Multiple sequence alignment - TraesCS4A01G460900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G460900 chr4A 100.000 2636 0 0 1 2636 725894810 725892175 0.000000e+00 4868.0
1 TraesCS4A01G460900 chr4A 90.476 168 14 1 2218 2383 729701868 729702035 1.230000e-53 220.0
2 TraesCS4A01G460900 chr7D 94.089 1421 62 9 1 1402 49208536 49207119 0.000000e+00 2139.0
3 TraesCS4A01G460900 chr7D 94.503 1146 45 6 1 1130 12149524 12150667 0.000000e+00 1751.0
4 TraesCS4A01G460900 chr7D 91.105 742 55 5 1374 2110 12150844 12151579 0.000000e+00 994.0
5 TraesCS4A01G460900 chr7D 91.821 379 28 1 1399 1774 49205508 49205130 2.320000e-145 525.0
6 TraesCS4A01G460900 chr7D 89.272 261 27 1 2376 2636 49194727 49194468 2.530000e-85 326.0
7 TraesCS4A01G460900 chr7D 96.809 188 6 0 1158 1345 12150662 12150849 5.480000e-82 315.0
8 TraesCS4A01G460900 chr7D 90.541 222 20 1 1843 2063 49205127 49204906 2.570000e-75 292.0
9 TraesCS4A01G460900 chr7A 90.719 1627 119 19 138 1755 11438817 11440420 0.000000e+00 2139.0
10 TraesCS4A01G460900 chr3A 93.210 162 9 2 2220 2379 745098112 745098273 1.220000e-58 237.0
11 TraesCS4A01G460900 chr3A 92.593 162 10 2 2220 2379 745031201 745031362 5.670000e-57 231.0
12 TraesCS4A01G460900 chr3A 91.975 162 11 2 2220 2379 744958275 744958436 2.640000e-55 226.0
13 TraesCS4A01G460900 chr5D 91.975 162 11 2 2220 2379 151671548 151671709 2.640000e-55 226.0
14 TraesCS4A01G460900 chr5D 86.301 73 10 0 2378 2450 416829962 416829890 2.170000e-11 80.5
15 TraesCS4A01G460900 chr6D 91.463 164 12 2 2218 2379 196767459 196767296 9.490000e-55 224.0
16 TraesCS4A01G460900 chr3D 90.058 171 14 2 2215 2383 520636818 520636987 4.420000e-53 219.0
17 TraesCS4A01G460900 chr4B 88.398 181 19 1 2213 2391 586317491 586317311 1.590000e-52 217.0
18 TraesCS4A01G460900 chr2D 88.172 186 17 5 2200 2382 314043903 314044086 1.590000e-52 217.0
19 TraesCS4A01G460900 chr5B 85.714 77 9 2 2379 2454 503892885 503892810 2.170000e-11 80.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G460900 chr4A 725892175 725894810 2635 True 4868.000000 4868 100.000000 1 2636 1 chr4A.!!$R1 2635
1 TraesCS4A01G460900 chr7D 12149524 12151579 2055 False 1020.000000 1751 94.139000 1 2110 3 chr7D.!!$F1 2109
2 TraesCS4A01G460900 chr7D 49204906 49208536 3630 True 985.333333 2139 92.150333 1 2063 3 chr7D.!!$R2 2062
3 TraesCS4A01G460900 chr7A 11438817 11440420 1603 False 2139.000000 2139 90.719000 138 1755 1 chr7A.!!$F1 1617

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
920 948 1.115467 AAACCGCACACCCATTTCAA 58.885 45.0 0.0 0.0 0.0 2.69 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2161 3808 0.031585 ACGTGCAGTTGCGTCTAGAA 59.968 50.0 0.0 0.0 45.83 2.1 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
381 399 9.753669 CAAAAACTGATGTAAGAAACCAAAAAC 57.246 29.630 0.00 0.00 0.00 2.43
463 490 2.107031 AGCCTAGCACATATTGATGCCA 59.893 45.455 0.00 0.00 43.12 4.92
469 496 3.955551 AGCACATATTGATGCCACATCAA 59.044 39.130 21.47 21.47 43.12 2.57
540 567 7.175104 TCCACAAAGCTATGGAAGTTAGATTT 58.825 34.615 10.98 0.00 42.14 2.17
576 603 8.881733 AGAGGAGATCTAGAATGAGCATCAACC 61.882 44.444 0.00 0.00 43.23 3.77
787 815 8.877779 CATTTATGGCTATGCACTAGAAGTATC 58.122 37.037 0.00 0.00 0.00 2.24
826 854 3.296854 AGTGAGTGTCAACAGGTCTGTA 58.703 45.455 3.87 0.00 44.13 2.74
861 889 3.554934 GATACTGCATTCATGAACCCCA 58.445 45.455 11.07 7.26 0.00 4.96
874 902 7.684317 TCATGAACCCCAACTATATGAACTA 57.316 36.000 0.00 0.00 0.00 2.24
911 939 1.400494 GGTATCCATCAAACCGCACAC 59.600 52.381 0.00 0.00 0.00 3.82
920 948 1.115467 AAACCGCACACCCATTTCAA 58.885 45.000 0.00 0.00 0.00 2.69
934 962 2.489938 TTTCAACCTTAGGCATCGCT 57.510 45.000 0.00 0.00 0.00 4.93
951 979 4.794278 TCGCTTACACACTTATCCTCAA 57.206 40.909 0.00 0.00 0.00 3.02
1033 1061 2.474410 AACGACCACCATCTTCTTCC 57.526 50.000 0.00 0.00 0.00 3.46
1085 1113 4.566759 GTCAATTGTTGCTCATACTAGCGA 59.433 41.667 5.13 0.00 45.85 4.93
1104 1132 0.542467 ATGATGTTGGTGGCAAGCCA 60.542 50.000 10.24 10.24 45.02 4.75
1131 1159 0.366871 CCGATTTCGTGACAGAAGCG 59.633 55.000 0.00 0.00 37.74 4.68
1156 1184 1.893801 AGAACGCTACAGCCAACTACT 59.106 47.619 0.00 0.00 37.91 2.57
1197 1225 3.611766 CGGAGAAATTCTGTGTCTCGACA 60.612 47.826 0.00 0.00 38.97 4.35
1439 3081 3.066190 CTACCGTGGCCCTGACGA 61.066 66.667 15.15 0.00 39.21 4.20
1458 3100 2.033448 GGTGACAACGATGGGCCA 59.967 61.111 9.61 9.61 0.00 5.36
1486 3128 2.042686 TATGCTCCCTCAATGTGTGC 57.957 50.000 0.00 0.00 0.00 4.57
1530 3172 1.144716 CTGCGGGCATGAGCTTCTA 59.855 57.895 0.00 0.00 41.70 2.10
1537 3179 3.549794 GGGCATGAGCTTCTAGATTTGT 58.450 45.455 0.00 0.00 41.70 2.83
1707 3352 8.894768 AATAATGAGAGGTTGCTACATCTTAC 57.105 34.615 16.18 5.91 44.83 2.34
1719 3364 9.587772 GTTGCTACATCTTACTCTATTGAGAAA 57.412 33.333 11.29 0.00 42.73 2.52
1763 3408 3.273434 TGAACCACTGAATCTATGCAGC 58.727 45.455 0.00 0.00 35.57 5.25
1774 3419 1.935873 TCTATGCAGCGATTTGTGCTC 59.064 47.619 0.00 0.00 41.72 4.26
1776 3421 0.169672 ATGCAGCGATTTGTGCTCAC 59.830 50.000 0.00 0.00 41.72 3.51
1828 3473 3.380004 TGCGAGTTTTATGCCCCTTTATG 59.620 43.478 0.00 0.00 0.00 1.90
1831 3476 3.704061 GAGTTTTATGCCCCTTTATGCCA 59.296 43.478 0.00 0.00 0.00 4.92
1838 3483 4.479786 TGCCCCTTTATGCCATTTTTAC 57.520 40.909 0.00 0.00 0.00 2.01
1839 3484 4.100373 TGCCCCTTTATGCCATTTTTACT 58.900 39.130 0.00 0.00 0.00 2.24
1840 3485 4.534103 TGCCCCTTTATGCCATTTTTACTT 59.466 37.500 0.00 0.00 0.00 2.24
1841 3486 5.013599 TGCCCCTTTATGCCATTTTTACTTT 59.986 36.000 0.00 0.00 0.00 2.66
1887 3532 3.352524 GCTGCATGCTCATAGCCC 58.647 61.111 20.33 0.00 41.51 5.19
1926 3571 4.568229 CATAAATGCCTATCTACACGCG 57.432 45.455 3.53 3.53 0.00 6.01
1927 3572 2.596904 AAATGCCTATCTACACGCGT 57.403 45.000 5.58 5.58 0.00 6.01
1928 3573 1.852942 AATGCCTATCTACACGCGTG 58.147 50.000 35.99 35.99 0.00 5.34
1960 3605 0.165944 GCCAGCACACGATTACACAC 59.834 55.000 0.00 0.00 0.00 3.82
1966 3611 2.736721 GCACACGATTACACACATGTCT 59.263 45.455 0.00 0.00 40.48 3.41
1974 3619 5.163854 CGATTACACACATGTCTCCTTTTCC 60.164 44.000 0.00 0.00 40.48 3.13
1997 3642 7.836842 TCCCTTTTTATCCTTTTTGTAGATGC 58.163 34.615 0.00 0.00 0.00 3.91
2043 3688 7.591057 TGCTCTTATTTTCATTTTGTTCTGACG 59.409 33.333 0.00 0.00 0.00 4.35
2051 3697 3.579147 TTTTGTTCTGACGCGTTACTG 57.421 42.857 15.53 5.79 0.00 2.74
2059 3705 0.361184 GACGCGTTACTGTAGTTGCG 59.639 55.000 15.53 20.86 43.48 4.85
2104 3751 5.869350 AGTTGTGAAGATACTTATTTGCGC 58.131 37.500 0.00 0.00 0.00 6.09
2110 3757 5.411361 TGAAGATACTTATTTGCGCACAACT 59.589 36.000 11.12 0.00 34.87 3.16
2111 3758 6.592220 TGAAGATACTTATTTGCGCACAACTA 59.408 34.615 11.12 0.00 34.87 2.24
2112 3759 7.279981 TGAAGATACTTATTTGCGCACAACTAT 59.720 33.333 11.12 3.73 34.87 2.12
2113 3760 7.553881 AGATACTTATTTGCGCACAACTATT 57.446 32.000 11.12 0.00 34.87 1.73
2114 3761 7.630924 AGATACTTATTTGCGCACAACTATTC 58.369 34.615 11.12 1.39 34.87 1.75
2115 3762 5.880054 ACTTATTTGCGCACAACTATTCT 57.120 34.783 11.12 0.00 34.87 2.40
2116 3763 6.254281 ACTTATTTGCGCACAACTATTCTT 57.746 33.333 11.12 0.00 34.87 2.52
2117 3764 6.677913 ACTTATTTGCGCACAACTATTCTTT 58.322 32.000 11.12 0.00 34.87 2.52
2118 3765 7.145323 ACTTATTTGCGCACAACTATTCTTTT 58.855 30.769 11.12 0.00 34.87 2.27
2119 3766 5.827568 ATTTGCGCACAACTATTCTTTTG 57.172 34.783 11.12 0.00 34.87 2.44
2120 3767 3.980646 TGCGCACAACTATTCTTTTGT 57.019 38.095 5.66 0.00 36.35 2.83
2121 3768 3.884169 TGCGCACAACTATTCTTTTGTC 58.116 40.909 5.66 0.00 33.59 3.18
2122 3769 2.902484 GCGCACAACTATTCTTTTGTCG 59.098 45.455 0.30 0.00 33.59 4.35
2123 3770 3.606153 GCGCACAACTATTCTTTTGTCGT 60.606 43.478 0.30 0.00 33.59 4.34
2124 3771 4.141680 CGCACAACTATTCTTTTGTCGTC 58.858 43.478 0.00 0.00 33.59 4.20
2125 3772 4.084537 CGCACAACTATTCTTTTGTCGTCT 60.085 41.667 0.00 0.00 33.59 4.18
2126 3773 5.118050 CGCACAACTATTCTTTTGTCGTCTA 59.882 40.000 0.00 0.00 33.59 2.59
2127 3774 6.297353 GCACAACTATTCTTTTGTCGTCTAC 58.703 40.000 0.00 0.00 33.59 2.59
2128 3775 6.073980 GCACAACTATTCTTTTGTCGTCTACA 60.074 38.462 0.00 0.00 33.59 2.74
2129 3776 7.517734 GCACAACTATTCTTTTGTCGTCTACAA 60.518 37.037 0.00 0.00 46.41 2.41
2137 3784 2.624316 TGTCGTCTACAATCACGTCC 57.376 50.000 0.00 0.00 37.30 4.79
2138 3785 1.881324 TGTCGTCTACAATCACGTCCA 59.119 47.619 0.00 0.00 37.30 4.02
2139 3786 2.095415 TGTCGTCTACAATCACGTCCAG 60.095 50.000 0.00 0.00 37.30 3.86
2140 3787 2.095364 GTCGTCTACAATCACGTCCAGT 60.095 50.000 0.00 0.00 37.30 4.00
2141 3788 6.611825 TGTCGTCTACAATCACGTCCAGTG 62.612 50.000 0.00 0.00 43.07 3.66
2157 3804 3.245650 TGGCCTGCCACAACTGTA 58.754 55.556 6.80 0.00 41.89 2.74
2158 3805 1.228124 TGGCCTGCCACAACTGTAC 60.228 57.895 6.80 0.00 41.89 2.90
2159 3806 1.228124 GGCCTGCCACAACTGTACA 60.228 57.895 2.58 0.00 35.81 2.90
2160 3807 0.609131 GGCCTGCCACAACTGTACAT 60.609 55.000 2.58 0.00 35.81 2.29
2161 3808 1.247567 GCCTGCCACAACTGTACATT 58.752 50.000 0.00 0.00 0.00 2.71
2162 3809 1.613437 GCCTGCCACAACTGTACATTT 59.387 47.619 0.00 0.00 0.00 2.32
2163 3810 2.351738 GCCTGCCACAACTGTACATTTC 60.352 50.000 0.00 0.00 0.00 2.17
2164 3811 3.149196 CCTGCCACAACTGTACATTTCT 58.851 45.455 0.00 0.00 0.00 2.52
2165 3812 4.323417 CCTGCCACAACTGTACATTTCTA 58.677 43.478 0.00 0.00 0.00 2.10
2166 3813 4.393062 CCTGCCACAACTGTACATTTCTAG 59.607 45.833 0.00 0.00 0.00 2.43
2167 3814 5.222079 TGCCACAACTGTACATTTCTAGA 57.778 39.130 0.00 0.00 0.00 2.43
2168 3815 4.994852 TGCCACAACTGTACATTTCTAGAC 59.005 41.667 0.00 0.00 0.00 2.59
2169 3816 4.091509 GCCACAACTGTACATTTCTAGACG 59.908 45.833 0.00 0.00 0.00 4.18
2170 3817 4.091509 CCACAACTGTACATTTCTAGACGC 59.908 45.833 0.00 0.00 0.00 5.19
2171 3818 4.684242 CACAACTGTACATTTCTAGACGCA 59.316 41.667 0.00 0.00 0.00 5.24
2172 3819 5.176774 CACAACTGTACATTTCTAGACGCAA 59.823 40.000 0.00 0.00 0.00 4.85
2173 3820 5.176958 ACAACTGTACATTTCTAGACGCAAC 59.823 40.000 0.00 0.00 0.00 4.17
2174 3821 5.135508 ACTGTACATTTCTAGACGCAACT 57.864 39.130 0.00 0.00 0.00 3.16
2175 3822 4.923871 ACTGTACATTTCTAGACGCAACTG 59.076 41.667 0.00 0.00 0.00 3.16
2176 3823 3.678072 TGTACATTTCTAGACGCAACTGC 59.322 43.478 0.00 0.00 37.78 4.40
2177 3824 2.766313 ACATTTCTAGACGCAACTGCA 58.234 42.857 2.12 0.00 42.21 4.41
2178 3825 2.480419 ACATTTCTAGACGCAACTGCAC 59.520 45.455 2.12 0.00 42.21 4.57
2179 3826 1.136690 TTTCTAGACGCAACTGCACG 58.863 50.000 2.12 0.00 42.21 5.34
2180 3827 0.031585 TTCTAGACGCAACTGCACGT 59.968 50.000 0.00 0.00 46.91 4.49
2184 3831 2.202878 ACGCAACTGCACGTCTGT 60.203 55.556 2.12 0.00 38.28 3.41
2185 3832 1.813753 ACGCAACTGCACGTCTGTT 60.814 52.632 2.12 0.00 38.28 3.16
2186 3833 1.351707 CGCAACTGCACGTCTGTTT 59.648 52.632 2.12 0.00 42.21 2.83
2187 3834 0.925267 CGCAACTGCACGTCTGTTTG 60.925 55.000 2.12 1.33 42.21 2.93
2188 3835 0.098728 GCAACTGCACGTCTGTTTGT 59.901 50.000 0.00 0.00 41.59 2.83
2189 3836 1.467374 GCAACTGCACGTCTGTTTGTT 60.467 47.619 0.00 0.00 41.59 2.83
2190 3837 2.176369 CAACTGCACGTCTGTTTGTTG 58.824 47.619 7.27 0.00 35.09 3.33
2191 3838 1.448985 ACTGCACGTCTGTTTGTTGT 58.551 45.000 0.00 0.00 0.00 3.32
2192 3839 1.130373 ACTGCACGTCTGTTTGTTGTG 59.870 47.619 0.00 0.00 0.00 3.33
2194 3841 3.986374 CACGTCTGTTTGTTGTGCA 57.014 47.368 0.00 0.00 0.00 4.57
2195 3842 2.473530 CACGTCTGTTTGTTGTGCAT 57.526 45.000 0.00 0.00 0.00 3.96
2196 3843 2.110990 CACGTCTGTTTGTTGTGCATG 58.889 47.619 0.00 0.00 0.00 4.06
2197 3844 1.122849 CGTCTGTTTGTTGTGCATGC 58.877 50.000 11.82 11.82 0.00 4.06
2198 3845 1.122849 GTCTGTTTGTTGTGCATGCG 58.877 50.000 14.09 0.00 0.00 4.73
2199 3846 0.594540 TCTGTTTGTTGTGCATGCGC 60.595 50.000 24.25 24.25 39.24 6.09
2200 3847 1.550659 CTGTTTGTTGTGCATGCGCC 61.551 55.000 27.42 14.10 37.32 6.53
2201 3848 1.591059 GTTTGTTGTGCATGCGCCA 60.591 52.632 27.42 15.15 37.32 5.69
2202 3849 1.300003 TTTGTTGTGCATGCGCCAG 60.300 52.632 27.42 0.00 37.32 4.85
2203 3850 2.696409 TTTGTTGTGCATGCGCCAGG 62.696 55.000 27.42 0.00 37.32 4.45
2204 3851 3.364441 GTTGTGCATGCGCCAGGA 61.364 61.111 27.42 6.85 37.32 3.86
2205 3852 3.364441 TTGTGCATGCGCCAGGAC 61.364 61.111 27.42 12.43 37.32 3.85
2209 3856 4.830765 GCATGCGCCAGGACGGTA 62.831 66.667 4.18 0.00 36.97 4.02
2210 3857 2.586079 CATGCGCCAGGACGGTAG 60.586 66.667 4.18 0.00 36.97 3.18
2211 3858 2.758327 ATGCGCCAGGACGGTAGA 60.758 61.111 4.18 0.00 36.97 2.59
2212 3859 2.355986 ATGCGCCAGGACGGTAGAA 61.356 57.895 4.18 0.00 36.97 2.10
2213 3860 1.686325 ATGCGCCAGGACGGTAGAAT 61.686 55.000 4.18 0.00 36.97 2.40
2214 3861 1.038681 TGCGCCAGGACGGTAGAATA 61.039 55.000 4.18 0.00 36.97 1.75
2215 3862 0.318784 GCGCCAGGACGGTAGAATAG 60.319 60.000 0.00 0.00 36.97 1.73
2216 3863 1.315690 CGCCAGGACGGTAGAATAGA 58.684 55.000 0.00 0.00 36.97 1.98
2217 3864 1.679680 CGCCAGGACGGTAGAATAGAA 59.320 52.381 0.00 0.00 36.97 2.10
2218 3865 2.287668 CGCCAGGACGGTAGAATAGAAG 60.288 54.545 0.00 0.00 36.97 2.85
2219 3866 2.694109 GCCAGGACGGTAGAATAGAAGT 59.306 50.000 0.00 0.00 36.97 3.01
2220 3867 3.887716 GCCAGGACGGTAGAATAGAAGTA 59.112 47.826 0.00 0.00 36.97 2.24
2221 3868 4.261530 GCCAGGACGGTAGAATAGAAGTAC 60.262 50.000 0.00 0.00 36.97 2.73
2222 3869 5.131784 CCAGGACGGTAGAATAGAAGTACT 58.868 45.833 0.00 0.00 0.00 2.73
2223 3870 5.239087 CCAGGACGGTAGAATAGAAGTACTC 59.761 48.000 0.00 0.00 0.00 2.59
2224 3871 5.239087 CAGGACGGTAGAATAGAAGTACTCC 59.761 48.000 0.00 0.00 0.00 3.85
2225 3872 4.518590 GGACGGTAGAATAGAAGTACTCCC 59.481 50.000 0.00 0.00 0.00 4.30
2226 3873 5.375773 GACGGTAGAATAGAAGTACTCCCT 58.624 45.833 0.00 0.00 0.00 4.20
2227 3874 5.764432 ACGGTAGAATAGAAGTACTCCCTT 58.236 41.667 0.00 0.00 0.00 3.95
2228 3875 5.827267 ACGGTAGAATAGAAGTACTCCCTTC 59.173 44.000 0.00 0.00 40.95 3.46
2229 3876 5.826737 CGGTAGAATAGAAGTACTCCCTTCA 59.173 44.000 0.00 0.00 42.68 3.02
2230 3877 6.490721 CGGTAGAATAGAAGTACTCCCTTCAT 59.509 42.308 0.00 0.00 42.68 2.57
2231 3878 7.014422 CGGTAGAATAGAAGTACTCCCTTCATT 59.986 40.741 0.00 0.00 42.68 2.57
2232 3879 8.361889 GGTAGAATAGAAGTACTCCCTTCATTC 58.638 40.741 0.00 4.62 42.68 2.67
2233 3880 7.368198 AGAATAGAAGTACTCCCTTCATTCC 57.632 40.000 0.00 0.00 42.68 3.01
2234 3881 7.136203 AGAATAGAAGTACTCCCTTCATTCCT 58.864 38.462 0.00 0.00 42.68 3.36
2235 3882 8.290277 AGAATAGAAGTACTCCCTTCATTCCTA 58.710 37.037 0.00 0.00 42.68 2.94
2236 3883 8.855804 AATAGAAGTACTCCCTTCATTCCTAA 57.144 34.615 0.00 0.00 42.68 2.69
2237 3884 8.855804 ATAGAAGTACTCCCTTCATTCCTAAA 57.144 34.615 0.00 0.00 42.68 1.85
2238 3885 7.757242 AGAAGTACTCCCTTCATTCCTAAAT 57.243 36.000 0.00 0.00 42.68 1.40
2239 3886 8.855804 AGAAGTACTCCCTTCATTCCTAAATA 57.144 34.615 0.00 0.00 42.68 1.40
2240 3887 9.453830 AGAAGTACTCCCTTCATTCCTAAATAT 57.546 33.333 0.00 0.00 42.68 1.28
2246 3893 9.453830 ACTCCCTTCATTCCTAAATATAAGTCT 57.546 33.333 0.00 0.00 0.00 3.24
2265 3912 9.829507 ATAAGTCTTTGGAGAGATTTCACTATG 57.170 33.333 0.00 0.00 31.07 2.23
2266 3913 6.648192 AGTCTTTGGAGAGATTTCACTATGG 58.352 40.000 0.00 0.00 31.07 2.74
2267 3914 6.441924 AGTCTTTGGAGAGATTTCACTATGGA 59.558 38.462 0.00 0.00 31.07 3.41
2268 3915 6.536941 GTCTTTGGAGAGATTTCACTATGGAC 59.463 42.308 0.00 0.00 31.07 4.02
2269 3916 6.441924 TCTTTGGAGAGATTTCACTATGGACT 59.558 38.462 0.00 0.00 0.00 3.85
2270 3917 7.619698 TCTTTGGAGAGATTTCACTATGGACTA 59.380 37.037 0.00 0.00 0.00 2.59
2271 3918 7.921041 TTGGAGAGATTTCACTATGGACTAT 57.079 36.000 0.00 0.00 0.00 2.12
2272 3919 9.434275 TTTGGAGAGATTTCACTATGGACTATA 57.566 33.333 0.00 0.00 0.00 1.31
2273 3920 9.607333 TTGGAGAGATTTCACTATGGACTATAT 57.393 33.333 0.00 0.00 0.00 0.86
2277 3924 9.961264 AGAGATTTCACTATGGACTATATACGA 57.039 33.333 0.00 0.00 0.00 3.43
2280 3927 9.291664 GATTTCACTATGGACTATATACGAAGC 57.708 37.037 0.00 0.00 0.00 3.86
2281 3928 7.754851 TTCACTATGGACTATATACGAAGCA 57.245 36.000 0.00 0.00 0.00 3.91
2282 3929 7.754851 TCACTATGGACTATATACGAAGCAA 57.245 36.000 0.00 0.00 0.00 3.91
2283 3930 8.173542 TCACTATGGACTATATACGAAGCAAA 57.826 34.615 0.00 0.00 0.00 3.68
2284 3931 8.635328 TCACTATGGACTATATACGAAGCAAAA 58.365 33.333 0.00 0.00 0.00 2.44
2285 3932 9.424319 CACTATGGACTATATACGAAGCAAAAT 57.576 33.333 0.00 0.00 0.00 1.82
2286 3933 9.424319 ACTATGGACTATATACGAAGCAAAATG 57.576 33.333 0.00 0.00 0.00 2.32
2287 3934 9.639601 CTATGGACTATATACGAAGCAAAATGA 57.360 33.333 0.00 0.00 0.00 2.57
2288 3935 7.946655 TGGACTATATACGAAGCAAAATGAG 57.053 36.000 0.00 0.00 0.00 2.90
2289 3936 7.497595 TGGACTATATACGAAGCAAAATGAGT 58.502 34.615 0.00 0.00 0.00 3.41
2290 3937 7.438160 TGGACTATATACGAAGCAAAATGAGTG 59.562 37.037 0.00 0.00 0.00 3.51
2291 3938 7.652105 GGACTATATACGAAGCAAAATGAGTGA 59.348 37.037 0.00 0.00 0.00 3.41
2292 3939 8.942338 ACTATATACGAAGCAAAATGAGTGAA 57.058 30.769 0.00 0.00 0.00 3.18
2293 3940 9.547753 ACTATATACGAAGCAAAATGAGTGAAT 57.452 29.630 0.00 0.00 0.00 2.57
2295 3942 6.992063 ATACGAAGCAAAATGAGTGAATCT 57.008 33.333 0.00 0.00 0.00 2.40
2296 3943 9.764363 ATATACGAAGCAAAATGAGTGAATCTA 57.236 29.630 0.00 0.00 0.00 1.98
2297 3944 6.992063 ACGAAGCAAAATGAGTGAATCTAT 57.008 33.333 0.00 0.00 0.00 1.98
2298 3945 9.764363 ATACGAAGCAAAATGAGTGAATCTATA 57.236 29.630 0.00 0.00 0.00 1.31
2299 3946 7.910304 ACGAAGCAAAATGAGTGAATCTATAC 58.090 34.615 0.00 0.00 0.00 1.47
2300 3947 7.766278 ACGAAGCAAAATGAGTGAATCTATACT 59.234 33.333 0.00 0.00 0.00 2.12
2301 3948 8.272176 CGAAGCAAAATGAGTGAATCTATACTC 58.728 37.037 0.00 0.00 42.77 2.59
2302 3949 9.323985 GAAGCAAAATGAGTGAATCTATACTCT 57.676 33.333 0.00 0.00 42.86 3.24
2304 3951 9.757227 AGCAAAATGAGTGAATCTATACTCTAC 57.243 33.333 0.00 0.00 42.86 2.59
2305 3952 9.534565 GCAAAATGAGTGAATCTATACTCTACA 57.465 33.333 0.00 0.00 42.86 2.74
2309 3956 9.703892 AATGAGTGAATCTATACTCTACAATGC 57.296 33.333 0.00 0.00 42.86 3.56
2310 3957 8.237811 TGAGTGAATCTATACTCTACAATGCA 57.762 34.615 0.00 0.00 42.86 3.96
2311 3958 8.864087 TGAGTGAATCTATACTCTACAATGCAT 58.136 33.333 0.00 0.00 42.86 3.96
2312 3959 9.703892 GAGTGAATCTATACTCTACAATGCATT 57.296 33.333 5.99 5.99 40.06 3.56
2333 3980 9.836864 TGCATTTAGATATATCCATATGTGGTC 57.163 33.333 8.51 0.00 46.16 4.02
2334 3981 9.277783 GCATTTAGATATATCCATATGTGGTCC 57.722 37.037 8.51 0.00 46.16 4.46
2340 3987 9.152327 AGATATATCCATATGTGGTCCATAGTG 57.848 37.037 8.51 0.00 46.16 2.74
2341 3988 9.147732 GATATATCCATATGTGGTCCATAGTGA 57.852 37.037 8.51 0.00 46.16 3.41
2342 3989 7.813087 ATATCCATATGTGGTCCATAGTGAA 57.187 36.000 8.51 0.00 46.16 3.18
2343 3990 5.966853 TCCATATGTGGTCCATAGTGAAA 57.033 39.130 8.51 0.00 46.16 2.69
2344 3991 6.514012 TCCATATGTGGTCCATAGTGAAAT 57.486 37.500 8.51 0.00 46.16 2.17
2345 3992 6.533730 TCCATATGTGGTCCATAGTGAAATC 58.466 40.000 8.51 0.00 46.16 2.17
2346 3993 6.329986 TCCATATGTGGTCCATAGTGAAATCT 59.670 38.462 8.51 0.00 46.16 2.40
2347 3994 6.652481 CCATATGTGGTCCATAGTGAAATCTC 59.348 42.308 0.00 0.00 39.36 2.75
2348 3995 5.965033 ATGTGGTCCATAGTGAAATCTCT 57.035 39.130 0.00 0.00 29.82 3.10
2349 3996 8.588472 CATATGTGGTCCATAGTGAAATCTCTA 58.412 37.037 0.00 0.00 39.36 2.43
2350 3997 7.623999 ATGTGGTCCATAGTGAAATCTCTAT 57.376 36.000 0.00 0.37 34.17 1.98
2351 3998 8.727100 ATGTGGTCCATAGTGAAATCTCTATA 57.273 34.615 0.00 0.00 33.04 1.31
2352 3999 8.547481 TGTGGTCCATAGTGAAATCTCTATAA 57.453 34.615 0.00 0.00 33.04 0.98
2353 4000 8.988060 TGTGGTCCATAGTGAAATCTCTATAAA 58.012 33.333 0.00 0.00 33.04 1.40
2354 4001 9.482627 GTGGTCCATAGTGAAATCTCTATAAAG 57.517 37.037 0.00 0.00 33.04 1.85
2355 4002 9.434275 TGGTCCATAGTGAAATCTCTATAAAGA 57.566 33.333 5.06 1.84 33.04 2.52
2356 4003 9.699703 GGTCCATAGTGAAATCTCTATAAAGAC 57.300 37.037 5.06 10.50 33.04 3.01
2387 4034 8.964476 TTTAGAAAGAGGGAGTAAATAGCATG 57.036 34.615 0.00 0.00 0.00 4.06
2388 4035 6.567602 AGAAAGAGGGAGTAAATAGCATGT 57.432 37.500 0.00 0.00 0.00 3.21
2389 4036 6.352516 AGAAAGAGGGAGTAAATAGCATGTG 58.647 40.000 0.00 0.00 0.00 3.21
2390 4037 4.696479 AGAGGGAGTAAATAGCATGTGG 57.304 45.455 0.00 0.00 0.00 4.17
2391 4038 3.392616 AGAGGGAGTAAATAGCATGTGGG 59.607 47.826 0.00 0.00 0.00 4.61
2392 4039 3.123273 AGGGAGTAAATAGCATGTGGGT 58.877 45.455 0.00 0.00 0.00 4.51
2393 4040 3.527665 AGGGAGTAAATAGCATGTGGGTT 59.472 43.478 0.00 0.00 0.00 4.11
2394 4041 3.632145 GGGAGTAAATAGCATGTGGGTTG 59.368 47.826 0.00 0.00 0.00 3.77
2395 4042 3.632145 GGAGTAAATAGCATGTGGGTTGG 59.368 47.826 0.00 0.00 0.00 3.77
2396 4043 4.270008 GAGTAAATAGCATGTGGGTTGGT 58.730 43.478 0.00 0.00 0.00 3.67
2397 4044 4.270008 AGTAAATAGCATGTGGGTTGGTC 58.730 43.478 0.00 0.00 0.00 4.02
2398 4045 3.456380 AAATAGCATGTGGGTTGGTCT 57.544 42.857 0.00 0.00 0.00 3.85
2399 4046 3.456380 AATAGCATGTGGGTTGGTCTT 57.544 42.857 0.00 0.00 0.00 3.01
2400 4047 2.489938 TAGCATGTGGGTTGGTCTTC 57.510 50.000 0.00 0.00 0.00 2.87
2401 4048 0.251341 AGCATGTGGGTTGGTCTTCC 60.251 55.000 0.00 0.00 0.00 3.46
2402 4049 0.539438 GCATGTGGGTTGGTCTTCCA 60.539 55.000 0.00 0.00 42.66 3.53
2417 4064 7.425224 TGGTCTTCCAAAATCCAAAAGTAAA 57.575 32.000 0.00 0.00 41.25 2.01
2418 4065 8.028652 TGGTCTTCCAAAATCCAAAAGTAAAT 57.971 30.769 0.00 0.00 41.25 1.40
2419 4066 7.930865 TGGTCTTCCAAAATCCAAAAGTAAATG 59.069 33.333 0.00 0.00 41.25 2.32
2420 4067 7.931407 GGTCTTCCAAAATCCAAAAGTAAATGT 59.069 33.333 0.00 0.00 0.00 2.71
2421 4068 8.764287 GTCTTCCAAAATCCAAAAGTAAATGTG 58.236 33.333 0.00 0.00 0.00 3.21
2422 4069 8.482128 TCTTCCAAAATCCAAAAGTAAATGTGT 58.518 29.630 0.00 0.00 0.00 3.72
2423 4070 9.757227 CTTCCAAAATCCAAAAGTAAATGTGTA 57.243 29.630 0.00 0.00 0.00 2.90
2424 4071 9.757227 TTCCAAAATCCAAAAGTAAATGTGTAG 57.243 29.630 0.00 0.00 0.00 2.74
2425 4072 8.919145 TCCAAAATCCAAAAGTAAATGTGTAGT 58.081 29.630 0.00 0.00 0.00 2.73
2426 4073 8.977505 CCAAAATCCAAAAGTAAATGTGTAGTG 58.022 33.333 0.00 0.00 0.00 2.74
2427 4074 9.528018 CAAAATCCAAAAGTAAATGTGTAGTGT 57.472 29.630 0.00 0.00 0.00 3.55
2430 4077 8.911918 ATCCAAAAGTAAATGTGTAGTGTACA 57.088 30.769 0.00 0.00 36.08 2.90
2431 4078 8.734218 TCCAAAAGTAAATGTGTAGTGTACAA 57.266 30.769 0.00 0.00 40.93 2.41
2432 4079 9.175312 TCCAAAAGTAAATGTGTAGTGTACAAA 57.825 29.630 0.00 0.00 40.93 2.83
2433 4080 9.959749 CCAAAAGTAAATGTGTAGTGTACAAAT 57.040 29.630 0.00 0.00 40.93 2.32
2437 4084 8.911918 AGTAAATGTGTAGTGTACAAATTCCA 57.088 30.769 0.00 0.00 43.88 3.53
2438 4085 9.344772 AGTAAATGTGTAGTGTACAAATTCCAA 57.655 29.630 0.00 0.00 43.88 3.53
2439 4086 9.953697 GTAAATGTGTAGTGTACAAATTCCAAA 57.046 29.630 0.00 0.00 43.88 3.28
2442 4089 9.474920 AATGTGTAGTGTACAAATTCCAAAATG 57.525 29.630 0.00 0.00 41.57 2.32
2443 4090 6.920758 TGTGTAGTGTACAAATTCCAAAATGC 59.079 34.615 0.00 0.00 40.93 3.56
2444 4091 7.145323 GTGTAGTGTACAAATTCCAAAATGCT 58.855 34.615 0.00 0.00 40.93 3.79
2445 4092 8.293867 GTGTAGTGTACAAATTCCAAAATGCTA 58.706 33.333 0.00 0.00 40.93 3.49
2446 4093 8.511321 TGTAGTGTACAAATTCCAAAATGCTAG 58.489 33.333 0.00 0.00 35.38 3.42
2447 4094 6.924111 AGTGTACAAATTCCAAAATGCTAGG 58.076 36.000 0.00 0.00 0.00 3.02
2448 4095 5.576774 GTGTACAAATTCCAAAATGCTAGGC 59.423 40.000 0.00 0.00 0.00 3.93
2449 4096 4.888326 ACAAATTCCAAAATGCTAGGCA 57.112 36.364 0.00 0.00 44.86 4.75
2450 4097 5.226194 ACAAATTCCAAAATGCTAGGCAA 57.774 34.783 0.00 0.00 43.62 4.52
2451 4098 5.240121 ACAAATTCCAAAATGCTAGGCAAG 58.760 37.500 0.00 0.00 43.62 4.01
2459 4106 3.804193 GCTAGGCAAGCCACGTGC 61.804 66.667 10.91 5.91 46.25 5.34
2460 4107 2.358615 CTAGGCAAGCCACGTGCA 60.359 61.111 10.91 0.00 44.07 4.57
2461 4108 1.965930 CTAGGCAAGCCACGTGCAA 60.966 57.895 10.91 0.00 44.07 4.08
2462 4109 2.187599 CTAGGCAAGCCACGTGCAAC 62.188 60.000 10.91 1.26 44.07 4.17
2463 4110 2.674563 TAGGCAAGCCACGTGCAACT 62.675 55.000 10.91 3.93 44.07 3.16
2464 4111 2.258013 GGCAAGCCACGTGCAACTA 61.258 57.895 10.91 0.00 44.07 2.24
2465 4112 1.082104 GCAAGCCACGTGCAACTAC 60.082 57.895 10.91 0.00 44.83 2.73
2466 4113 1.781025 GCAAGCCACGTGCAACTACA 61.781 55.000 10.91 0.00 44.83 2.74
2467 4114 0.041312 CAAGCCACGTGCAACTACAC 60.041 55.000 10.91 0.00 44.83 2.90
2468 4115 1.164041 AAGCCACGTGCAACTACACC 61.164 55.000 10.91 0.00 44.83 4.16
2469 4116 1.597027 GCCACGTGCAACTACACCT 60.597 57.895 10.91 0.00 40.77 4.00
2470 4117 1.566018 GCCACGTGCAACTACACCTC 61.566 60.000 10.91 0.00 40.77 3.85
2471 4118 0.949105 CCACGTGCAACTACACCTCC 60.949 60.000 10.91 0.00 37.25 4.30
2472 4119 1.006571 ACGTGCAACTACACCTCCG 60.007 57.895 0.00 0.00 37.25 4.63
2473 4120 2.380410 CGTGCAACTACACCTCCGC 61.380 63.158 0.00 0.00 37.25 5.54
2474 4121 2.033194 GTGCAACTACACCTCCGCC 61.033 63.158 0.00 0.00 34.35 6.13
2475 4122 2.813908 GCAACTACACCTCCGCCG 60.814 66.667 0.00 0.00 0.00 6.46
2476 4123 2.813908 CAACTACACCTCCGCCGC 60.814 66.667 0.00 0.00 0.00 6.53
2477 4124 2.995574 AACTACACCTCCGCCGCT 60.996 61.111 0.00 0.00 0.00 5.52
2478 4125 3.003113 AACTACACCTCCGCCGCTC 62.003 63.158 0.00 0.00 0.00 5.03
2479 4126 4.554363 CTACACCTCCGCCGCTCG 62.554 72.222 0.00 0.00 38.08 5.03
2489 4136 2.406401 GCCGCTCGCGAGTAACTA 59.594 61.111 34.46 0.00 42.83 2.24
2490 4137 1.938329 GCCGCTCGCGAGTAACTAC 60.938 63.158 34.46 17.33 42.83 2.73
2491 4138 1.426621 CCGCTCGCGAGTAACTACA 59.573 57.895 34.46 0.00 42.83 2.74
2492 4139 0.589229 CCGCTCGCGAGTAACTACAG 60.589 60.000 34.46 16.16 42.83 2.74
2493 4140 0.096628 CGCTCGCGAGTAACTACAGT 59.903 55.000 34.46 0.00 42.83 3.55
2494 4141 1.465354 CGCTCGCGAGTAACTACAGTT 60.465 52.381 34.46 0.00 42.83 3.16
2495 4142 1.912110 GCTCGCGAGTAACTACAGTTG 59.088 52.381 34.46 8.36 38.90 3.16
2496 4143 1.912110 CTCGCGAGTAACTACAGTTGC 59.088 52.381 27.79 3.57 40.28 4.17
2497 4144 1.267533 TCGCGAGTAACTACAGTTGCA 59.732 47.619 3.71 0.00 42.02 4.08
2498 4145 1.385743 CGCGAGTAACTACAGTTGCAC 59.614 52.381 0.00 5.49 42.02 4.57
2499 4146 1.725164 GCGAGTAACTACAGTTGCACC 59.275 52.381 11.91 3.63 42.02 5.01
2500 4147 2.864882 GCGAGTAACTACAGTTGCACCA 60.865 50.000 11.91 0.00 42.02 4.17
2501 4148 2.729882 CGAGTAACTACAGTTGCACCAC 59.270 50.000 11.91 0.00 42.02 4.16
2502 4149 3.064931 GAGTAACTACAGTTGCACCACC 58.935 50.000 11.91 0.00 42.02 4.61
2503 4150 2.436542 AGTAACTACAGTTGCACCACCA 59.563 45.455 11.91 0.00 42.02 4.17
2504 4151 1.675552 AACTACAGTTGCACCACCAC 58.324 50.000 0.00 0.00 36.80 4.16
2505 4152 0.837272 ACTACAGTTGCACCACCACT 59.163 50.000 0.00 0.00 0.00 4.00
2506 4153 2.043992 ACTACAGTTGCACCACCACTA 58.956 47.619 0.00 0.00 0.00 2.74
2507 4154 2.037251 ACTACAGTTGCACCACCACTAG 59.963 50.000 0.00 0.00 0.00 2.57
2508 4155 0.837272 ACAGTTGCACCACCACTAGT 59.163 50.000 0.00 0.00 0.00 2.57
2509 4156 1.202651 ACAGTTGCACCACCACTAGTC 60.203 52.381 0.00 0.00 0.00 2.59
2510 4157 1.070758 CAGTTGCACCACCACTAGTCT 59.929 52.381 0.00 0.00 0.00 3.24
2511 4158 2.299013 CAGTTGCACCACCACTAGTCTA 59.701 50.000 0.00 0.00 0.00 2.59
2512 4159 2.563179 AGTTGCACCACCACTAGTCTAG 59.437 50.000 5.27 5.27 0.00 2.43
2513 4160 0.895530 TGCACCACCACTAGTCTAGC 59.104 55.000 6.81 0.00 0.00 3.42
2514 4161 0.179134 GCACCACCACTAGTCTAGCG 60.179 60.000 6.81 0.00 0.00 4.26
2515 4162 0.179134 CACCACCACTAGTCTAGCGC 60.179 60.000 6.81 0.00 0.00 5.92
2516 4163 0.611062 ACCACCACTAGTCTAGCGCA 60.611 55.000 11.47 0.00 0.00 6.09
2517 4164 0.530744 CCACCACTAGTCTAGCGCAA 59.469 55.000 11.47 0.00 0.00 4.85
2518 4165 1.630148 CACCACTAGTCTAGCGCAAC 58.370 55.000 11.47 4.62 0.00 4.17
2519 4166 1.202582 CACCACTAGTCTAGCGCAACT 59.797 52.381 11.47 12.76 0.00 3.16
2520 4167 1.202582 ACCACTAGTCTAGCGCAACTG 59.797 52.381 11.47 7.66 0.00 3.16
2521 4168 1.272781 CACTAGTCTAGCGCAACTGC 58.727 55.000 11.47 0.00 37.78 4.40
2522 4169 0.888619 ACTAGTCTAGCGCAACTGCA 59.111 50.000 11.47 0.00 42.21 4.41
2523 4170 1.135257 ACTAGTCTAGCGCAACTGCAG 60.135 52.381 13.48 13.48 42.21 4.41
2524 4171 0.173481 TAGTCTAGCGCAACTGCAGG 59.827 55.000 19.93 1.57 42.21 4.85
2525 4172 2.434884 TCTAGCGCAACTGCAGGC 60.435 61.111 19.93 11.86 42.21 4.85
2526 4173 2.435586 CTAGCGCAACTGCAGGCT 60.436 61.111 19.93 18.54 42.21 4.58
2527 4174 2.434884 TAGCGCAACTGCAGGCTC 60.435 61.111 19.93 7.77 42.21 4.70
2531 4178 4.099170 GCAACTGCAGGCTCGCTG 62.099 66.667 19.93 6.27 41.59 5.18
2532 4179 2.667536 CAACTGCAGGCTCGCTGT 60.668 61.111 19.93 12.93 44.80 4.40
2533 4180 2.358003 AACTGCAGGCTCGCTGTC 60.358 61.111 19.93 0.00 42.45 3.51
2534 4181 3.890936 AACTGCAGGCTCGCTGTCC 62.891 63.158 19.93 0.00 42.45 4.02
2545 4192 2.736995 GCTGTCCGCGCACAACTA 60.737 61.111 3.62 0.00 0.00 2.24
2546 4193 2.100631 GCTGTCCGCGCACAACTAT 61.101 57.895 3.62 0.00 0.00 2.12
2547 4194 0.804544 GCTGTCCGCGCACAACTATA 60.805 55.000 3.62 0.00 0.00 1.31
2548 4195 1.200483 CTGTCCGCGCACAACTATAG 58.800 55.000 3.62 0.00 0.00 1.31
2549 4196 0.804544 TGTCCGCGCACAACTATAGC 60.805 55.000 0.00 0.00 0.00 2.97
2553 4200 3.319904 CGCACAACTATAGCGCCC 58.680 61.111 2.29 0.00 45.14 6.13
2554 4201 1.520564 CGCACAACTATAGCGCCCA 60.521 57.895 2.29 0.00 45.14 5.36
2555 4202 0.880278 CGCACAACTATAGCGCCCAT 60.880 55.000 2.29 0.00 45.14 4.00
2556 4203 0.868406 GCACAACTATAGCGCCCATC 59.132 55.000 2.29 0.00 0.00 3.51
2557 4204 1.139989 CACAACTATAGCGCCCATCG 58.860 55.000 2.29 0.00 42.12 3.84
2558 4205 1.037493 ACAACTATAGCGCCCATCGA 58.963 50.000 2.29 0.00 41.67 3.59
2559 4206 1.269621 ACAACTATAGCGCCCATCGAC 60.270 52.381 2.29 0.00 41.67 4.20
2560 4207 1.000163 CAACTATAGCGCCCATCGACT 60.000 52.381 2.29 0.00 41.67 4.18
2561 4208 0.598562 ACTATAGCGCCCATCGACTG 59.401 55.000 2.29 0.00 41.67 3.51
2562 4209 0.734253 CTATAGCGCCCATCGACTGC 60.734 60.000 2.29 0.00 41.67 4.40
2563 4210 1.179174 TATAGCGCCCATCGACTGCT 61.179 55.000 2.29 0.00 41.67 4.24
2564 4211 2.032860 ATAGCGCCCATCGACTGCTT 62.033 55.000 2.29 0.00 41.67 3.91
2565 4212 2.906182 TAGCGCCCATCGACTGCTTG 62.906 60.000 2.29 0.00 41.67 4.01
2566 4213 3.869272 CGCCCATCGACTGCTTGC 61.869 66.667 0.00 0.00 41.67 4.01
2567 4214 3.512516 GCCCATCGACTGCTTGCC 61.513 66.667 0.00 0.00 0.00 4.52
2568 4215 2.046023 CCCATCGACTGCTTGCCA 60.046 61.111 0.00 0.00 0.00 4.92
2569 4216 1.675310 CCCATCGACTGCTTGCCAA 60.675 57.895 0.00 0.00 0.00 4.52
2570 4217 1.033746 CCCATCGACTGCTTGCCAAT 61.034 55.000 0.00 0.00 0.00 3.16
2571 4218 1.667236 CCATCGACTGCTTGCCAATA 58.333 50.000 0.00 0.00 0.00 1.90
2572 4219 1.331756 CCATCGACTGCTTGCCAATAC 59.668 52.381 0.00 0.00 0.00 1.89
2573 4220 2.283298 CATCGACTGCTTGCCAATACT 58.717 47.619 0.00 0.00 0.00 2.12
2574 4221 1.725641 TCGACTGCTTGCCAATACTG 58.274 50.000 0.00 0.00 0.00 2.74
2575 4222 1.001974 TCGACTGCTTGCCAATACTGT 59.998 47.619 0.00 0.00 0.00 3.55
2576 4223 1.806542 CGACTGCTTGCCAATACTGTT 59.193 47.619 0.00 0.00 0.00 3.16
2577 4224 3.000041 CGACTGCTTGCCAATACTGTTA 59.000 45.455 0.00 0.00 0.00 2.41
2578 4225 3.435327 CGACTGCTTGCCAATACTGTTAA 59.565 43.478 0.00 0.00 0.00 2.01
2579 4226 4.083537 CGACTGCTTGCCAATACTGTTAAA 60.084 41.667 0.00 0.00 0.00 1.52
2580 4227 5.121221 ACTGCTTGCCAATACTGTTAAAC 57.879 39.130 0.00 0.00 0.00 2.01
2581 4228 4.153958 TGCTTGCCAATACTGTTAAACG 57.846 40.909 0.00 0.00 0.00 3.60
2582 4229 3.566322 TGCTTGCCAATACTGTTAAACGT 59.434 39.130 0.00 0.00 0.00 3.99
2583 4230 4.156182 GCTTGCCAATACTGTTAAACGTC 58.844 43.478 0.00 0.00 0.00 4.34
2584 4231 4.719040 CTTGCCAATACTGTTAAACGTCC 58.281 43.478 0.00 0.00 0.00 4.79
2585 4232 3.741249 TGCCAATACTGTTAAACGTCCA 58.259 40.909 0.00 0.00 0.00 4.02
2586 4233 3.499157 TGCCAATACTGTTAAACGTCCAC 59.501 43.478 0.00 0.00 0.00 4.02
2587 4234 3.120095 GCCAATACTGTTAAACGTCCACC 60.120 47.826 0.00 0.00 0.00 4.61
2588 4235 3.123959 CCAATACTGTTAAACGTCCACCG 59.876 47.826 0.00 0.00 44.03 4.94
2589 4236 1.782044 TACTGTTAAACGTCCACCGC 58.218 50.000 0.00 0.00 41.42 5.68
2590 4237 0.105408 ACTGTTAAACGTCCACCGCT 59.895 50.000 0.00 0.00 41.42 5.52
2591 4238 1.223187 CTGTTAAACGTCCACCGCTT 58.777 50.000 0.00 0.00 41.42 4.68
2592 4239 2.224018 ACTGTTAAACGTCCACCGCTTA 60.224 45.455 0.00 0.00 41.42 3.09
2593 4240 2.134346 TGTTAAACGTCCACCGCTTAC 58.866 47.619 0.00 0.00 41.42 2.34
2594 4241 1.124839 GTTAAACGTCCACCGCTTACG 59.875 52.381 0.00 0.00 41.42 3.18
2595 4242 1.008361 TAAACGTCCACCGCTTACGC 61.008 55.000 0.00 0.00 40.18 4.42
2596 4243 4.729856 ACGTCCACCGCTTACGCC 62.730 66.667 0.00 0.00 40.18 5.68
2598 4245 4.424566 GTCCACCGCTTACGCCGA 62.425 66.667 0.00 0.00 38.22 5.54
2599 4246 3.682885 TCCACCGCTTACGCCGAA 61.683 61.111 0.00 0.00 38.22 4.30
2600 4247 3.484547 CCACCGCTTACGCCGAAC 61.485 66.667 0.00 0.00 38.22 3.95
2601 4248 2.431942 CACCGCTTACGCCGAACT 60.432 61.111 0.00 0.00 38.22 3.01
2602 4249 1.153978 CACCGCTTACGCCGAACTA 60.154 57.895 0.00 0.00 38.22 2.24
2603 4250 0.526954 CACCGCTTACGCCGAACTAT 60.527 55.000 0.00 0.00 38.22 2.12
2604 4251 1.024271 ACCGCTTACGCCGAACTATA 58.976 50.000 0.00 0.00 38.22 1.31
2605 4252 1.405105 ACCGCTTACGCCGAACTATAA 59.595 47.619 0.00 0.00 38.22 0.98
2606 4253 2.035066 ACCGCTTACGCCGAACTATAAT 59.965 45.455 0.00 0.00 38.22 1.28
2607 4254 3.253188 ACCGCTTACGCCGAACTATAATA 59.747 43.478 0.00 0.00 38.22 0.98
2608 4255 3.850273 CCGCTTACGCCGAACTATAATAG 59.150 47.826 0.00 0.00 38.22 1.73
2609 4256 3.300066 CGCTTACGCCGAACTATAATAGC 59.700 47.826 0.00 0.00 0.00 2.97
2610 4257 4.232221 GCTTACGCCGAACTATAATAGCA 58.768 43.478 0.00 0.00 0.00 3.49
2611 4258 4.089636 GCTTACGCCGAACTATAATAGCAC 59.910 45.833 0.00 0.00 0.00 4.40
2612 4259 3.720949 ACGCCGAACTATAATAGCACA 57.279 42.857 0.00 0.00 0.00 4.57
2613 4260 4.252971 ACGCCGAACTATAATAGCACAT 57.747 40.909 0.00 0.00 0.00 3.21
2614 4261 4.235360 ACGCCGAACTATAATAGCACATC 58.765 43.478 0.00 0.00 0.00 3.06
2615 4262 3.300853 CGCCGAACTATAATAGCACATCG 59.699 47.826 0.00 0.00 0.00 3.84
2616 4263 3.060895 GCCGAACTATAATAGCACATCGC 59.939 47.826 0.00 0.00 42.91 4.58
2625 4272 3.195698 GCACATCGCTTCCGGGTC 61.196 66.667 0.00 0.00 37.77 4.46
2626 4273 2.885644 CACATCGCTTCCGGGTCG 60.886 66.667 0.00 2.76 34.56 4.79
2627 4274 3.379445 ACATCGCTTCCGGGTCGT 61.379 61.111 0.00 0.00 34.56 4.34
2628 4275 2.885644 CATCGCTTCCGGGTCGTG 60.886 66.667 0.00 0.00 34.56 4.35
2629 4276 4.814294 ATCGCTTCCGGGTCGTGC 62.814 66.667 0.00 0.00 34.56 5.34
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
381 399 3.377172 GGAATGGAATACGTGGGTTTCTG 59.623 47.826 0.00 0.00 0.00 3.02
562 589 7.750229 TCCATAAATAGGTTGATGCTCATTC 57.250 36.000 0.00 0.00 0.00 2.67
712 740 8.843733 CGAAATGAATATTTTCCATTCTATGCG 58.156 33.333 2.36 0.00 36.66 4.73
787 815 8.031864 ACACTCACTTCAGATATCTTGTTACTG 58.968 37.037 1.33 0.00 0.00 2.74
802 830 2.766263 AGACCTGTTGACACTCACTTCA 59.234 45.455 0.00 0.00 0.00 3.02
826 854 2.870435 GCAGTATCCAGTTCGGTTGTGT 60.870 50.000 0.00 0.00 35.57 3.72
890 918 1.003696 TGTGCGGTTTGATGGATACCA 59.996 47.619 0.00 0.00 38.19 3.25
893 921 1.680555 GGGTGTGCGGTTTGATGGATA 60.681 52.381 0.00 0.00 0.00 2.59
911 939 2.358898 CGATGCCTAAGGTTGAAATGGG 59.641 50.000 0.00 0.00 0.00 4.00
920 948 1.553248 TGTGTAAGCGATGCCTAAGGT 59.447 47.619 0.00 0.00 0.00 3.50
934 962 5.542635 AGGAGTGTTGAGGATAAGTGTGTAA 59.457 40.000 0.00 0.00 0.00 2.41
973 1001 1.002502 GGCCGGCTAGAAACCTTGT 60.003 57.895 28.56 0.00 0.00 3.16
1033 1061 0.534427 AGCACGATGATGATGGCAGG 60.534 55.000 0.00 0.00 0.00 4.85
1085 1113 0.542467 TGGCTTGCCACCAACATCAT 60.542 50.000 10.65 0.00 33.12 2.45
1104 1132 0.605319 TCACGAAATCGGCTGCCTTT 60.605 50.000 17.92 11.37 44.95 3.11
1131 1159 1.227999 TGGCTGTAGCGTTCTTGCAC 61.228 55.000 0.00 0.00 43.26 4.57
1219 1247 0.250513 CGAAGGTCCTTAGCCTTGCT 59.749 55.000 3.42 0.00 45.51 3.91
1290 1318 6.389906 CAACATTTCTTGGACCTTACCATTC 58.610 40.000 0.00 0.00 39.82 2.67
1439 3081 1.378514 GGCCCATCGTTGTCACCAT 60.379 57.895 0.00 0.00 0.00 3.55
1458 3100 4.591321 TTGAGGGAGCATAAAAGATGGT 57.409 40.909 0.00 0.00 0.00 3.55
1486 3128 0.604780 CTGAGGGTGTTCACCTGCTG 60.605 60.000 19.42 12.26 38.79 4.41
1530 3172 2.079925 GCTTGAAGCTCCGACAAATCT 58.920 47.619 10.44 0.00 38.45 2.40
1537 3179 0.531974 AACAACGCTTGAAGCTCCGA 60.532 50.000 15.92 0.00 39.60 4.55
1567 3209 2.579873 GGCCAGCATACTCATGTCAAT 58.420 47.619 0.00 0.00 34.40 2.57
1646 3288 1.453155 CAACATACACCACTCAGGCC 58.547 55.000 0.00 0.00 43.14 5.19
1722 3367 8.626526 TGGTTCAAAAACTAGTGGAGAAATAAC 58.373 33.333 0.00 0.00 35.61 1.89
1723 3368 8.626526 GTGGTTCAAAAACTAGTGGAGAAATAA 58.373 33.333 0.00 0.00 35.61 1.40
1735 3380 7.446931 TGCATAGATTCAGTGGTTCAAAAACTA 59.553 33.333 0.00 0.00 35.61 2.24
1741 3386 3.691118 GCTGCATAGATTCAGTGGTTCAA 59.309 43.478 0.00 0.00 33.09 2.69
1791 3436 3.691049 CTCGCACAGAGGAAAACAAAA 57.309 42.857 0.00 0.00 43.20 2.44
1809 3454 3.704061 TGGCATAAAGGGGCATAAAACTC 59.296 43.478 0.00 0.00 35.74 3.01
1871 3516 1.504647 CGTGGGCTATGAGCATGCAG 61.505 60.000 21.98 9.55 44.75 4.41
1922 3567 0.726827 CCATAAAGATGCACACGCGT 59.273 50.000 5.58 5.58 42.97 6.01
1926 3571 1.202336 GCTGGCCATAAAGATGCACAC 60.202 52.381 5.51 0.00 0.00 3.82
1927 3572 1.105457 GCTGGCCATAAAGATGCACA 58.895 50.000 5.51 0.00 0.00 4.57
1928 3573 1.105457 TGCTGGCCATAAAGATGCAC 58.895 50.000 5.51 0.00 0.00 4.57
1936 3581 2.285083 GTAATCGTGTGCTGGCCATAA 58.715 47.619 5.51 0.00 0.00 1.90
1960 3605 6.665248 AGGATAAAAAGGGAAAAGGAGACATG 59.335 38.462 0.00 0.00 0.00 3.21
1966 3611 8.096621 ACAAAAAGGATAAAAAGGGAAAAGGA 57.903 30.769 0.00 0.00 0.00 3.36
1974 3619 7.273381 CGTGCATCTACAAAAAGGATAAAAAGG 59.727 37.037 0.00 0.00 0.00 3.11
1997 3642 9.988350 AAGAGCACATAAGAAATATAAAACGTG 57.012 29.630 0.00 0.00 0.00 4.49
2035 3680 2.926165 ACTACAGTAACGCGTCAGAAC 58.074 47.619 14.44 9.10 0.00 3.01
2043 3688 1.056750 CGCGCAACTACAGTAACGC 59.943 57.895 8.75 15.21 44.08 4.84
2051 3697 0.643820 GGATACACACGCGCAACTAC 59.356 55.000 5.73 0.00 0.00 2.73
2081 3728 5.411361 TGCGCAAATAAGTATCTTCACAACT 59.589 36.000 8.16 0.00 0.00 3.16
2093 3740 5.880054 AGAATAGTTGTGCGCAAATAAGT 57.120 34.783 22.22 14.00 38.42 2.24
2094 3741 7.114811 ACAAAAGAATAGTTGTGCGCAAATAAG 59.885 33.333 22.22 9.93 38.42 1.73
2097 3744 5.288804 ACAAAAGAATAGTTGTGCGCAAAT 58.711 33.333 14.00 17.74 36.62 2.32
2099 3746 4.286910 GACAAAAGAATAGTTGTGCGCAA 58.713 39.130 14.00 9.01 38.07 4.85
2104 3751 7.402811 TGTAGACGACAAAAGAATAGTTGTG 57.597 36.000 0.00 0.00 38.07 3.33
2117 3764 7.989129 CACTGGACGTGATTGTAGACGACAA 62.989 48.000 3.49 3.49 46.81 3.18
2118 3765 1.881324 TGGACGTGATTGTAGACGACA 59.119 47.619 0.00 0.00 38.94 4.35
2119 3766 2.095364 ACTGGACGTGATTGTAGACGAC 60.095 50.000 0.00 0.00 38.94 4.34
2120 3767 2.095415 CACTGGACGTGATTGTAGACGA 60.095 50.000 0.00 0.00 46.81 4.20
2121 3768 2.251040 CACTGGACGTGATTGTAGACG 58.749 52.381 0.00 0.00 46.81 4.18
2122 3769 2.607187 CCACTGGACGTGATTGTAGAC 58.393 52.381 0.00 0.00 46.81 2.59
2123 3770 1.067142 GCCACTGGACGTGATTGTAGA 60.067 52.381 0.00 0.00 46.81 2.59
2124 3771 1.359848 GCCACTGGACGTGATTGTAG 58.640 55.000 0.00 0.00 46.81 2.74
2125 3772 0.036765 GGCCACTGGACGTGATTGTA 60.037 55.000 0.00 0.00 46.81 2.41
2126 3773 1.302511 GGCCACTGGACGTGATTGT 60.303 57.895 0.00 0.00 46.81 2.71
2127 3774 1.003355 AGGCCACTGGACGTGATTG 60.003 57.895 5.01 0.00 46.81 2.67
2128 3775 1.003355 CAGGCCACTGGACGTGATT 60.003 57.895 5.01 0.00 46.81 2.57
2129 3776 2.665000 CAGGCCACTGGACGTGAT 59.335 61.111 5.01 0.00 46.81 3.06
2130 3777 4.314440 GCAGGCCACTGGACGTGA 62.314 66.667 5.01 0.00 46.81 4.35
2140 3787 1.228124 GTACAGTTGTGGCAGGCCA 60.228 57.895 9.35 9.35 45.02 5.36
2141 3788 0.609131 ATGTACAGTTGTGGCAGGCC 60.609 55.000 2.62 2.62 0.00 5.19
2142 3789 1.247567 AATGTACAGTTGTGGCAGGC 58.752 50.000 0.33 0.00 0.00 4.85
2143 3790 3.149196 AGAAATGTACAGTTGTGGCAGG 58.851 45.455 14.13 0.00 0.00 4.85
2144 3791 5.120830 GTCTAGAAATGTACAGTTGTGGCAG 59.879 44.000 14.13 4.31 0.00 4.85
2145 3792 4.994852 GTCTAGAAATGTACAGTTGTGGCA 59.005 41.667 14.13 0.00 0.00 4.92
2146 3793 4.091509 CGTCTAGAAATGTACAGTTGTGGC 59.908 45.833 14.13 7.03 0.00 5.01
2147 3794 4.091509 GCGTCTAGAAATGTACAGTTGTGG 59.908 45.833 14.13 11.69 0.00 4.17
2148 3795 4.684242 TGCGTCTAGAAATGTACAGTTGTG 59.316 41.667 14.13 4.99 0.00 3.33
2149 3796 4.878439 TGCGTCTAGAAATGTACAGTTGT 58.122 39.130 14.13 12.23 0.00 3.32
2150 3797 5.405571 AGTTGCGTCTAGAAATGTACAGTTG 59.594 40.000 14.13 0.00 0.00 3.16
2151 3798 5.405571 CAGTTGCGTCTAGAAATGTACAGTT 59.594 40.000 8.54 8.54 0.00 3.16
2152 3799 4.923871 CAGTTGCGTCTAGAAATGTACAGT 59.076 41.667 0.33 0.00 0.00 3.55
2153 3800 4.201628 GCAGTTGCGTCTAGAAATGTACAG 60.202 45.833 0.33 0.00 0.00 2.74
2154 3801 3.678072 GCAGTTGCGTCTAGAAATGTACA 59.322 43.478 0.00 0.00 0.00 2.90
2155 3802 3.678072 TGCAGTTGCGTCTAGAAATGTAC 59.322 43.478 0.00 0.00 45.83 2.90
2156 3803 3.678072 GTGCAGTTGCGTCTAGAAATGTA 59.322 43.478 0.00 0.00 45.83 2.29
2157 3804 2.480419 GTGCAGTTGCGTCTAGAAATGT 59.520 45.455 0.00 0.00 45.83 2.71
2158 3805 2.472886 CGTGCAGTTGCGTCTAGAAATG 60.473 50.000 0.00 0.00 45.83 2.32
2159 3806 1.726791 CGTGCAGTTGCGTCTAGAAAT 59.273 47.619 0.00 0.00 45.83 2.17
2160 3807 1.136690 CGTGCAGTTGCGTCTAGAAA 58.863 50.000 0.00 0.00 45.83 2.52
2161 3808 0.031585 ACGTGCAGTTGCGTCTAGAA 59.968 50.000 0.00 0.00 45.83 2.10
2162 3809 1.658114 ACGTGCAGTTGCGTCTAGA 59.342 52.632 0.00 0.00 45.83 2.43
2163 3810 4.245054 ACGTGCAGTTGCGTCTAG 57.755 55.556 0.00 0.00 45.83 2.43
2167 3814 1.366111 AAACAGACGTGCAGTTGCGT 61.366 50.000 0.00 0.00 45.83 5.24
2168 3815 0.925267 CAAACAGACGTGCAGTTGCG 60.925 55.000 0.00 0.00 45.83 4.85
2169 3816 0.098728 ACAAACAGACGTGCAGTTGC 59.901 50.000 0.00 0.00 42.50 4.17
2170 3817 2.176369 CAACAAACAGACGTGCAGTTG 58.824 47.619 0.00 0.00 0.00 3.16
2171 3818 1.810151 ACAACAAACAGACGTGCAGTT 59.190 42.857 0.00 0.00 0.00 3.16
2172 3819 1.130373 CACAACAAACAGACGTGCAGT 59.870 47.619 0.00 0.00 0.00 4.40
2173 3820 1.813896 CACAACAAACAGACGTGCAG 58.186 50.000 0.00 0.00 0.00 4.41
2174 3821 3.986374 CACAACAAACAGACGTGCA 57.014 47.368 0.00 0.00 0.00 4.57
2175 3822 2.565868 GCACAACAAACAGACGTGC 58.434 52.632 0.00 0.00 45.25 5.34
2176 3823 2.110990 CATGCACAACAAACAGACGTG 58.889 47.619 0.00 0.00 0.00 4.49
2177 3824 1.533756 GCATGCACAACAAACAGACGT 60.534 47.619 14.21 0.00 0.00 4.34
2178 3825 1.122849 GCATGCACAACAAACAGACG 58.877 50.000 14.21 0.00 0.00 4.18
2179 3826 1.122849 CGCATGCACAACAAACAGAC 58.877 50.000 19.57 0.00 0.00 3.51
2180 3827 0.594540 GCGCATGCACAACAAACAGA 60.595 50.000 19.57 0.00 42.15 3.41
2181 3828 1.550659 GGCGCATGCACAACAAACAG 61.551 55.000 19.57 0.00 45.35 3.16
2182 3829 1.591059 GGCGCATGCACAACAAACA 60.591 52.632 19.57 0.00 45.35 2.83
2183 3830 1.550659 CTGGCGCATGCACAACAAAC 61.551 55.000 19.57 0.00 45.35 2.93
2184 3831 1.300003 CTGGCGCATGCACAACAAA 60.300 52.632 19.57 0.00 45.35 2.83
2185 3832 2.335729 CTGGCGCATGCACAACAA 59.664 55.556 19.57 0.00 45.35 2.83
2186 3833 3.672447 CCTGGCGCATGCACAACA 61.672 61.111 19.57 9.29 45.35 3.33
2187 3834 3.364441 TCCTGGCGCATGCACAAC 61.364 61.111 19.57 4.73 45.35 3.32
2188 3835 3.364441 GTCCTGGCGCATGCACAA 61.364 61.111 19.57 0.00 45.35 3.33
2192 3839 4.830765 TACCGTCCTGGCGCATGC 62.831 66.667 10.83 7.91 43.94 4.06
2193 3840 2.572095 TTCTACCGTCCTGGCGCATG 62.572 60.000 10.83 0.00 43.94 4.06
2194 3841 1.686325 ATTCTACCGTCCTGGCGCAT 61.686 55.000 10.83 0.00 43.94 4.73
2195 3842 1.038681 TATTCTACCGTCCTGGCGCA 61.039 55.000 10.83 0.00 43.94 6.09
2196 3843 0.318784 CTATTCTACCGTCCTGGCGC 60.319 60.000 0.00 0.00 43.94 6.53
2197 3844 1.315690 TCTATTCTACCGTCCTGGCG 58.684 55.000 3.95 3.95 43.94 5.69
2198 3845 2.694109 ACTTCTATTCTACCGTCCTGGC 59.306 50.000 0.00 0.00 43.94 4.85
2199 3846 5.131784 AGTACTTCTATTCTACCGTCCTGG 58.868 45.833 0.00 0.00 46.41 4.45
2200 3847 5.239087 GGAGTACTTCTATTCTACCGTCCTG 59.761 48.000 0.00 0.00 0.00 3.86
2201 3848 5.375773 GGAGTACTTCTATTCTACCGTCCT 58.624 45.833 0.00 0.00 0.00 3.85
2202 3849 4.518590 GGGAGTACTTCTATTCTACCGTCC 59.481 50.000 0.01 0.00 0.00 4.79
2203 3850 5.375773 AGGGAGTACTTCTATTCTACCGTC 58.624 45.833 0.01 0.00 36.15 4.79
2204 3851 5.385628 AGGGAGTACTTCTATTCTACCGT 57.614 43.478 0.01 0.00 36.15 4.83
2205 3852 5.826737 TGAAGGGAGTACTTCTATTCTACCG 59.173 44.000 16.02 0.00 45.49 4.02
2206 3853 7.842887 ATGAAGGGAGTACTTCTATTCTACC 57.157 40.000 16.02 3.02 45.49 3.18
2207 3854 8.361889 GGAATGAAGGGAGTACTTCTATTCTAC 58.638 40.741 16.02 9.77 45.49 2.59
2208 3855 8.290277 AGGAATGAAGGGAGTACTTCTATTCTA 58.710 37.037 16.02 7.32 45.49 2.10
2209 3856 7.136203 AGGAATGAAGGGAGTACTTCTATTCT 58.864 38.462 16.02 0.00 45.49 2.40
2210 3857 7.368198 AGGAATGAAGGGAGTACTTCTATTC 57.632 40.000 0.01 6.88 45.49 1.75
2211 3858 8.855804 TTAGGAATGAAGGGAGTACTTCTATT 57.144 34.615 0.01 0.00 45.49 1.73
2212 3859 8.855804 TTTAGGAATGAAGGGAGTACTTCTAT 57.144 34.615 0.01 0.00 45.49 1.98
2213 3860 8.855804 ATTTAGGAATGAAGGGAGTACTTCTA 57.144 34.615 0.01 0.00 45.49 2.10
2214 3861 7.757242 ATTTAGGAATGAAGGGAGTACTTCT 57.243 36.000 0.01 0.00 45.49 2.85
2220 3867 9.453830 AGACTTATATTTAGGAATGAAGGGAGT 57.546 33.333 0.00 0.00 30.05 3.85
2239 3886 9.829507 CATAGTGAAATCTCTCCAAAGACTTAT 57.170 33.333 0.00 0.00 0.00 1.73
2240 3887 8.260818 CCATAGTGAAATCTCTCCAAAGACTTA 58.739 37.037 0.00 0.00 0.00 2.24
2241 3888 7.038017 TCCATAGTGAAATCTCTCCAAAGACTT 60.038 37.037 0.00 0.00 0.00 3.01
2242 3889 6.441924 TCCATAGTGAAATCTCTCCAAAGACT 59.558 38.462 0.00 0.00 0.00 3.24
2243 3890 6.536941 GTCCATAGTGAAATCTCTCCAAAGAC 59.463 42.308 0.00 0.00 0.00 3.01
2244 3891 6.441924 AGTCCATAGTGAAATCTCTCCAAAGA 59.558 38.462 0.00 0.00 0.00 2.52
2245 3892 6.648192 AGTCCATAGTGAAATCTCTCCAAAG 58.352 40.000 0.00 0.00 0.00 2.77
2246 3893 6.627087 AGTCCATAGTGAAATCTCTCCAAA 57.373 37.500 0.00 0.00 0.00 3.28
2247 3894 7.921041 ATAGTCCATAGTGAAATCTCTCCAA 57.079 36.000 0.00 0.00 0.00 3.53
2251 3898 9.961264 TCGTATATAGTCCATAGTGAAATCTCT 57.039 33.333 0.00 0.00 0.00 3.10
2254 3901 9.291664 GCTTCGTATATAGTCCATAGTGAAATC 57.708 37.037 0.00 0.00 0.00 2.17
2255 3902 8.803235 TGCTTCGTATATAGTCCATAGTGAAAT 58.197 33.333 0.00 0.00 0.00 2.17
2256 3903 8.173542 TGCTTCGTATATAGTCCATAGTGAAA 57.826 34.615 0.00 0.00 0.00 2.69
2257 3904 7.754851 TGCTTCGTATATAGTCCATAGTGAA 57.245 36.000 0.00 0.00 0.00 3.18
2258 3905 7.754851 TTGCTTCGTATATAGTCCATAGTGA 57.245 36.000 0.00 0.00 0.00 3.41
2259 3906 8.812147 TTTTGCTTCGTATATAGTCCATAGTG 57.188 34.615 0.00 0.00 0.00 2.74
2260 3907 9.424319 CATTTTGCTTCGTATATAGTCCATAGT 57.576 33.333 0.00 0.00 0.00 2.12
2261 3908 9.639601 TCATTTTGCTTCGTATATAGTCCATAG 57.360 33.333 0.00 0.00 0.00 2.23
2262 3909 9.639601 CTCATTTTGCTTCGTATATAGTCCATA 57.360 33.333 0.00 0.00 0.00 2.74
2263 3910 8.150945 ACTCATTTTGCTTCGTATATAGTCCAT 58.849 33.333 0.00 0.00 0.00 3.41
2264 3911 7.438160 CACTCATTTTGCTTCGTATATAGTCCA 59.562 37.037 0.00 0.00 0.00 4.02
2265 3912 7.652105 TCACTCATTTTGCTTCGTATATAGTCC 59.348 37.037 0.00 0.00 0.00 3.85
2266 3913 8.575565 TCACTCATTTTGCTTCGTATATAGTC 57.424 34.615 0.00 0.00 0.00 2.59
2267 3914 8.942338 TTCACTCATTTTGCTTCGTATATAGT 57.058 30.769 0.00 0.00 0.00 2.12
2269 3916 9.764363 AGATTCACTCATTTTGCTTCGTATATA 57.236 29.630 0.00 0.00 0.00 0.86
2270 3917 8.668510 AGATTCACTCATTTTGCTTCGTATAT 57.331 30.769 0.00 0.00 0.00 0.86
2271 3918 9.764363 ATAGATTCACTCATTTTGCTTCGTATA 57.236 29.630 0.00 0.00 0.00 1.47
2272 3919 6.992063 AGATTCACTCATTTTGCTTCGTAT 57.008 33.333 0.00 0.00 0.00 3.06
2273 3920 9.031360 GTATAGATTCACTCATTTTGCTTCGTA 57.969 33.333 0.00 0.00 0.00 3.43
2274 3921 6.992063 ATAGATTCACTCATTTTGCTTCGT 57.008 33.333 0.00 0.00 0.00 3.85
2275 3922 8.136057 AGTATAGATTCACTCATTTTGCTTCG 57.864 34.615 0.00 0.00 0.00 3.79
2276 3923 9.323985 AGAGTATAGATTCACTCATTTTGCTTC 57.676 33.333 4.70 0.00 42.99 3.86
2278 3925 9.757227 GTAGAGTATAGATTCACTCATTTTGCT 57.243 33.333 4.70 0.00 42.99 3.91
2279 3926 9.534565 TGTAGAGTATAGATTCACTCATTTTGC 57.465 33.333 4.70 0.00 42.99 3.68
2283 3930 9.703892 GCATTGTAGAGTATAGATTCACTCATT 57.296 33.333 4.70 0.00 42.99 2.57
2284 3931 8.864087 TGCATTGTAGAGTATAGATTCACTCAT 58.136 33.333 4.70 0.00 42.99 2.90
2285 3932 8.237811 TGCATTGTAGAGTATAGATTCACTCA 57.762 34.615 4.70 0.00 42.99 3.41
2286 3933 9.703892 AATGCATTGTAGAGTATAGATTCACTC 57.296 33.333 12.09 0.00 41.25 3.51
2323 3970 7.448420 AGAGATTTCACTATGGACCACATATG 58.552 38.462 0.00 0.00 41.07 1.78
2324 3971 7.623999 AGAGATTTCACTATGGACCACATAT 57.376 36.000 0.00 0.00 41.07 1.78
2325 3972 8.727100 ATAGAGATTTCACTATGGACCACATA 57.273 34.615 0.00 0.00 41.03 2.29
2326 3973 5.965033 AGAGATTTCACTATGGACCACAT 57.035 39.130 0.00 0.00 43.68 3.21
2327 3974 8.547481 TTATAGAGATTTCACTATGGACCACA 57.453 34.615 0.00 0.00 33.08 4.17
2328 3975 9.482627 CTTTATAGAGATTTCACTATGGACCAC 57.517 37.037 0.00 0.00 33.08 4.16
2329 3976 9.434275 TCTTTATAGAGATTTCACTATGGACCA 57.566 33.333 0.00 0.00 33.08 4.02
2330 3977 9.699703 GTCTTTATAGAGATTTCACTATGGACC 57.300 37.037 7.52 0.00 33.08 4.46
2361 4008 9.566432 CATGCTATTTACTCCCTCTTTCTAAAT 57.434 33.333 0.00 0.00 0.00 1.40
2362 4009 8.548877 ACATGCTATTTACTCCCTCTTTCTAAA 58.451 33.333 0.00 0.00 0.00 1.85
2363 4010 7.987458 CACATGCTATTTACTCCCTCTTTCTAA 59.013 37.037 0.00 0.00 0.00 2.10
2364 4011 7.419057 CCACATGCTATTTACTCCCTCTTTCTA 60.419 40.741 0.00 0.00 0.00 2.10
2365 4012 6.352516 CACATGCTATTTACTCCCTCTTTCT 58.647 40.000 0.00 0.00 0.00 2.52
2366 4013 5.529060 CCACATGCTATTTACTCCCTCTTTC 59.471 44.000 0.00 0.00 0.00 2.62
2367 4014 5.440610 CCACATGCTATTTACTCCCTCTTT 58.559 41.667 0.00 0.00 0.00 2.52
2368 4015 4.141390 CCCACATGCTATTTACTCCCTCTT 60.141 45.833 0.00 0.00 0.00 2.85
2369 4016 3.392616 CCCACATGCTATTTACTCCCTCT 59.607 47.826 0.00 0.00 0.00 3.69
2370 4017 3.136626 ACCCACATGCTATTTACTCCCTC 59.863 47.826 0.00 0.00 0.00 4.30
2371 4018 3.123273 ACCCACATGCTATTTACTCCCT 58.877 45.455 0.00 0.00 0.00 4.20
2372 4019 3.577805 ACCCACATGCTATTTACTCCC 57.422 47.619 0.00 0.00 0.00 4.30
2373 4020 3.632145 CCAACCCACATGCTATTTACTCC 59.368 47.826 0.00 0.00 0.00 3.85
2374 4021 4.270008 ACCAACCCACATGCTATTTACTC 58.730 43.478 0.00 0.00 0.00 2.59
2375 4022 4.018415 AGACCAACCCACATGCTATTTACT 60.018 41.667 0.00 0.00 0.00 2.24
2376 4023 4.270008 AGACCAACCCACATGCTATTTAC 58.730 43.478 0.00 0.00 0.00 2.01
2377 4024 4.584638 AGACCAACCCACATGCTATTTA 57.415 40.909 0.00 0.00 0.00 1.40
2378 4025 3.456380 AGACCAACCCACATGCTATTT 57.544 42.857 0.00 0.00 0.00 1.40
2379 4026 3.356290 GAAGACCAACCCACATGCTATT 58.644 45.455 0.00 0.00 0.00 1.73
2380 4027 2.357154 GGAAGACCAACCCACATGCTAT 60.357 50.000 0.00 0.00 35.97 2.97
2381 4028 1.004277 GGAAGACCAACCCACATGCTA 59.996 52.381 0.00 0.00 35.97 3.49
2382 4029 0.251341 GGAAGACCAACCCACATGCT 60.251 55.000 0.00 0.00 35.97 3.79
2383 4030 0.539438 TGGAAGACCAACCCACATGC 60.539 55.000 0.00 0.00 43.91 4.06
2384 4031 3.743714 TGGAAGACCAACCCACATG 57.256 52.632 0.00 0.00 43.91 3.21
2393 4040 7.425224 TTTACTTTTGGATTTTGGAAGACCA 57.575 32.000 0.00 0.00 45.34 4.02
2394 4041 7.931407 ACATTTACTTTTGGATTTTGGAAGACC 59.069 33.333 0.00 0.00 0.00 3.85
2395 4042 8.764287 CACATTTACTTTTGGATTTTGGAAGAC 58.236 33.333 0.00 0.00 0.00 3.01
2396 4043 8.482128 ACACATTTACTTTTGGATTTTGGAAGA 58.518 29.630 0.00 0.00 0.00 2.87
2397 4044 8.661352 ACACATTTACTTTTGGATTTTGGAAG 57.339 30.769 0.00 0.00 0.00 3.46
2398 4045 9.757227 CTACACATTTACTTTTGGATTTTGGAA 57.243 29.630 0.00 0.00 0.00 3.53
2399 4046 8.919145 ACTACACATTTACTTTTGGATTTTGGA 58.081 29.630 0.00 0.00 0.00 3.53
2400 4047 8.977505 CACTACACATTTACTTTTGGATTTTGG 58.022 33.333 0.00 0.00 0.00 3.28
2401 4048 9.528018 ACACTACACATTTACTTTTGGATTTTG 57.472 29.630 0.00 0.00 0.00 2.44
2404 4051 9.344772 TGTACACTACACATTTACTTTTGGATT 57.655 29.630 0.00 0.00 32.89 3.01
2405 4052 8.911918 TGTACACTACACATTTACTTTTGGAT 57.088 30.769 0.00 0.00 32.89 3.41
2406 4053 8.734218 TTGTACACTACACATTTACTTTTGGA 57.266 30.769 0.00 0.00 38.63 3.53
2407 4054 9.959749 ATTTGTACACTACACATTTACTTTTGG 57.040 29.630 0.00 0.00 38.63 3.28
2411 4058 9.344772 TGGAATTTGTACACTACACATTTACTT 57.655 29.630 0.00 0.00 38.70 2.24
2412 4059 8.911918 TGGAATTTGTACACTACACATTTACT 57.088 30.769 0.00 0.00 38.70 2.24
2413 4060 9.953697 TTTGGAATTTGTACACTACACATTTAC 57.046 29.630 0.00 0.00 38.70 2.01
2416 4063 9.474920 CATTTTGGAATTTGTACACTACACATT 57.525 29.630 0.00 0.00 40.60 2.71
2417 4064 7.598493 GCATTTTGGAATTTGTACACTACACAT 59.402 33.333 0.00 0.00 38.63 3.21
2418 4065 6.920758 GCATTTTGGAATTTGTACACTACACA 59.079 34.615 0.00 0.00 38.63 3.72
2419 4066 7.145323 AGCATTTTGGAATTTGTACACTACAC 58.855 34.615 0.00 0.00 38.63 2.90
2420 4067 7.283625 AGCATTTTGGAATTTGTACACTACA 57.716 32.000 0.00 0.00 36.79 2.74
2421 4068 7.968405 CCTAGCATTTTGGAATTTGTACACTAC 59.032 37.037 0.00 0.00 0.00 2.73
2422 4069 7.362574 GCCTAGCATTTTGGAATTTGTACACTA 60.363 37.037 0.00 0.00 0.00 2.74
2423 4070 6.572314 GCCTAGCATTTTGGAATTTGTACACT 60.572 38.462 0.00 0.00 0.00 3.55
2424 4071 5.576774 GCCTAGCATTTTGGAATTTGTACAC 59.423 40.000 0.00 0.00 0.00 2.90
2425 4072 5.244851 TGCCTAGCATTTTGGAATTTGTACA 59.755 36.000 0.00 0.00 31.71 2.90
2426 4073 5.719173 TGCCTAGCATTTTGGAATTTGTAC 58.281 37.500 0.00 0.00 31.71 2.90
2427 4074 5.991933 TGCCTAGCATTTTGGAATTTGTA 57.008 34.783 0.00 0.00 31.71 2.41
2428 4075 4.888326 TGCCTAGCATTTTGGAATTTGT 57.112 36.364 0.00 0.00 31.71 2.83
2429 4076 5.789710 CTTGCCTAGCATTTTGGAATTTG 57.210 39.130 0.00 0.00 38.76 2.32
2443 4090 1.965930 TTGCACGTGGCTTGCCTAG 60.966 57.895 18.88 8.96 45.15 3.02
2444 4091 2.112087 TTGCACGTGGCTTGCCTA 59.888 55.556 18.88 0.00 45.15 3.93
2445 4092 2.674563 TAGTTGCACGTGGCTTGCCT 62.675 55.000 18.88 6.99 45.15 4.75
2446 4093 2.258013 TAGTTGCACGTGGCTTGCC 61.258 57.895 18.88 4.43 45.15 4.52
2447 4094 1.082104 GTAGTTGCACGTGGCTTGC 60.082 57.895 18.88 2.34 45.15 4.01
2448 4095 0.041312 GTGTAGTTGCACGTGGCTTG 60.041 55.000 18.88 0.00 45.15 4.01
2449 4096 1.164041 GGTGTAGTTGCACGTGGCTT 61.164 55.000 18.88 3.19 45.15 4.35
2450 4097 1.597027 GGTGTAGTTGCACGTGGCT 60.597 57.895 18.88 0.00 45.15 4.75
2451 4098 1.566018 GAGGTGTAGTTGCACGTGGC 61.566 60.000 18.88 10.30 45.13 5.01
2452 4099 0.949105 GGAGGTGTAGTTGCACGTGG 60.949 60.000 18.88 0.00 40.08 4.94
2453 4100 1.282248 CGGAGGTGTAGTTGCACGTG 61.282 60.000 12.28 12.28 40.08 4.49
2454 4101 1.006571 CGGAGGTGTAGTTGCACGT 60.007 57.895 0.00 0.00 40.08 4.49
2455 4102 2.380410 GCGGAGGTGTAGTTGCACG 61.380 63.158 0.00 0.00 40.08 5.34
2456 4103 2.033194 GGCGGAGGTGTAGTTGCAC 61.033 63.158 0.00 0.00 38.56 4.57
2457 4104 2.345991 GGCGGAGGTGTAGTTGCA 59.654 61.111 0.00 0.00 0.00 4.08
2458 4105 2.813908 CGGCGGAGGTGTAGTTGC 60.814 66.667 0.00 0.00 0.00 4.17
2459 4106 2.813908 GCGGCGGAGGTGTAGTTG 60.814 66.667 9.78 0.00 0.00 3.16
2460 4107 2.995574 AGCGGCGGAGGTGTAGTT 60.996 61.111 9.78 0.00 0.00 2.24
2461 4108 3.450115 GAGCGGCGGAGGTGTAGT 61.450 66.667 9.78 0.00 0.00 2.73
2462 4109 4.554363 CGAGCGGCGGAGGTGTAG 62.554 72.222 9.78 0.00 36.03 2.74
2472 4119 1.938329 GTAGTTACTCGCGAGCGGC 60.938 63.158 34.83 23.27 40.25 6.53
2473 4120 0.589229 CTGTAGTTACTCGCGAGCGG 60.589 60.000 34.83 18.54 40.25 5.52
2474 4121 0.096628 ACTGTAGTTACTCGCGAGCG 59.903 55.000 34.83 15.24 41.35 5.03
2475 4122 1.912110 CAACTGTAGTTACTCGCGAGC 59.088 52.381 34.83 19.34 36.32 5.03
2476 4123 1.912110 GCAACTGTAGTTACTCGCGAG 59.088 52.381 33.45 33.45 36.32 5.03
2477 4124 1.267533 TGCAACTGTAGTTACTCGCGA 59.732 47.619 9.26 9.26 36.32 5.87
2478 4125 1.385743 GTGCAACTGTAGTTACTCGCG 59.614 52.381 0.00 0.00 36.32 5.87
2479 4126 1.725164 GGTGCAACTGTAGTTACTCGC 59.275 52.381 0.00 0.00 36.32 5.03
2480 4127 2.729882 GTGGTGCAACTGTAGTTACTCG 59.270 50.000 2.04 0.00 36.32 4.18
2481 4128 3.064931 GGTGGTGCAACTGTAGTTACTC 58.935 50.000 2.04 0.00 36.32 2.59
2482 4129 2.436542 TGGTGGTGCAACTGTAGTTACT 59.563 45.455 2.04 0.00 36.32 2.24
2483 4130 2.546789 GTGGTGGTGCAACTGTAGTTAC 59.453 50.000 2.04 0.00 36.32 2.50
2484 4131 2.436542 AGTGGTGGTGCAACTGTAGTTA 59.563 45.455 2.04 0.00 36.32 2.24
2485 4132 1.211949 AGTGGTGGTGCAACTGTAGTT 59.788 47.619 2.04 0.00 39.12 2.24
2486 4133 0.837272 AGTGGTGGTGCAACTGTAGT 59.163 50.000 2.04 0.00 36.74 2.73
2487 4134 2.037251 ACTAGTGGTGGTGCAACTGTAG 59.963 50.000 2.04 0.00 36.74 2.74
2488 4135 2.036733 GACTAGTGGTGGTGCAACTGTA 59.963 50.000 2.04 0.00 36.74 2.74
2489 4136 0.837272 ACTAGTGGTGGTGCAACTGT 59.163 50.000 2.04 0.00 36.74 3.55
2490 4137 1.070758 AGACTAGTGGTGGTGCAACTG 59.929 52.381 2.04 0.00 36.74 3.16
2491 4138 1.424638 AGACTAGTGGTGGTGCAACT 58.575 50.000 2.04 0.00 36.74 3.16
2492 4139 2.931320 GCTAGACTAGTGGTGGTGCAAC 60.931 54.545 11.15 0.00 0.00 4.17
2493 4140 1.275291 GCTAGACTAGTGGTGGTGCAA 59.725 52.381 11.15 0.00 0.00 4.08
2494 4141 0.895530 GCTAGACTAGTGGTGGTGCA 59.104 55.000 11.15 0.00 0.00 4.57
2495 4142 0.179134 CGCTAGACTAGTGGTGGTGC 60.179 60.000 14.24 0.00 32.78 5.01
2496 4143 0.179134 GCGCTAGACTAGTGGTGGTG 60.179 60.000 21.60 0.00 36.81 4.17
2497 4144 0.611062 TGCGCTAGACTAGTGGTGGT 60.611 55.000 21.60 0.00 36.81 4.16
2498 4145 0.530744 TTGCGCTAGACTAGTGGTGG 59.469 55.000 21.60 4.35 36.81 4.61
2499 4146 1.202582 AGTTGCGCTAGACTAGTGGTG 59.797 52.381 21.60 6.92 36.81 4.17
2500 4147 1.202582 CAGTTGCGCTAGACTAGTGGT 59.797 52.381 21.60 0.00 36.81 4.16
2501 4148 1.914634 CAGTTGCGCTAGACTAGTGG 58.085 55.000 21.60 10.74 36.81 4.00
2502 4149 1.272781 GCAGTTGCGCTAGACTAGTG 58.727 55.000 17.16 17.16 39.26 2.74
2503 4150 0.888619 TGCAGTTGCGCTAGACTAGT 59.111 50.000 9.73 0.00 45.83 2.57
2504 4151 1.554392 CTGCAGTTGCGCTAGACTAG 58.446 55.000 9.73 5.03 45.83 2.57
2505 4152 0.173481 CCTGCAGTTGCGCTAGACTA 59.827 55.000 13.81 0.00 45.83 2.59
2506 4153 1.079543 CCTGCAGTTGCGCTAGACT 60.080 57.895 13.81 7.42 45.83 3.24
2507 4154 2.744768 GCCTGCAGTTGCGCTAGAC 61.745 63.158 13.81 4.90 45.83 2.59
2508 4155 2.434884 GCCTGCAGTTGCGCTAGA 60.435 61.111 13.81 0.00 45.83 2.43
2509 4156 2.435586 AGCCTGCAGTTGCGCTAG 60.436 61.111 13.81 0.00 45.83 3.42
2510 4157 2.434884 GAGCCTGCAGTTGCGCTA 60.435 61.111 13.81 0.00 45.83 4.26
2514 4161 4.099170 CAGCGAGCCTGCAGTTGC 62.099 66.667 13.81 10.66 42.50 4.17
2515 4162 2.667536 ACAGCGAGCCTGCAGTTG 60.668 61.111 13.81 0.00 45.78 3.16
2516 4163 2.358003 GACAGCGAGCCTGCAGTT 60.358 61.111 13.81 0.00 45.78 3.16
2517 4164 4.385405 GGACAGCGAGCCTGCAGT 62.385 66.667 13.81 0.00 45.78 4.40
2528 4175 0.804544 TATAGTTGTGCGCGGACAGC 60.805 55.000 33.80 33.80 43.95 4.40
2529 4176 1.200483 CTATAGTTGTGCGCGGACAG 58.800 55.000 31.58 16.57 0.00 3.51
2530 4177 0.804544 GCTATAGTTGTGCGCGGACA 60.805 55.000 30.21 30.21 0.00 4.02
2531 4178 1.808234 CGCTATAGTTGTGCGCGGAC 61.808 60.000 24.88 24.88 43.08 4.79
2532 4179 1.587876 CGCTATAGTTGTGCGCGGA 60.588 57.895 8.83 0.00 43.08 5.54
2533 4180 2.920869 CGCTATAGTTGTGCGCGG 59.079 61.111 8.83 0.00 43.08 6.46
2537 4184 0.868406 GATGGGCGCTATAGTTGTGC 59.132 55.000 7.64 1.17 39.88 4.57
2538 4185 1.139989 CGATGGGCGCTATAGTTGTG 58.860 55.000 7.64 0.00 0.00 3.33
2539 4186 1.037493 TCGATGGGCGCTATAGTTGT 58.963 50.000 7.64 0.00 40.61 3.32
2540 4187 1.000163 AGTCGATGGGCGCTATAGTTG 60.000 52.381 7.64 0.00 40.61 3.16
2541 4188 1.000163 CAGTCGATGGGCGCTATAGTT 60.000 52.381 7.64 0.00 40.61 2.24
2542 4189 0.598562 CAGTCGATGGGCGCTATAGT 59.401 55.000 7.64 0.00 40.61 2.12
2543 4190 0.734253 GCAGTCGATGGGCGCTATAG 60.734 60.000 7.64 3.10 40.61 1.31
2544 4191 1.179174 AGCAGTCGATGGGCGCTATA 61.179 55.000 7.64 0.00 40.61 1.31
2545 4192 2.029666 GCAGTCGATGGGCGCTAT 59.970 61.111 7.64 1.68 40.61 2.97
2546 4193 2.721167 AAGCAGTCGATGGGCGCTA 61.721 57.895 7.64 0.00 40.61 4.26
2547 4194 4.087892 AAGCAGTCGATGGGCGCT 62.088 61.111 7.64 0.00 40.61 5.92
2548 4195 3.869272 CAAGCAGTCGATGGGCGC 61.869 66.667 0.00 0.00 40.61 6.53
2549 4196 3.869272 GCAAGCAGTCGATGGGCG 61.869 66.667 0.00 0.00 42.69 6.13
2550 4197 3.512516 GGCAAGCAGTCGATGGGC 61.513 66.667 0.00 0.00 0.00 5.36
2551 4198 1.033746 ATTGGCAAGCAGTCGATGGG 61.034 55.000 5.96 0.00 0.00 4.00
2552 4199 1.331756 GTATTGGCAAGCAGTCGATGG 59.668 52.381 5.96 0.00 0.00 3.51
2553 4200 2.031314 CAGTATTGGCAAGCAGTCGATG 59.969 50.000 5.96 0.00 0.00 3.84
2554 4201 2.283298 CAGTATTGGCAAGCAGTCGAT 58.717 47.619 5.96 0.00 0.00 3.59
2555 4202 1.001974 ACAGTATTGGCAAGCAGTCGA 59.998 47.619 5.96 0.00 0.00 4.20
2556 4203 1.442769 ACAGTATTGGCAAGCAGTCG 58.557 50.000 5.96 0.00 0.00 4.18
2557 4204 5.154222 GTTTAACAGTATTGGCAAGCAGTC 58.846 41.667 5.96 0.00 0.00 3.51
2558 4205 4.320202 CGTTTAACAGTATTGGCAAGCAGT 60.320 41.667 5.96 1.51 0.00 4.40
2559 4206 4.158384 CGTTTAACAGTATTGGCAAGCAG 58.842 43.478 5.96 0.86 0.00 4.24
2560 4207 3.566322 ACGTTTAACAGTATTGGCAAGCA 59.434 39.130 5.96 0.00 0.00 3.91
2561 4208 4.155310 ACGTTTAACAGTATTGGCAAGC 57.845 40.909 5.96 1.00 0.00 4.01
2562 4209 4.214545 TGGACGTTTAACAGTATTGGCAAG 59.785 41.667 5.96 0.00 0.00 4.01
2563 4210 4.023878 GTGGACGTTTAACAGTATTGGCAA 60.024 41.667 0.68 0.68 0.00 4.52
2564 4211 3.499157 GTGGACGTTTAACAGTATTGGCA 59.501 43.478 0.00 0.00 0.00 4.92
2565 4212 3.120095 GGTGGACGTTTAACAGTATTGGC 60.120 47.826 0.00 0.00 0.00 4.52
2566 4213 3.123959 CGGTGGACGTTTAACAGTATTGG 59.876 47.826 0.00 0.00 37.93 3.16
2567 4214 3.423907 GCGGTGGACGTTTAACAGTATTG 60.424 47.826 0.00 0.00 46.52 1.90
2568 4215 2.738314 GCGGTGGACGTTTAACAGTATT 59.262 45.455 0.00 0.00 46.52 1.89
2569 4216 2.028748 AGCGGTGGACGTTTAACAGTAT 60.029 45.455 0.00 0.00 46.52 2.12
2570 4217 1.340889 AGCGGTGGACGTTTAACAGTA 59.659 47.619 0.00 0.00 46.52 2.74
2571 4218 0.105408 AGCGGTGGACGTTTAACAGT 59.895 50.000 0.00 0.00 46.52 3.55
2572 4219 1.223187 AAGCGGTGGACGTTTAACAG 58.777 50.000 0.00 0.00 44.36 3.16
2573 4220 2.522836 TAAGCGGTGGACGTTTAACA 57.477 45.000 0.00 0.00 44.36 2.41
2576 4223 3.105514 CGTAAGCGGTGGACGTTTA 57.894 52.632 12.65 0.00 44.36 2.01
2589 4236 5.217393 TGTGCTATTATAGTTCGGCGTAAG 58.783 41.667 6.85 0.00 43.44 2.34
2590 4237 5.185668 TGTGCTATTATAGTTCGGCGTAA 57.814 39.130 6.85 0.00 0.00 3.18
2591 4238 4.834357 TGTGCTATTATAGTTCGGCGTA 57.166 40.909 6.85 0.00 0.00 4.42
2592 4239 3.720949 TGTGCTATTATAGTTCGGCGT 57.279 42.857 6.85 0.00 0.00 5.68
2593 4240 3.300853 CGATGTGCTATTATAGTTCGGCG 59.699 47.826 0.00 0.00 0.00 6.46
2594 4241 3.060895 GCGATGTGCTATTATAGTTCGGC 59.939 47.826 0.94 0.00 41.73 5.54
2595 4242 4.824848 GCGATGTGCTATTATAGTTCGG 57.175 45.455 0.94 0.00 41.73 4.30
2608 4255 3.195698 GACCCGGAAGCGATGTGC 61.196 66.667 0.73 0.00 46.98 4.57
2609 4256 2.885644 CGACCCGGAAGCGATGTG 60.886 66.667 0.73 0.00 0.00 3.21
2610 4257 3.379445 ACGACCCGGAAGCGATGT 61.379 61.111 0.73 0.00 0.00 3.06
2611 4258 2.885644 CACGACCCGGAAGCGATG 60.886 66.667 0.73 1.29 0.00 3.84
2612 4259 4.814294 GCACGACCCGGAAGCGAT 62.814 66.667 0.73 0.00 0.00 4.58


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.