTTGAAATCTCTAGAAGGACAAAT 57.075 30.769 0.00 0.00 0.00 2.32
371 377 8.049721 AGAAGGACAAATATTTAGGAACAGAGG 58.950 37.037 0.00 0.00 0.00 3.69
372 378 6.663734 AGGACAAATATTTAGGAACAGAGGG 58.336 40.000 0.00 0.00 0.00 4.30
373 379 6.447084 AGGACAAATATTTAGGAACAGAGGGA 59.553 38.462 0.00 0.00 0.00 4.20
374 380 6.768381 GGACAAATATTTAGGAACAGAGGGAG 59.232 42.308 0.00 0.00 0.00 4.30
375 381 7.272144 ACAAATATTTAGGAACAGAGGGAGT 57.728 36.000 0.00 0.00 0.00 3.85
376 382 8.388656 ACAAATATTTAGGAACAGAGGGAGTA 57.611 34.615 0.00 0.00 0.00 2.59
377 383 8.265764 ACAAATATTTAGGAACAGAGGGAGTAC 58.734 37.037 0.00 0.00 0.00 2.73
378 384 8.487028 CAAATATTTAGGAACAGAGGGAGTACT 58.513 37.037 0.00 0.00 0.00 2.73
388 394 3.989167 CAGAGGGAGTACTACGTCTATCG 59.011 52.174 25.99 13.14 36.59 2.92
389 395 3.894427 AGAGGGAGTACTACGTCTATCGA 59.106 47.826 25.45 0.00 36.93 3.59
417 423 6.923012 TGTCGTTTACCAGTGTTATTAGCTA 58.077 36.000 0.00 0.00 0.00 3.32
463 472 6.312399 TGTGGCAGAGTTAATTTTACTGTG 57.688 37.500 7.99 7.99 39.25 3.66
481 490 2.637382 TGTGAATAGCAGTTGACCTCCA 59.363 45.455 0.00 0.00 0.00 3.86
485 494 5.525378 GTGAATAGCAGTTGACCTCCATAAG 59.475 44.000 0.00 0.00 0.00 1.73
579 588 6.263617 TGGCTTAACTACTTGGTTTAACTTGG 59.736 38.462 0.00 0.00 0.00 3.61
658 668 6.114221 TGTTGTCGGTTTCTTCTGTAAAAG 57.886 37.500 0.00 0.00 0.00 2.27
795 819 1.463674 AAGGATGCATTTGGACCGTC 58.536 50.000 0.00 0.00 0.00 4.79
822 846 3.372206 CGAAGAATCAACGGCTGAGATTT 59.628 43.478 15.58 5.01 37.52 2.17
863 887 1.472276 GCATACGGAGAGTCAACGCG 61.472 60.000 3.53 3.53 0.00 6.01
915 940 2.926778 AGATCCCATGCTTGCTACTC 57.073 50.000 0.00 0.00 0.00 2.59
916 941 2.406559 AGATCCCATGCTTGCTACTCT 58.593 47.619 0.00 0.00 0.00 3.24
968 999 9.447040 CACTTATGCATCATAATTCAGAACAAG 57.553 33.333 0.19 0.00 36.03 3.16
969 1000 9.399797 ACTTATGCATCATAATTCAGAACAAGA 57.600 29.630 0.19 0.00 36.03 3.02
1037 1095 4.173924 GGAGAGCAGAGGGGCAGC 62.174 72.222 0.00 0.00 35.83 5.25
1069 1130 2.124693 GGAGGAGGAGTCGAGCTGG 61.125 68.421 0.00 0.00 0.00 4.85
1109 1185 2.481854 CAATGGCGAAGAGAGGATCAG 58.518 52.381 0.00 0.00 37.82 2.90
1734 1826 3.356529 AATCAACGCAAGAAGGGATCT 57.643 42.857 0.00 0.00 41.32 2.75
1754 1846 8.133627 GGGATCTTGTCATCACAAAATAAGATG 58.866 37.037 0.00 0.00 42.13 2.90
1765 1857 9.643693 ATCACAAAATAAGATGAAATTGTGTCC 57.356 29.630 13.98 0.00 44.74 4.02
1766 1858 8.637099 TCACAAAATAAGATGAAATTGTGTCCA 58.363 29.630 13.98 0.00 44.74 4.02
1767 1859 9.426837 CACAAAATAAGATGAAATTGTGTCCAT 57.573 29.630 7.97 0.00 41.46 3.41
1768 1860 9.426837 ACAAAATAAGATGAAATTGTGTCCATG 57.573 29.630 0.00 0.00 29.38 3.66
1769 1861 9.426837 CAAAATAAGATGAAATTGTGTCCATGT 57.573 29.630 0.00 0.00 0.00 3.21
1772 1864 5.824904 AGATGAAATTGTGTCCATGTAGC 57.175 39.130 0.00 0.00 0.00 3.58
1773 1865 4.333649 AGATGAAATTGTGTCCATGTAGCG 59.666 41.667 0.00 0.00 0.00 4.26
1774 1866 3.669536 TGAAATTGTGTCCATGTAGCGA 58.330 40.909 0.00 0.00 0.00 4.93
1775 1867 4.068599 TGAAATTGTGTCCATGTAGCGAA 58.931 39.130 0.00 0.00 0.00 4.70
1776 1868 4.517075 TGAAATTGTGTCCATGTAGCGAAA 59.483 37.500 0.00 0.00 0.00 3.46
1777 1869 5.009110 TGAAATTGTGTCCATGTAGCGAAAA 59.991 36.000 0.00 0.00 0.00 2.29
1778 1870 5.643379 AATTGTGTCCATGTAGCGAAAAT 57.357 34.783 0.00 0.00 0.00 1.82
1779 1871 6.751514 AATTGTGTCCATGTAGCGAAAATA 57.248 33.333 0.00 0.00 0.00 1.40
1780 1872 6.942532 ATTGTGTCCATGTAGCGAAAATAT 57.057 33.333 0.00 0.00 0.00 1.28
1781 1873 8.445275 AATTGTGTCCATGTAGCGAAAATATA 57.555 30.769 0.00 0.00 0.00 0.86
1782 1874 8.621532 ATTGTGTCCATGTAGCGAAAATATAT 57.378 30.769 0.00 0.00 0.00 0.86
1783 1875 9.719355 ATTGTGTCCATGTAGCGAAAATATATA 57.281 29.630 0.00 0.00 0.00 0.86
1784 1876 9.719355 TTGTGTCCATGTAGCGAAAATATATAT 57.281 29.630 0.00 0.00 0.00 0.86
1785 1877 9.719355 TGTGTCCATGTAGCGAAAATATATATT 57.281 29.630 1.91 1.91 0.00 1.28
1796 1888 8.607459 AGCGAAAATATATATTAGAGCACATGC 58.393 33.333 20.93 0.00 42.49 4.06
1797 1889 8.390354 GCGAAAATATATATTAGAGCACATGCA 58.610 33.333 8.39 0.00 45.16 3.96
1798 1890 9.694520 CGAAAATATATATTAGAGCACATGCAC 57.305 33.333 8.39 0.00 45.16 4.57
1799 1891 9.994432 GAAAATATATATTAGAGCACATGCACC 57.006 33.333 8.39 0.00 45.16 5.01
1800 1892 8.511604 AAATATATATTAGAGCACATGCACCC 57.488 34.615 8.39 0.00 45.16 4.61
1801 1893 3.862877 ATATTAGAGCACATGCACCCA 57.137 42.857 6.64 0.00 45.16 4.51
1802 1894 2.048444 ATTAGAGCACATGCACCCAG 57.952 50.000 6.64 0.00 45.16 4.45
1803 1895 0.035152 TTAGAGCACATGCACCCAGG 60.035 55.000 6.64 0.00 45.16 4.45
1804 1896 2.541547 TAGAGCACATGCACCCAGGC 62.542 60.000 6.64 0.00 45.16 4.85
1807 1899 4.371417 CACATGCACCCAGGCCCT 62.371 66.667 0.00 0.00 0.00 5.19
1808 1900 4.052518 ACATGCACCCAGGCCCTC 62.053 66.667 0.00 0.00 0.00 4.30
1809 1901 3.736224 CATGCACCCAGGCCCTCT 61.736 66.667 0.00 0.00 0.00 3.69
1810 1902 3.415087 ATGCACCCAGGCCCTCTC 61.415 66.667 0.00 0.00 0.00 3.20
1811 1903 3.958629 ATGCACCCAGGCCCTCTCT 62.959 63.158 0.00 0.00 0.00 3.10
1812 1904 2.365635 GCACCCAGGCCCTCTCTA 60.366 66.667 0.00 0.00 0.00 2.43
1813 1905 1.768077 GCACCCAGGCCCTCTCTAT 60.768 63.158 0.00 0.00 0.00 1.98
1814 1906 1.763546 GCACCCAGGCCCTCTCTATC 61.764 65.000 0.00 0.00 0.00 2.08
1815 1907 0.105246 CACCCAGGCCCTCTCTATCT 60.105 60.000 0.00 0.00 0.00 1.98
1816 1908 1.148027 CACCCAGGCCCTCTCTATCTA 59.852 57.143 0.00 0.00 0.00 1.98
1817 1909 1.431243 ACCCAGGCCCTCTCTATCTAG 59.569 57.143 0.00 0.00 0.00 2.43
1818 1910 1.555967 CCAGGCCCTCTCTATCTAGC 58.444 60.000 0.00 0.00 0.00 3.42
1819 1911 1.555967 CAGGCCCTCTCTATCTAGCC 58.444 60.000 0.00 0.00 40.79 3.93
1820 1912 1.162505 AGGCCCTCTCTATCTAGCCA 58.837 55.000 0.00 0.00 42.97 4.75
1821 1913 1.721691 AGGCCCTCTCTATCTAGCCAT 59.278 52.381 0.00 0.00 42.97 4.40
1822 1914 2.107366 GGCCCTCTCTATCTAGCCATC 58.893 57.143 0.00 0.00 40.20 3.51
1823 1915 2.107366 GCCCTCTCTATCTAGCCATCC 58.893 57.143 0.00 0.00 0.00 3.51
1824 1916 2.558575 GCCCTCTCTATCTAGCCATCCA 60.559 54.545 0.00 0.00 0.00 3.41
1825 1917 3.885333 GCCCTCTCTATCTAGCCATCCAT 60.885 52.174 0.00 0.00 0.00 3.41
1826 1918 4.360889 CCCTCTCTATCTAGCCATCCATT 58.639 47.826 0.00 0.00 0.00 3.16
1827 1919 4.782156 CCCTCTCTATCTAGCCATCCATTT 59.218 45.833 0.00 0.00 0.00 2.32
1828 1920 5.104982 CCCTCTCTATCTAGCCATCCATTTC 60.105 48.000 0.00 0.00 0.00 2.17
1829 1921 5.104982 CCTCTCTATCTAGCCATCCATTTCC 60.105 48.000 0.00 0.00 0.00 3.13
1830 1922 5.659503 TCTCTATCTAGCCATCCATTTCCT 58.340 41.667 0.00 0.00 0.00 3.36
1831 1923 5.483231 TCTCTATCTAGCCATCCATTTCCTG 59.517 44.000 0.00 0.00 0.00 3.86
1832 1924 2.645838 TCTAGCCATCCATTTCCTGC 57.354 50.000 0.00 0.00 0.00 4.85
1833 1925 2.130193 TCTAGCCATCCATTTCCTGCT 58.870 47.619 0.00 0.00 0.00 4.24
1834 1926 2.511218 TCTAGCCATCCATTTCCTGCTT 59.489 45.455 0.00 0.00 0.00 3.91
1835 1927 2.242882 AGCCATCCATTTCCTGCTTT 57.757 45.000 0.00 0.00 0.00 3.51
1836 1928 3.386932 AGCCATCCATTTCCTGCTTTA 57.613 42.857 0.00 0.00 0.00 1.85
1837 1929 3.711863 AGCCATCCATTTCCTGCTTTAA 58.288 40.909 0.00 0.00 0.00 1.52
1838 1930 3.703052 AGCCATCCATTTCCTGCTTTAAG 59.297 43.478 0.00 0.00 0.00 1.85
1839 1931 3.701040 GCCATCCATTTCCTGCTTTAAGA 59.299 43.478 0.00 0.00 0.00 2.10
1840 1932 4.343239 GCCATCCATTTCCTGCTTTAAGAT 59.657 41.667 0.00 0.00 0.00 2.40
1841 1933 5.163374 GCCATCCATTTCCTGCTTTAAGATT 60.163 40.000 0.00 0.00 0.00 2.40
1842 1934 6.631088 GCCATCCATTTCCTGCTTTAAGATTT 60.631 38.462 0.00 0.00 0.00 2.17
1843 1935 6.759827 CCATCCATTTCCTGCTTTAAGATTTG 59.240 38.462 0.00 0.00 0.00 2.32
1844 1936 6.916360 TCCATTTCCTGCTTTAAGATTTGT 57.084 33.333 0.00 0.00 0.00 2.83
1845 1937 6.690530 TCCATTTCCTGCTTTAAGATTTGTG 58.309 36.000 0.00 0.00 0.00 3.33
1846 1938 6.267471 TCCATTTCCTGCTTTAAGATTTGTGT 59.733 34.615 0.00 0.00 0.00 3.72
1847 1939 7.450014 TCCATTTCCTGCTTTAAGATTTGTGTA 59.550 33.333 0.00 0.00 0.00 2.90
1848 1940 8.087750 CCATTTCCTGCTTTAAGATTTGTGTAA 58.912 33.333 0.00 0.00 0.00 2.41
1849 1941 9.474920 CATTTCCTGCTTTAAGATTTGTGTAAA 57.525 29.630 0.00 0.00 0.00 2.01
1853 1945 9.290988 TCCTGCTTTAAGATTTGTGTAAATACA 57.709 29.630 0.00 0.00 36.66 2.29
1911 2003 7.416154 TCTTGAAGTTCAAACCTATACAACG 57.584 36.000 18.55 3.69 35.73 4.10
1912 2004 6.987992 TCTTGAAGTTCAAACCTATACAACGT 59.012 34.615 18.55 0.00 35.73 3.99
1913 2005 6.533819 TGAAGTTCAAACCTATACAACGTG 57.466 37.500 2.20 0.00 0.00 4.49
1914 2006 6.282167 TGAAGTTCAAACCTATACAACGTGA 58.718 36.000 2.20 0.00 0.00 4.35
1915 2007 6.201425 TGAAGTTCAAACCTATACAACGTGAC 59.799 38.462 2.20 0.00 0.00 3.67
1916 2008 5.603596 AGTTCAAACCTATACAACGTGACA 58.396 37.500 0.00 0.00 0.00 3.58
1917 2009 6.050432 AGTTCAAACCTATACAACGTGACAA 58.950 36.000 0.00 0.00 0.00 3.18
1918 2010 6.539464 AGTTCAAACCTATACAACGTGACAAA 59.461 34.615 0.00 0.00 0.00 2.83
1919 2011 6.533819 TCAAACCTATACAACGTGACAAAG 57.466 37.500 0.00 0.00 0.00 2.77
1920 2012 5.049954 TCAAACCTATACAACGTGACAAAGC 60.050 40.000 0.00 0.00 0.00 3.51
1921 2013 4.267349 ACCTATACAACGTGACAAAGCT 57.733 40.909 0.00 0.00 0.00 3.74
1922 2014 4.638304 ACCTATACAACGTGACAAAGCTT 58.362 39.130 0.00 0.00 0.00 3.74
1923 2015 5.061179 ACCTATACAACGTGACAAAGCTTT 58.939 37.500 5.69 5.69 0.00 3.51
1924 2016 5.178809 ACCTATACAACGTGACAAAGCTTTC 59.821 40.000 9.23 0.00 0.00 2.62
1925 2017 5.408604 CCTATACAACGTGACAAAGCTTTCT 59.591 40.000 9.23 0.00 0.00 2.52
1926 2018 3.405170 ACAACGTGACAAAGCTTTCTG 57.595 42.857 9.23 2.17 0.00 3.02
1927 2019 3.006940 ACAACGTGACAAAGCTTTCTGA 58.993 40.909 9.23 0.00 0.00 3.27
1928 2020 3.063997 ACAACGTGACAAAGCTTTCTGAG 59.936 43.478 9.23 0.21 0.00 3.35
1929 2021 2.906354 ACGTGACAAAGCTTTCTGAGT 58.094 42.857 9.23 3.96 0.00 3.41
1930 2022 4.054780 ACGTGACAAAGCTTTCTGAGTA 57.945 40.909 9.23 0.00 0.00 2.59
1931 2023 4.051922 ACGTGACAAAGCTTTCTGAGTAG 58.948 43.478 9.23 0.00 0.00 2.57
1932 2024 4.202121 ACGTGACAAAGCTTTCTGAGTAGA 60.202 41.667 9.23 0.00 0.00 2.59
1933 2025 4.745125 CGTGACAAAGCTTTCTGAGTAGAA 59.255 41.667 9.23 0.00 41.06 2.10
1934 2026 5.406780 CGTGACAAAGCTTTCTGAGTAGAAT 59.593 40.000 9.23 0.00 42.25 2.40
1935 2027 6.400515 CGTGACAAAGCTTTCTGAGTAGAATC 60.401 42.308 9.23 0.00 42.25 2.52
1936 2028 6.648725 GTGACAAAGCTTTCTGAGTAGAATCT 59.351 38.462 9.23 0.00 42.25 2.40
1937 2029 7.815068 GTGACAAAGCTTTCTGAGTAGAATCTA 59.185 37.037 9.23 0.00 42.25 1.98
1938 2030 8.031864 TGACAAAGCTTTCTGAGTAGAATCTAG 58.968 37.037 9.23 0.00 42.25 2.43
1939 2031 7.327214 ACAAAGCTTTCTGAGTAGAATCTAGG 58.673 38.462 9.23 0.00 42.25 3.02
1940 2032 7.179338 ACAAAGCTTTCTGAGTAGAATCTAGGA 59.821 37.037 9.23 0.00 42.25 2.94
1941 2033 7.912778 AAGCTTTCTGAGTAGAATCTAGGAT 57.087 36.000 0.00 0.00 42.25 3.24
1942 2034 9.427821 AAAGCTTTCTGAGTAGAATCTAGGATA 57.572 33.333 5.69 0.00 42.25 2.59
1943 2035 9.427821 AAGCTTTCTGAGTAGAATCTAGGATAA 57.572 33.333 0.00 0.00 42.25 1.75
1944 2036 9.427821 AGCTTTCTGAGTAGAATCTAGGATAAA 57.572 33.333 0.00 0.00 42.25 1.40
1948 2040 9.575868 TTCTGAGTAGAATCTAGGATAAATCGT 57.424 33.333 0.00 0.00 37.99 3.73
1951 2043 9.788889 TGAGTAGAATCTAGGATAAATCGTACA 57.211 33.333 0.00 0.00 0.00 2.90
2032 2124 9.800433 TCATATTTTTAGTATTTACGTCGGACA 57.200 29.630 9.10 0.00 0.00 4.02
2078 2170 7.982354 TCCTAGATTCTAGTTAGAAAGCTTTGC 59.018 37.037 18.30 8.41 44.63 3.68
2079 2171 6.993786 AGATTCTAGTTAGAAAGCTTTGCC 57.006 37.500 18.30 2.73 44.63 4.52
2080 2172 6.476378 AGATTCTAGTTAGAAAGCTTTGCCA 58.524 36.000 18.30 0.00 44.63 4.92
2081 2173 7.115414 AGATTCTAGTTAGAAAGCTTTGCCAT 58.885 34.615 18.30 2.27 44.63 4.40
2082 2174 6.743575 TTCTAGTTAGAAAGCTTTGCCATC 57.256 37.500 18.30 1.03 39.22 3.51
2083 2175 5.186198 TCTAGTTAGAAAGCTTTGCCATCC 58.814 41.667 18.30 0.25 0.00 3.51
2084 2176 4.039603 AGTTAGAAAGCTTTGCCATCCT 57.960 40.909 18.30 8.71 0.00 3.24
2085 2177 3.760684 AGTTAGAAAGCTTTGCCATCCTG 59.239 43.478 18.30 0.00 0.00 3.86
2086 2178 0.893447 AGAAAGCTTTGCCATCCTGC 59.107 50.000 18.30 0.00 0.00 4.85
2087 2179 0.604578 GAAAGCTTTGCCATCCTGCA 59.395 50.000 18.30 0.00 40.07 4.41
2088 2180 1.206371 GAAAGCTTTGCCATCCTGCAT 59.794 47.619 18.30 0.00 41.70 3.96
2089 2181 2.148446 AAGCTTTGCCATCCTGCATA 57.852 45.000 0.00 0.00 41.70 3.14
2090 2182 1.688772 AGCTTTGCCATCCTGCATAG 58.311 50.000 0.00 0.00 41.70 2.23
2091 2183 0.672342 GCTTTGCCATCCTGCATAGG 59.328 55.000 5.80 0.00 46.06 2.57
2092 2184 2.025863 GCTTTGCCATCCTGCATAGGT 61.026 52.381 5.80 0.00 44.88 3.08
2093 2185 2.381911 CTTTGCCATCCTGCATAGGTT 58.618 47.619 0.00 0.00 44.88 3.50
2094 2186 2.530460 TTGCCATCCTGCATAGGTTT 57.470 45.000 0.00 0.00 44.88 3.27
2095 2187 1.766494 TGCCATCCTGCATAGGTTTG 58.234 50.000 0.00 0.00 44.88 2.93
2096 2188 1.284491 TGCCATCCTGCATAGGTTTGA 59.716 47.619 0.00 0.00 44.88 2.69
2097 2189 2.291475 TGCCATCCTGCATAGGTTTGAA 60.291 45.455 0.00 0.00 44.88 2.69
2098 2190 2.099756 GCCATCCTGCATAGGTTTGAAC 59.900 50.000 0.00 0.00 44.88 3.18
2099 2191 3.624777 CCATCCTGCATAGGTTTGAACT 58.375 45.455 0.00 0.00 44.88 3.01
2100 2192 4.019174 CCATCCTGCATAGGTTTGAACTT 58.981 43.478 0.00 0.00 44.88 2.66
2101 2193 4.096984 CCATCCTGCATAGGTTTGAACTTC 59.903 45.833 0.00 0.00 44.88 3.01
2102 2194 4.365514 TCCTGCATAGGTTTGAACTTCA 57.634 40.909 0.00 0.00 44.88 3.02
2103 2195 4.724399 TCCTGCATAGGTTTGAACTTCAA 58.276 39.130 0.00 0.00 44.88 2.69
2104 2196 4.761739 TCCTGCATAGGTTTGAACTTCAAG 59.238 41.667 4.43 0.00 44.88 3.02
2105 2197 4.761739 CCTGCATAGGTTTGAACTTCAAGA 59.238 41.667 4.43 0.00 39.39 3.02
2106 2198 5.416952 CCTGCATAGGTTTGAACTTCAAGAT 59.583 40.000 4.43 0.00 39.39 2.40
2107 2199 6.599244 CCTGCATAGGTTTGAACTTCAAGATA 59.401 38.462 4.43 0.97 39.39 1.98
2108 2200 7.284034 CCTGCATAGGTTTGAACTTCAAGATAT 59.716 37.037 4.43 2.95 39.39 1.63
2109 2201 7.988737 TGCATAGGTTTGAACTTCAAGATATG 58.011 34.615 17.90 17.90 37.70 1.78
2110 2202 7.611467 TGCATAGGTTTGAACTTCAAGATATGT 59.389 33.333 20.34 5.86 37.70 2.29
2111 2203 8.462016 GCATAGGTTTGAACTTCAAGATATGTT 58.538 33.333 20.34 0.15 37.70 2.71
2112 2204 9.994432 CATAGGTTTGAACTTCAAGATATGTTC 57.006 33.333 15.96 0.00 37.70 3.18
2113 2205 9.965902 ATAGGTTTGAACTTCAAGATATGTTCT 57.034 29.630 4.43 0.00 37.70 3.01
2115 2207 9.965902 AGGTTTGAACTTCAAGATATGTTCTAT 57.034 29.630 4.43 0.00 37.70 1.98
2116 2208 9.994432 GGTTTGAACTTCAAGATATGTTCTATG 57.006 33.333 4.43 0.00 37.70 2.23
2119 2211 8.722480 TGAACTTCAAGATATGTTCTATGTGG 57.278 34.615 0.00 0.00 39.38 4.17
2120 2212 7.770433 TGAACTTCAAGATATGTTCTATGTGGG 59.230 37.037 0.00 0.00 39.38 4.61
2121 2213 7.437713 ACTTCAAGATATGTTCTATGTGGGA 57.562 36.000 0.00 0.00 33.05 4.37
2122 2214 7.504403 ACTTCAAGATATGTTCTATGTGGGAG 58.496 38.462 0.00 0.00 33.05 4.30
2123 2215 7.345653 ACTTCAAGATATGTTCTATGTGGGAGA 59.654 37.037 0.00 0.00 33.05 3.71
2124 2216 7.675161 TCAAGATATGTTCTATGTGGGAGAA 57.325 36.000 0.00 0.00 33.05 2.87
2125 2217 7.730084 TCAAGATATGTTCTATGTGGGAGAAG 58.270 38.462 0.00 0.00 33.64 2.85
2126 2218 6.107901 AGATATGTTCTATGTGGGAGAAGC 57.892 41.667 0.00 0.00 33.64 3.86
2127 2219 5.604231 AGATATGTTCTATGTGGGAGAAGCA 59.396 40.000 0.00 0.00 33.64 3.91
2128 2220 4.574674 ATGTTCTATGTGGGAGAAGCAA 57.425 40.909 0.00 0.00 33.64 3.91
2129 2221 4.365514 TGTTCTATGTGGGAGAAGCAAA 57.634 40.909 0.00 0.00 33.64 3.68
2130 2222 4.724399 TGTTCTATGTGGGAGAAGCAAAA 58.276 39.130 0.00 0.00 33.64 2.44
2131 2223 5.136828 TGTTCTATGTGGGAGAAGCAAAAA 58.863 37.500 0.00 0.00 33.64 1.94
2166 2258 7.751047 TCATATAGAAACTTAGTTGTGTCGC 57.249 36.000 0.00 0.00 29.89 5.19
2167 2259 7.317390 TCATATAGAAACTTAGTTGTGTCGCA 58.683 34.615 0.00 0.00 29.89 5.10
2168 2260 5.840940 ATAGAAACTTAGTTGTGTCGCAC 57.159 39.130 0.00 3.44 34.56 5.34
2169 2261 2.870411 AGAAACTTAGTTGTGTCGCACC 59.130 45.455 0.00 0.00 32.73 5.01
2170 2262 1.214367 AACTTAGTTGTGTCGCACCG 58.786 50.000 0.00 0.00 32.73 4.94
2171 2263 0.386476 ACTTAGTTGTGTCGCACCGA 59.614 50.000 7.38 0.00 32.73 4.69
2172 2264 1.000506 ACTTAGTTGTGTCGCACCGAT 59.999 47.619 7.38 0.00 38.42 4.18
2173 2265 1.654105 CTTAGTTGTGTCGCACCGATC 59.346 52.381 7.38 0.00 38.42 3.69
2174 2266 0.885879 TAGTTGTGTCGCACCGATCT 59.114 50.000 7.38 4.13 38.42 2.75
2175 2267 0.033504 AGTTGTGTCGCACCGATCTT 59.966 50.000 7.38 0.00 38.42 2.40
2176 2268 1.271379 AGTTGTGTCGCACCGATCTTA 59.729 47.619 7.38 0.00 38.42 2.10
2177 2269 2.063266 GTTGTGTCGCACCGATCTTAA 58.937 47.619 7.38 0.00 38.42 1.85
2178 2270 2.442212 TGTGTCGCACCGATCTTAAA 57.558 45.000 7.38 0.00 38.42 1.52
2179 2271 2.333926 TGTGTCGCACCGATCTTAAAG 58.666 47.619 7.38 0.00 38.42 1.85
2180 2272 1.060698 GTGTCGCACCGATCTTAAAGC 59.939 52.381 0.00 0.00 38.42 3.51
2181 2273 0.297820 GTCGCACCGATCTTAAAGCG 59.702 55.000 0.00 0.00 45.79 4.68
2186 2278 4.992381 GCACCGATCTTAAAGCGATATT 57.008 40.909 0.00 0.00 0.00 1.28
2187 2279 4.702392 GCACCGATCTTAAAGCGATATTG 58.298 43.478 0.00 0.00 0.00 1.90
2188 2280 4.447724 GCACCGATCTTAAAGCGATATTGA 59.552 41.667 0.00 0.00 0.00 2.57
2189 2281 5.050363 GCACCGATCTTAAAGCGATATTGAA 60.050 40.000 0.00 0.00 0.00 2.69
2190 2282 6.584954 CACCGATCTTAAAGCGATATTGAAG 58.415 40.000 0.00 0.00 0.00 3.02
2191 2283 6.420903 CACCGATCTTAAAGCGATATTGAAGA 59.579 38.462 0.00 0.00 0.00 2.87
2192 2284 6.642950 ACCGATCTTAAAGCGATATTGAAGAG 59.357 38.462 0.00 0.00 0.00 2.85
2193 2285 6.090088 CCGATCTTAAAGCGATATTGAAGAGG 59.910 42.308 0.00 0.00 0.00 3.69
2194 2286 6.642950 CGATCTTAAAGCGATATTGAAGAGGT 59.357 38.462 0.00 0.00 0.00 3.85
2195 2287 7.808381 CGATCTTAAAGCGATATTGAAGAGGTA 59.192 37.037 0.00 0.00 0.00 3.08
2196 2288 9.134734 GATCTTAAAGCGATATTGAAGAGGTAG 57.865 37.037 0.00 0.00 0.00 3.18
2197 2289 7.434492 TCTTAAAGCGATATTGAAGAGGTAGG 58.566 38.462 0.00 0.00 0.00 3.18
2198 2290 5.871396 AAAGCGATATTGAAGAGGTAGGA 57.129 39.130 0.00 0.00 0.00 2.94
2199 2291 6.426646 AAAGCGATATTGAAGAGGTAGGAT 57.573 37.500 0.00 0.00 0.00 3.24
2200 2292 7.540474 AAAGCGATATTGAAGAGGTAGGATA 57.460 36.000 0.00 0.00 0.00 2.59
2201 2293 6.767524 AGCGATATTGAAGAGGTAGGATAG 57.232 41.667 0.00 0.00 0.00 2.08
2202 2294 5.126384 AGCGATATTGAAGAGGTAGGATAGC 59.874 44.000 0.00 0.00 39.93 2.97
2203 2295 5.105716 GCGATATTGAAGAGGTAGGATAGCA 60.106 44.000 0.00 0.00 42.67 3.49
2204 2296 6.559810 CGATATTGAAGAGGTAGGATAGCAG 58.440 44.000 0.00 0.00 42.67 4.24
2205 2297 6.405286 CGATATTGAAGAGGTAGGATAGCAGG 60.405 46.154 0.00 0.00 42.67 4.85
2206 2298 2.964209 TGAAGAGGTAGGATAGCAGGG 58.036 52.381 0.00 0.00 42.67 4.45
2207 2299 1.621317 GAAGAGGTAGGATAGCAGGGC 59.379 57.143 0.00 0.00 42.67 5.19
2208 2300 0.178918 AGAGGTAGGATAGCAGGGCC 60.179 60.000 0.00 0.00 42.67 5.80
2209 2301 0.178918 GAGGTAGGATAGCAGGGCCT 60.179 60.000 0.00 0.00 42.67 5.19
2210 2302 0.472734 AGGTAGGATAGCAGGGCCTG 60.473 60.000 29.44 29.44 42.67 4.85
2211 2303 1.484444 GGTAGGATAGCAGGGCCTGG 61.484 65.000 33.43 16.27 39.30 4.45
2212 2304 1.152030 TAGGATAGCAGGGCCTGGG 60.152 63.158 33.43 11.33 33.28 4.45
2213 2305 1.973346 TAGGATAGCAGGGCCTGGGT 61.973 60.000 33.43 21.39 33.28 4.51
2214 2306 2.512896 GATAGCAGGGCCTGGGTG 59.487 66.667 33.43 11.08 31.21 4.61
2215 2307 3.781605 GATAGCAGGGCCTGGGTGC 62.782 68.421 33.43 20.80 37.48 5.01
2219 2311 4.290622 CAGGGCCTGGGTGCAAGT 62.291 66.667 26.34 0.00 0.00 3.16
2220 2312 4.290622 AGGGCCTGGGTGCAAGTG 62.291 66.667 4.50 0.00 0.00 3.16
2222 2314 4.982701 GGCCTGGGTGCAAGTGCT 62.983 66.667 4.69 0.00 42.66 4.40
2223 2315 3.368571 GCCTGGGTGCAAGTGCTC 61.369 66.667 4.69 0.52 42.66 4.26
2224 2316 2.433446 CCTGGGTGCAAGTGCTCT 59.567 61.111 4.69 0.00 42.66 4.09
2225 2317 1.679311 CCTGGGTGCAAGTGCTCTA 59.321 57.895 4.69 0.00 42.66 2.43
2226 2318 0.036732 CCTGGGTGCAAGTGCTCTAA 59.963 55.000 4.69 0.00 42.66 2.10
2227 2319 1.545428 CCTGGGTGCAAGTGCTCTAAA 60.545 52.381 4.69 0.00 42.66 1.85
2228 2320 2.229792 CTGGGTGCAAGTGCTCTAAAA 58.770 47.619 4.69 0.00 42.66 1.52
2229 2321 2.622942 CTGGGTGCAAGTGCTCTAAAAA 59.377 45.455 4.69 0.00 42.66 1.94
2230 2322 3.230134 TGGGTGCAAGTGCTCTAAAAAT 58.770 40.909 4.69 0.00 42.66 1.82
2231 2323 3.255642 TGGGTGCAAGTGCTCTAAAAATC 59.744 43.478 4.69 0.00 42.66 2.17
2232 2324 3.367395 GGGTGCAAGTGCTCTAAAAATCC 60.367 47.826 4.69 0.00 42.66 3.01
2233 2325 3.255642 GGTGCAAGTGCTCTAAAAATCCA 59.744 43.478 4.69 0.00 42.66 3.41
2234 2326 4.229876 GTGCAAGTGCTCTAAAAATCCAC 58.770 43.478 4.69 0.00 42.66 4.02
2235 2327 3.058293 TGCAAGTGCTCTAAAAATCCACG 60.058 43.478 4.69 0.00 42.66 4.94
2236 2328 3.058224 GCAAGTGCTCTAAAAATCCACGT 60.058 43.478 0.00 0.00 38.21 4.49
2237 2329 4.712763 CAAGTGCTCTAAAAATCCACGTC 58.287 43.478 0.00 0.00 0.00 4.34
2238 2330 3.335579 AGTGCTCTAAAAATCCACGTCC 58.664 45.455 0.00 0.00 0.00 4.79
2279 2371 6.908870 TTGTCCATGAAGATATCAAGTTCG 57.091 37.500 5.32 0.00 42.54 3.95
2441 2534 2.556559 GGGTTTAAGGGCATCTCCAACA 60.557 50.000 0.00 0.00 36.21 3.33
2444 2537 0.392461 TAAGGGCATCTCCAACACGC 60.392 55.000 0.00 0.00 36.21 5.34
2484 2577 2.049433 GTGTGGACCGAGGTGTCG 60.049 66.667 0.00 0.00 46.39 4.35
2526 2619 1.991167 GGTACCCCATCGGTCCACA 60.991 63.158 0.00 0.00 43.58 4.17
2533 2626 3.419759 ATCGGTCCACAAACGCGC 61.420 61.111 5.73 0.00 0.00 6.86
2559 2652 0.746563 GTCCGAAATCCCGCAATCCA 60.747 55.000 0.00 0.00 0.00 3.41
2568 2661 1.135315 CCGCAATCCAGACGCAAAG 59.865 57.895 0.00 0.00 0.00 2.77
2569 2662 1.512734 CGCAATCCAGACGCAAAGC 60.513 57.895 0.00 0.00 0.00 3.51
2571 2664 0.039256 GCAATCCAGACGCAAAGCAA 60.039 50.000 0.00 0.00 0.00 3.91
2573 2666 2.741612 CAATCCAGACGCAAAGCAAAA 58.258 42.857 0.00 0.00 0.00 2.44
2588 2681 0.037975 CAAAATGAGCTTTGCGGGCT 60.038 50.000 0.00 0.00 43.26 5.19
2591 2684 0.610232 AATGAGCTTTGCGGGCTTCT 60.610 50.000 0.00 0.00 40.40 2.85
2596 2689 1.600636 CTTTGCGGGCTTCTGGACA 60.601 57.895 0.00 0.00 0.00 4.02
2611 2704 3.851845 GACAGCCACCACGTACGCA 62.852 63.158 16.72 0.00 0.00 5.24
2612 2705 2.434185 CAGCCACCACGTACGCAT 60.434 61.111 16.72 0.00 0.00 4.73
2626 2719 1.459450 ACGCATCTAACCGCCAAATT 58.541 45.000 0.00 0.00 0.00 1.82
2639 2732 2.763448 CGCCAAATTCCTCCCCAAAATA 59.237 45.455 0.00 0.00 0.00 1.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 0.692476 TGAGCTGGTGCCTTGTGTAT 59.308 50.000 0.00 0.00 40.80 2.29
35 36 1.802960 CTAGCTGTTGTTGAGCTGGTG 59.197 52.381 0.00 0.00 46.44 4.17
46 47 5.542779 AGAAAACACTAGGACTAGCTGTTG 58.457 41.667 18.80 9.26 37.42 3.33
63 64 9.857957 ACAAGTCTTATAGTAGCAGTAGAAAAC 57.142 33.333 0.00 0.00 0.00 2.43
81 82 7.450903 ACTAACCAAATGCTAGTACAAGTCTT 58.549 34.615 0.00 0.00 0.00 3.01
83 84 7.603024 AGAACTAACCAAATGCTAGTACAAGTC 59.397 37.037 0.00 0.00 0.00 3.01
130 136 9.403583 GTGATGGAGTTGGTTAATTAGGATTAA 57.596 33.333 0.00 0.00 35.81 1.40
134 140 6.636454 AGTGATGGAGTTGGTTAATTAGGA 57.364 37.500 0.00 0.00 0.00 2.94
183 189 7.713507 TGCCAGGAGTATATTTAACACATGTAC 59.286 37.037 0.00 0.00 0.00 2.90
190 196 8.492415 AGTAGATGCCAGGAGTATATTTAACA 57.508 34.615 0.00 0.00 0.00 2.41
193 199 6.668283 GGGAGTAGATGCCAGGAGTATATTTA 59.332 42.308 0.00 0.00 39.77 1.40
202 208 0.105453 GGAGGGAGTAGATGCCAGGA 60.105 60.000 0.00 0.00 43.31 3.86
216 222 5.681639 AGACAAATATTTAGGAACGGAGGG 58.318 41.667 0.00 0.00 0.00 4.30
217 223 7.625828 AAAGACAAATATTTAGGAACGGAGG 57.374 36.000 0.00 0.00 0.00 4.30
234 240 9.965824 GTCCATTTGAAATCTCTAAAAAGACAA 57.034 29.630 0.00 0.00 0.00 3.18
235 241 9.354673 AGTCCATTTGAAATCTCTAAAAAGACA 57.645 29.630 0.00 0.00 0.00 3.41
239 245 9.581289 TGGTAGTCCATTTGAAATCTCTAAAAA 57.419 29.630 0.00 0.00 39.03 1.94
240 246 9.010029 GTGGTAGTCCATTTGAAATCTCTAAAA 57.990 33.333 0.00 0.00 46.20 1.52
241 247 8.160765 TGTGGTAGTCCATTTGAAATCTCTAAA 58.839 33.333 0.00 0.00 46.20 1.85
242 248 7.685481 TGTGGTAGTCCATTTGAAATCTCTAA 58.315 34.615 0.00 0.00 46.20 2.10
243 249 7.252612 TGTGGTAGTCCATTTGAAATCTCTA 57.747 36.000 0.00 0.00 46.20 2.43
244 250 6.126863 TGTGGTAGTCCATTTGAAATCTCT 57.873 37.500 0.00 0.00 46.20 3.10
245 251 7.254455 CGTATGTGGTAGTCCATTTGAAATCTC 60.254 40.741 0.00 0.00 46.20 2.75
246 252 6.538742 CGTATGTGGTAGTCCATTTGAAATCT 59.461 38.462 0.00 0.00 46.20 2.40
247 253 6.238374 CCGTATGTGGTAGTCCATTTGAAATC 60.238 42.308 0.00 0.00 46.20 2.17
248 254 5.588648 CCGTATGTGGTAGTCCATTTGAAAT 59.411 40.000 0.00 0.00 46.20 2.17
249 255 4.938832 CCGTATGTGGTAGTCCATTTGAAA 59.061 41.667 0.00 0.00 46.20 2.69
250 256 4.223255 TCCGTATGTGGTAGTCCATTTGAA 59.777 41.667 0.00 0.00 46.20 2.69
251 257 3.770388 TCCGTATGTGGTAGTCCATTTGA 59.230 43.478 0.00 0.00 46.20 2.69
252 258 4.131649 TCCGTATGTGGTAGTCCATTTG 57.868 45.455 0.00 0.00 46.20 2.32
253 259 4.163458 ACATCCGTATGTGGTAGTCCATTT 59.837 41.667 0.00 0.00 44.79 2.32
254 260 3.709653 ACATCCGTATGTGGTAGTCCATT 59.290 43.478 0.00 0.00 44.79 3.16
255 261 3.305720 ACATCCGTATGTGGTAGTCCAT 58.694 45.455 0.00 0.00 44.79 3.41
256 262 2.742348 ACATCCGTATGTGGTAGTCCA 58.258 47.619 0.00 0.00 44.79 4.02
257 263 6.770746 ATATACATCCGTATGTGGTAGTCC 57.229 41.667 3.56 0.00 45.99 3.85
258 264 8.610896 GTCTATATACATCCGTATGTGGTAGTC 58.389 40.741 3.56 0.00 45.99 2.59
259 265 8.105197 TGTCTATATACATCCGTATGTGGTAGT 58.895 37.037 3.56 0.00 45.99 2.73
260 266 8.502105 TGTCTATATACATCCGTATGTGGTAG 57.498 38.462 3.56 3.93 45.99 3.18
262 268 7.956328 ATGTCTATATACATCCGTATGTGGT 57.044 36.000 3.56 0.00 45.99 4.16
295 301 5.446473 CGGAGCAAAATGAGTGAATCTACAC 60.446 44.000 0.00 0.00 40.60 2.90
296 302 4.631377 CGGAGCAAAATGAGTGAATCTACA 59.369 41.667 0.00 0.00 0.00 2.74
297 303 4.631813 ACGGAGCAAAATGAGTGAATCTAC 59.368 41.667 0.00 0.00 0.00 2.59
298 304 4.832248 ACGGAGCAAAATGAGTGAATCTA 58.168 39.130 0.00 0.00 0.00 1.98
299 305 3.679389 ACGGAGCAAAATGAGTGAATCT 58.321 40.909 0.00 0.00 0.00 2.40
300 306 5.065218 ACATACGGAGCAAAATGAGTGAATC 59.935 40.000 0.00 0.00 0.00 2.52
301 307 4.943705 ACATACGGAGCAAAATGAGTGAAT 59.056 37.500 0.00 0.00 0.00 2.57
302 308 4.323417 ACATACGGAGCAAAATGAGTGAA 58.677 39.130 0.00 0.00 0.00 3.18
303 309 3.937814 ACATACGGAGCAAAATGAGTGA 58.062 40.909 0.00 0.00 0.00 3.41
304 310 4.870426 ACTACATACGGAGCAAAATGAGTG 59.130 41.667 0.00 0.00 0.00 3.51
305 311 5.086104 ACTACATACGGAGCAAAATGAGT 57.914 39.130 0.00 0.00 0.00 3.41
306 312 5.005779 GTGACTACATACGGAGCAAAATGAG 59.994 44.000 0.00 0.00 0.00 2.90
307 313 4.868171 GTGACTACATACGGAGCAAAATGA 59.132 41.667 0.00 0.00 0.00 2.57
308 314 4.870426 AGTGACTACATACGGAGCAAAATG 59.130 41.667 0.00 0.00 0.00 2.32
309 315 5.086104 AGTGACTACATACGGAGCAAAAT 57.914 39.130 0.00 0.00 0.00 1.82
310 316 4.530710 AGTGACTACATACGGAGCAAAA 57.469 40.909 0.00 0.00 0.00 2.44
311 317 4.242475 CAAGTGACTACATACGGAGCAAA 58.758 43.478 0.00 0.00 0.00 3.68
312 318 3.257375 ACAAGTGACTACATACGGAGCAA 59.743 43.478 0.00 0.00 0.00 3.91
313 319 2.823747 ACAAGTGACTACATACGGAGCA 59.176 45.455 0.00 0.00 0.00 4.26
314 320 3.505464 ACAAGTGACTACATACGGAGC 57.495 47.619 0.00 0.00 0.00 4.70
315 321 5.055642 TCAACAAGTGACTACATACGGAG 57.944 43.478 0.00 0.00 0.00 4.63
316 322 5.456548 TTCAACAAGTGACTACATACGGA 57.543 39.130 0.00 0.00 35.39 4.69
317 323 6.590292 AGATTTCAACAAGTGACTACATACGG 59.410 38.462 0.00 0.00 35.39 4.02
318 324 7.542477 AGAGATTTCAACAAGTGACTACATACG 59.458 37.037 0.00 0.00 35.39 3.06
319 325 8.764524 AGAGATTTCAACAAGTGACTACATAC 57.235 34.615 0.00 0.00 35.39 2.39
321 327 8.807118 TCTAGAGATTTCAACAAGTGACTACAT 58.193 33.333 0.00 0.00 35.39 2.29
322 328 8.178313 TCTAGAGATTTCAACAAGTGACTACA 57.822 34.615 0.00 0.00 35.39 2.74
323 329 9.134734 CTTCTAGAGATTTCAACAAGTGACTAC 57.865 37.037 0.00 0.00 35.39 2.73
324 330 8.307483 CCTTCTAGAGATTTCAACAAGTGACTA 58.693 37.037 0.00 0.00 35.39 2.59
325 331 7.015682 TCCTTCTAGAGATTTCAACAAGTGACT 59.984 37.037 0.00 0.00 35.39 3.41
326 332 7.117092 GTCCTTCTAGAGATTTCAACAAGTGAC 59.883 40.741 0.00 0.00 35.39 3.67
327 333 7.155328 GTCCTTCTAGAGATTTCAACAAGTGA 58.845 38.462 0.00 0.00 0.00 3.41
328 334 6.931281 TGTCCTTCTAGAGATTTCAACAAGTG 59.069 38.462 0.00 0.00 0.00 3.16
329 335 7.067496 TGTCCTTCTAGAGATTTCAACAAGT 57.933 36.000 0.00 0.00 0.00 3.16
330 336 7.969536 TTGTCCTTCTAGAGATTTCAACAAG 57.030 36.000 0.00 0.00 0.00 3.16
331 337 8.924511 ATTTGTCCTTCTAGAGATTTCAACAA 57.075 30.769 0.00 0.00 0.00 2.83
345 351 8.049721 CCTCTGTTCCTAAATATTTGTCCTTCT 58.950 37.037 11.05 0.00 0.00 2.85
346 352 7.283354 CCCTCTGTTCCTAAATATTTGTCCTTC 59.717 40.741 11.05 0.00 0.00 3.46
347 353 7.036863 TCCCTCTGTTCCTAAATATTTGTCCTT 60.037 37.037 11.05 0.00 0.00 3.36
348 354 6.447084 TCCCTCTGTTCCTAAATATTTGTCCT 59.553 38.462 11.05 0.00 0.00 3.85
349 355 6.659824 TCCCTCTGTTCCTAAATATTTGTCC 58.340 40.000 11.05 0.00 0.00 4.02
350 356 7.339482 ACTCCCTCTGTTCCTAAATATTTGTC 58.661 38.462 11.05 0.00 0.00 3.18
351 357 7.272144 ACTCCCTCTGTTCCTAAATATTTGT 57.728 36.000 11.05 0.00 0.00 2.83
352 358 8.487028 AGTACTCCCTCTGTTCCTAAATATTTG 58.513 37.037 11.05 1.40 0.00 2.32
353 359 8.625467 AGTACTCCCTCTGTTCCTAAATATTT 57.375 34.615 5.89 5.89 0.00 1.40
354 360 9.145442 GTAGTACTCCCTCTGTTCCTAAATATT 57.855 37.037 0.00 0.00 0.00 1.28
355 361 7.447853 CGTAGTACTCCCTCTGTTCCTAAATAT 59.552 40.741 0.00 0.00 0.00 1.28
356 362 6.769822 CGTAGTACTCCCTCTGTTCCTAAATA 59.230 42.308 0.00 0.00 0.00 1.40
357 363 5.593502 CGTAGTACTCCCTCTGTTCCTAAAT 59.406 44.000 0.00 0.00 0.00 1.40
358 364 4.946157 CGTAGTACTCCCTCTGTTCCTAAA 59.054 45.833 0.00 0.00 0.00 1.85
359 365 4.018960 ACGTAGTACTCCCTCTGTTCCTAA 60.019 45.833 0.00 0.00 41.94 2.69
360 366 3.521126 ACGTAGTACTCCCTCTGTTCCTA 59.479 47.826 0.00 0.00 41.94 2.94
361 367 2.308275 ACGTAGTACTCCCTCTGTTCCT 59.692 50.000 0.00 0.00 41.94 3.36
362 368 2.720915 ACGTAGTACTCCCTCTGTTCC 58.279 52.381 0.00 0.00 41.94 3.62
388 394 9.537848 CTAATAACACTGGTAAACGACAATTTC 57.462 33.333 0.00 0.00 0.00 2.17
389 395 8.019094 GCTAATAACACTGGTAAACGACAATTT 58.981 33.333 0.00 0.00 0.00 1.82
417 423 5.596836 TTTGCAAGAAAAGTCCTTGTGAT 57.403 34.783 0.00 0.00 42.11 3.06
463 472 4.513318 GCTTATGGAGGTCAACTGCTATTC 59.487 45.833 0.00 0.00 38.54 1.75
594 603 4.893608 TCGACAGATTGGTGAAGATCAAA 58.106 39.130 0.00 0.00 0.00 2.69
658 668 8.526681 CAGAGCAATTTCAAGCGAATTATTTAC 58.473 33.333 0.00 0.00 35.48 2.01
668 678 0.457337 GCCCAGAGCAATTTCAAGCG 60.457 55.000 0.00 0.00 42.97 4.68
754 778 9.144298 TCCTTAACTAAGCTGCTTATATGTAGT 57.856 33.333 21.32 13.92 32.02 2.73
776 800 1.463674 GACGGTCCAAATGCATCCTT 58.536 50.000 0.00 0.00 0.00 3.36
795 819 0.577269 GCCGTTGATTCTTCGGATCG 59.423 55.000 18.76 0.00 46.05 3.69
850 874 1.009389 CCTTCACGCGTTGACTCTCC 61.009 60.000 10.22 0.00 32.26 3.71
863 887 1.672145 GCCAAGTCGTCTACCCTTCAC 60.672 57.143 0.00 0.00 0.00 3.18
964 995 6.552445 ACTCTCAACTTATGCCTATCTTGT 57.448 37.500 0.00 0.00 0.00 3.16
965 996 6.238320 GCAACTCTCAACTTATGCCTATCTTG 60.238 42.308 0.00 0.00 0.00 3.02
966 997 5.819901 GCAACTCTCAACTTATGCCTATCTT 59.180 40.000 0.00 0.00 0.00 2.40
967 998 5.104776 TGCAACTCTCAACTTATGCCTATCT 60.105 40.000 0.00 0.00 33.01 1.98
968 999 5.118990 TGCAACTCTCAACTTATGCCTATC 58.881 41.667 0.00 0.00 33.01 2.08
969 1000 5.102953 TGCAACTCTCAACTTATGCCTAT 57.897 39.130 0.00 0.00 33.01 2.57
971 1002 3.341823 CTGCAACTCTCAACTTATGCCT 58.658 45.455 0.00 0.00 33.01 4.75
1087 1148 0.835941 ATCCTCTCTTCGCCATTGCT 59.164 50.000 0.00 0.00 34.43 3.91
1109 1185 3.499737 CGAACATGTGCTCCCGCC 61.500 66.667 0.00 0.00 34.43 6.13
1505 1581 1.790387 GGCATGAGCGTGACAACTC 59.210 57.895 0.00 0.70 43.41 3.01
1739 1831 9.643693 GGACACAATTTCATCTTATTTTGTGAT 57.356 29.630 17.52 5.01 44.01 3.06
1740 1832 8.637099 TGGACACAATTTCATCTTATTTTGTGA 58.363 29.630 17.52 0.00 44.01 3.58
1741 1833 8.815141 TGGACACAATTTCATCTTATTTTGTG 57.185 30.769 10.96 10.96 45.72 3.33
1754 1846 4.678509 TTCGCTACATGGACACAATTTC 57.321 40.909 0.00 0.00 0.00 2.17
1756 1848 5.643379 ATTTTCGCTACATGGACACAATT 57.357 34.783 0.00 0.00 0.00 2.32
1770 1862 8.607459 GCATGTGCTCTAATATATATTTTCGCT 58.393 33.333 13.09 0.00 38.21 4.93
1771 1863 8.390354 TGCATGTGCTCTAATATATATTTTCGC 58.610 33.333 13.09 12.51 42.66 4.70
1772 1864 9.694520 GTGCATGTGCTCTAATATATATTTTCG 57.305 33.333 13.09 3.64 42.66 3.46
1773 1865 9.994432 GGTGCATGTGCTCTAATATATATTTTC 57.006 33.333 13.09 2.21 42.66 2.29
1774 1866 8.960591 GGGTGCATGTGCTCTAATATATATTTT 58.039 33.333 13.09 0.00 42.66 1.82
1775 1867 8.108999 TGGGTGCATGTGCTCTAATATATATTT 58.891 33.333 13.09 0.00 42.66 1.40
1776 1868 7.632861 TGGGTGCATGTGCTCTAATATATATT 58.367 34.615 12.51 12.51 42.66 1.28
1777 1869 7.199167 TGGGTGCATGTGCTCTAATATATAT 57.801 36.000 6.55 0.00 42.66 0.86
1778 1870 6.352137 CCTGGGTGCATGTGCTCTAATATATA 60.352 42.308 6.55 0.00 42.66 0.86
1779 1871 5.494724 CTGGGTGCATGTGCTCTAATATAT 58.505 41.667 6.55 0.00 42.66 0.86
1780 1872 4.263025 CCTGGGTGCATGTGCTCTAATATA 60.263 45.833 6.55 0.00 42.66 0.86
1781 1873 3.497405 CCTGGGTGCATGTGCTCTAATAT 60.497 47.826 6.55 0.00 42.66 1.28
1782 1874 2.158769 CCTGGGTGCATGTGCTCTAATA 60.159 50.000 6.55 0.00 42.66 0.98
1783 1875 1.409241 CCTGGGTGCATGTGCTCTAAT 60.409 52.381 6.55 0.00 42.66 1.73
1784 1876 0.035152 CCTGGGTGCATGTGCTCTAA 60.035 55.000 6.55 0.00 42.66 2.10
1785 1877 1.603842 CCTGGGTGCATGTGCTCTA 59.396 57.895 6.55 0.00 42.66 2.43
1786 1878 2.353958 CCTGGGTGCATGTGCTCT 59.646 61.111 6.55 0.00 42.66 4.09
1787 1879 3.446570 GCCTGGGTGCATGTGCTC 61.447 66.667 6.55 2.50 42.66 4.26
1790 1882 4.371417 AGGGCCTGGGTGCATGTG 62.371 66.667 4.50 0.00 0.00 3.21
1791 1883 4.052518 GAGGGCCTGGGTGCATGT 62.053 66.667 12.95 0.00 0.00 3.21
1792 1884 3.711059 GAGAGGGCCTGGGTGCATG 62.711 68.421 12.95 0.00 0.00 4.06
1793 1885 2.551856 TAGAGAGGGCCTGGGTGCAT 62.552 60.000 12.95 0.00 0.00 3.96
1794 1886 2.551856 ATAGAGAGGGCCTGGGTGCA 62.552 60.000 12.95 0.00 0.00 4.57
1795 1887 1.763546 GATAGAGAGGGCCTGGGTGC 61.764 65.000 12.95 0.00 0.00 5.01
1796 1888 0.105246 AGATAGAGAGGGCCTGGGTG 60.105 60.000 12.95 0.00 0.00 4.61
1797 1889 1.431243 CTAGATAGAGAGGGCCTGGGT 59.569 57.143 12.95 0.00 0.00 4.51
1798 1890 1.894978 GCTAGATAGAGAGGGCCTGGG 60.895 61.905 12.95 0.00 0.00 4.45
1799 1891 1.555967 GCTAGATAGAGAGGGCCTGG 58.444 60.000 12.95 0.00 0.00 4.45
1800 1892 1.203112 TGGCTAGATAGAGAGGGCCTG 60.203 57.143 12.95 0.00 40.15 4.85
1801 1893 1.162505 TGGCTAGATAGAGAGGGCCT 58.837 55.000 5.25 5.25 40.15 5.19
1802 1894 2.107366 GATGGCTAGATAGAGAGGGCC 58.893 57.143 0.00 0.00 39.93 5.80
1803 1895 2.107366 GGATGGCTAGATAGAGAGGGC 58.893 57.143 0.00 0.00 0.00 5.19
1804 1896 3.464720 TGGATGGCTAGATAGAGAGGG 57.535 52.381 0.00 0.00 0.00 4.30
1805 1897 5.104982 GGAAATGGATGGCTAGATAGAGAGG 60.105 48.000 0.00 0.00 0.00 3.69
1806 1898 5.721000 AGGAAATGGATGGCTAGATAGAGAG 59.279 44.000 0.00 0.00 0.00 3.20
1807 1899 5.483231 CAGGAAATGGATGGCTAGATAGAGA 59.517 44.000 0.00 0.00 0.00 3.10
1808 1900 5.732633 CAGGAAATGGATGGCTAGATAGAG 58.267 45.833 0.00 0.00 0.00 2.43
1809 1901 4.019860 GCAGGAAATGGATGGCTAGATAGA 60.020 45.833 0.00 0.00 0.00 1.98
1810 1902 4.019501 AGCAGGAAATGGATGGCTAGATAG 60.020 45.833 0.00 0.00 0.00 2.08
1811 1903 3.912528 AGCAGGAAATGGATGGCTAGATA 59.087 43.478 0.00 0.00 0.00 1.98
1812 1904 2.715336 AGCAGGAAATGGATGGCTAGAT 59.285 45.455 0.00 0.00 0.00 1.98
1813 1905 2.130193 AGCAGGAAATGGATGGCTAGA 58.870 47.619 0.00 0.00 0.00 2.43
1814 1906 2.653234 AGCAGGAAATGGATGGCTAG 57.347 50.000 0.00 0.00 0.00 3.42
1815 1907 3.386932 AAAGCAGGAAATGGATGGCTA 57.613 42.857 0.00 0.00 0.00 3.93
1816 1908 2.242882 AAAGCAGGAAATGGATGGCT 57.757 45.000 0.00 0.00 0.00 4.75
1817 1909 3.701040 TCTTAAAGCAGGAAATGGATGGC 59.299 43.478 0.00 0.00 0.00 4.40
1818 1910 6.475596 AATCTTAAAGCAGGAAATGGATGG 57.524 37.500 0.00 0.00 0.00 3.51
1819 1911 7.277098 CACAAATCTTAAAGCAGGAAATGGATG 59.723 37.037 0.00 0.00 0.00 3.51
1820 1912 7.038799 ACACAAATCTTAAAGCAGGAAATGGAT 60.039 33.333 0.00 0.00 0.00 3.41
1821 1913 6.267471 ACACAAATCTTAAAGCAGGAAATGGA 59.733 34.615 0.00 0.00 0.00 3.41
1822 1914 6.458210 ACACAAATCTTAAAGCAGGAAATGG 58.542 36.000 0.00 0.00 0.00 3.16
1823 1915 9.474920 TTTACACAAATCTTAAAGCAGGAAATG 57.525 29.630 0.00 0.00 0.00 2.32
1827 1919 9.290988 TGTATTTACACAAATCTTAAAGCAGGA 57.709 29.630 0.00 0.00 35.88 3.86
1885 1977 9.146984 CGTTGTATAGGTTTGAACTTCAAGATA 57.853 33.333 4.43 0.97 37.70 1.98
1886 1978 7.660208 ACGTTGTATAGGTTTGAACTTCAAGAT 59.340 33.333 4.43 1.45 37.70 2.40
1887 1979 6.987992 ACGTTGTATAGGTTTGAACTTCAAGA 59.012 34.615 4.43 0.00 37.70 3.02
1888 1980 7.042321 TCACGTTGTATAGGTTTGAACTTCAAG 60.042 37.037 4.43 0.00 37.70 3.02
1889 1981 6.762187 TCACGTTGTATAGGTTTGAACTTCAA 59.238 34.615 0.00 0.00 34.03 2.69
1890 1982 6.201425 GTCACGTTGTATAGGTTTGAACTTCA 59.799 38.462 0.00 0.00 0.00 3.02
1891 1983 6.201425 TGTCACGTTGTATAGGTTTGAACTTC 59.799 38.462 0.00 0.00 0.00 3.01
1892 1984 6.050432 TGTCACGTTGTATAGGTTTGAACTT 58.950 36.000 0.00 0.00 0.00 2.66
1893 1985 5.603596 TGTCACGTTGTATAGGTTTGAACT 58.396 37.500 0.00 0.00 0.00 3.01
1894 1986 5.910637 TGTCACGTTGTATAGGTTTGAAC 57.089 39.130 0.00 0.00 0.00 3.18
1895 1987 6.512091 GCTTTGTCACGTTGTATAGGTTTGAA 60.512 38.462 0.00 0.00 0.00 2.69
1896 1988 5.049954 GCTTTGTCACGTTGTATAGGTTTGA 60.050 40.000 0.00 0.00 0.00 2.69
1897 1989 5.049680 AGCTTTGTCACGTTGTATAGGTTTG 60.050 40.000 0.00 0.00 0.00 2.93
1898 1990 5.061179 AGCTTTGTCACGTTGTATAGGTTT 58.939 37.500 0.00 0.00 0.00 3.27
1899 1991 4.638304 AGCTTTGTCACGTTGTATAGGTT 58.362 39.130 0.00 0.00 0.00 3.50
1900 1992 4.267349 AGCTTTGTCACGTTGTATAGGT 57.733 40.909 0.00 0.00 0.00 3.08
1901 1993 5.408604 AGAAAGCTTTGTCACGTTGTATAGG 59.591 40.000 18.30 0.00 0.00 2.57
1902 1994 6.145534 TCAGAAAGCTTTGTCACGTTGTATAG 59.854 38.462 18.30 0.00 0.00 1.31
1903 1995 5.986741 TCAGAAAGCTTTGTCACGTTGTATA 59.013 36.000 18.30 0.00 0.00 1.47
1904 1996 4.814234 TCAGAAAGCTTTGTCACGTTGTAT 59.186 37.500 18.30 0.00 0.00 2.29
1905 1997 4.185394 TCAGAAAGCTTTGTCACGTTGTA 58.815 39.130 18.30 0.00 0.00 2.41
1906 1998 3.006940 TCAGAAAGCTTTGTCACGTTGT 58.993 40.909 18.30 0.00 0.00 3.32
1907 1999 3.063997 ACTCAGAAAGCTTTGTCACGTTG 59.936 43.478 18.30 0.00 0.00 4.10
1908 2000 3.270877 ACTCAGAAAGCTTTGTCACGTT 58.729 40.909 18.30 0.00 0.00 3.99
1909 2001 2.906354 ACTCAGAAAGCTTTGTCACGT 58.094 42.857 18.30 6.17 0.00 4.49
1910 2002 4.299155 TCTACTCAGAAAGCTTTGTCACG 58.701 43.478 18.30 5.53 0.00 4.35
1911 2003 6.648725 AGATTCTACTCAGAAAGCTTTGTCAC 59.351 38.462 18.30 1.49 43.89 3.67
1912 2004 6.763355 AGATTCTACTCAGAAAGCTTTGTCA 58.237 36.000 18.30 0.00 43.89 3.58
1913 2005 7.491048 CCTAGATTCTACTCAGAAAGCTTTGTC 59.509 40.741 18.30 2.75 43.89 3.18
1914 2006 7.179338 TCCTAGATTCTACTCAGAAAGCTTTGT 59.821 37.037 18.30 10.29 43.89 2.83
1915 2007 7.551585 TCCTAGATTCTACTCAGAAAGCTTTG 58.448 38.462 18.30 3.78 43.89 2.77
1916 2008 7.726033 TCCTAGATTCTACTCAGAAAGCTTT 57.274 36.000 12.53 12.53 43.89 3.51
1917 2009 7.912778 ATCCTAGATTCTACTCAGAAAGCTT 57.087 36.000 0.00 0.00 43.89 3.74
1918 2010 9.427821 TTTATCCTAGATTCTACTCAGAAAGCT 57.572 33.333 0.00 0.00 43.89 3.74
1922 2014 9.575868 ACGATTTATCCTAGATTCTACTCAGAA 57.424 33.333 0.00 0.00 44.77 3.02
1925 2017 9.788889 TGTACGATTTATCCTAGATTCTACTCA 57.211 33.333 0.00 0.00 0.00 3.41
2006 2098 9.800433 TGTCCGACGTAAATACTAAAAATATGA 57.200 29.630 0.00 0.00 0.00 2.15
2052 2144 7.982354 GCAAAGCTTTCTAACTAGAATCTAGGA 59.018 37.037 20.18 6.46 41.52 2.94
2053 2145 7.225734 GGCAAAGCTTTCTAACTAGAATCTAGG 59.774 40.741 20.18 4.26 41.52 3.02
2054 2146 7.766278 TGGCAAAGCTTTCTAACTAGAATCTAG 59.234 37.037 15.25 15.25 41.52 2.43
2055 2147 7.620880 TGGCAAAGCTTTCTAACTAGAATCTA 58.379 34.615 9.23 0.00 41.52 1.98
2056 2148 6.476378 TGGCAAAGCTTTCTAACTAGAATCT 58.524 36.000 9.23 0.00 41.52 2.40
2057 2149 6.743575 TGGCAAAGCTTTCTAACTAGAATC 57.256 37.500 9.23 0.00 41.52 2.52
2058 2150 6.319911 GGATGGCAAAGCTTTCTAACTAGAAT 59.680 38.462 9.23 0.00 41.52 2.40
2059 2151 5.648092 GGATGGCAAAGCTTTCTAACTAGAA 59.352 40.000 9.23 0.00 40.33 2.10
2060 2152 5.045578 AGGATGGCAAAGCTTTCTAACTAGA 60.046 40.000 9.23 0.00 0.00 2.43
2061 2153 5.065731 CAGGATGGCAAAGCTTTCTAACTAG 59.934 44.000 9.23 0.00 0.00 2.57
2062 2154 4.943705 CAGGATGGCAAAGCTTTCTAACTA 59.056 41.667 9.23 0.00 0.00 2.24
2063 2155 3.760684 CAGGATGGCAAAGCTTTCTAACT 59.239 43.478 9.23 0.43 0.00 2.24
2064 2156 3.674410 GCAGGATGGCAAAGCTTTCTAAC 60.674 47.826 9.23 0.45 35.86 2.34
2065 2157 2.493278 GCAGGATGGCAAAGCTTTCTAA 59.507 45.455 9.23 0.00 35.86 2.10
2066 2158 2.094675 GCAGGATGGCAAAGCTTTCTA 58.905 47.619 9.23 3.05 35.86 2.10
2067 2159 0.893447 GCAGGATGGCAAAGCTTTCT 59.107 50.000 9.23 0.00 35.86 2.52
2068 2160 0.604578 TGCAGGATGGCAAAGCTTTC 59.395 50.000 9.23 4.47 41.65 2.62
2069 2161 2.749340 TGCAGGATGGCAAAGCTTT 58.251 47.368 5.69 5.69 41.65 3.51
2070 2162 4.525467 TGCAGGATGGCAAAGCTT 57.475 50.000 0.00 0.00 41.65 3.74
2076 2168 1.284491 TCAAACCTATGCAGGATGGCA 59.716 47.619 0.00 0.00 45.91 4.92
2077 2169 2.057137 TCAAACCTATGCAGGATGGC 57.943 50.000 0.00 0.00 45.91 4.40
2078 2170 3.624777 AGTTCAAACCTATGCAGGATGG 58.375 45.455 0.00 0.00 45.91 3.51
2079 2171 4.701651 TGAAGTTCAAACCTATGCAGGATG 59.298 41.667 2.20 0.00 45.91 3.51
2080 2172 4.922206 TGAAGTTCAAACCTATGCAGGAT 58.078 39.130 2.20 0.00 45.91 3.24
2081 2173 4.365514 TGAAGTTCAAACCTATGCAGGA 57.634 40.909 2.20 0.00 45.91 3.86
2082 2174 4.761739 TCTTGAAGTTCAAACCTATGCAGG 59.238 41.667 18.55 4.16 38.85 4.85
2083 2175 5.947228 TCTTGAAGTTCAAACCTATGCAG 57.053 39.130 18.55 4.64 35.73 4.41
2084 2176 7.611467 ACATATCTTGAAGTTCAAACCTATGCA 59.389 33.333 24.50 0.00 35.73 3.96
2085 2177 7.989826 ACATATCTTGAAGTTCAAACCTATGC 58.010 34.615 24.50 0.00 35.73 3.14
2086 2178 9.994432 GAACATATCTTGAAGTTCAAACCTATG 57.006 33.333 23.76 23.76 39.95 2.23
2087 2179 9.965902 AGAACATATCTTGAAGTTCAAACCTAT 57.034 29.630 18.55 12.24 42.01 2.57
2089 2181 9.965902 ATAGAACATATCTTGAAGTTCAAACCT 57.034 29.630 18.55 9.05 42.01 3.50
2090 2182 9.994432 CATAGAACATATCTTGAAGTTCAAACC 57.006 33.333 18.55 3.35 42.01 3.27
2093 2185 9.166173 CCACATAGAACATATCTTGAAGTTCAA 57.834 33.333 17.16 17.16 42.01 2.69
2094 2186 7.770433 CCCACATAGAACATATCTTGAAGTTCA 59.230 37.037 0.08 0.08 42.01 3.18
2095 2187 7.987458 TCCCACATAGAACATATCTTGAAGTTC 59.013 37.037 0.00 0.00 39.71 3.01
2096 2188 7.861629 TCCCACATAGAACATATCTTGAAGTT 58.138 34.615 0.00 0.00 39.71 2.66
2097 2189 7.345653 TCTCCCACATAGAACATATCTTGAAGT 59.654 37.037 0.00 0.00 39.71 3.01
2098 2190 7.730084 TCTCCCACATAGAACATATCTTGAAG 58.270 38.462 0.00 0.00 39.71 3.02
2099 2191 7.675161 TCTCCCACATAGAACATATCTTGAA 57.325 36.000 0.00 0.00 39.71 2.69
2100 2192 7.675161 TTCTCCCACATAGAACATATCTTGA 57.325 36.000 0.00 0.00 39.71 3.02
2101 2193 6.426328 GCTTCTCCCACATAGAACATATCTTG 59.574 42.308 0.00 0.00 39.71 3.02
2102 2194 6.100279 TGCTTCTCCCACATAGAACATATCTT 59.900 38.462 0.00 0.00 39.71 2.40
2103 2195 5.604231 TGCTTCTCCCACATAGAACATATCT 59.396 40.000 0.00 0.00 42.48 1.98
2104 2196 5.858381 TGCTTCTCCCACATAGAACATATC 58.142 41.667 0.00 0.00 0.00 1.63
2105 2197 5.894298 TGCTTCTCCCACATAGAACATAT 57.106 39.130 0.00 0.00 0.00 1.78
2106 2198 5.692115 TTGCTTCTCCCACATAGAACATA 57.308 39.130 0.00 0.00 0.00 2.29
2107 2199 4.574674 TTGCTTCTCCCACATAGAACAT 57.425 40.909 0.00 0.00 0.00 2.71
2108 2200 4.365514 TTTGCTTCTCCCACATAGAACA 57.634 40.909 0.00 0.00 0.00 3.18
2109 2201 5.705609 TTTTTGCTTCTCCCACATAGAAC 57.294 39.130 0.00 0.00 0.00 3.01
2140 2232 8.653338 GCGACACAACTAAGTTTCTATATGAAA 58.347 33.333 0.00 0.00 41.85 2.69
2141 2233 7.815549 TGCGACACAACTAAGTTTCTATATGAA 59.184 33.333 0.00 0.00 0.00 2.57
2142 2234 7.274904 GTGCGACACAACTAAGTTTCTATATGA 59.725 37.037 5.30 0.00 34.08 2.15
2143 2235 7.391786 GTGCGACACAACTAAGTTTCTATATG 58.608 38.462 5.30 0.00 34.08 1.78
2144 2236 6.534079 GGTGCGACACAACTAAGTTTCTATAT 59.466 38.462 11.20 0.00 35.86 0.86
2145 2237 5.865552 GGTGCGACACAACTAAGTTTCTATA 59.134 40.000 11.20 0.00 35.86 1.31
2146 2238 4.689345 GGTGCGACACAACTAAGTTTCTAT 59.311 41.667 11.20 0.00 35.86 1.98
2147 2239 4.053295 GGTGCGACACAACTAAGTTTCTA 58.947 43.478 11.20 0.00 35.86 2.10
2148 2240 2.870411 GGTGCGACACAACTAAGTTTCT 59.130 45.455 11.20 0.00 35.86 2.52
2149 2241 2.348218 CGGTGCGACACAACTAAGTTTC 60.348 50.000 11.20 0.00 35.86 2.78
2150 2242 1.595794 CGGTGCGACACAACTAAGTTT 59.404 47.619 11.20 0.00 35.86 2.66
2151 2243 1.202440 TCGGTGCGACACAACTAAGTT 60.202 47.619 11.20 0.00 35.86 2.66
2152 2244 0.386476 TCGGTGCGACACAACTAAGT 59.614 50.000 11.20 0.00 35.86 2.24
2153 2245 1.654105 GATCGGTGCGACACAACTAAG 59.346 52.381 11.20 0.00 39.18 2.18
2154 2246 1.271379 AGATCGGTGCGACACAACTAA 59.729 47.619 11.20 0.00 39.18 2.24
2155 2247 0.885879 AGATCGGTGCGACACAACTA 59.114 50.000 11.20 0.00 39.18 2.24
2156 2248 0.033504 AAGATCGGTGCGACACAACT 59.966 50.000 11.20 3.29 39.18 3.16
2157 2249 1.705256 TAAGATCGGTGCGACACAAC 58.295 50.000 11.20 0.00 39.18 3.32
2158 2250 2.442212 TTAAGATCGGTGCGACACAA 57.558 45.000 11.20 0.95 39.18 3.33
2159 2251 2.333926 CTTTAAGATCGGTGCGACACA 58.666 47.619 11.20 0.00 39.18 3.72
2160 2252 1.060698 GCTTTAAGATCGGTGCGACAC 59.939 52.381 0.00 1.92 39.18 3.67
2161 2253 1.355971 GCTTTAAGATCGGTGCGACA 58.644 50.000 0.00 0.00 39.18 4.35
2162 2254 0.297820 CGCTTTAAGATCGGTGCGAC 59.702 55.000 13.30 0.00 45.15 5.19
2163 2255 2.660944 CGCTTTAAGATCGGTGCGA 58.339 52.632 13.30 0.00 45.15 5.10
2164 2256 1.209128 ATCGCTTTAAGATCGGTGCG 58.791 50.000 12.68 12.68 43.95 5.34
2165 2257 4.447724 TCAATATCGCTTTAAGATCGGTGC 59.552 41.667 0.00 0.00 0.00 5.01
2166 2258 6.420903 TCTTCAATATCGCTTTAAGATCGGTG 59.579 38.462 0.00 0.00 0.00 4.94
2167 2259 6.513180 TCTTCAATATCGCTTTAAGATCGGT 58.487 36.000 0.00 0.00 0.00 4.69
2168 2260 6.090088 CCTCTTCAATATCGCTTTAAGATCGG 59.910 42.308 0.00 0.00 0.00 4.18
2169 2261 6.642950 ACCTCTTCAATATCGCTTTAAGATCG 59.357 38.462 0.00 0.00 0.00 3.69
2170 2262 7.954788 ACCTCTTCAATATCGCTTTAAGATC 57.045 36.000 0.00 0.00 0.00 2.75
2171 2263 8.091449 CCTACCTCTTCAATATCGCTTTAAGAT 58.909 37.037 0.00 0.00 0.00 2.40
2172 2264 7.287005 TCCTACCTCTTCAATATCGCTTTAAGA 59.713 37.037 0.00 0.00 0.00 2.10
2173 2265 7.434492 TCCTACCTCTTCAATATCGCTTTAAG 58.566 38.462 0.00 0.00 0.00 1.85
2174 2266 7.356089 TCCTACCTCTTCAATATCGCTTTAA 57.644 36.000 0.00 0.00 0.00 1.52
2175 2267 6.971726 TCCTACCTCTTCAATATCGCTTTA 57.028 37.500 0.00 0.00 0.00 1.85
2176 2268 5.871396 TCCTACCTCTTCAATATCGCTTT 57.129 39.130 0.00 0.00 0.00 3.51
2177 2269 6.350612 GCTATCCTACCTCTTCAATATCGCTT 60.351 42.308 0.00 0.00 0.00 4.68
2178 2270 5.126384 GCTATCCTACCTCTTCAATATCGCT 59.874 44.000 0.00 0.00 0.00 4.93
2179 2271 5.105716 TGCTATCCTACCTCTTCAATATCGC 60.106 44.000 0.00 0.00 0.00 4.58
2180 2272 6.405286 CCTGCTATCCTACCTCTTCAATATCG 60.405 46.154 0.00 0.00 0.00 2.92
2181 2273 6.127196 CCCTGCTATCCTACCTCTTCAATATC 60.127 46.154 0.00 0.00 0.00 1.63
2182 2274 5.723887 CCCTGCTATCCTACCTCTTCAATAT 59.276 44.000 0.00 0.00 0.00 1.28
2183 2275 5.087323 CCCTGCTATCCTACCTCTTCAATA 58.913 45.833 0.00 0.00 0.00 1.90
2184 2276 3.906846 CCCTGCTATCCTACCTCTTCAAT 59.093 47.826 0.00 0.00 0.00 2.57
2185 2277 3.309296 CCCTGCTATCCTACCTCTTCAA 58.691 50.000 0.00 0.00 0.00 2.69
2186 2278 2.964209 CCCTGCTATCCTACCTCTTCA 58.036 52.381 0.00 0.00 0.00 3.02
2187 2279 1.621317 GCCCTGCTATCCTACCTCTTC 59.379 57.143 0.00 0.00 0.00 2.87
2188 2280 1.723288 GCCCTGCTATCCTACCTCTT 58.277 55.000 0.00 0.00 0.00 2.85
2189 2281 0.178918 GGCCCTGCTATCCTACCTCT 60.179 60.000 0.00 0.00 0.00 3.69
2190 2282 0.178918 AGGCCCTGCTATCCTACCTC 60.179 60.000 0.00 0.00 0.00 3.85
2191 2283 0.472734 CAGGCCCTGCTATCCTACCT 60.473 60.000 0.00 0.00 0.00 3.08
2192 2284 1.484444 CCAGGCCCTGCTATCCTACC 61.484 65.000 4.81 0.00 0.00 3.18
2193 2285 1.484444 CCCAGGCCCTGCTATCCTAC 61.484 65.000 4.81 0.00 0.00 3.18
2194 2286 1.152030 CCCAGGCCCTGCTATCCTA 60.152 63.158 4.81 0.00 0.00 2.94
2195 2287 2.449322 CCCAGGCCCTGCTATCCT 60.449 66.667 4.81 0.00 0.00 3.24
2196 2288 2.774351 ACCCAGGCCCTGCTATCC 60.774 66.667 4.81 0.00 0.00 2.59
2197 2289 2.512896 CACCCAGGCCCTGCTATC 59.487 66.667 4.81 0.00 0.00 2.08
2198 2290 3.813724 GCACCCAGGCCCTGCTAT 61.814 66.667 4.81 0.00 0.00 2.97
2202 2294 4.290622 ACTTGCACCCAGGCCCTG 62.291 66.667 2.91 2.91 0.00 4.45
2203 2295 4.290622 CACTTGCACCCAGGCCCT 62.291 66.667 0.00 0.00 0.00 5.19
2205 2297 4.982701 AGCACTTGCACCCAGGCC 62.983 66.667 3.62 0.00 45.16 5.19
2206 2298 2.469465 TAGAGCACTTGCACCCAGGC 62.469 60.000 3.62 0.00 45.16 4.85
2207 2299 0.036732 TTAGAGCACTTGCACCCAGG 59.963 55.000 3.62 0.00 45.16 4.45
2208 2300 1.896220 TTTAGAGCACTTGCACCCAG 58.104 50.000 3.62 0.00 45.16 4.45
2209 2301 2.356665 TTTTAGAGCACTTGCACCCA 57.643 45.000 3.62 0.00 45.16 4.51
2210 2302 3.367395 GGATTTTTAGAGCACTTGCACCC 60.367 47.826 3.62 0.00 45.16 4.61
2211 2303 3.255642 TGGATTTTTAGAGCACTTGCACC 59.744 43.478 3.62 0.00 45.16 5.01
2212 2304 4.229876 GTGGATTTTTAGAGCACTTGCAC 58.770 43.478 3.62 0.00 45.16 4.57
2213 2305 3.058293 CGTGGATTTTTAGAGCACTTGCA 60.058 43.478 3.62 0.00 45.16 4.08
2214 2306 3.058224 ACGTGGATTTTTAGAGCACTTGC 60.058 43.478 0.00 0.00 42.49 4.01
2215 2307 4.378459 GGACGTGGATTTTTAGAGCACTTG 60.378 45.833 0.00 0.00 0.00 3.16
2216 2308 3.751698 GGACGTGGATTTTTAGAGCACTT 59.248 43.478 0.00 0.00 0.00 3.16
2217 2309 3.335579 GGACGTGGATTTTTAGAGCACT 58.664 45.455 0.00 0.00 0.00 4.40
2218 2310 2.093783 CGGACGTGGATTTTTAGAGCAC 59.906 50.000 0.00 0.00 0.00 4.40
2219 2311 2.289195 ACGGACGTGGATTTTTAGAGCA 60.289 45.455 0.00 0.00 0.00 4.26
2220 2312 2.344025 ACGGACGTGGATTTTTAGAGC 58.656 47.619 0.00 0.00 0.00 4.09
2221 2313 2.928116 GGACGGACGTGGATTTTTAGAG 59.072 50.000 0.53 0.00 0.00 2.43
2222 2314 2.299582 TGGACGGACGTGGATTTTTAGA 59.700 45.455 0.53 0.00 0.00 2.10
2223 2315 2.690786 TGGACGGACGTGGATTTTTAG 58.309 47.619 0.53 0.00 0.00 1.85
2224 2316 2.835580 TGGACGGACGTGGATTTTTA 57.164 45.000 0.53 0.00 0.00 1.52
2225 2317 1.810151 CATGGACGGACGTGGATTTTT 59.190 47.619 0.53 0.00 0.00 1.94
2226 2318 1.271163 ACATGGACGGACGTGGATTTT 60.271 47.619 0.53 0.00 0.00 1.82
2227 2319 0.323629 ACATGGACGGACGTGGATTT 59.676 50.000 0.53 0.00 0.00 2.17
2228 2320 1.136305 CTACATGGACGGACGTGGATT 59.864 52.381 0.53 0.00 0.00 3.01
2229 2321 0.744874 CTACATGGACGGACGTGGAT 59.255 55.000 0.53 0.00 0.00 3.41
2230 2322 0.609957 ACTACATGGACGGACGTGGA 60.610 55.000 0.53 0.00 0.00 4.02
2231 2323 0.457853 CACTACATGGACGGACGTGG 60.458 60.000 0.53 0.00 0.00 4.94
2232 2324 1.076533 GCACTACATGGACGGACGTG 61.077 60.000 0.53 0.00 0.00 4.49
2233 2325 1.214589 GCACTACATGGACGGACGT 59.785 57.895 0.00 0.00 0.00 4.34
2234 2326 0.179111 ATGCACTACATGGACGGACG 60.179 55.000 0.00 0.00 37.70 4.79
2235 2327 3.760693 ATGCACTACATGGACGGAC 57.239 52.632 0.00 0.00 37.70 4.79
2258 2350 4.811024 TGCGAACTTGATATCTTCATGGAC 59.189 41.667 3.98 0.00 34.58 4.02
2322 2414 7.092846 CGGAGTTAGATTTAGGGGATGGATTAT 60.093 40.741 0.00 0.00 0.00 1.28
2441 2534 3.284449 GGCGTTTTGAGGGTGCGT 61.284 61.111 0.00 0.00 0.00 5.24
2444 2537 4.038080 GCGGGCGTTTTGAGGGTG 62.038 66.667 0.00 0.00 0.00 4.61
2484 2577 2.707902 GGATGGATTCCAGCGTTCC 58.292 57.895 14.46 10.62 41.37 3.62
2559 2652 1.610522 AGCTCATTTTGCTTTGCGTCT 59.389 42.857 0.00 0.00 37.52 4.18
2569 2662 0.037975 AGCCCGCAAAGCTCATTTTG 60.038 50.000 0.00 0.00 34.91 2.44
2571 2664 0.244721 GAAGCCCGCAAAGCTCATTT 59.755 50.000 0.00 0.00 40.49 2.32
2573 2666 1.001641 AGAAGCCCGCAAAGCTCAT 60.002 52.632 0.00 0.00 40.49 2.90
2581 2674 4.704833 GCTGTCCAGAAGCCCGCA 62.705 66.667 0.00 0.00 34.45 5.69
2588 2681 1.116536 TACGTGGTGGCTGTCCAGAA 61.117 55.000 0.00 0.00 44.48 3.02
2591 2684 2.738480 GTACGTGGTGGCTGTCCA 59.262 61.111 0.00 0.00 40.85 4.02
2596 2689 1.317431 TAGATGCGTACGTGGTGGCT 61.317 55.000 17.90 8.49 0.00 4.75
2611 2704 2.422945 GGGAGGAATTTGGCGGTTAGAT 60.423 50.000 0.00 0.00 0.00 1.98
2612 2705 1.064979 GGGAGGAATTTGGCGGTTAGA 60.065 52.381 0.00 0.00 0.00 2.10
2626 2719 2.505819 GCTGAGAGTATTTTGGGGAGGA 59.494 50.000 0.00 0.00 0.00 3.71


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.