Multiple sequence alignment - TraesCS4A01G468300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G468300 chr4A 100.000 4474 0 0 1 4474 730115199 730110726 0.000000e+00 8263.0
1 TraesCS4A01G468300 chr4A 90.229 2180 182 11 1180 3334 729637558 729639731 0.000000e+00 2817.0
2 TraesCS4A01G468300 chr4A 88.370 2227 227 13 1130 3332 731407835 731410053 0.000000e+00 2649.0
3 TraesCS4A01G468300 chr4A 81.727 1992 287 45 1375 3332 728501218 728499270 0.000000e+00 1591.0
4 TraesCS4A01G468300 chr4A 80.608 954 163 18 3530 4472 671634526 671635468 0.000000e+00 717.0
5 TraesCS4A01G468300 chr4A 86.972 568 67 6 569 1131 731407238 731407803 2.270000e-177 632.0
6 TraesCS4A01G468300 chr4A 79.271 439 89 2 2896 3333 723515612 723515175 5.620000e-79 305.0
7 TraesCS4A01G468300 chr7D 95.532 2216 86 6 1130 3332 9310501 9312716 0.000000e+00 3531.0
8 TraesCS4A01G468300 chr7D 88.600 2228 223 12 1130 3333 8346606 8344386 0.000000e+00 2678.0
9 TraesCS4A01G468300 chr7D 81.595 1994 286 48 1375 3332 10498638 10496690 0.000000e+00 1574.0
10 TraesCS4A01G468300 chr7D 88.112 572 59 6 568 1133 9309903 9310471 0.000000e+00 671.0
11 TraesCS4A01G468300 chr7D 86.525 564 71 4 572 1131 8347200 8346638 2.290000e-172 616.0
12 TraesCS4A01G468300 chr7D 95.349 43 2 0 586 628 2408611 2408653 8.030000e-08 69.4
13 TraesCS4A01G468300 chr7D 95.349 43 2 0 586 628 3858483 3858441 8.030000e-08 69.4
14 TraesCS4A01G468300 chr7A 91.153 2159 175 9 1189 3332 8780105 8777948 0.000000e+00 2915.0
15 TraesCS4A01G468300 chr7A 86.625 1600 183 17 1179 2750 9009110 9010706 0.000000e+00 1740.0
16 TraesCS4A01G468300 chr7A 88.660 582 62 2 2754 3334 9011895 9012473 0.000000e+00 706.0
17 TraesCS4A01G468300 chr7A 88.792 571 57 6 568 1133 8780749 8780181 0.000000e+00 693.0
18 TraesCS4A01G468300 chr7A 81.982 555 88 10 568 1113 9008468 9009019 1.130000e-125 460.0
19 TraesCS4A01G468300 chr7A 70.492 732 160 35 1380 2080 3413614 3414320 2.200000e-18 104.0
20 TraesCS4A01G468300 chr7A 95.349 43 2 0 586 628 3779816 3779858 8.030000e-08 69.4
21 TraesCS4A01G468300 chr2D 85.719 2808 337 39 568 3333 603208524 603211309 0.000000e+00 2905.0
22 TraesCS4A01G468300 chr2D 89.833 1141 110 4 3339 4474 125497335 125498474 0.000000e+00 1459.0
23 TraesCS4A01G468300 chr2D 90.613 799 63 5 3338 4135 36195494 36194707 0.000000e+00 1050.0
24 TraesCS4A01G468300 chr1A 95.255 1138 52 2 3338 4474 585216533 585215397 0.000000e+00 1801.0
25 TraesCS4A01G468300 chr1A 94.487 1034 49 4 3443 4474 4844538 4843511 0.000000e+00 1587.0
26 TraesCS4A01G468300 chr5B 90.981 1142 97 3 3338 4474 612302066 612300926 0.000000e+00 1533.0
27 TraesCS4A01G468300 chr5B 80.248 967 167 20 3516 4472 266508879 266509831 0.000000e+00 706.0
28 TraesCS4A01G468300 chr5B 90.578 467 38 4 107 567 34912068 34911602 8.230000e-172 614.0
29 TraesCS4A01G468300 chr2B 96.892 740 21 1 3735 4474 780037428 780038165 0.000000e+00 1238.0
30 TraesCS4A01G468300 chr2B 92.146 713 52 2 3759 4471 178792909 178793617 0.000000e+00 1003.0
31 TraesCS4A01G468300 chr2B 96.011 351 12 2 3338 3687 780037082 780037431 1.810000e-158 569.0
32 TraesCS4A01G468300 chr1D 91.228 456 37 3 105 559 2688029 2688482 6.360000e-173 617.0
33 TraesCS4A01G468300 chr1D 89.849 463 45 2 106 567 2486930 2487391 1.070000e-165 593.0
34 TraesCS4A01G468300 chr1D 74.229 1362 258 60 1381 2691 456653482 456654801 6.730000e-133 484.0
35 TraesCS4A01G468300 chr3D 90.150 467 40 5 105 567 562374601 562375065 1.780000e-168 603.0
36 TraesCS4A01G468300 chr3B 91.216 444 36 3 121 563 820863928 820864369 6.400000e-168 601.0
37 TraesCS4A01G468300 chr3B 89.914 466 40 6 105 567 749676415 749676876 1.070000e-165 593.0
38 TraesCS4A01G468300 chr5A 89.417 463 44 5 105 563 554561471 554561010 3.000000e-161 579.0
39 TraesCS4A01G468300 chr2A 89.565 460 38 9 105 559 739469985 739469531 3.880000e-160 575.0
40 TraesCS4A01G468300 chr2A 89.177 462 47 3 104 563 54138809 54139269 1.400000e-159 573.0
41 TraesCS4A01G468300 chr5D 75.896 502 77 23 1380 1853 29568508 29568023 2.710000e-52 217.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G468300 chr4A 730110726 730115199 4473 True 8263.000000 8263 100.000000 1 4474 1 chr4A.!!$R3 4473
1 TraesCS4A01G468300 chr4A 729637558 729639731 2173 False 2817.000000 2817 90.229000 1180 3334 1 chr4A.!!$F2 2154
2 TraesCS4A01G468300 chr4A 731407238 731410053 2815 False 1640.500000 2649 87.671000 569 3332 2 chr4A.!!$F3 2763
3 TraesCS4A01G468300 chr4A 728499270 728501218 1948 True 1591.000000 1591 81.727000 1375 3332 1 chr4A.!!$R2 1957
4 TraesCS4A01G468300 chr4A 671634526 671635468 942 False 717.000000 717 80.608000 3530 4472 1 chr4A.!!$F1 942
5 TraesCS4A01G468300 chr7D 9309903 9312716 2813 False 2101.000000 3531 91.822000 568 3332 2 chr7D.!!$F2 2764
6 TraesCS4A01G468300 chr7D 8344386 8347200 2814 True 1647.000000 2678 87.562500 572 3333 2 chr7D.!!$R3 2761
7 TraesCS4A01G468300 chr7D 10496690 10498638 1948 True 1574.000000 1574 81.595000 1375 3332 1 chr7D.!!$R2 1957
8 TraesCS4A01G468300 chr7A 8777948 8780749 2801 True 1804.000000 2915 89.972500 568 3332 2 chr7A.!!$R1 2764
9 TraesCS4A01G468300 chr7A 9008468 9012473 4005 False 968.666667 1740 85.755667 568 3334 3 chr7A.!!$F3 2766
10 TraesCS4A01G468300 chr2D 603208524 603211309 2785 False 2905.000000 2905 85.719000 568 3333 1 chr2D.!!$F2 2765
11 TraesCS4A01G468300 chr2D 125497335 125498474 1139 False 1459.000000 1459 89.833000 3339 4474 1 chr2D.!!$F1 1135
12 TraesCS4A01G468300 chr2D 36194707 36195494 787 True 1050.000000 1050 90.613000 3338 4135 1 chr2D.!!$R1 797
13 TraesCS4A01G468300 chr1A 585215397 585216533 1136 True 1801.000000 1801 95.255000 3338 4474 1 chr1A.!!$R2 1136
14 TraesCS4A01G468300 chr1A 4843511 4844538 1027 True 1587.000000 1587 94.487000 3443 4474 1 chr1A.!!$R1 1031
15 TraesCS4A01G468300 chr5B 612300926 612302066 1140 True 1533.000000 1533 90.981000 3338 4474 1 chr5B.!!$R2 1136
16 TraesCS4A01G468300 chr5B 266508879 266509831 952 False 706.000000 706 80.248000 3516 4472 1 chr5B.!!$F1 956
17 TraesCS4A01G468300 chr2B 178792909 178793617 708 False 1003.000000 1003 92.146000 3759 4471 1 chr2B.!!$F1 712
18 TraesCS4A01G468300 chr2B 780037082 780038165 1083 False 903.500000 1238 96.451500 3338 4474 2 chr2B.!!$F2 1136
19 TraesCS4A01G468300 chr1D 456653482 456654801 1319 False 484.000000 484 74.229000 1381 2691 1 chr1D.!!$F3 1310

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
181 182 0.027194 CGCATCAAGATCCGTGCAAG 59.973 55.0 0.0 0.0 37.44 4.01 F
1415 1504 0.101219 TCGATGACATGCGGACAGAG 59.899 55.0 0.0 0.0 0.00 3.35 F
2141 2263 0.104882 TAACTCCCTCACACCCACCA 60.105 55.0 0.0 0.0 0.00 4.17 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2124 2246 0.991355 TTTGGTGGGTGTGAGGGAGT 60.991 55.0 0.00 0.00 0.00 3.85 R
2626 2769 0.960364 GAGCCGTGCAAATCCTTGGA 60.960 55.0 0.00 0.00 32.76 3.53 R
3882 5228 0.888619 CTTGACGTCTCTACTGGCCA 59.111 55.0 17.92 4.71 0.00 5.36 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 4.720902 CACAGGTGGCGCCATGGA 62.721 66.667 35.23 6.15 40.61 3.41
19 20 3.965258 ACAGGTGGCGCCATGGAA 61.965 61.111 35.23 5.65 40.61 3.53
20 21 3.136123 CAGGTGGCGCCATGGAAG 61.136 66.667 35.23 17.12 40.61 3.46
21 22 3.650950 AGGTGGCGCCATGGAAGT 61.651 61.111 35.23 10.89 40.61 3.01
22 23 3.134127 GGTGGCGCCATGGAAGTC 61.134 66.667 35.23 17.85 37.17 3.01
23 24 2.045926 GTGGCGCCATGGAAGTCT 60.046 61.111 35.23 0.00 0.00 3.24
24 25 1.220749 GTGGCGCCATGGAAGTCTA 59.779 57.895 35.23 0.86 0.00 2.59
25 26 1.090052 GTGGCGCCATGGAAGTCTAC 61.090 60.000 35.23 11.91 0.00 2.59
26 27 1.220749 GGCGCCATGGAAGTCTACA 59.779 57.895 24.80 0.00 0.00 2.74
27 28 0.392461 GGCGCCATGGAAGTCTACAA 60.392 55.000 24.80 0.00 0.00 2.41
28 29 1.009829 GCGCCATGGAAGTCTACAAG 58.990 55.000 18.40 0.00 0.00 3.16
29 30 1.656652 CGCCATGGAAGTCTACAAGG 58.343 55.000 18.40 0.00 0.00 3.61
30 31 1.383523 GCCATGGAAGTCTACAAGGC 58.616 55.000 18.40 7.65 43.11 4.35
31 32 2.787473 CCATGGAAGTCTACAAGGCA 57.213 50.000 5.56 0.00 0.00 4.75
32 33 3.287867 CCATGGAAGTCTACAAGGCAT 57.712 47.619 5.56 0.00 0.00 4.40
33 34 4.422073 CCATGGAAGTCTACAAGGCATA 57.578 45.455 5.56 0.00 0.00 3.14
34 35 4.130118 CCATGGAAGTCTACAAGGCATAC 58.870 47.826 5.56 0.00 0.00 2.39
35 36 3.520290 TGGAAGTCTACAAGGCATACG 57.480 47.619 0.00 0.00 0.00 3.06
36 37 2.167693 TGGAAGTCTACAAGGCATACGG 59.832 50.000 0.00 0.00 0.00 4.02
37 38 2.202566 GAAGTCTACAAGGCATACGGC 58.797 52.381 0.00 0.00 43.74 5.68
61 62 3.393970 CGCAGCCTTCAGGGAGGA 61.394 66.667 0.00 0.00 39.25 3.71
62 63 2.588989 GCAGCCTTCAGGGAGGAG 59.411 66.667 0.00 0.00 39.25 3.69
63 64 2.588989 CAGCCTTCAGGGAGGAGC 59.411 66.667 0.00 0.00 39.25 4.70
64 65 3.080121 AGCCTTCAGGGAGGAGCG 61.080 66.667 0.00 0.00 39.25 5.03
65 66 4.847444 GCCTTCAGGGAGGAGCGC 62.847 72.222 0.00 0.00 39.25 5.92
66 67 4.168291 CCTTCAGGGAGGAGCGCC 62.168 72.222 2.29 0.00 39.25 6.53
67 68 4.521062 CTTCAGGGAGGAGCGCCG 62.521 72.222 2.29 0.00 39.96 6.46
72 73 4.821589 GGGAGGAGCGCCGAGTTG 62.822 72.222 2.29 0.00 39.96 3.16
73 74 4.070552 GGAGGAGCGCCGAGTTGT 62.071 66.667 2.29 0.00 39.96 3.32
74 75 2.507324 GAGGAGCGCCGAGTTGTC 60.507 66.667 2.29 0.00 39.96 3.18
75 76 2.992114 AGGAGCGCCGAGTTGTCT 60.992 61.111 2.29 0.00 39.96 3.41
76 77 2.507324 GGAGCGCCGAGTTGTCTC 60.507 66.667 2.29 0.00 37.35 3.36
77 78 2.507324 GAGCGCCGAGTTGTCTCC 60.507 66.667 2.29 0.00 37.40 3.71
78 79 3.282745 GAGCGCCGAGTTGTCTCCA 62.283 63.158 2.29 0.00 37.40 3.86
79 80 2.811317 GCGCCGAGTTGTCTCCAG 60.811 66.667 0.00 0.00 37.40 3.86
80 81 2.651361 CGCCGAGTTGTCTCCAGT 59.349 61.111 0.00 0.00 37.40 4.00
81 82 1.734477 CGCCGAGTTGTCTCCAGTG 60.734 63.158 0.00 0.00 37.40 3.66
82 83 2.029844 GCCGAGTTGTCTCCAGTGC 61.030 63.158 0.00 0.00 37.40 4.40
83 84 1.668294 CCGAGTTGTCTCCAGTGCT 59.332 57.895 0.00 0.00 37.40 4.40
84 85 0.668706 CCGAGTTGTCTCCAGTGCTG 60.669 60.000 0.00 0.00 37.40 4.41
106 107 4.148645 CAGAGAGCGCGTCGACGA 62.149 66.667 39.74 0.00 43.02 4.20
107 108 3.420606 AGAGAGCGCGTCGACGAA 61.421 61.111 39.74 0.00 43.02 3.85
108 109 2.501222 GAGAGCGCGTCGACGAAA 60.501 61.111 39.74 0.00 43.02 3.46
109 110 2.050714 AGAGCGCGTCGACGAAAA 60.051 55.556 39.74 0.00 43.02 2.29
110 111 1.403972 GAGAGCGCGTCGACGAAAAT 61.404 55.000 39.74 21.86 43.02 1.82
111 112 0.179181 AGAGCGCGTCGACGAAAATA 60.179 50.000 39.74 0.00 43.02 1.40
112 113 0.844503 GAGCGCGTCGACGAAAATAT 59.155 50.000 39.74 18.65 43.02 1.28
113 114 2.039085 GAGCGCGTCGACGAAAATATA 58.961 47.619 39.74 0.00 43.02 0.86
114 115 2.655474 GAGCGCGTCGACGAAAATATAT 59.345 45.455 39.74 16.04 43.02 0.86
115 116 3.047796 AGCGCGTCGACGAAAATATATT 58.952 40.909 39.74 11.72 43.02 1.28
116 117 3.488310 AGCGCGTCGACGAAAATATATTT 59.512 39.130 39.74 4.81 43.02 1.40
117 118 4.026310 AGCGCGTCGACGAAAATATATTTT 60.026 37.500 39.74 20.77 42.24 1.82
118 119 4.083345 GCGCGTCGACGAAAATATATTTTG 59.917 41.667 39.74 18.41 39.86 2.44
119 120 4.601522 CGCGTCGACGAAAATATATTTTGG 59.398 41.667 39.74 24.03 39.86 3.28
120 121 5.554883 CGCGTCGACGAAAATATATTTTGGA 60.555 40.000 39.74 17.37 39.86 3.53
121 122 5.839239 GCGTCGACGAAAATATATTTTGGAG 59.161 40.000 39.74 22.71 39.86 3.86
122 123 5.839239 CGTCGACGAAAATATATTTTGGAGC 59.161 40.000 33.35 20.92 39.86 4.70
123 124 6.508880 CGTCGACGAAAATATATTTTGGAGCA 60.509 38.462 33.35 14.76 39.86 4.26
124 125 6.627671 GTCGACGAAAATATATTTTGGAGCAC 59.372 38.462 28.91 19.77 39.86 4.40
125 126 5.907391 CGACGAAAATATATTTTGGAGCACC 59.093 40.000 28.91 13.68 39.86 5.01
126 127 6.238374 CGACGAAAATATATTTTGGAGCACCT 60.238 38.462 28.91 12.99 39.86 4.00
127 128 7.042321 CGACGAAAATATATTTTGGAGCACCTA 60.042 37.037 28.91 0.00 39.86 3.08
128 129 7.927048 ACGAAAATATATTTTGGAGCACCTAC 58.073 34.615 28.91 12.04 39.86 3.18
129 130 7.554835 ACGAAAATATATTTTGGAGCACCTACA 59.445 33.333 28.91 0.00 39.86 2.74
130 131 7.855904 CGAAAATATATTTTGGAGCACCTACAC 59.144 37.037 24.60 7.50 39.86 2.90
131 132 7.582667 AAATATATTTTGGAGCACCTACACC 57.417 36.000 4.81 0.00 37.04 4.16
132 133 2.215942 ATTTTGGAGCACCTACACCC 57.784 50.000 0.71 0.00 37.04 4.61
133 134 0.847373 TTTTGGAGCACCTACACCCA 59.153 50.000 0.71 0.00 37.04 4.51
134 135 0.400213 TTTGGAGCACCTACACCCAG 59.600 55.000 0.71 0.00 37.04 4.45
135 136 1.488705 TTGGAGCACCTACACCCAGG 61.489 60.000 0.71 0.00 41.87 4.45
136 137 2.269241 GAGCACCTACACCCAGGC 59.731 66.667 0.00 0.00 39.53 4.85
137 138 3.330720 AGCACCTACACCCAGGCC 61.331 66.667 0.00 0.00 39.53 5.19
138 139 4.426313 GCACCTACACCCAGGCCC 62.426 72.222 0.00 0.00 39.53 5.80
139 140 3.728373 CACCTACACCCAGGCCCC 61.728 72.222 0.00 0.00 39.53 5.80
140 141 3.954981 ACCTACACCCAGGCCCCT 61.955 66.667 0.00 0.00 39.53 4.79
141 142 3.090532 CCTACACCCAGGCCCCTC 61.091 72.222 0.00 0.00 0.00 4.30
142 143 2.041265 CTACACCCAGGCCCCTCT 59.959 66.667 0.00 0.00 0.00 3.69
143 144 1.616628 CTACACCCAGGCCCCTCTT 60.617 63.158 0.00 0.00 0.00 2.85
144 145 0.326238 CTACACCCAGGCCCCTCTTA 60.326 60.000 0.00 0.00 0.00 2.10
145 146 0.345502 TACACCCAGGCCCCTCTTAT 59.654 55.000 0.00 0.00 0.00 1.73
146 147 0.988678 ACACCCAGGCCCCTCTTATC 60.989 60.000 0.00 0.00 0.00 1.75
147 148 0.695803 CACCCAGGCCCCTCTTATCT 60.696 60.000 0.00 0.00 0.00 1.98
148 149 0.949582 ACCCAGGCCCCTCTTATCTA 59.050 55.000 0.00 0.00 0.00 1.98
149 150 1.132689 ACCCAGGCCCCTCTTATCTAG 60.133 57.143 0.00 0.00 0.00 2.43
150 151 0.980423 CCAGGCCCCTCTTATCTAGC 59.020 60.000 0.00 0.00 0.00 3.42
151 152 0.980423 CAGGCCCCTCTTATCTAGCC 59.020 60.000 0.00 0.00 40.79 3.93
152 153 0.568192 AGGCCCCTCTTATCTAGCCA 59.432 55.000 0.00 0.00 42.97 4.75
153 154 1.153132 AGGCCCCTCTTATCTAGCCAT 59.847 52.381 0.00 0.00 42.97 4.40
154 155 1.557371 GGCCCCTCTTATCTAGCCATC 59.443 57.143 0.00 0.00 40.20 3.51
155 156 1.557371 GCCCCTCTTATCTAGCCATCC 59.443 57.143 0.00 0.00 0.00 3.51
156 157 2.907892 CCCCTCTTATCTAGCCATCCA 58.092 52.381 0.00 0.00 0.00 3.41
157 158 3.458831 CCCCTCTTATCTAGCCATCCAT 58.541 50.000 0.00 0.00 0.00 3.41
158 159 3.848975 CCCCTCTTATCTAGCCATCCATT 59.151 47.826 0.00 0.00 0.00 3.16
159 160 4.080638 CCCCTCTTATCTAGCCATCCATTC 60.081 50.000 0.00 0.00 0.00 2.67
160 161 4.782156 CCCTCTTATCTAGCCATCCATTCT 59.218 45.833 0.00 0.00 0.00 2.40
161 162 5.338219 CCCTCTTATCTAGCCATCCATTCTG 60.338 48.000 0.00 0.00 0.00 3.02
162 163 5.157940 TCTTATCTAGCCATCCATTCTGC 57.842 43.478 0.00 0.00 0.00 4.26
163 164 2.469274 ATCTAGCCATCCATTCTGCG 57.531 50.000 0.00 0.00 0.00 5.18
164 165 0.250038 TCTAGCCATCCATTCTGCGC 60.250 55.000 0.00 0.00 0.00 6.09
165 166 0.533531 CTAGCCATCCATTCTGCGCA 60.534 55.000 10.98 10.98 0.00 6.09
166 167 0.109153 TAGCCATCCATTCTGCGCAT 59.891 50.000 12.24 0.00 0.00 4.73
167 168 1.170919 AGCCATCCATTCTGCGCATC 61.171 55.000 12.24 0.00 0.00 3.91
168 169 1.449726 GCCATCCATTCTGCGCATCA 61.450 55.000 12.24 0.00 0.00 3.07
169 170 1.026584 CCATCCATTCTGCGCATCAA 58.973 50.000 12.24 7.58 0.00 2.57
170 171 1.001706 CCATCCATTCTGCGCATCAAG 60.002 52.381 12.24 0.00 0.00 3.02
171 172 1.944709 CATCCATTCTGCGCATCAAGA 59.055 47.619 12.24 0.46 0.00 3.02
172 173 2.336945 TCCATTCTGCGCATCAAGAT 57.663 45.000 12.24 0.00 0.00 2.40
173 174 2.216046 TCCATTCTGCGCATCAAGATC 58.784 47.619 12.24 0.00 0.00 2.75
174 175 1.266175 CCATTCTGCGCATCAAGATCC 59.734 52.381 12.24 0.00 0.00 3.36
175 176 1.070108 CATTCTGCGCATCAAGATCCG 60.070 52.381 12.24 0.00 0.00 4.18
176 177 0.108186 TTCTGCGCATCAAGATCCGT 60.108 50.000 12.24 0.00 0.00 4.69
177 178 0.807275 TCTGCGCATCAAGATCCGTG 60.807 55.000 12.24 0.00 0.00 4.94
178 179 2.325857 GCGCATCAAGATCCGTGC 59.674 61.111 0.30 0.00 0.00 5.34
179 180 2.463620 GCGCATCAAGATCCGTGCA 61.464 57.895 0.30 0.00 37.44 4.57
180 181 1.980951 GCGCATCAAGATCCGTGCAA 61.981 55.000 0.30 0.00 37.44 4.08
181 182 0.027194 CGCATCAAGATCCGTGCAAG 59.973 55.000 0.00 0.00 37.44 4.01
182 183 1.089920 GCATCAAGATCCGTGCAAGT 58.910 50.000 0.00 0.00 37.52 3.16
183 184 2.279741 GCATCAAGATCCGTGCAAGTA 58.720 47.619 0.00 0.00 37.52 2.24
184 185 2.030946 GCATCAAGATCCGTGCAAGTAC 59.969 50.000 0.00 0.00 37.52 2.73
185 186 3.261580 CATCAAGATCCGTGCAAGTACA 58.738 45.455 0.00 0.00 0.00 2.90
186 187 3.610040 TCAAGATCCGTGCAAGTACAT 57.390 42.857 0.00 0.00 0.00 2.29
187 188 3.937814 TCAAGATCCGTGCAAGTACATT 58.062 40.909 0.00 0.00 0.00 2.71
188 189 4.323417 TCAAGATCCGTGCAAGTACATTT 58.677 39.130 0.00 0.00 0.00 2.32
189 190 4.391830 TCAAGATCCGTGCAAGTACATTTC 59.608 41.667 0.00 0.00 0.00 2.17
190 191 4.207891 AGATCCGTGCAAGTACATTTCT 57.792 40.909 0.00 0.00 0.00 2.52
191 192 4.184629 AGATCCGTGCAAGTACATTTCTC 58.815 43.478 0.00 0.00 0.00 2.87
192 193 3.678056 TCCGTGCAAGTACATTTCTCT 57.322 42.857 0.00 0.00 0.00 3.10
193 194 4.002906 TCCGTGCAAGTACATTTCTCTT 57.997 40.909 0.00 0.00 0.00 2.85
194 195 4.385825 TCCGTGCAAGTACATTTCTCTTT 58.614 39.130 0.00 0.00 0.00 2.52
195 196 4.819630 TCCGTGCAAGTACATTTCTCTTTT 59.180 37.500 0.00 0.00 0.00 2.27
196 197 5.298276 TCCGTGCAAGTACATTTCTCTTTTT 59.702 36.000 0.00 0.00 0.00 1.94
223 224 9.809096 TGTTTCTCTCACATAGAATATGTCTTC 57.191 33.333 0.00 0.00 37.84 2.87
224 225 9.809096 GTTTCTCTCACATAGAATATGTCTTCA 57.191 33.333 0.00 0.00 37.84 3.02
227 228 9.194972 TCTCTCACATAGAATATGTCTTCAAGT 57.805 33.333 0.00 0.00 37.84 3.16
228 229 9.814899 CTCTCACATAGAATATGTCTTCAAGTT 57.185 33.333 0.00 0.00 37.84 2.66
229 230 9.809096 TCTCACATAGAATATGTCTTCAAGTTC 57.191 33.333 0.00 0.00 37.84 3.01
230 231 9.591792 CTCACATAGAATATGTCTTCAAGTTCA 57.408 33.333 0.00 0.00 37.84 3.18
231 232 9.942850 TCACATAGAATATGTCTTCAAGTTCAA 57.057 29.630 0.00 0.00 37.84 2.69
234 235 9.994432 CATAGAATATGTCTTCAAGTTCAAACC 57.006 33.333 0.00 0.00 37.84 3.27
235 236 9.965902 ATAGAATATGTCTTCAAGTTCAAACCT 57.034 29.630 0.00 0.00 37.84 3.50
236 237 8.697507 AGAATATGTCTTCAAGTTCAAACCTT 57.302 30.769 0.00 0.00 29.66 3.50
237 238 9.136323 AGAATATGTCTTCAAGTTCAAACCTTT 57.864 29.630 0.00 0.00 29.66 3.11
238 239 9.185192 GAATATGTCTTCAAGTTCAAACCTTTG 57.815 33.333 0.00 0.00 39.48 2.77
239 240 4.743493 TGTCTTCAAGTTCAAACCTTTGC 58.257 39.130 0.00 0.00 38.05 3.68
240 241 4.219507 TGTCTTCAAGTTCAAACCTTTGCA 59.780 37.500 0.00 0.00 38.05 4.08
241 242 4.800471 GTCTTCAAGTTCAAACCTTTGCAG 59.200 41.667 0.00 0.00 38.05 4.41
242 243 4.704540 TCTTCAAGTTCAAACCTTTGCAGA 59.295 37.500 0.00 0.00 38.05 4.26
243 244 5.184864 TCTTCAAGTTCAAACCTTTGCAGAA 59.815 36.000 0.00 0.00 38.05 3.02
244 245 4.743493 TCAAGTTCAAACCTTTGCAGAAC 58.257 39.130 4.96 4.96 38.05 3.01
245 246 4.219507 TCAAGTTCAAACCTTTGCAGAACA 59.780 37.500 13.27 0.00 38.05 3.18
246 247 4.376340 AGTTCAAACCTTTGCAGAACAG 57.624 40.909 13.27 0.00 38.05 3.16
247 248 3.763897 AGTTCAAACCTTTGCAGAACAGT 59.236 39.130 13.27 0.00 38.05 3.55
248 249 4.947388 AGTTCAAACCTTTGCAGAACAGTA 59.053 37.500 13.27 0.00 38.05 2.74
249 250 5.417580 AGTTCAAACCTTTGCAGAACAGTAA 59.582 36.000 13.27 0.00 38.05 2.24
250 251 5.906113 TCAAACCTTTGCAGAACAGTAAA 57.094 34.783 0.00 0.00 38.05 2.01
251 252 5.890334 TCAAACCTTTGCAGAACAGTAAAG 58.110 37.500 0.00 0.00 39.81 1.85
252 253 3.990318 ACCTTTGCAGAACAGTAAAGC 57.010 42.857 0.00 0.00 39.10 3.51
253 254 3.555966 ACCTTTGCAGAACAGTAAAGCT 58.444 40.909 0.00 0.00 39.10 3.74
254 255 3.954258 ACCTTTGCAGAACAGTAAAGCTT 59.046 39.130 0.00 0.00 39.10 3.74
255 256 4.402474 ACCTTTGCAGAACAGTAAAGCTTT 59.598 37.500 17.30 17.30 39.10 3.51
256 257 4.978580 CCTTTGCAGAACAGTAAAGCTTTC 59.021 41.667 16.57 7.71 39.10 2.62
257 258 5.221126 CCTTTGCAGAACAGTAAAGCTTTCT 60.221 40.000 16.57 9.95 39.10 2.52
258 259 6.017109 CCTTTGCAGAACAGTAAAGCTTTCTA 60.017 38.462 16.57 0.00 39.10 2.10
259 260 6.935741 TTGCAGAACAGTAAAGCTTTCTAA 57.064 33.333 16.57 0.00 0.00 2.10
260 261 6.300354 TGCAGAACAGTAAAGCTTTCTAAC 57.700 37.500 16.57 8.78 0.00 2.34
261 262 6.055588 TGCAGAACAGTAAAGCTTTCTAACT 58.944 36.000 16.57 11.15 0.00 2.24
262 263 7.214381 TGCAGAACAGTAAAGCTTTCTAACTA 58.786 34.615 16.57 0.00 0.00 2.24
263 264 7.385205 TGCAGAACAGTAAAGCTTTCTAACTAG 59.615 37.037 16.57 10.71 0.00 2.57
264 265 7.599245 GCAGAACAGTAAAGCTTTCTAACTAGA 59.401 37.037 16.57 0.00 0.00 2.43
265 266 9.477484 CAGAACAGTAAAGCTTTCTAACTAGAA 57.523 33.333 16.57 0.00 40.33 2.10
394 395 9.807921 TCTGAAAGTTTTATCCCAAATTCTAGT 57.192 29.630 0.00 0.00 33.76 2.57
406 407 8.712285 TCCCAAATTCTAGTTAGTATGTTTCG 57.288 34.615 0.00 0.00 0.00 3.46
407 408 7.279313 TCCCAAATTCTAGTTAGTATGTTTCGC 59.721 37.037 0.00 0.00 0.00 4.70
408 409 7.280205 CCCAAATTCTAGTTAGTATGTTTCGCT 59.720 37.037 0.00 0.00 0.00 4.93
409 410 9.309516 CCAAATTCTAGTTAGTATGTTTCGCTA 57.690 33.333 0.00 0.00 0.00 4.26
411 412 8.557869 AATTCTAGTTAGTATGTTTCGCTACG 57.442 34.615 0.00 0.00 0.00 3.51
412 413 5.505286 TCTAGTTAGTATGTTTCGCTACGC 58.495 41.667 0.00 0.00 0.00 4.42
413 414 4.367386 AGTTAGTATGTTTCGCTACGCT 57.633 40.909 0.00 0.00 0.00 5.07
414 415 4.103357 AGTTAGTATGTTTCGCTACGCTG 58.897 43.478 0.00 0.00 0.00 5.18
415 416 1.278238 AGTATGTTTCGCTACGCTGC 58.722 50.000 0.00 0.00 0.00 5.25
416 417 0.996462 GTATGTTTCGCTACGCTGCA 59.004 50.000 0.00 0.00 0.00 4.41
417 418 1.392168 GTATGTTTCGCTACGCTGCAA 59.608 47.619 0.00 0.00 0.00 4.08
418 419 0.871722 ATGTTTCGCTACGCTGCAAA 59.128 45.000 0.00 0.00 0.00 3.68
419 420 0.234625 TGTTTCGCTACGCTGCAAAG 59.765 50.000 0.00 0.00 0.00 2.77
420 421 0.234884 GTTTCGCTACGCTGCAAAGT 59.765 50.000 0.00 0.00 0.00 2.66
421 422 0.941542 TTTCGCTACGCTGCAAAGTT 59.058 45.000 0.00 0.00 0.00 2.66
422 423 0.941542 TTCGCTACGCTGCAAAGTTT 59.058 45.000 0.00 0.00 0.00 2.66
423 424 0.234625 TCGCTACGCTGCAAAGTTTG 59.765 50.000 11.41 11.41 0.00 2.93
424 425 0.234625 CGCTACGCTGCAAAGTTTGA 59.765 50.000 19.82 3.95 0.00 2.69
425 426 1.333702 CGCTACGCTGCAAAGTTTGAA 60.334 47.619 19.82 8.06 0.00 2.69
426 427 2.310577 GCTACGCTGCAAAGTTTGAAG 58.689 47.619 19.82 18.91 39.47 3.02
427 428 2.287009 GCTACGCTGCAAAGTTTGAAGT 60.287 45.455 22.18 15.09 38.65 3.01
428 429 2.939460 ACGCTGCAAAGTTTGAAGTT 57.061 40.000 22.18 9.24 38.65 2.66
429 430 2.797491 ACGCTGCAAAGTTTGAAGTTC 58.203 42.857 22.18 8.03 38.65 3.01
430 431 2.163412 ACGCTGCAAAGTTTGAAGTTCA 59.837 40.909 22.18 0.08 38.65 3.18
431 432 3.178267 CGCTGCAAAGTTTGAAGTTCAA 58.822 40.909 22.18 14.35 38.65 2.69
432 433 3.241322 CGCTGCAAAGTTTGAAGTTCAAG 59.759 43.478 22.18 7.75 38.65 3.02
433 434 4.423732 GCTGCAAAGTTTGAAGTTCAAGA 58.576 39.130 22.18 7.27 38.65 3.02
434 435 4.266265 GCTGCAAAGTTTGAAGTTCAAGAC 59.734 41.667 22.18 16.90 38.65 3.01
435 436 5.384063 TGCAAAGTTTGAAGTTCAAGACA 57.616 34.783 19.82 8.69 37.70 3.41
436 437 5.964758 TGCAAAGTTTGAAGTTCAAGACAT 58.035 33.333 19.82 9.69 37.70 3.06
437 438 5.806502 TGCAAAGTTTGAAGTTCAAGACATG 59.193 36.000 19.82 18.31 37.70 3.21
438 439 5.807011 GCAAAGTTTGAAGTTCAAGACATGT 59.193 36.000 19.82 0.00 37.70 3.21
439 440 6.311200 GCAAAGTTTGAAGTTCAAGACATGTT 59.689 34.615 19.82 11.21 37.70 2.71
440 441 7.463251 GCAAAGTTTGAAGTTCAAGACATGTTC 60.463 37.037 19.82 2.70 37.70 3.18
441 442 7.396540 AAGTTTGAAGTTCAAGACATGTTCT 57.603 32.000 17.36 0.00 37.70 3.01
442 443 8.506168 AAGTTTGAAGTTCAAGACATGTTCTA 57.494 30.769 17.36 0.00 37.70 2.10
443 444 8.682936 AGTTTGAAGTTCAAGACATGTTCTAT 57.317 30.769 17.36 0.68 37.70 1.98
444 445 9.778741 AGTTTGAAGTTCAAGACATGTTCTATA 57.221 29.630 17.36 0.00 37.70 1.31
447 448 9.942850 TTGAAGTTCAAGACATGTTCTATATGA 57.057 29.630 14.35 0.00 32.51 2.15
448 449 9.591792 TGAAGTTCAAGACATGTTCTATATGAG 57.408 33.333 2.20 0.00 32.51 2.90
449 450 9.809096 GAAGTTCAAGACATGTTCTATATGAGA 57.191 33.333 0.00 0.00 32.51 3.27
450 451 9.814899 AAGTTCAAGACATGTTCTATATGAGAG 57.185 33.333 0.00 0.00 34.93 3.20
451 452 9.194972 AGTTCAAGACATGTTCTATATGAGAGA 57.805 33.333 0.00 0.00 34.93 3.10
452 453 9.809096 GTTCAAGACATGTTCTATATGAGAGAA 57.191 33.333 0.00 0.00 34.93 2.87
454 455 9.809096 TCAAGACATGTTCTATATGAGAGAAAC 57.191 33.333 0.00 0.00 34.78 2.78
455 456 9.591792 CAAGACATGTTCTATATGAGAGAAACA 57.408 33.333 0.00 0.00 34.78 2.83
494 495 7.751047 TCATATACAAACTTAGTTGTCTCGC 57.249 36.000 0.00 0.00 40.85 5.03
495 496 7.317390 TCATATACAAACTTAGTTGTCTCGCA 58.683 34.615 0.00 0.00 40.85 5.10
496 497 5.840940 ATACAAACTTAGTTGTCTCGCAC 57.159 39.130 0.00 0.00 40.85 5.34
497 498 3.527533 ACAAACTTAGTTGTCTCGCACA 58.472 40.909 0.00 0.00 37.10 4.57
498 499 3.555956 ACAAACTTAGTTGTCTCGCACAG 59.444 43.478 0.00 0.00 37.10 3.66
499 500 3.728076 AACTTAGTTGTCTCGCACAGA 57.272 42.857 0.00 0.00 35.97 3.41
500 501 3.944055 ACTTAGTTGTCTCGCACAGAT 57.056 42.857 0.00 0.00 35.97 2.90
501 502 3.839293 ACTTAGTTGTCTCGCACAGATC 58.161 45.455 0.00 0.00 35.97 2.75
502 503 3.508012 ACTTAGTTGTCTCGCACAGATCT 59.492 43.478 0.00 0.00 35.97 2.75
503 504 4.021894 ACTTAGTTGTCTCGCACAGATCTT 60.022 41.667 0.00 0.00 35.97 2.40
504 505 5.183331 ACTTAGTTGTCTCGCACAGATCTTA 59.817 40.000 0.00 0.00 35.97 2.10
505 506 4.521130 AGTTGTCTCGCACAGATCTTAA 57.479 40.909 0.00 0.00 35.97 1.85
506 507 4.883083 AGTTGTCTCGCACAGATCTTAAA 58.117 39.130 0.00 0.00 35.97 1.52
507 508 4.926238 AGTTGTCTCGCACAGATCTTAAAG 59.074 41.667 0.00 0.00 35.97 1.85
508 509 3.254060 TGTCTCGCACAGATCTTAAAGC 58.746 45.455 0.00 0.00 32.08 3.51
509 510 3.254060 GTCTCGCACAGATCTTAAAGCA 58.746 45.455 0.00 0.00 32.08 3.91
510 511 3.679980 GTCTCGCACAGATCTTAAAGCAA 59.320 43.478 0.00 0.00 32.08 3.91
511 512 4.331168 GTCTCGCACAGATCTTAAAGCAAT 59.669 41.667 0.00 0.00 32.08 3.56
512 513 5.520288 GTCTCGCACAGATCTTAAAGCAATA 59.480 40.000 0.00 0.00 32.08 1.90
513 514 6.201806 GTCTCGCACAGATCTTAAAGCAATAT 59.798 38.462 0.00 0.00 32.08 1.28
514 515 6.763135 TCTCGCACAGATCTTAAAGCAATATT 59.237 34.615 0.00 0.00 0.00 1.28
515 516 6.718388 TCGCACAGATCTTAAAGCAATATTG 58.282 36.000 11.27 11.27 0.00 1.90
516 517 6.538381 TCGCACAGATCTTAAAGCAATATTGA 59.462 34.615 19.73 0.00 0.00 2.57
517 518 7.065683 TCGCACAGATCTTAAAGCAATATTGAA 59.934 33.333 19.73 3.55 0.00 2.69
518 519 7.375280 CGCACAGATCTTAAAGCAATATTGAAG 59.625 37.037 19.73 12.90 0.00 3.02
519 520 8.400947 GCACAGATCTTAAAGCAATATTGAAGA 58.599 33.333 19.73 17.32 0.00 2.87
520 521 9.932699 CACAGATCTTAAAGCAATATTGAAGAG 57.067 33.333 19.73 9.37 0.00 2.85
521 522 8.619546 ACAGATCTTAAAGCAATATTGAAGAGC 58.380 33.333 19.73 18.80 31.23 4.09
522 523 8.074972 CAGATCTTAAAGCAATATTGAAGAGCC 58.925 37.037 19.73 13.10 31.38 4.70
523 524 7.776969 AGATCTTAAAGCAATATTGAAGAGCCA 59.223 33.333 19.73 0.00 31.38 4.75
524 525 7.325660 TCTTAAAGCAATATTGAAGAGCCAG 57.674 36.000 19.73 5.59 0.00 4.85
525 526 7.112122 TCTTAAAGCAATATTGAAGAGCCAGA 58.888 34.615 19.73 7.65 0.00 3.86
526 527 7.611467 TCTTAAAGCAATATTGAAGAGCCAGAA 59.389 33.333 19.73 0.00 0.00 3.02
527 528 6.786967 AAAGCAATATTGAAGAGCCAGAAT 57.213 33.333 19.73 0.00 0.00 2.40
528 529 7.886629 AAAGCAATATTGAAGAGCCAGAATA 57.113 32.000 19.73 0.00 0.00 1.75
529 530 7.507733 AAGCAATATTGAAGAGCCAGAATAG 57.492 36.000 19.73 0.00 0.00 1.73
530 531 5.472820 AGCAATATTGAAGAGCCAGAATAGC 59.527 40.000 19.73 0.00 0.00 2.97
531 532 5.240183 GCAATATTGAAGAGCCAGAATAGCA 59.760 40.000 19.73 0.00 0.00 3.49
532 533 6.568081 GCAATATTGAAGAGCCAGAATAGCAG 60.568 42.308 19.73 0.00 0.00 4.24
533 534 2.996249 TGAAGAGCCAGAATAGCAGG 57.004 50.000 0.00 0.00 0.00 4.85
534 535 1.487976 TGAAGAGCCAGAATAGCAGGG 59.512 52.381 0.00 0.00 0.00 4.45
535 536 0.182299 AAGAGCCAGAATAGCAGGGC 59.818 55.000 0.00 0.00 46.77 5.19
537 538 2.922234 GCCAGAATAGCAGGGCCT 59.078 61.111 0.00 0.00 40.55 5.19
538 539 1.527844 GCCAGAATAGCAGGGCCTG 60.528 63.158 29.44 29.44 40.55 4.85
539 540 1.150081 CCAGAATAGCAGGGCCTGG 59.850 63.158 33.43 15.46 38.48 4.45
540 541 1.150081 CAGAATAGCAGGGCCTGGG 59.850 63.158 33.43 11.33 31.21 4.45
541 542 1.308216 AGAATAGCAGGGCCTGGGT 60.308 57.895 33.43 21.39 31.21 4.51
542 543 1.152881 GAATAGCAGGGCCTGGGTG 60.153 63.158 33.43 11.08 31.21 4.61
543 544 3.364907 AATAGCAGGGCCTGGGTGC 62.365 63.158 33.43 20.80 37.48 5.01
550 551 4.603535 GGCCTGGGTGCAGGTGTT 62.604 66.667 0.00 0.00 44.07 3.32
551 552 2.985847 GCCTGGGTGCAGGTGTTC 60.986 66.667 0.00 0.00 44.07 3.18
552 553 2.839098 CCTGGGTGCAGGTGTTCT 59.161 61.111 0.00 0.00 37.57 3.01
553 554 2.066340 CCTGGGTGCAGGTGTTCTA 58.934 57.895 0.00 0.00 37.57 2.10
554 555 0.400213 CCTGGGTGCAGGTGTTCTAA 59.600 55.000 0.00 0.00 37.57 2.10
555 556 1.202879 CCTGGGTGCAGGTGTTCTAAA 60.203 52.381 0.00 0.00 37.57 1.85
556 557 2.582052 CTGGGTGCAGGTGTTCTAAAA 58.418 47.619 0.00 0.00 0.00 1.52
557 558 2.955660 CTGGGTGCAGGTGTTCTAAAAA 59.044 45.455 0.00 0.00 0.00 1.94
558 559 3.571590 TGGGTGCAGGTGTTCTAAAAAT 58.428 40.909 0.00 0.00 0.00 1.82
559 560 4.730966 TGGGTGCAGGTGTTCTAAAAATA 58.269 39.130 0.00 0.00 0.00 1.40
560 561 5.329399 TGGGTGCAGGTGTTCTAAAAATAT 58.671 37.500 0.00 0.00 0.00 1.28
561 562 5.184864 TGGGTGCAGGTGTTCTAAAAATATG 59.815 40.000 0.00 0.00 0.00 1.78
562 563 5.102313 GGTGCAGGTGTTCTAAAAATATGC 58.898 41.667 0.00 0.00 0.00 3.14
563 564 5.336372 GGTGCAGGTGTTCTAAAAATATGCA 60.336 40.000 0.00 0.00 38.70 3.96
564 565 6.332630 GTGCAGGTGTTCTAAAAATATGCAT 58.667 36.000 3.79 3.79 42.42 3.96
565 566 6.473455 GTGCAGGTGTTCTAAAAATATGCATC 59.527 38.462 0.19 0.00 42.42 3.91
566 567 5.979517 GCAGGTGTTCTAAAAATATGCATCC 59.020 40.000 0.19 0.00 0.00 3.51
581 582 8.832458 AATATGCATCCATCCAAATCATATGA 57.168 30.769 8.10 8.10 32.85 2.15
583 584 5.014202 TGCATCCATCCAAATCATATGAGG 58.986 41.667 11.78 7.32 0.00 3.86
628 629 2.520465 ATCGACCGCTTCATGCACCA 62.520 55.000 0.00 0.00 43.06 4.17
632 633 1.973281 CCGCTTCATGCACCAGGTT 60.973 57.895 0.00 0.00 43.06 3.50
638 639 3.884895 CTTCATGCACCAGGTTACCATA 58.115 45.455 3.51 0.00 0.00 2.74
776 777 8.103305 TCCAAGCTGAGAGAAACTTATTACAAT 58.897 33.333 0.00 0.00 0.00 2.71
805 806 1.529244 GTGCTGGCACCTCCTGTTT 60.529 57.895 14.03 0.00 40.79 2.83
810 811 0.843309 TGGCACCTCCTGTTTCTCAA 59.157 50.000 0.00 0.00 35.26 3.02
813 814 2.553028 GGCACCTCCTGTTTCTCAATGA 60.553 50.000 0.00 0.00 0.00 2.57
816 817 2.289694 ACCTCCTGTTTCTCAATGACGG 60.290 50.000 0.00 0.00 0.00 4.79
819 820 0.443869 CTGTTTCTCAATGACGGCGG 59.556 55.000 13.24 0.00 0.00 6.13
872 885 1.588674 CGATAGACGACAGCCTCTCT 58.411 55.000 0.00 0.00 45.77 3.10
920 933 0.320771 GCCTGGACGAGCTTCTTGAA 60.321 55.000 0.00 0.00 0.00 2.69
932 948 2.816087 GCTTCTTGAACTGATCCAGCAA 59.184 45.455 0.00 0.00 34.37 3.91
1004 1020 0.323178 CTCTCCTTGCCAGGCATGTT 60.323 55.000 17.09 0.00 40.58 2.71
1049 1065 4.475135 GCTCGGGCTTGGGTCTCC 62.475 72.222 0.00 0.00 35.22 3.71
1064 1080 3.306595 CTCCGCAGCAGAGCAAGGA 62.307 63.158 0.00 0.00 0.00 3.36
1113 1129 2.361610 AGCAACTTGGCATCCCCG 60.362 61.111 0.00 0.00 35.87 5.73
1141 1199 0.322906 GGAGGAAACCTTGGGAGCAG 60.323 60.000 0.00 0.00 31.76 4.24
1152 1210 3.395941 CCTTGGGAGCAGGAGGTAATTAT 59.604 47.826 0.00 0.00 32.41 1.28
1175 1233 4.717279 TTAAGCTACCTGTTCCCAAACT 57.283 40.909 0.00 0.00 36.30 2.66
1268 1327 4.018490 TCATAGTTTGCACAATCCAGCAT 58.982 39.130 0.00 0.00 40.94 3.79
1353 1419 9.232473 GTTTTAATTTCCACTTGGTATCTCTCT 57.768 33.333 0.00 0.00 36.34 3.10
1415 1504 0.101219 TCGATGACATGCGGACAGAG 59.899 55.000 0.00 0.00 0.00 3.35
1551 1649 1.680735 ACGCAATGAAAACTCTTGCCA 59.319 42.857 0.00 0.00 41.67 4.92
1567 1665 2.229792 TGCCAATGAACACTCAAGACC 58.770 47.619 0.00 0.00 34.49 3.85
1590 1691 4.493220 CGCTATTCTTCAAGGAAGCTTTCG 60.493 45.833 0.00 0.00 39.29 3.46
1956 2069 1.125633 TGCTCTGGATGCTGCTATCA 58.874 50.000 0.00 0.00 0.00 2.15
2105 2227 5.680619 TCCAAGTGTGACAACTTCATTACT 58.319 37.500 0.00 0.00 38.34 2.24
2141 2263 0.104882 TAACTCCCTCACACCCACCA 60.105 55.000 0.00 0.00 0.00 4.17
2441 2575 1.734465 CTTTTGGAGACGCTGGATGTC 59.266 52.381 0.00 0.00 36.60 3.06
2513 2647 7.982919 CCATGCTTGATTCATCTATTTGGAAAA 59.017 33.333 0.22 0.00 0.00 2.29
2539 2673 2.303311 AGCTCCAAGAAGGTGTAGGAAC 59.697 50.000 0.00 0.00 39.02 3.62
2780 4117 2.041485 TGTCTCAAATGCCATCAAGGGA 59.959 45.455 0.00 0.00 44.34 4.20
2855 4192 9.826574 CATTTCAATGATAAATGGTTCCAAGAT 57.173 29.630 0.00 0.00 39.55 2.40
3008 4348 3.499926 GCCTTTCATCCCCTCATCATCAT 60.500 47.826 0.00 0.00 0.00 2.45
3072 4412 3.343941 TGGCGTACCTAAAGCTGATTT 57.656 42.857 0.00 0.00 36.63 2.17
3134 4474 0.461961 GAAGCCTGCGAGGACTATGT 59.538 55.000 6.40 0.00 37.67 2.29
3152 4492 6.640518 ACTATGTATCGTGGTTGAAGTCATT 58.359 36.000 0.00 0.00 0.00 2.57
3187 4527 0.179051 CAAGAGGGAGCTCTGCCATC 60.179 60.000 14.64 4.98 44.28 3.51
3326 4666 3.026694 ACAAAAGTGGAAAGAAGCAGCT 58.973 40.909 0.00 0.00 0.00 4.24
3333 4673 4.644685 AGTGGAAAGAAGCAGCTAAAAACA 59.355 37.500 0.00 0.00 0.00 2.83
3335 4675 5.810074 GTGGAAAGAAGCAGCTAAAAACAAA 59.190 36.000 0.00 0.00 0.00 2.83
3336 4676 6.312672 GTGGAAAGAAGCAGCTAAAAACAAAA 59.687 34.615 0.00 0.00 0.00 2.44
3481 4821 4.457496 GCGCACCTGAGGCAGCTA 62.457 66.667 13.57 0.00 0.00 3.32
3660 5001 3.926616 TCTTCAGGATTTTCTCGTCCAC 58.073 45.455 0.00 0.00 36.96 4.02
3687 5029 0.817654 TGTACCGTCTCCTGCATCAG 59.182 55.000 0.00 0.00 0.00 2.90
3966 5313 4.027458 CACACTGTTTTGAGCGAAACATTG 60.027 41.667 22.05 22.05 46.71 2.82
3988 5335 2.605837 TTGCGAGTGTTGTAAGGACA 57.394 45.000 0.00 0.00 0.00 4.02
4028 5375 0.379316 ACCCAAAAACACGAAGCGAC 59.621 50.000 0.00 0.00 0.00 5.19
4206 5553 4.220693 TCAACTATGTGCCTATGCTTGT 57.779 40.909 0.00 0.00 38.71 3.16
4380 5730 7.323656 CGAGTGCTTGGAAGTTTTTAAATACTG 59.676 37.037 11.41 1.51 0.00 2.74
4400 5750 4.887655 ACTGGAAACACTTCGGATCTTTTT 59.112 37.500 0.00 0.00 35.60 1.94
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 4.720902 TCCATGGCGCCACCTGTG 62.721 66.667 35.50 25.89 40.22 3.66
2 3 3.925630 CTTCCATGGCGCCACCTGT 62.926 63.158 35.50 14.18 40.22 4.00
5 6 2.252072 TAGACTTCCATGGCGCCACC 62.252 60.000 35.50 14.46 39.84 4.61
6 7 1.090052 GTAGACTTCCATGGCGCCAC 61.090 60.000 35.50 17.81 0.00 5.01
7 8 1.220749 GTAGACTTCCATGGCGCCA 59.779 57.895 34.80 34.80 0.00 5.69
8 9 0.392461 TTGTAGACTTCCATGGCGCC 60.392 55.000 22.73 22.73 0.00 6.53
9 10 1.009829 CTTGTAGACTTCCATGGCGC 58.990 55.000 6.96 0.00 0.00 6.53
10 11 1.656652 CCTTGTAGACTTCCATGGCG 58.343 55.000 6.96 2.80 0.00 5.69
11 12 1.340017 TGCCTTGTAGACTTCCATGGC 60.340 52.381 6.96 17.81 46.56 4.40
12 13 2.787473 TGCCTTGTAGACTTCCATGG 57.213 50.000 4.97 4.97 0.00 3.66
13 14 3.804325 CGTATGCCTTGTAGACTTCCATG 59.196 47.826 0.00 0.00 0.00 3.66
14 15 3.181465 CCGTATGCCTTGTAGACTTCCAT 60.181 47.826 0.00 0.00 0.00 3.41
15 16 2.167693 CCGTATGCCTTGTAGACTTCCA 59.832 50.000 0.00 0.00 0.00 3.53
16 17 2.822764 CCGTATGCCTTGTAGACTTCC 58.177 52.381 0.00 0.00 0.00 3.46
17 18 2.202566 GCCGTATGCCTTGTAGACTTC 58.797 52.381 0.00 0.00 0.00 3.01
18 19 1.553248 TGCCGTATGCCTTGTAGACTT 59.447 47.619 0.00 0.00 40.16 3.01
19 20 1.134788 GTGCCGTATGCCTTGTAGACT 60.135 52.381 0.00 0.00 40.16 3.24
20 21 1.287425 GTGCCGTATGCCTTGTAGAC 58.713 55.000 0.00 0.00 40.16 2.59
21 22 0.899019 TGTGCCGTATGCCTTGTAGA 59.101 50.000 0.00 0.00 40.16 2.59
22 23 1.006832 GTGTGCCGTATGCCTTGTAG 58.993 55.000 0.00 0.00 40.16 2.74
23 24 0.391927 GGTGTGCCGTATGCCTTGTA 60.392 55.000 0.00 0.00 40.16 2.41
24 25 1.674322 GGTGTGCCGTATGCCTTGT 60.674 57.895 0.00 0.00 40.16 3.16
25 26 3.187058 GGTGTGCCGTATGCCTTG 58.813 61.111 0.00 0.00 40.16 3.61
44 45 3.382803 CTCCTCCCTGAAGGCTGCG 62.383 68.421 0.00 0.00 36.29 5.18
45 46 2.588989 CTCCTCCCTGAAGGCTGC 59.411 66.667 0.00 0.00 36.29 5.25
46 47 2.588989 GCTCCTCCCTGAAGGCTG 59.411 66.667 0.00 0.00 36.29 4.85
47 48 3.080121 CGCTCCTCCCTGAAGGCT 61.080 66.667 0.00 0.00 36.29 4.58
48 49 4.847444 GCGCTCCTCCCTGAAGGC 62.847 72.222 0.00 0.00 36.29 4.35
49 50 4.168291 GGCGCTCCTCCCTGAAGG 62.168 72.222 7.64 0.00 37.81 3.46
50 51 4.521062 CGGCGCTCCTCCCTGAAG 62.521 72.222 7.64 0.00 0.00 3.02
55 56 4.821589 CAACTCGGCGCTCCTCCC 62.822 72.222 7.64 0.00 0.00 4.30
56 57 3.991536 GACAACTCGGCGCTCCTCC 62.992 68.421 7.64 0.00 0.00 4.30
57 58 2.507324 GACAACTCGGCGCTCCTC 60.507 66.667 7.64 0.00 0.00 3.71
58 59 2.992114 AGACAACTCGGCGCTCCT 60.992 61.111 7.64 0.00 0.00 3.69
59 60 2.507324 GAGACAACTCGGCGCTCC 60.507 66.667 7.64 0.00 33.32 4.70
60 61 2.507324 GGAGACAACTCGGCGCTC 60.507 66.667 7.64 1.13 43.44 5.03
61 62 3.288308 CTGGAGACAACTCGGCGCT 62.288 63.158 7.64 0.00 43.44 5.92
62 63 2.811317 CTGGAGACAACTCGGCGC 60.811 66.667 0.00 0.00 43.44 6.53
63 64 1.734477 CACTGGAGACAACTCGGCG 60.734 63.158 0.00 0.00 43.44 6.46
64 65 2.029844 GCACTGGAGACAACTCGGC 61.030 63.158 0.00 0.00 43.44 5.54
65 66 0.668706 CAGCACTGGAGACAACTCGG 60.669 60.000 0.00 0.00 43.44 4.63
66 67 2.819667 CAGCACTGGAGACAACTCG 58.180 57.895 0.00 0.00 43.44 4.18
81 82 3.270839 GCGCTCTCTGCATCCAGC 61.271 66.667 0.00 0.00 43.06 4.85
82 83 2.960659 CGCGCTCTCTGCATCCAG 60.961 66.667 5.56 0.00 43.06 3.86
83 84 3.706563 GACGCGCTCTCTGCATCCA 62.707 63.158 5.73 0.00 43.06 3.41
84 85 2.959071 GACGCGCTCTCTGCATCC 60.959 66.667 5.73 0.00 43.06 3.51
85 86 3.318555 CGACGCGCTCTCTGCATC 61.319 66.667 5.73 0.00 43.06 3.91
86 87 3.815396 TCGACGCGCTCTCTGCAT 61.815 61.111 5.73 0.00 43.06 3.96
87 88 4.760840 GTCGACGCGCTCTCTGCA 62.761 66.667 5.73 0.00 43.06 4.41
89 90 3.646735 TTCGTCGACGCGCTCTCTG 62.647 63.158 32.19 3.93 39.60 3.35
90 91 2.453773 TTTTCGTCGACGCGCTCTCT 62.454 55.000 32.19 0.00 39.60 3.10
91 92 1.403972 ATTTTCGTCGACGCGCTCTC 61.404 55.000 32.19 0.00 39.60 3.20
92 93 0.179181 TATTTTCGTCGACGCGCTCT 60.179 50.000 32.19 17.09 39.60 4.09
93 94 0.844503 ATATTTTCGTCGACGCGCTC 59.155 50.000 32.19 1.80 39.60 5.03
94 95 2.109609 TATATTTTCGTCGACGCGCT 57.890 45.000 32.19 18.09 39.60 5.92
95 96 3.413687 AATATATTTTCGTCGACGCGC 57.586 42.857 32.19 0.00 39.60 6.86
96 97 4.601522 CCAAAATATATTTTCGTCGACGCG 59.398 41.667 32.19 11.38 37.86 6.01
97 98 5.730269 TCCAAAATATATTTTCGTCGACGC 58.270 37.500 32.19 0.00 37.86 5.19
98 99 5.839239 GCTCCAAAATATATTTTCGTCGACG 59.161 40.000 31.30 31.30 37.86 5.12
99 100 6.627671 GTGCTCCAAAATATATTTTCGTCGAC 59.372 38.462 18.50 5.18 37.86 4.20
100 101 6.238266 GGTGCTCCAAAATATATTTTCGTCGA 60.238 38.462 18.50 11.44 37.86 4.20
101 102 5.907391 GGTGCTCCAAAATATATTTTCGTCG 59.093 40.000 18.50 9.09 37.86 5.12
102 103 7.027778 AGGTGCTCCAAAATATATTTTCGTC 57.972 36.000 18.50 10.47 37.86 4.20
103 104 7.554835 TGTAGGTGCTCCAAAATATATTTTCGT 59.445 33.333 18.50 11.25 37.86 3.85
104 105 7.855904 GTGTAGGTGCTCCAAAATATATTTTCG 59.144 37.037 18.50 13.47 37.86 3.46
105 106 8.135529 GGTGTAGGTGCTCCAAAATATATTTTC 58.864 37.037 18.50 9.63 37.86 2.29
106 107 7.069455 GGGTGTAGGTGCTCCAAAATATATTTT 59.931 37.037 16.15 16.15 40.37 1.82
107 108 6.549736 GGGTGTAGGTGCTCCAAAATATATTT 59.450 38.462 7.70 4.81 35.89 1.40
108 109 6.068670 GGGTGTAGGTGCTCCAAAATATATT 58.931 40.000 7.70 0.00 35.89 1.28
109 110 5.133660 TGGGTGTAGGTGCTCCAAAATATAT 59.866 40.000 7.70 0.00 35.89 0.86
110 111 4.475381 TGGGTGTAGGTGCTCCAAAATATA 59.525 41.667 7.70 0.00 35.89 0.86
111 112 3.268334 TGGGTGTAGGTGCTCCAAAATAT 59.732 43.478 7.70 0.00 35.89 1.28
112 113 2.645297 TGGGTGTAGGTGCTCCAAAATA 59.355 45.455 7.70 0.00 35.89 1.40
113 114 1.427368 TGGGTGTAGGTGCTCCAAAAT 59.573 47.619 7.70 0.00 35.89 1.82
114 115 0.847373 TGGGTGTAGGTGCTCCAAAA 59.153 50.000 7.70 0.00 35.89 2.44
115 116 0.400213 CTGGGTGTAGGTGCTCCAAA 59.600 55.000 7.70 0.00 35.89 3.28
116 117 1.488705 CCTGGGTGTAGGTGCTCCAA 61.489 60.000 7.70 0.00 35.89 3.53
117 118 1.918293 CCTGGGTGTAGGTGCTCCA 60.918 63.158 7.70 0.00 35.89 3.86
118 119 2.990479 CCTGGGTGTAGGTGCTCC 59.010 66.667 0.00 0.00 32.99 4.70
119 120 2.269241 GCCTGGGTGTAGGTGCTC 59.731 66.667 0.00 0.00 40.11 4.26
120 121 3.330720 GGCCTGGGTGTAGGTGCT 61.331 66.667 0.00 0.00 40.11 4.40
121 122 4.426313 GGGCCTGGGTGTAGGTGC 62.426 72.222 0.84 0.00 40.11 5.01
122 123 3.728373 GGGGCCTGGGTGTAGGTG 61.728 72.222 0.84 0.00 40.11 4.00
123 124 3.945064 GAGGGGCCTGGGTGTAGGT 62.945 68.421 0.84 0.00 40.11 3.08
124 125 3.090532 GAGGGGCCTGGGTGTAGG 61.091 72.222 0.84 0.00 40.95 3.18
125 126 0.326238 TAAGAGGGGCCTGGGTGTAG 60.326 60.000 0.84 0.00 0.00 2.74
126 127 0.345502 ATAAGAGGGGCCTGGGTGTA 59.654 55.000 0.84 0.00 0.00 2.90
127 128 0.988678 GATAAGAGGGGCCTGGGTGT 60.989 60.000 0.84 0.00 0.00 4.16
128 129 0.695803 AGATAAGAGGGGCCTGGGTG 60.696 60.000 0.84 0.00 0.00 4.61
129 130 0.949582 TAGATAAGAGGGGCCTGGGT 59.050 55.000 0.84 0.00 0.00 4.51
130 131 1.650528 CTAGATAAGAGGGGCCTGGG 58.349 60.000 0.84 0.00 0.00 4.45
131 132 0.980423 GCTAGATAAGAGGGGCCTGG 59.020 60.000 0.84 0.00 0.00 4.45
132 133 0.980423 GGCTAGATAAGAGGGGCCTG 59.020 60.000 0.84 0.00 36.96 4.85
133 134 0.568192 TGGCTAGATAAGAGGGGCCT 59.432 55.000 0.84 0.00 40.15 5.19
134 135 1.557371 GATGGCTAGATAAGAGGGGCC 59.443 57.143 0.00 0.00 39.93 5.80
135 136 1.557371 GGATGGCTAGATAAGAGGGGC 59.443 57.143 0.00 0.00 0.00 5.80
136 137 2.907892 TGGATGGCTAGATAAGAGGGG 58.092 52.381 0.00 0.00 0.00 4.79
137 138 4.782156 AGAATGGATGGCTAGATAAGAGGG 59.218 45.833 0.00 0.00 0.00 4.30
138 139 5.732633 CAGAATGGATGGCTAGATAAGAGG 58.267 45.833 0.00 0.00 0.00 3.69
139 140 5.177326 GCAGAATGGATGGCTAGATAAGAG 58.823 45.833 0.00 0.00 35.86 2.85
140 141 4.322273 CGCAGAATGGATGGCTAGATAAGA 60.322 45.833 0.00 0.00 35.86 2.10
141 142 3.931468 CGCAGAATGGATGGCTAGATAAG 59.069 47.826 0.00 0.00 35.86 1.73
142 143 3.866066 GCGCAGAATGGATGGCTAGATAA 60.866 47.826 0.30 0.00 35.86 1.75
143 144 2.354103 GCGCAGAATGGATGGCTAGATA 60.354 50.000 0.30 0.00 35.86 1.98
144 145 1.610102 GCGCAGAATGGATGGCTAGAT 60.610 52.381 0.30 0.00 35.86 1.98
145 146 0.250038 GCGCAGAATGGATGGCTAGA 60.250 55.000 0.30 0.00 35.86 2.43
146 147 0.533531 TGCGCAGAATGGATGGCTAG 60.534 55.000 5.66 0.00 35.86 3.42
147 148 0.109153 ATGCGCAGAATGGATGGCTA 59.891 50.000 18.32 0.00 35.86 3.93
148 149 1.152819 ATGCGCAGAATGGATGGCT 60.153 52.632 18.32 0.00 35.86 4.75
149 150 1.285023 GATGCGCAGAATGGATGGC 59.715 57.895 18.32 0.00 35.86 4.40
150 151 1.001706 CTTGATGCGCAGAATGGATGG 60.002 52.381 18.32 0.00 35.86 3.51
151 152 1.944709 TCTTGATGCGCAGAATGGATG 59.055 47.619 18.32 0.44 35.86 3.51
152 153 2.336945 TCTTGATGCGCAGAATGGAT 57.663 45.000 18.32 0.00 35.86 3.41
153 154 2.216046 GATCTTGATGCGCAGAATGGA 58.784 47.619 18.32 10.61 35.86 3.41
154 155 1.266175 GGATCTTGATGCGCAGAATGG 59.734 52.381 18.32 5.02 35.86 3.16
155 156 1.070108 CGGATCTTGATGCGCAGAATG 60.070 52.381 18.32 8.89 40.87 2.67
156 157 1.224075 CGGATCTTGATGCGCAGAAT 58.776 50.000 18.32 0.00 0.00 2.40
157 158 0.108186 ACGGATCTTGATGCGCAGAA 60.108 50.000 18.32 10.45 39.01 3.02
158 159 0.807275 CACGGATCTTGATGCGCAGA 60.807 55.000 18.32 8.06 39.01 4.26
159 160 1.640069 CACGGATCTTGATGCGCAG 59.360 57.895 18.32 12.19 39.01 5.18
160 161 2.463620 GCACGGATCTTGATGCGCA 61.464 57.895 14.96 14.96 39.01 6.09
161 162 1.980951 TTGCACGGATCTTGATGCGC 61.981 55.000 21.04 0.00 41.07 6.09
162 163 0.027194 CTTGCACGGATCTTGATGCG 59.973 55.000 19.86 19.86 41.07 4.73
163 164 1.089920 ACTTGCACGGATCTTGATGC 58.910 50.000 0.00 0.00 38.59 3.91
164 165 3.261580 TGTACTTGCACGGATCTTGATG 58.738 45.455 0.00 0.00 0.00 3.07
165 166 3.610040 TGTACTTGCACGGATCTTGAT 57.390 42.857 0.00 0.00 0.00 2.57
166 167 3.610040 ATGTACTTGCACGGATCTTGA 57.390 42.857 0.00 0.00 0.00 3.02
167 168 4.393062 AGAAATGTACTTGCACGGATCTTG 59.607 41.667 0.00 0.00 0.00 3.02
168 169 4.579869 AGAAATGTACTTGCACGGATCTT 58.420 39.130 0.00 0.00 0.00 2.40
169 170 4.081420 AGAGAAATGTACTTGCACGGATCT 60.081 41.667 0.00 0.00 0.00 2.75
170 171 4.184629 AGAGAAATGTACTTGCACGGATC 58.815 43.478 0.00 0.00 0.00 3.36
171 172 4.207891 AGAGAAATGTACTTGCACGGAT 57.792 40.909 0.00 0.00 0.00 4.18
172 173 3.678056 AGAGAAATGTACTTGCACGGA 57.322 42.857 0.00 0.00 0.00 4.69
173 174 4.749245 AAAGAGAAATGTACTTGCACGG 57.251 40.909 0.00 0.00 0.00 4.94
197 198 9.809096 GAAGACATATTCTATGTGAGAGAAACA 57.191 33.333 4.59 0.00 36.54 2.83
198 199 9.809096 TGAAGACATATTCTATGTGAGAGAAAC 57.191 33.333 4.59 0.00 36.54 2.78
201 202 9.194972 ACTTGAAGACATATTCTATGTGAGAGA 57.805 33.333 0.00 0.00 34.93 3.10
202 203 9.814899 AACTTGAAGACATATTCTATGTGAGAG 57.185 33.333 0.00 0.06 34.93 3.20
203 204 9.809096 GAACTTGAAGACATATTCTATGTGAGA 57.191 33.333 0.00 0.00 32.51 3.27
204 205 9.591792 TGAACTTGAAGACATATTCTATGTGAG 57.408 33.333 0.00 0.00 32.51 3.51
205 206 9.942850 TTGAACTTGAAGACATATTCTATGTGA 57.057 29.630 0.00 0.00 32.51 3.58
208 209 9.994432 GGTTTGAACTTGAAGACATATTCTATG 57.006 33.333 0.00 0.00 32.51 2.23
209 210 9.965902 AGGTTTGAACTTGAAGACATATTCTAT 57.034 29.630 0.00 0.00 32.51 1.98
210 211 9.793259 AAGGTTTGAACTTGAAGACATATTCTA 57.207 29.630 0.00 0.00 32.51 2.10
211 212 8.697507 AAGGTTTGAACTTGAAGACATATTCT 57.302 30.769 0.00 0.00 35.32 2.40
212 213 9.185192 CAAAGGTTTGAACTTGAAGACATATTC 57.815 33.333 0.00 0.00 40.55 1.75
213 214 7.653311 GCAAAGGTTTGAACTTGAAGACATATT 59.347 33.333 6.63 0.00 40.55 1.28
214 215 7.147976 GCAAAGGTTTGAACTTGAAGACATAT 58.852 34.615 6.63 0.00 40.55 1.78
215 216 6.096141 TGCAAAGGTTTGAACTTGAAGACATA 59.904 34.615 6.63 0.00 40.55 2.29
216 217 5.105392 TGCAAAGGTTTGAACTTGAAGACAT 60.105 36.000 6.63 0.00 40.55 3.06
217 218 4.219507 TGCAAAGGTTTGAACTTGAAGACA 59.780 37.500 6.63 0.00 40.55 3.41
218 219 4.743493 TGCAAAGGTTTGAACTTGAAGAC 58.257 39.130 6.63 0.00 40.55 3.01
219 220 4.704540 TCTGCAAAGGTTTGAACTTGAAGA 59.295 37.500 6.63 3.61 40.55 2.87
220 221 4.997565 TCTGCAAAGGTTTGAACTTGAAG 58.002 39.130 6.63 0.00 40.55 3.02
221 222 5.167845 GTTCTGCAAAGGTTTGAACTTGAA 58.832 37.500 6.63 0.00 40.55 2.69
222 223 4.219507 TGTTCTGCAAAGGTTTGAACTTGA 59.780 37.500 6.63 0.00 40.55 3.02
223 224 4.493547 TGTTCTGCAAAGGTTTGAACTTG 58.506 39.130 6.63 0.00 40.55 3.16
224 225 4.220602 ACTGTTCTGCAAAGGTTTGAACTT 59.779 37.500 6.63 0.12 40.55 2.66
225 226 3.763897 ACTGTTCTGCAAAGGTTTGAACT 59.236 39.130 6.63 0.00 40.55 3.01
226 227 4.110036 ACTGTTCTGCAAAGGTTTGAAC 57.890 40.909 6.63 5.94 40.55 3.18
227 228 5.906113 TTACTGTTCTGCAAAGGTTTGAA 57.094 34.783 6.63 0.00 40.55 2.69
228 229 5.678616 GCTTTACTGTTCTGCAAAGGTTTGA 60.679 40.000 6.63 0.00 40.55 2.69
229 230 4.504097 GCTTTACTGTTCTGCAAAGGTTTG 59.496 41.667 0.00 0.00 41.03 2.93
230 231 4.402474 AGCTTTACTGTTCTGCAAAGGTTT 59.598 37.500 0.00 0.00 35.76 3.27
231 232 3.954258 AGCTTTACTGTTCTGCAAAGGTT 59.046 39.130 0.00 0.00 35.76 3.50
232 233 3.555966 AGCTTTACTGTTCTGCAAAGGT 58.444 40.909 0.00 0.28 34.75 3.50
233 234 4.574599 AAGCTTTACTGTTCTGCAAAGG 57.425 40.909 0.00 0.00 0.00 3.11
234 235 5.825507 AGAAAGCTTTACTGTTCTGCAAAG 58.174 37.500 12.68 0.00 29.88 2.77
235 236 5.835113 AGAAAGCTTTACTGTTCTGCAAA 57.165 34.783 12.68 0.00 29.88 3.68
236 237 6.542370 AGTTAGAAAGCTTTACTGTTCTGCAA 59.458 34.615 12.68 0.00 32.01 4.08
237 238 6.055588 AGTTAGAAAGCTTTACTGTTCTGCA 58.944 36.000 12.68 0.00 32.01 4.41
238 239 6.546972 AGTTAGAAAGCTTTACTGTTCTGC 57.453 37.500 12.68 2.35 32.01 4.26
239 240 9.477484 TTCTAGTTAGAAAGCTTTACTGTTCTG 57.523 33.333 19.03 5.80 39.22 3.02
368 369 9.807921 ACTAGAATTTGGGATAAAACTTTCAGA 57.192 29.630 0.00 0.00 0.00 3.27
380 381 9.326413 CGAAACATACTAACTAGAATTTGGGAT 57.674 33.333 0.00 0.00 0.00 3.85
381 382 7.279313 GCGAAACATACTAACTAGAATTTGGGA 59.721 37.037 0.00 0.00 0.00 4.37
382 383 7.280205 AGCGAAACATACTAACTAGAATTTGGG 59.720 37.037 0.00 0.00 0.00 4.12
383 384 8.197988 AGCGAAACATACTAACTAGAATTTGG 57.802 34.615 0.00 0.00 0.00 3.28
385 386 9.017669 CGTAGCGAAACATACTAACTAGAATTT 57.982 33.333 0.00 0.00 0.00 1.82
386 387 8.557869 CGTAGCGAAACATACTAACTAGAATT 57.442 34.615 0.00 0.00 0.00 2.17
407 408 3.609103 ACTTCAAACTTTGCAGCGTAG 57.391 42.857 1.52 0.00 0.00 3.51
408 409 3.375610 TGAACTTCAAACTTTGCAGCGTA 59.624 39.130 1.52 0.00 0.00 4.42
409 410 2.163412 TGAACTTCAAACTTTGCAGCGT 59.837 40.909 1.52 0.00 0.00 5.07
410 411 2.796304 TGAACTTCAAACTTTGCAGCG 58.204 42.857 1.52 0.00 0.00 5.18
411 412 4.266265 GTCTTGAACTTCAAACTTTGCAGC 59.734 41.667 5.72 0.00 35.73 5.25
412 413 5.401550 TGTCTTGAACTTCAAACTTTGCAG 58.598 37.500 5.72 0.17 35.73 4.41
413 414 5.384063 TGTCTTGAACTTCAAACTTTGCA 57.616 34.783 5.72 0.00 35.73 4.08
414 415 5.807011 ACATGTCTTGAACTTCAAACTTTGC 59.193 36.000 5.72 0.00 35.73 3.68
415 416 7.756722 AGAACATGTCTTGAACTTCAAACTTTG 59.243 33.333 0.00 10.13 35.73 2.77
416 417 7.830739 AGAACATGTCTTGAACTTCAAACTTT 58.169 30.769 0.00 3.61 35.73 2.66
417 418 7.396540 AGAACATGTCTTGAACTTCAAACTT 57.603 32.000 0.00 3.62 35.73 2.66
418 419 8.682936 ATAGAACATGTCTTGAACTTCAAACT 57.317 30.769 0.00 0.00 35.73 2.66
421 422 9.942850 TCATATAGAACATGTCTTGAACTTCAA 57.057 29.630 0.00 4.16 37.84 2.69
422 423 9.591792 CTCATATAGAACATGTCTTGAACTTCA 57.408 33.333 0.00 0.00 37.84 3.02
423 424 9.809096 TCTCATATAGAACATGTCTTGAACTTC 57.191 33.333 0.00 0.00 37.84 3.01
424 425 9.814899 CTCTCATATAGAACATGTCTTGAACTT 57.185 33.333 0.00 0.00 37.84 2.66
425 426 9.194972 TCTCTCATATAGAACATGTCTTGAACT 57.805 33.333 0.00 0.00 37.84 3.01
426 427 9.809096 TTCTCTCATATAGAACATGTCTTGAAC 57.191 33.333 0.00 0.00 37.84 3.18
428 429 9.809096 GTTTCTCTCATATAGAACATGTCTTGA 57.191 33.333 0.00 0.00 37.84 3.02
429 430 9.591792 TGTTTCTCTCATATAGAACATGTCTTG 57.408 33.333 0.00 0.00 37.84 3.02
468 469 8.653338 GCGAGACAACTAAGTTTGTATATGAAA 58.347 33.333 0.00 0.00 39.88 2.69
469 470 7.815549 TGCGAGACAACTAAGTTTGTATATGAA 59.184 33.333 0.00 0.00 39.88 2.57
470 471 7.274904 GTGCGAGACAACTAAGTTTGTATATGA 59.725 37.037 0.00 0.00 39.88 2.15
471 472 7.062956 TGTGCGAGACAACTAAGTTTGTATATG 59.937 37.037 0.00 0.00 39.88 1.78
472 473 7.094631 TGTGCGAGACAACTAAGTTTGTATAT 58.905 34.615 0.00 0.00 39.88 0.86
473 474 6.448852 TGTGCGAGACAACTAAGTTTGTATA 58.551 36.000 0.00 0.00 39.88 1.47
474 475 5.294356 TGTGCGAGACAACTAAGTTTGTAT 58.706 37.500 0.00 0.00 39.88 2.29
475 476 4.684877 TGTGCGAGACAACTAAGTTTGTA 58.315 39.130 0.00 0.00 39.88 2.41
476 477 3.527533 TGTGCGAGACAACTAAGTTTGT 58.472 40.909 0.00 0.00 42.55 2.83
477 478 3.802139 TCTGTGCGAGACAACTAAGTTTG 59.198 43.478 0.00 0.00 32.80 2.93
478 479 4.054780 TCTGTGCGAGACAACTAAGTTT 57.945 40.909 0.00 0.00 32.80 2.66
479 480 3.728076 TCTGTGCGAGACAACTAAGTT 57.272 42.857 0.00 0.00 32.80 2.66
480 481 3.508012 AGATCTGTGCGAGACAACTAAGT 59.492 43.478 0.00 0.00 32.80 2.24
481 482 4.103365 AGATCTGTGCGAGACAACTAAG 57.897 45.455 0.00 0.00 32.80 2.18
482 483 4.521130 AAGATCTGTGCGAGACAACTAA 57.479 40.909 0.00 0.00 32.80 2.24
483 484 5.638596 TTAAGATCTGTGCGAGACAACTA 57.361 39.130 0.00 0.00 32.80 2.24
484 485 4.521130 TTAAGATCTGTGCGAGACAACT 57.479 40.909 0.00 0.00 32.80 3.16
485 486 4.434857 GCTTTAAGATCTGTGCGAGACAAC 60.435 45.833 0.00 0.00 32.80 3.32
486 487 3.679980 GCTTTAAGATCTGTGCGAGACAA 59.320 43.478 0.00 0.00 32.80 3.18
487 488 3.254060 GCTTTAAGATCTGTGCGAGACA 58.746 45.455 0.00 0.00 31.75 3.41
488 489 3.254060 TGCTTTAAGATCTGTGCGAGAC 58.746 45.455 0.00 0.00 31.75 3.36
489 490 3.592898 TGCTTTAAGATCTGTGCGAGA 57.407 42.857 0.00 0.00 34.25 4.04
490 491 4.871993 ATTGCTTTAAGATCTGTGCGAG 57.128 40.909 0.00 0.00 0.00 5.03
491 492 6.538381 TCAATATTGCTTTAAGATCTGTGCGA 59.462 34.615 10.76 0.00 0.00 5.10
492 493 6.718388 TCAATATTGCTTTAAGATCTGTGCG 58.282 36.000 10.76 0.00 0.00 5.34
493 494 8.400947 TCTTCAATATTGCTTTAAGATCTGTGC 58.599 33.333 10.76 0.00 0.00 4.57
494 495 9.932699 CTCTTCAATATTGCTTTAAGATCTGTG 57.067 33.333 10.76 0.00 0.00 3.66
495 496 8.619546 GCTCTTCAATATTGCTTTAAGATCTGT 58.380 33.333 10.76 0.00 0.00 3.41
496 497 8.074972 GGCTCTTCAATATTGCTTTAAGATCTG 58.925 37.037 10.76 4.78 0.00 2.90
497 498 7.776969 TGGCTCTTCAATATTGCTTTAAGATCT 59.223 33.333 10.76 0.00 0.00 2.75
498 499 7.934457 TGGCTCTTCAATATTGCTTTAAGATC 58.066 34.615 10.76 9.51 0.00 2.75
499 500 7.776969 TCTGGCTCTTCAATATTGCTTTAAGAT 59.223 33.333 10.76 0.00 0.00 2.40
500 501 7.112122 TCTGGCTCTTCAATATTGCTTTAAGA 58.888 34.615 10.76 12.52 0.00 2.10
501 502 7.325660 TCTGGCTCTTCAATATTGCTTTAAG 57.674 36.000 10.76 9.06 0.00 1.85
502 503 7.701539 TTCTGGCTCTTCAATATTGCTTTAA 57.298 32.000 10.76 0.00 0.00 1.52
503 504 7.886629 ATTCTGGCTCTTCAATATTGCTTTA 57.113 32.000 10.76 0.00 0.00 1.85
504 505 6.786967 ATTCTGGCTCTTCAATATTGCTTT 57.213 33.333 10.76 0.00 0.00 3.51
505 506 6.016443 GCTATTCTGGCTCTTCAATATTGCTT 60.016 38.462 10.76 0.00 0.00 3.91
506 507 5.472820 GCTATTCTGGCTCTTCAATATTGCT 59.527 40.000 10.76 0.00 0.00 3.91
507 508 5.240183 TGCTATTCTGGCTCTTCAATATTGC 59.760 40.000 10.76 0.00 0.00 3.56
508 509 6.072618 CCTGCTATTCTGGCTCTTCAATATTG 60.073 42.308 9.29 9.29 0.00 1.90
509 510 6.002704 CCTGCTATTCTGGCTCTTCAATATT 58.997 40.000 0.00 0.00 0.00 1.28
510 511 5.514484 CCCTGCTATTCTGGCTCTTCAATAT 60.514 44.000 0.00 0.00 32.89 1.28
511 512 4.202398 CCCTGCTATTCTGGCTCTTCAATA 60.202 45.833 0.00 0.00 32.89 1.90
512 513 3.434739 CCCTGCTATTCTGGCTCTTCAAT 60.435 47.826 0.00 0.00 32.89 2.57
513 514 2.092753 CCCTGCTATTCTGGCTCTTCAA 60.093 50.000 0.00 0.00 32.89 2.69
514 515 1.487976 CCCTGCTATTCTGGCTCTTCA 59.512 52.381 0.00 0.00 32.89 3.02
515 516 1.813477 GCCCTGCTATTCTGGCTCTTC 60.813 57.143 0.00 0.00 40.77 2.87
516 517 0.182299 GCCCTGCTATTCTGGCTCTT 59.818 55.000 0.00 0.00 40.77 2.85
517 518 1.704007 GGCCCTGCTATTCTGGCTCT 61.704 60.000 0.00 0.00 43.50 4.09
518 519 1.228094 GGCCCTGCTATTCTGGCTC 60.228 63.158 0.00 0.00 43.50 4.70
519 520 1.695597 AGGCCCTGCTATTCTGGCT 60.696 57.895 0.00 0.00 43.50 4.75
520 521 1.527844 CAGGCCCTGCTATTCTGGC 60.528 63.158 0.00 0.00 43.26 4.85
521 522 1.150081 CCAGGCCCTGCTATTCTGG 59.850 63.158 4.81 0.00 38.96 3.86
522 523 1.150081 CCCAGGCCCTGCTATTCTG 59.850 63.158 4.81 0.00 0.00 3.02
523 524 1.308216 ACCCAGGCCCTGCTATTCT 60.308 57.895 4.81 0.00 0.00 2.40
524 525 1.152881 CACCCAGGCCCTGCTATTC 60.153 63.158 4.81 0.00 0.00 1.75
525 526 3.010144 CACCCAGGCCCTGCTATT 58.990 61.111 4.81 0.00 0.00 1.73
526 527 3.813724 GCACCCAGGCCCTGCTAT 61.814 66.667 4.81 0.00 0.00 2.97
536 537 2.270352 TTTAGAACACCTGCACCCAG 57.730 50.000 0.00 0.00 38.85 4.45
537 538 2.738587 TTTTAGAACACCTGCACCCA 57.261 45.000 0.00 0.00 0.00 4.51
538 539 5.650543 CATATTTTTAGAACACCTGCACCC 58.349 41.667 0.00 0.00 0.00 4.61
539 540 5.102313 GCATATTTTTAGAACACCTGCACC 58.898 41.667 0.00 0.00 0.00 5.01
540 541 5.708948 TGCATATTTTTAGAACACCTGCAC 58.291 37.500 0.00 0.00 32.65 4.57
541 542 5.973899 TGCATATTTTTAGAACACCTGCA 57.026 34.783 0.00 0.00 34.98 4.41
542 543 5.979517 GGATGCATATTTTTAGAACACCTGC 59.020 40.000 0.00 0.00 0.00 4.85
543 544 7.099266 TGGATGCATATTTTTAGAACACCTG 57.901 36.000 0.00 0.00 0.00 4.00
544 545 7.014615 GGATGGATGCATATTTTTAGAACACCT 59.985 37.037 0.00 0.00 0.00 4.00
545 546 7.147976 GGATGGATGCATATTTTTAGAACACC 58.852 38.462 0.00 0.00 0.00 4.16
546 547 7.715657 TGGATGGATGCATATTTTTAGAACAC 58.284 34.615 0.00 0.00 0.00 3.32
547 548 7.894753 TGGATGGATGCATATTTTTAGAACA 57.105 32.000 0.00 0.00 0.00 3.18
548 549 9.768662 ATTTGGATGGATGCATATTTTTAGAAC 57.231 29.630 0.00 0.00 0.00 3.01
549 550 9.985730 GATTTGGATGGATGCATATTTTTAGAA 57.014 29.630 0.00 0.00 0.00 2.10
550 551 9.145442 TGATTTGGATGGATGCATATTTTTAGA 57.855 29.630 0.00 0.00 0.00 2.10
551 552 9.938280 ATGATTTGGATGGATGCATATTTTTAG 57.062 29.630 0.00 0.00 0.00 1.85
554 555 9.884636 CATATGATTTGGATGGATGCATATTTT 57.115 29.630 0.00 0.00 0.00 1.82
555 556 9.262240 TCATATGATTTGGATGGATGCATATTT 57.738 29.630 0.00 0.00 0.00 1.40
556 557 8.832458 TCATATGATTTGGATGGATGCATATT 57.168 30.769 0.00 0.00 0.00 1.28
557 558 7.505923 CCTCATATGATTTGGATGGATGCATAT 59.494 37.037 5.72 0.00 0.00 1.78
558 559 6.831868 CCTCATATGATTTGGATGGATGCATA 59.168 38.462 5.72 0.00 0.00 3.14
559 560 5.656859 CCTCATATGATTTGGATGGATGCAT 59.343 40.000 5.72 0.00 0.00 3.96
560 561 5.014202 CCTCATATGATTTGGATGGATGCA 58.986 41.667 5.72 0.00 0.00 3.96
561 562 4.142227 GCCTCATATGATTTGGATGGATGC 60.142 45.833 12.50 0.00 0.00 3.91
562 563 5.262009 AGCCTCATATGATTTGGATGGATG 58.738 41.667 12.50 0.00 0.00 3.51
563 564 5.531753 AGCCTCATATGATTTGGATGGAT 57.468 39.130 12.50 2.27 0.00 3.41
564 565 5.074804 CAAGCCTCATATGATTTGGATGGA 58.925 41.667 12.50 0.00 0.00 3.41
565 566 4.219944 CCAAGCCTCATATGATTTGGATGG 59.780 45.833 25.18 19.99 37.79 3.51
566 567 4.321750 GCCAAGCCTCATATGATTTGGATG 60.322 45.833 29.51 19.33 37.79 3.51
628 629 2.963782 GACGTCCCAGATATGGTAACCT 59.036 50.000 3.51 0.00 0.00 3.50
632 633 2.224606 GTCGACGTCCCAGATATGGTA 58.775 52.381 10.58 0.00 0.00 3.25
688 689 1.811359 CGAACTCCTTACGGACTGTCT 59.189 52.381 7.85 0.00 34.92 3.41
707 708 2.203056 TCATGGATCGCCTTGGCG 60.203 61.111 26.01 26.01 39.24 5.69
802 803 1.134694 GCCGCCGTCATTGAGAAAC 59.865 57.895 0.00 0.00 0.00 2.78
805 806 1.521457 GATGCCGCCGTCATTGAGA 60.521 57.895 0.00 0.00 0.00 3.27
810 811 2.512286 CACTGATGCCGCCGTCAT 60.512 61.111 0.00 0.00 36.45 3.06
816 817 2.515523 AGATGCCACTGATGCCGC 60.516 61.111 0.00 0.00 0.00 6.53
819 820 1.297664 GTCTCAGATGCCACTGATGC 58.702 55.000 9.72 3.90 44.32 3.91
865 878 1.681486 GGGTCTACCAGCAGAGAGGC 61.681 65.000 0.81 0.00 39.85 4.70
872 885 3.000819 CCCACGGGTCTACCAGCA 61.001 66.667 0.81 0.00 40.22 4.41
878 891 1.383943 ATCCATGCCCACGGGTCTA 60.384 57.895 3.54 0.00 37.65 2.59
901 914 0.320771 TTCAAGAAGCTCGTCCAGGC 60.321 55.000 0.00 0.00 0.00 4.85
904 917 1.686587 TCAGTTCAAGAAGCTCGTCCA 59.313 47.619 0.00 0.00 0.00 4.02
920 933 2.620115 CTGTTGTTGTTGCTGGATCAGT 59.380 45.455 0.00 0.00 33.43 3.41
932 948 2.418368 TCACCTTGAGCTGTTGTTGT 57.582 45.000 0.00 0.00 0.00 3.32
1004 1020 7.604545 TCGTATTGGTTCTCAATTGTGTCATAA 59.395 33.333 5.13 0.02 43.04 1.90
1049 1065 2.047465 ACTCCTTGCTCTGCTGCG 60.047 61.111 0.00 0.00 35.36 5.18
1113 1129 1.215382 GGTTTCCTCCGCCATTTGC 59.785 57.895 0.00 0.00 0.00 3.68
1127 1152 1.068352 ACCTCCTGCTCCCAAGGTTT 61.068 55.000 0.00 0.00 39.05 3.27
1141 1199 8.975663 ACAGGTAGCTTAAAATAATTACCTCC 57.024 34.615 0.00 0.00 38.97 4.30
1152 1210 5.451354 AGTTTGGGAACAGGTAGCTTAAAA 58.549 37.500 0.00 0.00 44.54 1.52
1192 1250 2.174639 TGTCAAACAGGGATGGAGTTGT 59.825 45.455 0.00 0.00 0.00 3.32
1353 1419 4.652881 AGGAGAAGTGCATGATCAGACATA 59.347 41.667 0.09 0.00 0.00 2.29
1415 1504 7.027161 ACGTATCTTTTATGTCATGCCAAAAC 58.973 34.615 0.00 0.00 0.00 2.43
1551 1649 2.550830 AGCGGTCTTGAGTGTTCATT 57.449 45.000 0.00 0.00 32.27 2.57
1567 1665 4.493220 CGAAAGCTTCCTTGAAGAATAGCG 60.493 45.833 0.00 1.36 41.71 4.26
1590 1691 4.326826 TCAACTGGTGGATTGTCATCTTC 58.673 43.478 0.00 0.00 0.00 2.87
1956 2069 4.924305 TGACAAGCTCTTTGAAATTGCT 57.076 36.364 0.00 0.12 39.21 3.91
2105 2227 8.034313 AGGGAGTTAGCTGATCATATAACAAA 57.966 34.615 22.44 1.65 31.90 2.83
2124 2246 0.991355 TTTGGTGGGTGTGAGGGAGT 60.991 55.000 0.00 0.00 0.00 3.85
2141 2263 3.756963 GGGAGAGCCAACGAACTTTATTT 59.243 43.478 0.00 0.00 35.15 1.40
2441 2575 7.414984 GGCAGAATCTCTATCTTGGTTTTTCTG 60.415 40.741 0.00 0.00 40.12 3.02
2513 2647 3.515602 ACACCTTCTTGGAGCTTGAAT 57.484 42.857 0.00 0.00 39.71 2.57
2539 2673 2.948979 TGTAGCTTATGCATTTTCCGGG 59.051 45.455 3.54 0.00 42.74 5.73
2626 2769 0.960364 GAGCCGTGCAAATCCTTGGA 60.960 55.000 0.00 0.00 32.76 3.53
2728 2874 1.753848 TTGGTGCTGCTGTTGCTGT 60.754 52.632 0.00 0.00 39.81 4.40
2780 4117 3.865745 CGTCCGTGCTTCTCTTGATAAAT 59.134 43.478 0.00 0.00 0.00 1.40
2855 4192 1.134220 AGGGACAAGTTCACGAGCAAA 60.134 47.619 0.00 0.00 29.99 3.68
3008 4348 1.070758 GCAAGAATATCCCCGCTCAGA 59.929 52.381 0.00 0.00 0.00 3.27
3072 4412 3.653344 CGAGTTTGTCCAGTTGAGATGA 58.347 45.455 0.00 0.00 0.00 2.92
3134 4474 6.275494 TCAGTAATGACTTCAACCACGATA 57.725 37.500 0.00 0.00 31.73 2.92
3201 4541 6.593382 CCATTTAGATCCTTACATAGCAGCTC 59.407 42.308 0.00 0.00 0.00 4.09
3326 4666 4.352887 CGCTCGTTTCCCTTTTGTTTTTA 58.647 39.130 0.00 0.00 0.00 1.52
3333 4673 1.566018 CGAGCGCTCGTTTCCCTTTT 61.566 55.000 43.16 3.83 46.99 2.27
3335 4675 2.432628 CGAGCGCTCGTTTCCCTT 60.433 61.111 43.16 4.68 46.99 3.95
3687 5029 1.270777 GCGTTGCATGAGTTGTGTGC 61.271 55.000 0.00 0.00 39.26 4.57
3882 5228 0.888619 CTTGACGTCTCTACTGGCCA 59.111 55.000 17.92 4.71 0.00 5.36
3966 5313 2.032290 GTCCTTACAACACTCGCAAACC 60.032 50.000 0.00 0.00 0.00 3.27
3988 5335 1.033746 CGCATGTTGGCCCAATCTCT 61.034 55.000 0.00 0.00 0.00 3.10
4028 5375 7.539712 ACTTCATGTCAAACCAGATTATACG 57.460 36.000 0.00 0.00 0.00 3.06
4166 5513 2.224769 TGAAGTTGGTTTAGCCCTCCTG 60.225 50.000 0.00 0.00 36.04 3.86
4400 5750 8.940397 AGTTTTCTTGGATCCATCTTCTTAAA 57.060 30.769 17.06 6.89 0.00 1.52


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.