Multiple sequence alignment - TraesCS4A01G459800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G459800 chr4A 100.000 2333 0 0 1 2333 725589525 725587193 0.000000e+00 4309.0
1 TraesCS4A01G459800 chr4A 82.620 794 119 10 544 1329 725659306 725658524 0.000000e+00 684.0
2 TraesCS4A01G459800 chr4A 86.041 437 49 7 1 429 725659850 725659418 2.110000e-125 459.0
3 TraesCS4A01G459800 chr4A 93.056 72 5 0 443 514 725659375 725659304 3.170000e-19 106.0
4 TraesCS4A01G459800 chr7A 89.068 1491 110 19 1 1443 12180816 12182301 0.000000e+00 1801.0
5 TraesCS4A01G459800 chr7A 93.590 156 10 0 1547 1702 12184154 12184309 1.390000e-57 233.0
6 TraesCS4A01G459800 chr7A 93.860 114 7 0 1433 1546 12184092 12184205 3.080000e-39 172.0
7 TraesCS4A01G459800 chr5A 83.909 839 127 8 487 1322 537109590 537110423 0.000000e+00 795.0
8 TraesCS4A01G459800 chr7D 80.479 876 134 19 549 1420 12475848 12476690 9.090000e-179 636.0
9 TraesCS4A01G459800 chr7D 88.399 431 46 3 1 429 12471189 12471617 1.240000e-142 516.0
10 TraesCS4A01G459800 chr7D 89.783 323 29 3 2012 2333 62164859 62165178 6.000000e-111 411.0
11 TraesCS4A01G459800 chr7D 91.133 203 7 7 1819 2011 12471791 12471992 4.940000e-67 265.0
12 TraesCS4A01G459800 chr7D 93.902 82 5 0 434 515 12471651 12471732 8.750000e-25 124.0
13 TraesCS4A01G459800 chr7D 87.912 91 10 1 431 520 616459489 616459399 3.170000e-19 106.0
14 TraesCS4A01G459800 chr7D 96.721 61 2 0 550 610 12471735 12471795 4.100000e-18 102.0
15 TraesCS4A01G459800 chr1D 92.429 317 22 1 2016 2332 478577859 478577545 3.540000e-123 451.0
16 TraesCS4A01G459800 chr1D 91.615 322 24 2 2012 2332 89230875 89231194 2.130000e-120 442.0
17 TraesCS4A01G459800 chr1D 81.295 139 24 2 451 589 450203774 450203910 6.810000e-21 111.0
18 TraesCS4A01G459800 chr4D 91.277 321 25 2 2013 2333 489337851 489337534 3.560000e-118 435.0
19 TraesCS4A01G459800 chr2D 90.549 328 21 6 2005 2332 172992160 172991843 2.140000e-115 425.0
20 TraesCS4A01G459800 chr2D 89.783 323 30 2 2012 2333 27604064 27604384 6.000000e-111 411.0
21 TraesCS4A01G459800 chr5D 89.426 331 31 3 2007 2333 99924452 99924122 4.640000e-112 414.0
22 TraesCS4A01G459800 chr5D 88.889 324 32 2 2011 2333 495365107 495364787 1.680000e-106 396.0
23 TraesCS4A01G459800 chr3A 89.506 324 29 4 2011 2333 12728793 12728474 2.790000e-109 405.0
24 TraesCS4A01G459800 chr1B 76.731 361 71 8 431 782 617088173 617088529 3.060000e-44 189.0
25 TraesCS4A01G459800 chr1B 85.882 85 11 1 431 514 617087671 617087755 3.190000e-14 89.8
26 TraesCS4A01G459800 chr1A 87.912 91 10 1 431 520 545473998 545474088 3.170000e-19 106.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G459800 chr4A 725587193 725589525 2332 True 4309.000000 4309 100.000000 1 2333 1 chr4A.!!$R1 2332
1 TraesCS4A01G459800 chr4A 725658524 725659850 1326 True 416.333333 684 87.239000 1 1329 3 chr4A.!!$R2 1328
2 TraesCS4A01G459800 chr7A 12180816 12184309 3493 False 735.333333 1801 92.172667 1 1702 3 chr7A.!!$F1 1701
3 TraesCS4A01G459800 chr5A 537109590 537110423 833 False 795.000000 795 83.909000 487 1322 1 chr5A.!!$F1 835
4 TraesCS4A01G459800 chr7D 12471189 12476690 5501 False 328.600000 636 90.126800 1 2011 5 chr7D.!!$F2 2010

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
519 562 0.035439 CCACCGCCAAACTGGATACT 60.035 55.0 0.0 0.0 40.96 2.12 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1985 7991 0.035439 AAGTGTCCCATTAGCACCCG 60.035 55.0 0.0 0.0 33.96 5.28 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
63 64 6.905578 TCTTAAAATAAAACGGCAACCTCTC 58.094 36.000 0.00 0.00 0.00 3.20
86 87 9.777173 TCTCGCAGTTGAGATCTGGAAGAAAAA 62.777 40.741 0.00 0.00 39.14 1.94
127 128 2.003072 AGGTGATGGTTTTCCCCTGAT 58.997 47.619 0.00 0.00 39.73 2.90
134 135 1.207811 GGTTTTCCCCTGATGCATTGG 59.792 52.381 0.00 6.68 0.00 3.16
233 242 7.453752 AGGGAGATACGAAAATTAGCACCTATA 59.546 37.037 0.00 0.00 0.00 1.31
274 283 6.227298 AGGCATTAATACGAGGATATCCAG 57.773 41.667 23.81 18.22 38.89 3.86
291 304 4.487714 TCCAGAATGAGGACCAACATAC 57.512 45.455 0.00 0.00 39.69 2.39
306 319 5.880332 ACCAACATACTTGTGCATACCTAAG 59.120 40.000 0.00 0.00 35.83 2.18
318 331 8.916628 TGTGCATACCTAAGCAATATTCATTA 57.083 30.769 0.00 0.00 43.20 1.90
363 376 6.801539 ATATACTGCATTAATGAACCACCG 57.198 37.500 19.73 0.00 0.00 4.94
372 385 0.690192 ATGAACCACCGACACATCCA 59.310 50.000 0.00 0.00 0.00 3.41
374 387 0.953960 GAACCACCGACACATCCACC 60.954 60.000 0.00 0.00 0.00 4.61
382 395 1.549203 GACACATCCACCCAAGCAAT 58.451 50.000 0.00 0.00 0.00 3.56
388 402 1.473258 TCCACCCAAGCAATGCATAC 58.527 50.000 8.35 0.00 0.00 2.39
391 405 1.677576 CACCCAAGCAATGCATACGAT 59.322 47.619 8.35 0.00 0.00 3.73
395 409 3.005050 CCCAAGCAATGCATACGATGAAT 59.995 43.478 8.35 0.00 0.00 2.57
398 412 6.093909 CCCAAGCAATGCATACGATGAATATA 59.906 38.462 8.35 0.00 0.00 0.86
399 413 7.361971 CCCAAGCAATGCATACGATGAATATAA 60.362 37.037 8.35 0.00 0.00 0.98
440 483 1.193323 AGCTGTGTCAGGAGATCCAG 58.807 55.000 0.92 0.00 38.89 3.86
512 555 0.916086 TGGATATCCACCGCCAAACT 59.084 50.000 20.98 0.00 42.01 2.66
513 556 1.308998 GGATATCCACCGCCAAACTG 58.691 55.000 17.34 0.00 35.64 3.16
514 557 1.308998 GATATCCACCGCCAAACTGG 58.691 55.000 0.00 0.00 41.55 4.00
515 558 0.916086 ATATCCACCGCCAAACTGGA 59.084 50.000 0.00 0.00 40.96 3.86
516 559 0.916086 TATCCACCGCCAAACTGGAT 59.084 50.000 3.96 3.96 45.16 3.41
517 560 0.916086 ATCCACCGCCAAACTGGATA 59.084 50.000 0.00 0.00 42.05 2.59
518 561 0.035820 TCCACCGCCAAACTGGATAC 60.036 55.000 0.00 0.00 40.96 2.24
519 562 0.035439 CCACCGCCAAACTGGATACT 60.035 55.000 0.00 0.00 40.96 2.12
520 563 1.613255 CCACCGCCAAACTGGATACTT 60.613 52.381 0.00 0.00 40.96 2.24
521 564 1.468520 CACCGCCAAACTGGATACTTG 59.531 52.381 0.00 0.00 40.96 3.16
522 565 0.451783 CCGCCAAACTGGATACTTGC 59.548 55.000 0.00 0.00 40.96 4.01
523 566 1.164411 CGCCAAACTGGATACTTGCA 58.836 50.000 0.00 0.00 40.96 4.08
524 567 1.745087 CGCCAAACTGGATACTTGCAT 59.255 47.619 0.00 0.00 40.96 3.96
525 568 2.164219 CGCCAAACTGGATACTTGCATT 59.836 45.455 0.00 0.00 40.96 3.56
526 569 3.731867 CGCCAAACTGGATACTTGCATTC 60.732 47.826 0.00 0.00 40.96 2.67
527 570 3.193267 GCCAAACTGGATACTTGCATTCA 59.807 43.478 0.00 0.00 40.96 2.57
528 571 4.737054 CCAAACTGGATACTTGCATTCAC 58.263 43.478 0.00 0.00 40.96 3.18
529 572 4.406069 CAAACTGGATACTTGCATTCACG 58.594 43.478 0.00 0.00 37.61 4.35
530 573 3.610040 ACTGGATACTTGCATTCACGA 57.390 42.857 0.00 0.00 37.61 4.35
531 574 3.937814 ACTGGATACTTGCATTCACGAA 58.062 40.909 0.00 0.00 37.61 3.85
532 575 4.323417 ACTGGATACTTGCATTCACGAAA 58.677 39.130 0.00 0.00 37.61 3.46
533 576 4.154195 ACTGGATACTTGCATTCACGAAAC 59.846 41.667 0.00 0.00 37.61 2.78
534 577 3.438781 TGGATACTTGCATTCACGAAACC 59.561 43.478 0.00 0.00 37.61 3.27
535 578 3.181500 GGATACTTGCATTCACGAAACCC 60.181 47.826 0.00 0.00 0.00 4.11
536 579 0.958822 ACTTGCATTCACGAAACCCC 59.041 50.000 0.00 0.00 0.00 4.95
537 580 0.243636 CTTGCATTCACGAAACCCCC 59.756 55.000 0.00 0.00 0.00 5.40
538 581 0.468214 TTGCATTCACGAAACCCCCA 60.468 50.000 0.00 0.00 0.00 4.96
539 582 1.175983 TGCATTCACGAAACCCCCAC 61.176 55.000 0.00 0.00 0.00 4.61
540 583 0.893727 GCATTCACGAAACCCCCACT 60.894 55.000 0.00 0.00 0.00 4.00
541 584 0.881118 CATTCACGAAACCCCCACTG 59.119 55.000 0.00 0.00 0.00 3.66
542 585 0.893727 ATTCACGAAACCCCCACTGC 60.894 55.000 0.00 0.00 0.00 4.40
543 586 2.969300 TTCACGAAACCCCCACTGCC 62.969 60.000 0.00 0.00 0.00 4.85
565 643 6.934645 TGCCTGAACTGTATAAATACCTATGC 59.065 38.462 0.00 0.00 32.33 3.14
608 4798 2.364324 CCATCCATCCATTTCTGCCTTG 59.636 50.000 0.00 0.00 0.00 3.61
630 4823 4.202253 TGGTCATCGGTCTCTATCCATTTG 60.202 45.833 0.00 0.00 0.00 2.32
730 4923 1.138859 TCTCCGCCATCGTCATCATTT 59.861 47.619 0.00 0.00 0.00 2.32
740 4933 6.624423 CCATCGTCATCATTTTTCTTTCCTT 58.376 36.000 0.00 0.00 0.00 3.36
781 4974 4.166011 GCGATGTCGGTGGCAAGC 62.166 66.667 4.44 0.00 40.23 4.01
809 5005 3.496692 CCAACTGACTTCATGGTGGAAGA 60.497 47.826 9.67 0.00 45.66 2.87
822 5018 0.179059 TGGAAGAGTGCAAGAACGCA 60.179 50.000 0.00 0.00 40.32 5.24
846 5042 1.372501 ACTGGTCCAAGGGCTACAAT 58.627 50.000 0.00 0.00 0.00 2.71
847 5043 1.282157 ACTGGTCCAAGGGCTACAATC 59.718 52.381 0.00 0.00 0.00 2.67
855 5051 3.947834 CCAAGGGCTACAATCAAGGTTAG 59.052 47.826 0.00 0.00 0.00 2.34
885 5081 0.746659 CCCCGGAATTTTGCATCTCC 59.253 55.000 0.73 0.00 0.00 3.71
1142 5338 1.016653 GGTGACAAGAGAAGCGAGGC 61.017 60.000 0.00 0.00 0.00 4.70
1275 5474 1.734465 CTTGTCAAGGAAGGCGATGAC 59.266 52.381 4.52 0.00 41.90 3.06
1401 5606 7.116662 TGCAACATCAAATCTACTTTCATTTGC 59.883 33.333 0.00 0.00 39.08 3.68
1497 7503 6.529829 TCTGAAACAAGATTTGACAAAAACCG 59.470 34.615 4.41 0.00 0.00 4.44
1511 7517 4.634703 ACCGTGGCGTTCCATGCA 62.635 61.111 0.00 0.00 45.92 3.96
1512 7518 3.361158 CCGTGGCGTTCCATGCAA 61.361 61.111 0.00 0.00 45.92 4.08
1513 7519 2.642129 CGTGGCGTTCCATGCAAA 59.358 55.556 0.00 0.00 45.62 3.68
1514 7520 1.212490 CGTGGCGTTCCATGCAAAT 59.788 52.632 0.00 0.00 45.62 2.32
1515 7521 0.798009 CGTGGCGTTCCATGCAAATC 60.798 55.000 0.00 0.00 45.62 2.17
1516 7522 0.458370 GTGGCGTTCCATGCAAATCC 60.458 55.000 0.00 0.00 45.62 3.01
1517 7523 0.897401 TGGCGTTCCATGCAAATCCA 60.897 50.000 0.00 0.00 37.47 3.41
1518 7524 0.246086 GGCGTTCCATGCAAATCCAA 59.754 50.000 0.00 0.00 0.00 3.53
1519 7525 1.337635 GGCGTTCCATGCAAATCCAAA 60.338 47.619 0.00 0.00 0.00 3.28
1520 7526 2.411904 GCGTTCCATGCAAATCCAAAA 58.588 42.857 0.00 0.00 0.00 2.44
1521 7527 2.805099 GCGTTCCATGCAAATCCAAAAA 59.195 40.909 0.00 0.00 0.00 1.94
1522 7528 3.120580 GCGTTCCATGCAAATCCAAAAAG 60.121 43.478 0.00 0.00 0.00 2.27
1523 7529 3.120580 CGTTCCATGCAAATCCAAAAAGC 60.121 43.478 0.00 0.00 0.00 3.51
1524 7530 3.056588 TCCATGCAAATCCAAAAAGCC 57.943 42.857 0.00 0.00 0.00 4.35
1525 7531 2.371179 TCCATGCAAATCCAAAAAGCCA 59.629 40.909 0.00 0.00 0.00 4.75
1526 7532 3.147629 CCATGCAAATCCAAAAAGCCAA 58.852 40.909 0.00 0.00 0.00 4.52
1527 7533 3.058085 CCATGCAAATCCAAAAAGCCAAC 60.058 43.478 0.00 0.00 0.00 3.77
1528 7534 3.272574 TGCAAATCCAAAAAGCCAACA 57.727 38.095 0.00 0.00 0.00 3.33
1529 7535 3.818180 TGCAAATCCAAAAAGCCAACAT 58.182 36.364 0.00 0.00 0.00 2.71
1530 7536 4.965814 TGCAAATCCAAAAAGCCAACATA 58.034 34.783 0.00 0.00 0.00 2.29
1531 7537 5.371526 TGCAAATCCAAAAAGCCAACATAA 58.628 33.333 0.00 0.00 0.00 1.90
1532 7538 5.469421 TGCAAATCCAAAAAGCCAACATAAG 59.531 36.000 0.00 0.00 0.00 1.73
1533 7539 5.106594 GCAAATCCAAAAAGCCAACATAAGG 60.107 40.000 0.00 0.00 0.00 2.69
1534 7540 5.823861 AATCCAAAAAGCCAACATAAGGT 57.176 34.783 0.00 0.00 0.00 3.50
1535 7541 6.926630 AATCCAAAAAGCCAACATAAGGTA 57.073 33.333 0.00 0.00 0.00 3.08
1536 7542 6.926630 ATCCAAAAAGCCAACATAAGGTAA 57.073 33.333 0.00 0.00 0.00 2.85
1537 7543 6.091718 TCCAAAAAGCCAACATAAGGTAAC 57.908 37.500 0.00 0.00 0.00 2.50
1538 7544 5.598830 TCCAAAAAGCCAACATAAGGTAACA 59.401 36.000 0.00 0.00 41.41 2.41
1539 7545 6.268847 TCCAAAAAGCCAACATAAGGTAACAT 59.731 34.615 0.00 0.00 41.41 2.71
1540 7546 6.368516 CCAAAAAGCCAACATAAGGTAACATG 59.631 38.462 0.00 0.00 41.41 3.21
1541 7547 6.909550 AAAAGCCAACATAAGGTAACATGA 57.090 33.333 0.00 0.00 41.41 3.07
1542 7548 7.480760 AAAAGCCAACATAAGGTAACATGAT 57.519 32.000 0.00 0.00 41.41 2.45
1543 7549 7.480760 AAAGCCAACATAAGGTAACATGATT 57.519 32.000 0.00 0.00 41.41 2.57
1544 7550 7.480760 AAGCCAACATAAGGTAACATGATTT 57.519 32.000 0.00 0.00 41.41 2.17
1545 7551 7.480760 AGCCAACATAAGGTAACATGATTTT 57.519 32.000 0.00 0.00 41.41 1.82
1546 7552 8.588290 AGCCAACATAAGGTAACATGATTTTA 57.412 30.769 0.00 0.00 41.41 1.52
1547 7553 8.466798 AGCCAACATAAGGTAACATGATTTTAC 58.533 33.333 0.00 0.00 41.41 2.01
1548 7554 7.704899 GCCAACATAAGGTAACATGATTTTACC 59.295 37.037 11.61 11.61 46.21 2.85
1553 7559 4.023739 GGTAACATGATTTTACCGTGGC 57.976 45.455 4.90 0.00 39.28 5.01
1554 7560 2.911819 AACATGATTTTACCGTGGCG 57.088 45.000 0.00 0.00 0.00 5.69
1555 7561 1.816074 ACATGATTTTACCGTGGCGT 58.184 45.000 0.00 0.00 0.00 5.68
1556 7562 2.156098 ACATGATTTTACCGTGGCGTT 58.844 42.857 0.00 0.00 0.00 4.84
1557 7563 2.160813 ACATGATTTTACCGTGGCGTTC 59.839 45.455 0.00 0.00 0.00 3.95
1558 7564 1.158434 TGATTTTACCGTGGCGTTCC 58.842 50.000 0.00 0.00 0.00 3.62
1559 7565 1.158434 GATTTTACCGTGGCGTTCCA 58.842 50.000 0.00 0.00 40.85 3.53
1560 7566 1.741145 GATTTTACCGTGGCGTTCCAT 59.259 47.619 0.00 0.00 45.62 3.41
1561 7567 0.875728 TTTTACCGTGGCGTTCCATG 59.124 50.000 0.00 0.00 45.62 3.66
1562 7568 0.250381 TTTACCGTGGCGTTCCATGT 60.250 50.000 3.21 0.09 45.86 3.21
1590 7596 6.575267 TCCAAAAAGCTAACAAAAGGTAACC 58.425 36.000 0.00 0.00 37.17 2.85
1600 7606 6.474140 AACAAAAGGTAACCGGATTTTTCT 57.526 33.333 9.46 0.00 37.17 2.52
1647 7653 7.192852 ACATAGACATCCTCAAGAAGTTCAT 57.807 36.000 5.50 0.00 0.00 2.57
1655 7661 7.440556 ACATCCTCAAGAAGTTCATCATAATCG 59.559 37.037 5.50 0.00 0.00 3.34
1680 7686 7.853377 CTGCAATTATCAAAGCAGTATGATG 57.147 36.000 0.00 0.00 46.92 3.07
1693 7699 4.321156 GCAGTATGATGCAAAACCTTGTCA 60.321 41.667 0.00 0.00 45.77 3.58
1702 7708 6.403866 TGCAAAACCTTGTCAATCTGTTAT 57.596 33.333 0.00 0.00 34.79 1.89
1703 7709 6.815089 TGCAAAACCTTGTCAATCTGTTATT 58.185 32.000 0.00 0.00 34.79 1.40
1704 7710 7.946207 TGCAAAACCTTGTCAATCTGTTATTA 58.054 30.769 0.00 0.00 34.79 0.98
1705 7711 8.417106 TGCAAAACCTTGTCAATCTGTTATTAA 58.583 29.630 0.00 0.00 34.79 1.40
1706 7712 9.423061 GCAAAACCTTGTCAATCTGTTATTAAT 57.577 29.630 0.00 0.00 34.79 1.40
1721 7727 9.685828 TCTGTTATTAATTAAAGCAACCAACAC 57.314 29.630 1.21 0.00 0.00 3.32
1722 7728 9.469807 CTGTTATTAATTAAAGCAACCAACACA 57.530 29.630 1.21 0.00 0.00 3.72
1723 7729 9.469807 TGTTATTAATTAAAGCAACCAACACAG 57.530 29.630 1.21 0.00 0.00 3.66
1724 7730 9.685828 GTTATTAATTAAAGCAACCAACACAGA 57.314 29.630 1.21 0.00 0.00 3.41
1725 7731 9.906660 TTATTAATTAAAGCAACCAACACAGAG 57.093 29.630 1.21 0.00 0.00 3.35
1726 7732 4.853924 ATTAAAGCAACCAACACAGAGG 57.146 40.909 0.00 0.00 0.00 3.69
1727 7733 1.402787 AAAGCAACCAACACAGAGGG 58.597 50.000 0.00 0.00 0.00 4.30
1728 7734 1.109323 AAGCAACCAACACAGAGGGC 61.109 55.000 0.00 0.00 0.00 5.19
1729 7735 1.827789 GCAACCAACACAGAGGGCA 60.828 57.895 0.00 0.00 0.00 5.36
1730 7736 2.032981 CAACCAACACAGAGGGCAC 58.967 57.895 0.00 0.00 0.00 5.01
1731 7737 1.525995 AACCAACACAGAGGGCACG 60.526 57.895 0.00 0.00 0.00 5.34
1732 7738 2.111043 CCAACACAGAGGGCACGT 59.889 61.111 0.00 0.00 0.00 4.49
1733 7739 1.525995 CCAACACAGAGGGCACGTT 60.526 57.895 0.00 0.00 0.00 3.99
1734 7740 1.648720 CAACACAGAGGGCACGTTG 59.351 57.895 0.00 0.00 0.00 4.10
1735 7741 1.095228 CAACACAGAGGGCACGTTGT 61.095 55.000 0.00 0.00 33.84 3.32
1736 7742 1.095228 AACACAGAGGGCACGTTGTG 61.095 55.000 19.97 19.97 44.81 3.33
1737 7743 1.227527 CACAGAGGGCACGTTGTGA 60.228 57.895 17.66 0.00 42.61 3.58
1738 7744 0.603707 CACAGAGGGCACGTTGTGAT 60.604 55.000 17.66 0.00 42.61 3.06
1739 7745 0.108585 ACAGAGGGCACGTTGTGATT 59.891 50.000 0.24 0.00 35.23 2.57
1740 7746 0.798776 CAGAGGGCACGTTGTGATTC 59.201 55.000 0.24 0.00 35.23 2.52
1741 7747 0.670546 AGAGGGCACGTTGTGATTCG 60.671 55.000 0.24 0.00 35.23 3.34
1742 7748 2.175811 GGGCACGTTGTGATTCGC 59.824 61.111 0.24 0.00 35.23 4.70
1743 7749 2.612567 GGGCACGTTGTGATTCGCA 61.613 57.895 0.24 0.00 35.23 5.10
1744 7750 1.281353 GGCACGTTGTGATTCGCAA 59.719 52.632 8.54 8.54 35.23 4.85
1745 7751 0.317436 GGCACGTTGTGATTCGCAAA 60.317 50.000 13.89 0.00 35.60 3.68
1746 7752 1.471964 GCACGTTGTGATTCGCAAAA 58.528 45.000 13.89 0.00 35.60 2.44
1747 7753 1.447938 GCACGTTGTGATTCGCAAAAG 59.552 47.619 13.89 13.00 35.60 2.27
1748 7754 1.447938 CACGTTGTGATTCGCAAAAGC 59.552 47.619 13.89 2.14 35.60 3.51
1749 7755 1.064803 ACGTTGTGATTCGCAAAAGCA 59.935 42.857 13.89 0.00 35.60 3.91
1750 7756 1.447938 CGTTGTGATTCGCAAAAGCAC 59.552 47.619 13.89 9.58 35.60 4.40
1751 7757 2.458951 GTTGTGATTCGCAAAAGCACA 58.541 42.857 13.89 13.94 35.60 4.57
1752 7758 2.404265 TGTGATTCGCAAAAGCACAG 57.596 45.000 13.94 0.00 34.85 3.66
1753 7759 1.055338 GTGATTCGCAAAAGCACAGC 58.945 50.000 11.18 0.00 0.00 4.40
1754 7760 0.039256 TGATTCGCAAAAGCACAGCC 60.039 50.000 0.00 0.00 0.00 4.85
1755 7761 0.733909 GATTCGCAAAAGCACAGCCC 60.734 55.000 0.00 0.00 0.00 5.19
1756 7762 2.476534 ATTCGCAAAAGCACAGCCCG 62.477 55.000 0.00 0.00 0.00 6.13
1757 7763 4.705519 CGCAAAAGCACAGCCCGG 62.706 66.667 0.00 0.00 0.00 5.73
1759 7765 4.362476 CAAAAGCACAGCCCGGCC 62.362 66.667 5.55 0.00 0.00 6.13
1760 7766 4.603535 AAAAGCACAGCCCGGCCT 62.604 61.111 5.55 0.00 0.00 5.19
1772 7778 4.111016 CGGCCTGCGTCGTGTAGA 62.111 66.667 0.00 0.00 30.84 2.59
1773 7779 2.260434 GGCCTGCGTCGTGTAGAA 59.740 61.111 0.00 0.00 30.84 2.10
1774 7780 2.092882 GGCCTGCGTCGTGTAGAAC 61.093 63.158 0.00 0.00 30.84 3.01
1775 7781 1.080705 GCCTGCGTCGTGTAGAACT 60.081 57.895 0.00 0.00 30.84 3.01
1776 7782 1.344942 GCCTGCGTCGTGTAGAACTG 61.345 60.000 0.00 0.00 30.84 3.16
1777 7783 0.039437 CCTGCGTCGTGTAGAACTGT 60.039 55.000 0.00 0.00 30.84 3.55
1778 7784 1.602165 CCTGCGTCGTGTAGAACTGTT 60.602 52.381 0.00 0.00 30.84 3.16
1779 7785 1.714460 CTGCGTCGTGTAGAACTGTTC 59.286 52.381 12.54 12.54 30.84 3.18
1780 7786 1.065851 TGCGTCGTGTAGAACTGTTCA 59.934 47.619 21.50 6.02 0.00 3.18
1781 7787 1.450905 GCGTCGTGTAGAACTGTTCAC 59.549 52.381 21.50 16.56 0.00 3.18
1786 7792 3.845683 CGTGTAGAACTGTTCACGTTTG 58.154 45.455 21.50 4.21 45.26 2.93
1787 7793 3.305094 CGTGTAGAACTGTTCACGTTTGT 59.695 43.478 21.50 2.72 45.26 2.83
1788 7794 4.500117 CGTGTAGAACTGTTCACGTTTGTA 59.500 41.667 21.50 1.78 45.26 2.41
1789 7795 5.174398 CGTGTAGAACTGTTCACGTTTGTAT 59.826 40.000 21.50 1.34 45.26 2.29
1790 7796 6.291955 CGTGTAGAACTGTTCACGTTTGTATT 60.292 38.462 21.50 0.65 45.26 1.89
1791 7797 7.061634 GTGTAGAACTGTTCACGTTTGTATTC 58.938 38.462 21.50 0.00 0.00 1.75
1792 7798 6.757478 TGTAGAACTGTTCACGTTTGTATTCA 59.243 34.615 21.50 0.52 0.00 2.57
1793 7799 6.861065 AGAACTGTTCACGTTTGTATTCAT 57.139 33.333 21.50 0.00 0.00 2.57
1794 7800 6.888430 AGAACTGTTCACGTTTGTATTCATC 58.112 36.000 21.50 0.00 0.00 2.92
1795 7801 5.607119 ACTGTTCACGTTTGTATTCATCC 57.393 39.130 0.00 0.00 0.00 3.51
1796 7802 4.151689 ACTGTTCACGTTTGTATTCATCCG 59.848 41.667 0.00 0.00 0.00 4.18
1797 7803 4.308265 TGTTCACGTTTGTATTCATCCGA 58.692 39.130 0.00 0.00 0.00 4.55
1798 7804 4.932799 TGTTCACGTTTGTATTCATCCGAT 59.067 37.500 0.00 0.00 0.00 4.18
1799 7805 6.100668 TGTTCACGTTTGTATTCATCCGATA 58.899 36.000 0.00 0.00 0.00 2.92
1800 7806 6.035220 TGTTCACGTTTGTATTCATCCGATAC 59.965 38.462 0.00 0.00 0.00 2.24
1801 7807 4.736307 TCACGTTTGTATTCATCCGATACG 59.264 41.667 0.00 0.00 0.00 3.06
1815 7821 2.653584 CCGATACGGCGTTATTTAGACG 59.346 50.000 21.24 9.72 45.74 4.18
1816 7822 2.653584 CGATACGGCGTTATTTAGACGG 59.346 50.000 21.24 0.00 44.33 4.79
1817 7823 3.606846 CGATACGGCGTTATTTAGACGGA 60.607 47.826 21.24 0.00 44.33 4.69
1818 7824 1.913317 ACGGCGTTATTTAGACGGAC 58.087 50.000 6.77 0.00 44.33 4.79
1819 7825 1.474077 ACGGCGTTATTTAGACGGACT 59.526 47.619 6.77 0.00 44.33 3.85
1820 7826 2.094545 ACGGCGTTATTTAGACGGACTT 60.095 45.455 6.77 0.00 44.33 3.01
1821 7827 2.280708 CGGCGTTATTTAGACGGACTTG 59.719 50.000 0.00 0.00 40.66 3.16
1822 7828 2.606272 GGCGTTATTTAGACGGACTTGG 59.394 50.000 0.00 0.00 40.66 3.61
1823 7829 2.030091 GCGTTATTTAGACGGACTTGGC 59.970 50.000 0.00 0.00 40.66 4.52
1824 7830 2.606272 CGTTATTTAGACGGACTTGGCC 59.394 50.000 0.00 0.00 36.90 5.36
1825 7831 2.941064 GTTATTTAGACGGACTTGGCCC 59.059 50.000 0.00 0.00 0.00 5.80
1826 7832 0.988832 ATTTAGACGGACTTGGCCCA 59.011 50.000 0.00 0.00 0.00 5.36
1827 7833 0.323629 TTTAGACGGACTTGGCCCAG 59.676 55.000 0.00 0.00 0.00 4.45
1828 7834 2.180159 TTAGACGGACTTGGCCCAGC 62.180 60.000 3.14 0.00 0.00 4.85
1840 7846 2.657297 GCCCAGCCAGAAATTGTGA 58.343 52.632 0.00 0.00 0.00 3.58
1841 7847 0.244721 GCCCAGCCAGAAATTGTGAC 59.755 55.000 0.00 0.00 0.00 3.67
1842 7848 1.915141 CCCAGCCAGAAATTGTGACT 58.085 50.000 0.00 0.00 0.00 3.41
1843 7849 1.542915 CCCAGCCAGAAATTGTGACTG 59.457 52.381 0.00 0.00 0.00 3.51
1844 7850 2.233271 CCAGCCAGAAATTGTGACTGT 58.767 47.619 5.80 0.00 0.00 3.55
1845 7851 2.030540 CCAGCCAGAAATTGTGACTGTG 60.031 50.000 5.80 0.00 0.00 3.66
1846 7852 1.610522 AGCCAGAAATTGTGACTGTGC 59.389 47.619 0.00 0.00 0.00 4.57
1847 7853 1.610522 GCCAGAAATTGTGACTGTGCT 59.389 47.619 0.00 0.00 0.00 4.40
1848 7854 2.606308 GCCAGAAATTGTGACTGTGCTG 60.606 50.000 0.00 0.00 0.00 4.41
1849 7855 2.030540 CCAGAAATTGTGACTGTGCTGG 60.031 50.000 0.00 0.00 36.14 4.85
1850 7856 2.880268 CAGAAATTGTGACTGTGCTGGA 59.120 45.455 0.00 0.00 0.00 3.86
1851 7857 2.880890 AGAAATTGTGACTGTGCTGGAC 59.119 45.455 0.00 0.00 0.00 4.02
1852 7858 1.609208 AATTGTGACTGTGCTGGACC 58.391 50.000 0.00 0.00 0.00 4.46
1853 7859 0.603707 ATTGTGACTGTGCTGGACCG 60.604 55.000 0.00 0.00 0.00 4.79
1854 7860 1.681486 TTGTGACTGTGCTGGACCGA 61.681 55.000 0.00 0.00 0.00 4.69
1855 7861 1.069090 GTGACTGTGCTGGACCGAA 59.931 57.895 0.00 0.00 0.00 4.30
1856 7862 0.320771 GTGACTGTGCTGGACCGAAT 60.321 55.000 0.00 0.00 0.00 3.34
1857 7863 0.320683 TGACTGTGCTGGACCGAATG 60.321 55.000 0.00 0.00 0.00 2.67
1858 7864 1.639298 GACTGTGCTGGACCGAATGC 61.639 60.000 0.00 0.00 0.00 3.56
1859 7865 2.741985 TGTGCTGGACCGAATGCG 60.742 61.111 0.00 0.00 37.24 4.73
1860 7866 2.434185 GTGCTGGACCGAATGCGA 60.434 61.111 0.00 0.00 40.82 5.10
1861 7867 2.125552 TGCTGGACCGAATGCGAG 60.126 61.111 0.00 0.00 40.82 5.03
1862 7868 3.567797 GCTGGACCGAATGCGAGC 61.568 66.667 0.00 0.00 40.82 5.03
1863 7869 2.892425 CTGGACCGAATGCGAGCC 60.892 66.667 0.00 0.00 40.82 4.70
1864 7870 3.664025 CTGGACCGAATGCGAGCCA 62.664 63.158 0.00 0.00 40.82 4.75
1865 7871 3.195698 GGACCGAATGCGAGCCAC 61.196 66.667 0.00 0.00 40.82 5.01
1866 7872 3.554692 GACCGAATGCGAGCCACG 61.555 66.667 0.00 0.00 45.66 4.94
1867 7873 4.373116 ACCGAATGCGAGCCACGT 62.373 61.111 0.00 0.00 44.60 4.49
1868 7874 3.554692 CCGAATGCGAGCCACGTC 61.555 66.667 0.00 0.00 44.60 4.34
1869 7875 2.809174 CGAATGCGAGCCACGTCA 60.809 61.111 0.00 2.59 44.60 4.35
1870 7876 2.792290 CGAATGCGAGCCACGTCAG 61.792 63.158 0.00 0.00 44.60 3.51
1871 7877 2.434884 AATGCGAGCCACGTCAGG 60.435 61.111 0.00 0.00 44.60 3.86
1872 7878 3.240134 AATGCGAGCCACGTCAGGT 62.240 57.895 0.00 0.00 44.60 4.00
1873 7879 3.939837 ATGCGAGCCACGTCAGGTG 62.940 63.158 0.00 0.00 46.57 4.00
1883 7889 4.626081 GTCAGGTGGCGCTGGTGT 62.626 66.667 7.64 0.00 0.00 4.16
1884 7890 3.872603 TCAGGTGGCGCTGGTGTT 61.873 61.111 7.64 0.00 0.00 3.32
1885 7891 3.357079 CAGGTGGCGCTGGTGTTC 61.357 66.667 7.64 0.00 0.00 3.18
1886 7892 3.872603 AGGTGGCGCTGGTGTTCA 61.873 61.111 7.64 0.00 0.00 3.18
1887 7893 3.357079 GGTGGCGCTGGTGTTCAG 61.357 66.667 7.64 0.00 46.03 3.02
1888 7894 2.591715 GTGGCGCTGGTGTTCAGT 60.592 61.111 7.64 0.00 45.08 3.41
1893 7899 2.689083 CGCTGGTGTTCAGTGTTCA 58.311 52.632 0.00 0.00 46.05 3.18
1894 7900 1.013596 CGCTGGTGTTCAGTGTTCAA 58.986 50.000 0.00 0.00 46.05 2.69
1895 7901 1.003545 CGCTGGTGTTCAGTGTTCAAG 60.004 52.381 0.00 0.00 46.05 3.02
1896 7902 1.334869 GCTGGTGTTCAGTGTTCAAGG 59.665 52.381 0.00 0.00 45.08 3.61
1897 7903 1.949525 CTGGTGTTCAGTGTTCAAGGG 59.050 52.381 0.00 0.00 38.64 3.95
1898 7904 0.668535 GGTGTTCAGTGTTCAAGGGC 59.331 55.000 0.00 0.00 0.00 5.19
1899 7905 0.668535 GTGTTCAGTGTTCAAGGGCC 59.331 55.000 0.00 0.00 0.00 5.80
1900 7906 0.550914 TGTTCAGTGTTCAAGGGCCT 59.449 50.000 0.00 0.00 0.00 5.19
1901 7907 1.064017 TGTTCAGTGTTCAAGGGCCTT 60.064 47.619 14.48 14.48 0.00 4.35
1902 7908 1.338020 GTTCAGTGTTCAAGGGCCTTG 59.662 52.381 35.44 35.44 42.25 3.61
1903 7909 0.178992 TCAGTGTTCAAGGGCCTTGG 60.179 55.000 38.45 24.49 41.33 3.61
1904 7910 1.531602 AGTGTTCAAGGGCCTTGGC 60.532 57.895 38.45 30.87 41.33 4.52
1913 7919 3.443045 GGCCTTGGCCACGATGTG 61.443 66.667 24.50 0.00 0.00 3.21
1924 7930 1.511850 CACGATGTGGTCAAGAAGCA 58.488 50.000 0.00 0.00 0.00 3.91
1925 7931 1.462283 CACGATGTGGTCAAGAAGCAG 59.538 52.381 0.00 0.00 35.67 4.24
1926 7932 1.070758 ACGATGTGGTCAAGAAGCAGT 59.929 47.619 0.00 0.00 35.67 4.40
1927 7933 1.462283 CGATGTGGTCAAGAAGCAGTG 59.538 52.381 0.00 0.00 35.67 3.66
1928 7934 2.771089 GATGTGGTCAAGAAGCAGTGA 58.229 47.619 0.00 0.00 35.67 3.41
1929 7935 2.708216 TGTGGTCAAGAAGCAGTGAA 57.292 45.000 0.00 0.00 35.67 3.18
1930 7936 2.288666 TGTGGTCAAGAAGCAGTGAAC 58.711 47.619 0.00 0.00 35.67 3.18
1931 7937 1.604278 GTGGTCAAGAAGCAGTGAACC 59.396 52.381 0.00 0.00 35.67 3.62
1932 7938 1.490490 TGGTCAAGAAGCAGTGAACCT 59.510 47.619 0.00 0.00 29.93 3.50
1933 7939 2.703536 TGGTCAAGAAGCAGTGAACCTA 59.296 45.455 0.00 0.00 29.93 3.08
1934 7940 3.067833 GGTCAAGAAGCAGTGAACCTAC 58.932 50.000 0.00 0.00 0.00 3.18
1935 7941 3.494398 GGTCAAGAAGCAGTGAACCTACA 60.494 47.826 0.00 0.00 0.00 2.74
1936 7942 4.319177 GTCAAGAAGCAGTGAACCTACAT 58.681 43.478 0.00 0.00 0.00 2.29
1937 7943 5.479306 GTCAAGAAGCAGTGAACCTACATA 58.521 41.667 0.00 0.00 0.00 2.29
1938 7944 6.109359 GTCAAGAAGCAGTGAACCTACATAT 58.891 40.000 0.00 0.00 0.00 1.78
1939 7945 6.036517 GTCAAGAAGCAGTGAACCTACATATG 59.963 42.308 0.00 0.00 0.00 1.78
1940 7946 5.683876 AGAAGCAGTGAACCTACATATGT 57.316 39.130 13.93 13.93 0.00 2.29
1941 7947 6.791867 AGAAGCAGTGAACCTACATATGTA 57.208 37.500 14.75 14.75 0.00 2.29
1942 7948 7.366847 AGAAGCAGTGAACCTACATATGTAT 57.633 36.000 15.81 1.55 0.00 2.29
1943 7949 8.478775 AGAAGCAGTGAACCTACATATGTATA 57.521 34.615 15.81 0.00 0.00 1.47
1944 7950 8.924303 AGAAGCAGTGAACCTACATATGTATAA 58.076 33.333 15.81 0.00 0.00 0.98
1945 7951 9.542462 GAAGCAGTGAACCTACATATGTATAAA 57.458 33.333 15.81 0.00 0.00 1.40
1946 7952 9.547753 AAGCAGTGAACCTACATATGTATAAAG 57.452 33.333 15.81 6.23 0.00 1.85
1947 7953 8.705594 AGCAGTGAACCTACATATGTATAAAGT 58.294 33.333 15.81 8.66 0.00 2.66
1948 7954 9.976511 GCAGTGAACCTACATATGTATAAAGTA 57.023 33.333 15.81 0.00 0.00 2.24
1963 7969 8.836268 TGTATAAAGTAAGTACAACCCACAAG 57.164 34.615 0.00 0.00 0.00 3.16
1964 7970 8.649591 TGTATAAAGTAAGTACAACCCACAAGA 58.350 33.333 0.00 0.00 0.00 3.02
1965 7971 9.148104 GTATAAAGTAAGTACAACCCACAAGAG 57.852 37.037 0.00 0.00 0.00 2.85
1966 7972 4.618920 AGTAAGTACAACCCACAAGAGG 57.381 45.455 0.00 0.00 0.00 3.69
1967 7973 4.228824 AGTAAGTACAACCCACAAGAGGA 58.771 43.478 0.00 0.00 0.00 3.71
1968 7974 4.844655 AGTAAGTACAACCCACAAGAGGAT 59.155 41.667 0.00 0.00 0.00 3.24
1969 7975 6.021030 AGTAAGTACAACCCACAAGAGGATA 58.979 40.000 0.00 0.00 0.00 2.59
1970 7976 5.422214 AAGTACAACCCACAAGAGGATAG 57.578 43.478 0.00 0.00 0.00 2.08
1971 7977 4.426704 AGTACAACCCACAAGAGGATAGT 58.573 43.478 0.00 0.00 0.00 2.12
1972 7978 3.703001 ACAACCCACAAGAGGATAGTG 57.297 47.619 0.00 0.00 0.00 2.74
1976 7982 2.029838 CCACAAGAGGATAGTGGCAC 57.970 55.000 10.29 10.29 45.39 5.01
1977 7983 1.278985 CCACAAGAGGATAGTGGCACA 59.721 52.381 21.41 6.31 45.39 4.57
1978 7984 2.625737 CACAAGAGGATAGTGGCACAG 58.374 52.381 21.41 0.48 41.80 3.66
1979 7985 2.234661 CACAAGAGGATAGTGGCACAGA 59.765 50.000 21.41 7.62 41.80 3.41
1980 7986 2.234908 ACAAGAGGATAGTGGCACAGAC 59.765 50.000 21.41 9.69 41.80 3.51
1981 7987 2.234661 CAAGAGGATAGTGGCACAGACA 59.765 50.000 21.41 1.88 41.80 3.41
1982 7988 2.106566 AGAGGATAGTGGCACAGACAG 58.893 52.381 21.41 0.00 41.80 3.51
1983 7989 1.137872 GAGGATAGTGGCACAGACAGG 59.862 57.143 21.41 0.00 41.80 4.00
1984 7990 0.905357 GGATAGTGGCACAGACAGGT 59.095 55.000 21.41 0.00 41.80 4.00
1985 7991 1.134670 GGATAGTGGCACAGACAGGTC 60.135 57.143 21.41 6.40 41.80 3.85
1986 7992 0.532573 ATAGTGGCACAGACAGGTCG 59.467 55.000 21.41 0.00 41.80 4.79
1987 7993 1.532604 TAGTGGCACAGACAGGTCGG 61.533 60.000 21.41 0.00 41.80 4.79
1988 7994 3.625897 TGGCACAGACAGGTCGGG 61.626 66.667 4.67 0.00 34.09 5.14
1989 7995 3.626924 GGCACAGACAGGTCGGGT 61.627 66.667 4.67 0.00 34.09 5.28
1990 7996 2.357517 GCACAGACAGGTCGGGTG 60.358 66.667 17.29 17.29 40.34 4.61
1991 7997 2.357517 CACAGACAGGTCGGGTGC 60.358 66.667 12.10 0.00 34.73 5.01
1992 7998 2.524394 ACAGACAGGTCGGGTGCT 60.524 61.111 4.67 0.00 34.09 4.40
1993 7999 1.228769 ACAGACAGGTCGGGTGCTA 60.229 57.895 4.67 0.00 34.09 3.49
1994 8000 0.830444 ACAGACAGGTCGGGTGCTAA 60.830 55.000 4.67 0.00 34.09 3.09
1995 8001 0.537188 CAGACAGGTCGGGTGCTAAT 59.463 55.000 0.00 0.00 34.09 1.73
1996 8002 0.537188 AGACAGGTCGGGTGCTAATG 59.463 55.000 0.00 0.00 34.09 1.90
1997 8003 0.462047 GACAGGTCGGGTGCTAATGG 60.462 60.000 0.00 0.00 0.00 3.16
1998 8004 1.153168 CAGGTCGGGTGCTAATGGG 60.153 63.158 0.00 0.00 0.00 4.00
1999 8005 1.306654 AGGTCGGGTGCTAATGGGA 60.307 57.895 0.00 0.00 0.00 4.37
2000 8006 1.153229 GGTCGGGTGCTAATGGGAC 60.153 63.158 0.00 0.00 35.44 4.46
2025 8031 2.325583 TTTTAGGACATGGCTAGCGG 57.674 50.000 9.00 3.28 0.00 5.52
2026 8032 0.468226 TTTAGGACATGGCTAGCGGG 59.532 55.000 9.00 2.89 0.00 6.13
2027 8033 2.040009 TTAGGACATGGCTAGCGGGC 62.040 60.000 9.00 2.55 41.27 6.13
2055 8061 4.296265 CCGTTGGTGGGAACTAGC 57.704 61.111 0.00 0.00 0.00 3.42
2056 8062 1.740296 CCGTTGGTGGGAACTAGCG 60.740 63.158 0.00 0.00 0.00 4.26
2057 8063 2.388232 CGTTGGTGGGAACTAGCGC 61.388 63.158 0.00 0.00 0.00 5.92
2058 8064 1.003718 GTTGGTGGGAACTAGCGCT 60.004 57.895 17.26 17.26 0.00 5.92
2059 8065 1.019805 GTTGGTGGGAACTAGCGCTC 61.020 60.000 16.34 0.00 0.00 5.03
2060 8066 2.202756 GGTGGGAACTAGCGCTCG 60.203 66.667 16.34 11.32 0.00 5.03
2061 8067 2.572284 GTGGGAACTAGCGCTCGT 59.428 61.111 16.34 12.22 0.00 4.18
2062 8068 1.516603 GTGGGAACTAGCGCTCGTC 60.517 63.158 16.34 10.00 0.00 4.20
2063 8069 2.104530 GGGAACTAGCGCTCGTCC 59.895 66.667 16.34 19.03 0.00 4.79
2064 8070 2.707849 GGGAACTAGCGCTCGTCCA 61.708 63.158 26.32 6.48 0.00 4.02
2065 8071 1.214589 GGAACTAGCGCTCGTCCAA 59.785 57.895 16.34 0.00 0.00 3.53
2066 8072 0.389426 GGAACTAGCGCTCGTCCAAA 60.389 55.000 16.34 0.00 0.00 3.28
2067 8073 1.641577 GAACTAGCGCTCGTCCAAAT 58.358 50.000 16.34 0.00 0.00 2.32
2068 8074 2.480759 GGAACTAGCGCTCGTCCAAATA 60.481 50.000 16.34 0.00 0.00 1.40
2069 8075 2.953466 ACTAGCGCTCGTCCAAATAA 57.047 45.000 16.34 0.00 0.00 1.40
2070 8076 2.810650 ACTAGCGCTCGTCCAAATAAG 58.189 47.619 16.34 3.63 0.00 1.73
2071 8077 2.426024 ACTAGCGCTCGTCCAAATAAGA 59.574 45.455 16.34 0.00 0.00 2.10
2072 8078 2.380084 AGCGCTCGTCCAAATAAGAA 57.620 45.000 2.64 0.00 0.00 2.52
2073 8079 2.695359 AGCGCTCGTCCAAATAAGAAA 58.305 42.857 2.64 0.00 0.00 2.52
2074 8080 3.071479 AGCGCTCGTCCAAATAAGAAAA 58.929 40.909 2.64 0.00 0.00 2.29
2075 8081 3.500680 AGCGCTCGTCCAAATAAGAAAAA 59.499 39.130 2.64 0.00 0.00 1.94
2089 8095 2.331451 AAAAAGCAGCCGACGTGC 59.669 55.556 0.00 2.42 41.54 5.34
2090 8096 2.477176 AAAAAGCAGCCGACGTGCA 61.477 52.632 12.30 0.00 43.82 4.57
2091 8097 2.662091 AAAAAGCAGCCGACGTGCAC 62.662 55.000 6.82 6.82 43.82 4.57
2099 8105 3.756677 CGACGTGCACGACAGCAG 61.757 66.667 42.94 21.14 46.69 4.24
2100 8106 2.658593 GACGTGCACGACAGCAGT 60.659 61.111 42.94 21.06 46.69 4.40
2101 8107 2.202878 ACGTGCACGACAGCAGTT 60.203 55.556 42.94 17.58 46.69 3.16
2102 8108 2.147204 GACGTGCACGACAGCAGTTC 62.147 60.000 42.94 24.15 46.69 3.01
2103 8109 2.237066 CGTGCACGACAGCAGTTCA 61.237 57.895 34.93 0.00 46.69 3.18
2104 8110 1.276844 GTGCACGACAGCAGTTCAC 59.723 57.895 0.00 0.00 46.69 3.18
2105 8111 1.143838 TGCACGACAGCAGTTCACT 59.856 52.632 0.00 0.00 40.11 3.41
2106 8112 0.387565 TGCACGACAGCAGTTCACTA 59.612 50.000 0.00 0.00 40.11 2.74
2107 8113 1.202475 TGCACGACAGCAGTTCACTAA 60.202 47.619 0.00 0.00 40.11 2.24
2108 8114 1.864711 GCACGACAGCAGTTCACTAAA 59.135 47.619 0.00 0.00 0.00 1.85
2109 8115 2.286833 GCACGACAGCAGTTCACTAAAA 59.713 45.455 0.00 0.00 0.00 1.52
2110 8116 3.242608 GCACGACAGCAGTTCACTAAAAA 60.243 43.478 0.00 0.00 0.00 1.94
2131 8137 2.202866 AGGAATCATGTCCTCGCGT 58.797 52.632 5.77 0.00 45.40 6.01
2132 8138 0.179100 AGGAATCATGTCCTCGCGTG 60.179 55.000 5.77 2.75 45.40 5.34
2133 8139 1.638467 GAATCATGTCCTCGCGTGC 59.362 57.895 5.77 0.00 0.00 5.34
2134 8140 1.079197 AATCATGTCCTCGCGTGCA 60.079 52.632 5.77 0.00 0.00 4.57
2135 8141 0.462581 AATCATGTCCTCGCGTGCAT 60.463 50.000 5.77 0.28 0.00 3.96
2136 8142 0.462581 ATCATGTCCTCGCGTGCATT 60.463 50.000 5.77 0.00 0.00 3.56
2137 8143 0.673333 TCATGTCCTCGCGTGCATTT 60.673 50.000 5.77 0.00 0.00 2.32
2138 8144 1.006086 CATGTCCTCGCGTGCATTTA 58.994 50.000 5.77 0.00 0.00 1.40
2139 8145 1.599071 CATGTCCTCGCGTGCATTTAT 59.401 47.619 5.77 0.00 0.00 1.40
2140 8146 1.732941 TGTCCTCGCGTGCATTTATT 58.267 45.000 5.77 0.00 0.00 1.40
2141 8147 2.080693 TGTCCTCGCGTGCATTTATTT 58.919 42.857 5.77 0.00 0.00 1.40
2142 8148 2.159585 TGTCCTCGCGTGCATTTATTTG 60.160 45.455 5.77 0.00 0.00 2.32
2143 8149 2.080693 TCCTCGCGTGCATTTATTTGT 58.919 42.857 5.77 0.00 0.00 2.83
2144 8150 2.159585 TCCTCGCGTGCATTTATTTGTG 60.160 45.455 5.77 0.00 0.00 3.33
2145 8151 2.176369 CTCGCGTGCATTTATTTGTGG 58.824 47.619 5.77 0.00 0.00 4.17
2146 8152 1.807142 TCGCGTGCATTTATTTGTGGA 59.193 42.857 5.77 0.00 0.00 4.02
2147 8153 2.421775 TCGCGTGCATTTATTTGTGGAT 59.578 40.909 5.77 0.00 0.00 3.41
2148 8154 3.119673 TCGCGTGCATTTATTTGTGGATT 60.120 39.130 5.77 0.00 0.00 3.01
2149 8155 3.240401 CGCGTGCATTTATTTGTGGATTC 59.760 43.478 0.00 0.00 0.00 2.52
2150 8156 4.172505 GCGTGCATTTATTTGTGGATTCA 58.827 39.130 0.00 0.00 0.00 2.57
2151 8157 4.624882 GCGTGCATTTATTTGTGGATTCAA 59.375 37.500 0.00 0.00 0.00 2.69
2152 8158 5.119898 GCGTGCATTTATTTGTGGATTCAAA 59.880 36.000 0.00 0.00 40.74 2.69
2153 8159 6.347240 GCGTGCATTTATTTGTGGATTCAAAA 60.347 34.615 0.00 0.00 40.05 2.44
2154 8160 7.571026 CGTGCATTTATTTGTGGATTCAAAAA 58.429 30.769 0.00 0.00 40.05 1.94
2155 8161 7.741216 CGTGCATTTATTTGTGGATTCAAAAAG 59.259 33.333 0.00 0.00 40.05 2.27
2156 8162 8.558700 GTGCATTTATTTGTGGATTCAAAAAGT 58.441 29.630 0.00 0.00 40.05 2.66
2157 8163 9.118300 TGCATTTATTTGTGGATTCAAAAAGTT 57.882 25.926 0.00 0.00 40.05 2.66
2158 8164 9.949174 GCATTTATTTGTGGATTCAAAAAGTTT 57.051 25.926 0.00 0.00 40.05 2.66
2195 8201 8.378172 ACTTCTGATTTAAGTGTCGAAATTCA 57.622 30.769 0.00 0.00 35.87 2.57
2196 8202 8.836413 ACTTCTGATTTAAGTGTCGAAATTCAA 58.164 29.630 0.00 0.00 35.87 2.69
2197 8203 9.831737 CTTCTGATTTAAGTGTCGAAATTCAAT 57.168 29.630 0.00 0.00 0.00 2.57
2207 8213 8.472683 AGTGTCGAAATTCAATTTTGTTTTCA 57.527 26.923 9.54 3.95 35.57 2.69
2208 8214 8.379902 AGTGTCGAAATTCAATTTTGTTTTCAC 58.620 29.630 9.54 12.82 35.57 3.18
2209 8215 8.165428 GTGTCGAAATTCAATTTTGTTTTCACA 58.835 29.630 9.54 4.28 35.57 3.58
2210 8216 8.379161 TGTCGAAATTCAATTTTGTTTTCACAG 58.621 29.630 9.54 5.94 35.57 3.66
2211 8217 8.379902 GTCGAAATTCAATTTTGTTTTCACAGT 58.620 29.630 9.54 0.00 35.57 3.55
2212 8218 8.930760 TCGAAATTCAATTTTGTTTTCACAGTT 58.069 25.926 9.54 0.00 35.57 3.16
2213 8219 8.987729 CGAAATTCAATTTTGTTTTCACAGTTG 58.012 29.630 0.00 0.00 34.33 3.16
2214 8220 9.276397 GAAATTCAATTTTGTTTTCACAGTTGG 57.724 29.630 0.00 0.00 34.57 3.77
2215 8221 5.793026 TCAATTTTGTTTTCACAGTTGGC 57.207 34.783 0.00 0.00 33.22 4.52
2216 8222 5.486526 TCAATTTTGTTTTCACAGTTGGCT 58.513 33.333 0.00 0.00 33.22 4.75
2217 8223 5.936956 TCAATTTTGTTTTCACAGTTGGCTT 59.063 32.000 0.00 0.00 33.22 4.35
2218 8224 6.429385 TCAATTTTGTTTTCACAGTTGGCTTT 59.571 30.769 0.00 0.00 33.22 3.51
2219 8225 5.854431 TTTTGTTTTCACAGTTGGCTTTC 57.146 34.783 0.00 0.00 33.22 2.62
2220 8226 4.799564 TTGTTTTCACAGTTGGCTTTCT 57.200 36.364 0.00 0.00 33.22 2.52
2221 8227 4.370364 TGTTTTCACAGTTGGCTTTCTC 57.630 40.909 0.00 0.00 0.00 2.87
2222 8228 3.181501 TGTTTTCACAGTTGGCTTTCTCG 60.182 43.478 0.00 0.00 0.00 4.04
2223 8229 0.944386 TTCACAGTTGGCTTTCTCGC 59.056 50.000 0.00 0.00 0.00 5.03
2224 8230 1.205064 CACAGTTGGCTTTCTCGCG 59.795 57.895 0.00 0.00 0.00 5.87
2225 8231 1.069090 ACAGTTGGCTTTCTCGCGA 59.931 52.632 9.26 9.26 0.00 5.87
2226 8232 1.222115 ACAGTTGGCTTTCTCGCGAC 61.222 55.000 3.71 0.00 0.00 5.19
2227 8233 2.022129 AGTTGGCTTTCTCGCGACG 61.022 57.895 3.71 1.32 0.00 5.12
2228 8234 2.019951 GTTGGCTTTCTCGCGACGA 61.020 57.895 3.71 4.19 0.00 4.20
2268 8274 9.913310 AGATCTCATATAGATAGGTTTCATCGA 57.087 33.333 0.00 0.00 45.35 3.59
2271 8277 9.521841 TCTCATATAGATAGGTTTCATCGAACT 57.478 33.333 0.00 0.00 0.00 3.01
2326 8332 6.258899 GGCAACTTTAGTGCTATAGAAAAGC 58.741 40.000 3.21 0.00 40.50 3.51
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
32 33 7.375106 TGCCGTTTTATTTTAAGATCGGTTA 57.625 32.000 0.00 0.00 39.07 2.85
47 48 0.249953 TGCGAGAGGTTGCCGTTTTA 60.250 50.000 0.00 0.00 31.01 1.52
63 64 2.662006 TCTTCCAGATCTCAACTGCG 57.338 50.000 0.00 0.00 34.47 5.18
86 87 8.869109 TCACCTTTTCATCCTTGATAAAAACAT 58.131 29.630 0.00 0.00 0.00 2.71
127 128 7.291416 TGGATACCTAAGATACTAACCAATGCA 59.709 37.037 0.00 0.00 0.00 3.96
208 212 4.704965 AGGTGCTAATTTTCGTATCTCCC 58.295 43.478 0.00 0.00 0.00 4.30
274 283 4.142600 GCACAAGTATGTTGGTCCTCATTC 60.143 45.833 5.68 2.22 37.82 2.67
291 304 7.263100 TGAATATTGCTTAGGTATGCACAAG 57.737 36.000 0.00 0.00 39.05 3.16
336 349 9.062524 GGTGGTTCATTAATGCAGTATATACAA 57.937 33.333 15.18 0.01 0.00 2.41
339 352 7.601130 GTCGGTGGTTCATTAATGCAGTATATA 59.399 37.037 10.76 0.00 0.00 0.86
340 353 6.426937 GTCGGTGGTTCATTAATGCAGTATAT 59.573 38.462 10.76 0.00 0.00 0.86
352 365 1.073125 TGGATGTGTCGGTGGTTCATT 59.927 47.619 0.00 0.00 0.00 2.57
363 376 1.203052 CATTGCTTGGGTGGATGTGTC 59.797 52.381 0.00 0.00 0.00 3.67
372 385 1.677576 CATCGTATGCATTGCTTGGGT 59.322 47.619 3.54 0.00 0.00 4.51
374 387 3.696281 TTCATCGTATGCATTGCTTGG 57.304 42.857 3.54 1.19 0.00 3.61
382 395 9.971744 CGAAATGATTTATATTCATCGTATGCA 57.028 29.630 0.00 0.00 32.72 3.96
398 412 6.976925 GCTTGATGAGGATTTCGAAATGATTT 59.023 34.615 27.27 9.94 0.00 2.17
399 413 6.320672 AGCTTGATGAGGATTTCGAAATGATT 59.679 34.615 27.27 12.32 0.00 2.57
416 430 2.756840 TCTCCTGACACAGCTTGATG 57.243 50.000 3.37 0.00 0.00 3.07
458 501 9.529325 GTGTACACTTAATGCAGAGATATGTAA 57.471 33.333 18.92 0.00 0.00 2.41
504 547 1.164411 TGCAAGTATCCAGTTTGGCG 58.836 50.000 0.00 0.00 37.47 5.69
512 555 3.438781 GGTTTCGTGAATGCAAGTATCCA 59.561 43.478 0.00 0.00 0.00 3.41
513 556 3.181500 GGGTTTCGTGAATGCAAGTATCC 60.181 47.826 0.00 0.00 0.00 2.59
514 557 3.181500 GGGGTTTCGTGAATGCAAGTATC 60.181 47.826 0.00 0.00 0.00 2.24
515 558 2.752903 GGGGTTTCGTGAATGCAAGTAT 59.247 45.455 0.00 0.00 0.00 2.12
516 559 2.156098 GGGGTTTCGTGAATGCAAGTA 58.844 47.619 0.00 0.00 0.00 2.24
517 560 0.958822 GGGGTTTCGTGAATGCAAGT 59.041 50.000 0.00 0.00 0.00 3.16
518 561 0.243636 GGGGGTTTCGTGAATGCAAG 59.756 55.000 0.00 0.00 0.00 4.01
519 562 0.468214 TGGGGGTTTCGTGAATGCAA 60.468 50.000 0.00 0.00 0.00 4.08
520 563 1.151679 TGGGGGTTTCGTGAATGCA 59.848 52.632 0.00 0.00 0.00 3.96
521 564 0.893727 AGTGGGGGTTTCGTGAATGC 60.894 55.000 0.00 0.00 0.00 3.56
522 565 0.881118 CAGTGGGGGTTTCGTGAATG 59.119 55.000 0.00 0.00 0.00 2.67
523 566 0.893727 GCAGTGGGGGTTTCGTGAAT 60.894 55.000 0.00 0.00 0.00 2.57
524 567 1.527380 GCAGTGGGGGTTTCGTGAA 60.527 57.895 0.00 0.00 0.00 3.18
525 568 2.112297 GCAGTGGGGGTTTCGTGA 59.888 61.111 0.00 0.00 0.00 4.35
526 569 2.983592 GGCAGTGGGGGTTTCGTG 60.984 66.667 0.00 0.00 0.00 4.35
527 570 3.175710 AGGCAGTGGGGGTTTCGT 61.176 61.111 0.00 0.00 0.00 3.85
528 571 2.672996 CAGGCAGTGGGGGTTTCG 60.673 66.667 0.00 0.00 0.00 3.46
529 572 1.152830 TTCAGGCAGTGGGGGTTTC 59.847 57.895 0.00 0.00 0.00 2.78
530 573 1.152546 GTTCAGGCAGTGGGGGTTT 60.153 57.895 0.00 0.00 0.00 3.27
531 574 2.084930 AGTTCAGGCAGTGGGGGTT 61.085 57.895 0.00 0.00 0.00 4.11
532 575 2.450502 AGTTCAGGCAGTGGGGGT 60.451 61.111 0.00 0.00 0.00 4.95
533 576 1.488705 TACAGTTCAGGCAGTGGGGG 61.489 60.000 0.00 0.00 0.00 5.40
534 577 0.620556 ATACAGTTCAGGCAGTGGGG 59.379 55.000 0.00 0.00 0.00 4.96
535 578 3.627395 TTATACAGTTCAGGCAGTGGG 57.373 47.619 0.00 0.00 0.00 4.61
536 579 5.527582 GGTATTTATACAGTTCAGGCAGTGG 59.472 44.000 2.61 0.00 34.98 4.00
537 580 6.349300 AGGTATTTATACAGTTCAGGCAGTG 58.651 40.000 2.61 0.00 34.98 3.66
538 581 6.561519 AGGTATTTATACAGTTCAGGCAGT 57.438 37.500 2.61 0.00 34.98 4.40
539 582 7.118390 GCATAGGTATTTATACAGTTCAGGCAG 59.882 40.741 2.61 0.00 34.98 4.85
540 583 6.934645 GCATAGGTATTTATACAGTTCAGGCA 59.065 38.462 2.61 0.00 34.98 4.75
541 584 6.934645 TGCATAGGTATTTATACAGTTCAGGC 59.065 38.462 2.61 0.00 34.98 4.85
565 643 4.763793 GGTTGGATGGATTGAGGTGATATG 59.236 45.833 0.00 0.00 0.00 1.78
608 4798 4.202264 ACAAATGGATAGAGACCGATGACC 60.202 45.833 0.00 0.00 0.00 4.02
630 4823 2.665603 GCTGAGAGTGGTGGGGAC 59.334 66.667 0.00 0.00 0.00 4.46
730 4923 0.887933 GCGATGGCCAAGGAAAGAAA 59.112 50.000 10.96 0.00 0.00 2.52
740 4933 3.381333 CTCTGAGCAGCGATGGCCA 62.381 63.158 8.56 8.56 41.24 5.36
781 4974 0.877071 ATGAAGTCAGTTGGCTTGCG 59.123 50.000 3.33 0.00 40.54 4.85
782 4975 1.068055 CCATGAAGTCAGTTGGCTTGC 60.068 52.381 3.33 0.00 40.54 4.01
822 5018 1.201429 AGCCCTTGGACCAGTTCGAT 61.201 55.000 0.00 0.00 0.00 3.59
846 5042 3.256631 GGGTCACGTAGTTCTAACCTTGA 59.743 47.826 0.00 0.00 41.61 3.02
847 5043 3.582780 GGGTCACGTAGTTCTAACCTTG 58.417 50.000 0.00 0.00 41.61 3.61
855 5051 0.533951 ATTCCGGGGTCACGTAGTTC 59.466 55.000 0.00 0.00 41.61 3.01
885 5081 1.592223 GTTGTCGGAGAGGAGGGTG 59.408 63.158 0.00 0.00 36.95 4.61
1043 5239 2.495270 TCCAGCTCACAGATTCTGAGAC 59.505 50.000 20.33 11.66 37.90 3.36
1084 5280 1.618640 GCGTCGCAGAAGTTCAGGAC 61.619 60.000 13.44 8.05 39.69 3.85
1142 5338 3.110178 GCCCGTCGTTGTCTTCGG 61.110 66.667 0.00 0.00 42.22 4.30
1257 5456 0.036388 GGTCATCGCCTTCCTTGACA 60.036 55.000 4.52 0.00 40.14 3.58
1275 5474 3.577415 TGAGATCCATCAGCATCTGTAGG 59.423 47.826 0.00 0.00 32.61 3.18
1489 7495 1.433879 TGGAACGCCACGGTTTTTG 59.566 52.632 0.00 0.00 39.92 2.44
1511 7517 6.186420 ACCTTATGTTGGCTTTTTGGATTT 57.814 33.333 0.00 0.00 0.00 2.17
1512 7518 5.823861 ACCTTATGTTGGCTTTTTGGATT 57.176 34.783 0.00 0.00 0.00 3.01
1513 7519 6.268847 TGTTACCTTATGTTGGCTTTTTGGAT 59.731 34.615 0.00 0.00 0.00 3.41
1514 7520 5.598830 TGTTACCTTATGTTGGCTTTTTGGA 59.401 36.000 0.00 0.00 0.00 3.53
1515 7521 5.848406 TGTTACCTTATGTTGGCTTTTTGG 58.152 37.500 0.00 0.00 0.00 3.28
1516 7522 7.151308 TCATGTTACCTTATGTTGGCTTTTTG 58.849 34.615 0.00 0.00 0.00 2.44
1517 7523 7.296628 TCATGTTACCTTATGTTGGCTTTTT 57.703 32.000 0.00 0.00 0.00 1.94
1518 7524 6.909550 TCATGTTACCTTATGTTGGCTTTT 57.090 33.333 0.00 0.00 0.00 2.27
1519 7525 7.480760 AATCATGTTACCTTATGTTGGCTTT 57.519 32.000 0.00 0.00 0.00 3.51
1520 7526 7.480760 AAATCATGTTACCTTATGTTGGCTT 57.519 32.000 0.00 0.00 0.00 4.35
1521 7527 7.480760 AAAATCATGTTACCTTATGTTGGCT 57.519 32.000 0.00 0.00 0.00 4.75
1522 7528 7.704899 GGTAAAATCATGTTACCTTATGTTGGC 59.295 37.037 9.35 0.00 44.80 4.52
1523 7529 7.913297 CGGTAAAATCATGTTACCTTATGTTGG 59.087 37.037 14.01 0.00 45.65 3.77
1524 7530 8.455682 ACGGTAAAATCATGTTACCTTATGTTG 58.544 33.333 14.01 0.63 45.65 3.33
1525 7531 8.455682 CACGGTAAAATCATGTTACCTTATGTT 58.544 33.333 14.01 0.00 45.65 2.71
1526 7532 7.066525 CCACGGTAAAATCATGTTACCTTATGT 59.933 37.037 14.01 2.81 45.65 2.29
1527 7533 7.414436 CCACGGTAAAATCATGTTACCTTATG 58.586 38.462 14.01 9.46 45.65 1.90
1528 7534 6.038936 GCCACGGTAAAATCATGTTACCTTAT 59.961 38.462 14.01 0.00 45.65 1.73
1529 7535 5.354792 GCCACGGTAAAATCATGTTACCTTA 59.645 40.000 14.01 0.00 45.65 2.69
1530 7536 4.157105 GCCACGGTAAAATCATGTTACCTT 59.843 41.667 14.01 2.73 45.65 3.50
1531 7537 3.692593 GCCACGGTAAAATCATGTTACCT 59.307 43.478 14.01 0.10 45.65 3.08
1532 7538 3.486209 CGCCACGGTAAAATCATGTTACC 60.486 47.826 6.68 6.68 44.78 2.85
1533 7539 3.125658 ACGCCACGGTAAAATCATGTTAC 59.874 43.478 0.00 0.00 0.00 2.50
1534 7540 3.336468 ACGCCACGGTAAAATCATGTTA 58.664 40.909 0.00 0.00 0.00 2.41
1535 7541 2.156098 ACGCCACGGTAAAATCATGTT 58.844 42.857 0.00 0.00 0.00 2.71
1536 7542 1.816074 ACGCCACGGTAAAATCATGT 58.184 45.000 0.00 0.00 0.00 3.21
1537 7543 2.477189 GGAACGCCACGGTAAAATCATG 60.477 50.000 0.00 0.00 0.00 3.07
1538 7544 1.741145 GGAACGCCACGGTAAAATCAT 59.259 47.619 0.00 0.00 0.00 2.45
1539 7545 1.158434 GGAACGCCACGGTAAAATCA 58.842 50.000 0.00 0.00 0.00 2.57
1540 7546 1.158434 TGGAACGCCACGGTAAAATC 58.842 50.000 0.00 0.00 39.92 2.17
1541 7547 3.325902 TGGAACGCCACGGTAAAAT 57.674 47.368 0.00 0.00 39.92 1.82
1542 7548 4.872357 TGGAACGCCACGGTAAAA 57.128 50.000 0.00 0.00 39.92 1.52
1551 7557 3.859411 TTTGGATTTACATGGAACGCC 57.141 42.857 0.00 0.00 0.00 5.68
1552 7558 4.091365 GCTTTTTGGATTTACATGGAACGC 59.909 41.667 0.00 0.00 0.00 4.84
1553 7559 5.469479 AGCTTTTTGGATTTACATGGAACG 58.531 37.500 0.00 0.00 0.00 3.95
1554 7560 7.870445 TGTTAGCTTTTTGGATTTACATGGAAC 59.130 33.333 0.00 0.00 0.00 3.62
1555 7561 7.957002 TGTTAGCTTTTTGGATTTACATGGAA 58.043 30.769 0.00 0.00 0.00 3.53
1556 7562 7.531857 TGTTAGCTTTTTGGATTTACATGGA 57.468 32.000 0.00 0.00 0.00 3.41
1557 7563 8.600449 TTTGTTAGCTTTTTGGATTTACATGG 57.400 30.769 0.00 0.00 0.00 3.66
1559 7565 9.271828 CCTTTTGTTAGCTTTTTGGATTTACAT 57.728 29.630 0.00 0.00 0.00 2.29
1560 7566 8.261522 ACCTTTTGTTAGCTTTTTGGATTTACA 58.738 29.630 0.00 0.00 0.00 2.41
1561 7567 8.657074 ACCTTTTGTTAGCTTTTTGGATTTAC 57.343 30.769 0.00 0.00 0.00 2.01
1590 7596 9.624697 TGTCTGAAATCATTAAAGAAAAATCCG 57.375 29.630 0.00 0.00 0.00 4.18
1600 7606 8.231692 TGTTCCAGTTGTCTGAAATCATTAAA 57.768 30.769 0.00 0.00 43.76 1.52
1647 7653 6.144854 GCTTTGATAATTGCAGCGATTATGA 58.855 36.000 26.61 18.54 32.43 2.15
1679 7685 4.734398 AACAGATTGACAAGGTTTTGCA 57.266 36.364 0.00 0.00 37.85 4.08
1680 7686 8.810652 TTAATAACAGATTGACAAGGTTTTGC 57.189 30.769 7.65 0.00 37.85 3.68
1702 7708 6.239176 CCCTCTGTGTTGGTTGCTTTAATTAA 60.239 38.462 0.00 0.00 0.00 1.40
1703 7709 5.242838 CCCTCTGTGTTGGTTGCTTTAATTA 59.757 40.000 0.00 0.00 0.00 1.40
1704 7710 4.039124 CCCTCTGTGTTGGTTGCTTTAATT 59.961 41.667 0.00 0.00 0.00 1.40
1705 7711 3.573967 CCCTCTGTGTTGGTTGCTTTAAT 59.426 43.478 0.00 0.00 0.00 1.40
1706 7712 2.955660 CCCTCTGTGTTGGTTGCTTTAA 59.044 45.455 0.00 0.00 0.00 1.52
1707 7713 2.582052 CCCTCTGTGTTGGTTGCTTTA 58.418 47.619 0.00 0.00 0.00 1.85
1708 7714 1.402787 CCCTCTGTGTTGGTTGCTTT 58.597 50.000 0.00 0.00 0.00 3.51
1709 7715 1.109323 GCCCTCTGTGTTGGTTGCTT 61.109 55.000 0.00 0.00 0.00 3.91
1710 7716 1.529244 GCCCTCTGTGTTGGTTGCT 60.529 57.895 0.00 0.00 0.00 3.91
1711 7717 1.827789 TGCCCTCTGTGTTGGTTGC 60.828 57.895 0.00 0.00 0.00 4.17
1712 7718 1.785041 CGTGCCCTCTGTGTTGGTTG 61.785 60.000 0.00 0.00 0.00 3.77
1713 7719 1.525995 CGTGCCCTCTGTGTTGGTT 60.526 57.895 0.00 0.00 0.00 3.67
1714 7720 2.111043 CGTGCCCTCTGTGTTGGT 59.889 61.111 0.00 0.00 0.00 3.67
1715 7721 1.525995 AACGTGCCCTCTGTGTTGG 60.526 57.895 0.00 0.00 0.00 3.77
1716 7722 1.095228 ACAACGTGCCCTCTGTGTTG 61.095 55.000 0.00 2.16 44.06 3.33
1717 7723 1.095228 CACAACGTGCCCTCTGTGTT 61.095 55.000 7.48 0.00 35.52 3.32
1718 7724 1.523711 CACAACGTGCCCTCTGTGT 60.524 57.895 7.48 0.00 35.52 3.72
1719 7725 0.603707 ATCACAACGTGCCCTCTGTG 60.604 55.000 9.07 9.07 40.42 3.66
1720 7726 0.108585 AATCACAACGTGCCCTCTGT 59.891 50.000 0.00 0.00 32.98 3.41
1721 7727 0.798776 GAATCACAACGTGCCCTCTG 59.201 55.000 0.00 0.00 32.98 3.35
1722 7728 0.670546 CGAATCACAACGTGCCCTCT 60.671 55.000 0.00 0.00 32.98 3.69
1723 7729 1.787847 CGAATCACAACGTGCCCTC 59.212 57.895 0.00 0.00 32.98 4.30
1724 7730 2.325082 GCGAATCACAACGTGCCCT 61.325 57.895 0.00 0.00 32.98 5.19
1725 7731 2.123988 TTGCGAATCACAACGTGCCC 62.124 55.000 0.00 0.00 32.98 5.36
1726 7732 0.317436 TTTGCGAATCACAACGTGCC 60.317 50.000 0.00 0.00 32.98 5.01
1727 7733 1.447938 CTTTTGCGAATCACAACGTGC 59.552 47.619 0.00 0.00 32.98 5.34
1728 7734 1.447938 GCTTTTGCGAATCACAACGTG 59.552 47.619 0.00 0.00 34.86 4.49
1729 7735 1.753956 GCTTTTGCGAATCACAACGT 58.246 45.000 0.00 0.00 34.86 3.99
1742 7748 4.362476 GGCCGGGCTGTGCTTTTG 62.362 66.667 22.87 0.00 0.00 2.44
1743 7749 4.603535 AGGCCGGGCTGTGCTTTT 62.604 61.111 32.33 2.22 0.00 2.27
1755 7761 3.620300 TTCTACACGACGCAGGCCG 62.620 63.158 0.00 0.00 44.21 6.13
1756 7762 2.092882 GTTCTACACGACGCAGGCC 61.093 63.158 0.00 0.00 0.00 5.19
1757 7763 1.080705 AGTTCTACACGACGCAGGC 60.081 57.895 0.00 0.00 0.00 4.85
1758 7764 0.039437 ACAGTTCTACACGACGCAGG 60.039 55.000 0.00 0.00 0.00 4.85
1759 7765 1.714460 GAACAGTTCTACACGACGCAG 59.286 52.381 6.00 0.00 0.00 5.18
1760 7766 1.065851 TGAACAGTTCTACACGACGCA 59.934 47.619 14.51 0.00 0.00 5.24
1761 7767 1.450905 GTGAACAGTTCTACACGACGC 59.549 52.381 14.51 0.00 0.00 5.19
1766 7772 4.852609 ACAAACGTGAACAGTTCTACAC 57.147 40.909 14.51 4.39 0.00 2.90
1767 7773 6.757478 TGAATACAAACGTGAACAGTTCTACA 59.243 34.615 14.51 0.00 0.00 2.74
1768 7774 7.169035 TGAATACAAACGTGAACAGTTCTAC 57.831 36.000 14.51 9.65 0.00 2.59
1769 7775 7.117236 GGATGAATACAAACGTGAACAGTTCTA 59.883 37.037 14.51 0.00 0.00 2.10
1770 7776 6.073222 GGATGAATACAAACGTGAACAGTTCT 60.073 38.462 14.51 0.00 0.00 3.01
1771 7777 6.077838 GGATGAATACAAACGTGAACAGTTC 58.922 40.000 6.32 6.32 0.00 3.01
1772 7778 5.333798 CGGATGAATACAAACGTGAACAGTT 60.334 40.000 0.00 0.00 0.00 3.16
1773 7779 4.151689 CGGATGAATACAAACGTGAACAGT 59.848 41.667 0.00 0.00 0.00 3.55
1774 7780 4.387559 TCGGATGAATACAAACGTGAACAG 59.612 41.667 0.00 0.00 33.36 3.16
1775 7781 4.308265 TCGGATGAATACAAACGTGAACA 58.692 39.130 0.00 0.00 33.36 3.18
1776 7782 4.914312 TCGGATGAATACAAACGTGAAC 57.086 40.909 0.00 0.00 33.36 3.18
1777 7783 5.230516 CGTATCGGATGAATACAAACGTGAA 59.769 40.000 0.00 0.00 33.36 3.18
1778 7784 4.736307 CGTATCGGATGAATACAAACGTGA 59.264 41.667 0.00 0.00 33.36 4.35
1779 7785 4.990004 CGTATCGGATGAATACAAACGTG 58.010 43.478 0.00 0.00 33.36 4.49
1795 7801 2.653584 CCGTCTAAATAACGCCGTATCG 59.346 50.000 0.00 0.00 38.77 2.92
1796 7802 3.665871 GTCCGTCTAAATAACGCCGTATC 59.334 47.826 0.00 0.00 38.77 2.24
1797 7803 3.316308 AGTCCGTCTAAATAACGCCGTAT 59.684 43.478 0.00 0.00 38.77 3.06
1798 7804 2.682856 AGTCCGTCTAAATAACGCCGTA 59.317 45.455 0.00 0.00 38.77 4.02
1799 7805 1.474077 AGTCCGTCTAAATAACGCCGT 59.526 47.619 0.00 0.00 38.77 5.68
1800 7806 2.199291 AGTCCGTCTAAATAACGCCG 57.801 50.000 0.00 0.00 38.77 6.46
1801 7807 2.606272 CCAAGTCCGTCTAAATAACGCC 59.394 50.000 0.00 0.00 38.77 5.68
1802 7808 2.030091 GCCAAGTCCGTCTAAATAACGC 59.970 50.000 0.00 0.00 38.77 4.84
1803 7809 2.606272 GGCCAAGTCCGTCTAAATAACG 59.394 50.000 0.00 0.00 39.78 3.18
1804 7810 2.941064 GGGCCAAGTCCGTCTAAATAAC 59.059 50.000 4.39 0.00 0.00 1.89
1805 7811 2.572556 TGGGCCAAGTCCGTCTAAATAA 59.427 45.455 2.13 0.00 0.00 1.40
1806 7812 2.169769 CTGGGCCAAGTCCGTCTAAATA 59.830 50.000 8.04 0.00 0.00 1.40
1807 7813 0.988832 TGGGCCAAGTCCGTCTAAAT 59.011 50.000 2.13 0.00 0.00 1.40
1808 7814 0.323629 CTGGGCCAAGTCCGTCTAAA 59.676 55.000 8.04 0.00 0.00 1.85
1809 7815 1.980052 CTGGGCCAAGTCCGTCTAA 59.020 57.895 8.04 0.00 0.00 2.10
1810 7816 2.656069 GCTGGGCCAAGTCCGTCTA 61.656 63.158 9.48 0.00 0.00 2.59
1811 7817 4.021925 GCTGGGCCAAGTCCGTCT 62.022 66.667 9.48 0.00 0.00 4.18
1822 7828 0.244721 GTCACAATTTCTGGCTGGGC 59.755 55.000 0.00 0.00 0.00 5.36
1823 7829 1.542915 CAGTCACAATTTCTGGCTGGG 59.457 52.381 6.60 0.00 0.00 4.45
1824 7830 2.030540 CACAGTCACAATTTCTGGCTGG 60.031 50.000 15.66 4.80 34.02 4.85
1825 7831 2.606308 GCACAGTCACAATTTCTGGCTG 60.606 50.000 11.40 11.40 34.02 4.85
1826 7832 1.610522 GCACAGTCACAATTTCTGGCT 59.389 47.619 0.00 0.00 34.02 4.75
1827 7833 1.610522 AGCACAGTCACAATTTCTGGC 59.389 47.619 0.00 0.00 34.02 4.85
1828 7834 2.030540 CCAGCACAGTCACAATTTCTGG 60.031 50.000 0.00 0.00 34.64 3.86
1829 7835 2.880268 TCCAGCACAGTCACAATTTCTG 59.120 45.455 0.00 0.00 35.60 3.02
1830 7836 2.880890 GTCCAGCACAGTCACAATTTCT 59.119 45.455 0.00 0.00 0.00 2.52
1831 7837 2.030805 GGTCCAGCACAGTCACAATTTC 60.031 50.000 0.00 0.00 0.00 2.17
1832 7838 1.956477 GGTCCAGCACAGTCACAATTT 59.044 47.619 0.00 0.00 0.00 1.82
1833 7839 1.609208 GGTCCAGCACAGTCACAATT 58.391 50.000 0.00 0.00 0.00 2.32
1834 7840 0.603707 CGGTCCAGCACAGTCACAAT 60.604 55.000 0.00 0.00 0.00 2.71
1835 7841 1.227527 CGGTCCAGCACAGTCACAA 60.228 57.895 0.00 0.00 0.00 3.33
1836 7842 1.681486 TTCGGTCCAGCACAGTCACA 61.681 55.000 0.00 0.00 0.00 3.58
1837 7843 0.320771 ATTCGGTCCAGCACAGTCAC 60.321 55.000 0.00 0.00 0.00 3.67
1838 7844 0.320683 CATTCGGTCCAGCACAGTCA 60.321 55.000 0.00 0.00 0.00 3.41
1839 7845 1.639298 GCATTCGGTCCAGCACAGTC 61.639 60.000 0.00 0.00 0.00 3.51
1840 7846 1.672356 GCATTCGGTCCAGCACAGT 60.672 57.895 0.00 0.00 0.00 3.55
1841 7847 2.743752 CGCATTCGGTCCAGCACAG 61.744 63.158 0.00 0.00 0.00 3.66
1842 7848 2.741985 CGCATTCGGTCCAGCACA 60.742 61.111 0.00 0.00 0.00 4.57
1843 7849 2.434185 TCGCATTCGGTCCAGCAC 60.434 61.111 0.00 0.00 36.13 4.40
1844 7850 2.125552 CTCGCATTCGGTCCAGCA 60.126 61.111 0.00 0.00 36.13 4.41
1845 7851 3.567797 GCTCGCATTCGGTCCAGC 61.568 66.667 0.00 0.00 36.13 4.85
1846 7852 2.892425 GGCTCGCATTCGGTCCAG 60.892 66.667 0.00 0.00 36.13 3.86
1847 7853 3.700970 TGGCTCGCATTCGGTCCA 61.701 61.111 0.00 0.00 36.01 4.02
1848 7854 3.195698 GTGGCTCGCATTCGGTCC 61.196 66.667 0.00 0.00 36.13 4.46
1849 7855 3.554692 CGTGGCTCGCATTCGGTC 61.555 66.667 0.00 0.00 36.13 4.79
1850 7856 4.373116 ACGTGGCTCGCATTCGGT 62.373 61.111 9.11 0.00 44.19 4.69
1851 7857 3.554692 GACGTGGCTCGCATTCGG 61.555 66.667 9.11 0.00 44.19 4.30
1852 7858 2.792290 CTGACGTGGCTCGCATTCG 61.792 63.158 9.11 0.00 44.19 3.34
1853 7859 2.456119 CCTGACGTGGCTCGCATTC 61.456 63.158 9.11 0.02 44.19 2.67
1854 7860 2.434884 CCTGACGTGGCTCGCATT 60.435 61.111 9.11 0.00 44.19 3.56
1855 7861 3.695606 ACCTGACGTGGCTCGCAT 61.696 61.111 9.11 0.00 44.19 4.73
1856 7862 4.662961 CACCTGACGTGGCTCGCA 62.663 66.667 9.11 7.31 44.19 5.10
1866 7872 4.626081 ACACCAGCGCCACCTGAC 62.626 66.667 2.29 0.00 34.77 3.51
1867 7873 3.825160 GAACACCAGCGCCACCTGA 62.825 63.158 2.29 0.00 34.77 3.86
1868 7874 3.357079 GAACACCAGCGCCACCTG 61.357 66.667 2.29 0.00 0.00 4.00
1869 7875 3.832237 CTGAACACCAGCGCCACCT 62.832 63.158 2.29 0.00 35.89 4.00
1870 7876 3.357079 CTGAACACCAGCGCCACC 61.357 66.667 2.29 0.00 35.89 4.61
1871 7877 2.591715 ACTGAACACCAGCGCCAC 60.592 61.111 2.29 0.00 46.81 5.01
1872 7878 2.591429 CACTGAACACCAGCGCCA 60.591 61.111 2.29 0.00 46.81 5.69
1873 7879 2.117941 GAACACTGAACACCAGCGCC 62.118 60.000 2.29 0.00 46.81 6.53
1874 7880 1.279840 GAACACTGAACACCAGCGC 59.720 57.895 0.00 0.00 46.81 5.92
1875 7881 1.003545 CTTGAACACTGAACACCAGCG 60.004 52.381 0.00 0.00 46.81 5.18
1876 7882 1.334869 CCTTGAACACTGAACACCAGC 59.665 52.381 0.00 0.00 46.81 4.85
1878 7884 2.021723 GCCCTTGAACACTGAACACCA 61.022 52.381 0.00 0.00 0.00 4.17
1879 7885 0.668535 GCCCTTGAACACTGAACACC 59.331 55.000 0.00 0.00 0.00 4.16
1880 7886 0.668535 GGCCCTTGAACACTGAACAC 59.331 55.000 0.00 0.00 0.00 3.32
1881 7887 0.550914 AGGCCCTTGAACACTGAACA 59.449 50.000 0.00 0.00 0.00 3.18
1882 7888 1.338020 CAAGGCCCTTGAACACTGAAC 59.662 52.381 19.04 0.00 43.42 3.18
1883 7889 1.691196 CAAGGCCCTTGAACACTGAA 58.309 50.000 19.04 0.00 43.42 3.02
1884 7890 0.178992 CCAAGGCCCTTGAACACTGA 60.179 55.000 25.16 0.00 43.42 3.41
1885 7891 1.809567 GCCAAGGCCCTTGAACACTG 61.810 60.000 25.16 7.88 43.42 3.66
1886 7892 1.531602 GCCAAGGCCCTTGAACACT 60.532 57.895 25.16 0.00 43.42 3.55
1887 7893 3.051210 GCCAAGGCCCTTGAACAC 58.949 61.111 25.16 7.46 43.42 3.32
1905 7911 1.462283 CTGCTTCTTGACCACATCGTG 59.538 52.381 0.00 0.00 0.00 4.35
1906 7912 1.070758 ACTGCTTCTTGACCACATCGT 59.929 47.619 0.00 0.00 0.00 3.73
1907 7913 1.462283 CACTGCTTCTTGACCACATCG 59.538 52.381 0.00 0.00 0.00 3.84
1908 7914 2.771089 TCACTGCTTCTTGACCACATC 58.229 47.619 0.00 0.00 0.00 3.06
1909 7915 2.880890 GTTCACTGCTTCTTGACCACAT 59.119 45.455 0.00 0.00 0.00 3.21
1910 7916 2.288666 GTTCACTGCTTCTTGACCACA 58.711 47.619 0.00 0.00 0.00 4.17
1911 7917 1.604278 GGTTCACTGCTTCTTGACCAC 59.396 52.381 0.00 0.00 0.00 4.16
1912 7918 1.490490 AGGTTCACTGCTTCTTGACCA 59.510 47.619 0.00 0.00 0.00 4.02
1913 7919 2.262423 AGGTTCACTGCTTCTTGACC 57.738 50.000 0.00 0.00 0.00 4.02
1914 7920 3.728845 TGTAGGTTCACTGCTTCTTGAC 58.271 45.455 0.00 0.00 32.41 3.18
1915 7921 4.623932 ATGTAGGTTCACTGCTTCTTGA 57.376 40.909 0.00 0.00 32.41 3.02
1916 7922 5.877012 ACATATGTAGGTTCACTGCTTCTTG 59.123 40.000 6.56 0.00 32.41 3.02
1917 7923 6.054860 ACATATGTAGGTTCACTGCTTCTT 57.945 37.500 6.56 0.00 32.41 2.52
1918 7924 5.683876 ACATATGTAGGTTCACTGCTTCT 57.316 39.130 6.56 0.00 32.41 2.85
1919 7925 9.542462 TTTATACATATGTAGGTTCACTGCTTC 57.458 33.333 19.80 0.00 33.52 3.86
1920 7926 9.547753 CTTTATACATATGTAGGTTCACTGCTT 57.452 33.333 19.80 2.66 33.52 3.91
1921 7927 8.705594 ACTTTATACATATGTAGGTTCACTGCT 58.294 33.333 19.80 3.13 33.52 4.24
1922 7928 8.888579 ACTTTATACATATGTAGGTTCACTGC 57.111 34.615 19.80 0.00 33.52 4.40
1937 7943 9.444600 CTTGTGGGTTGTACTTACTTTATACAT 57.555 33.333 0.00 0.00 0.00 2.29
1938 7944 8.649591 TCTTGTGGGTTGTACTTACTTTATACA 58.350 33.333 0.00 0.00 0.00 2.29
1939 7945 9.148104 CTCTTGTGGGTTGTACTTACTTTATAC 57.852 37.037 0.00 0.00 0.00 1.47
1940 7946 8.316214 CCTCTTGTGGGTTGTACTTACTTTATA 58.684 37.037 0.00 0.00 0.00 0.98
1941 7947 7.016858 TCCTCTTGTGGGTTGTACTTACTTTAT 59.983 37.037 0.00 0.00 0.00 1.40
1942 7948 6.327104 TCCTCTTGTGGGTTGTACTTACTTTA 59.673 38.462 0.00 0.00 0.00 1.85
1943 7949 5.131475 TCCTCTTGTGGGTTGTACTTACTTT 59.869 40.000 0.00 0.00 0.00 2.66
1944 7950 4.657039 TCCTCTTGTGGGTTGTACTTACTT 59.343 41.667 0.00 0.00 0.00 2.24
1945 7951 4.228824 TCCTCTTGTGGGTTGTACTTACT 58.771 43.478 0.00 0.00 0.00 2.24
1946 7952 4.612264 TCCTCTTGTGGGTTGTACTTAC 57.388 45.455 0.00 0.00 0.00 2.34
1947 7953 6.021030 ACTATCCTCTTGTGGGTTGTACTTA 58.979 40.000 0.00 0.00 0.00 2.24
1948 7954 4.844655 ACTATCCTCTTGTGGGTTGTACTT 59.155 41.667 0.00 0.00 0.00 2.24
1949 7955 4.223032 CACTATCCTCTTGTGGGTTGTACT 59.777 45.833 0.00 0.00 0.00 2.73
1950 7956 4.504858 CACTATCCTCTTGTGGGTTGTAC 58.495 47.826 0.00 0.00 0.00 2.90
1951 7957 3.517901 CCACTATCCTCTTGTGGGTTGTA 59.482 47.826 0.00 0.00 44.26 2.41
1952 7958 2.305927 CCACTATCCTCTTGTGGGTTGT 59.694 50.000 0.00 0.00 44.26 3.32
1953 7959 2.941415 GCCACTATCCTCTTGTGGGTTG 60.941 54.545 12.44 0.00 46.95 3.77
1954 7960 1.282157 GCCACTATCCTCTTGTGGGTT 59.718 52.381 12.44 0.00 46.95 4.11
1955 7961 0.912486 GCCACTATCCTCTTGTGGGT 59.088 55.000 12.44 0.00 46.95 4.51
1956 7962 0.911769 TGCCACTATCCTCTTGTGGG 59.088 55.000 12.44 0.00 46.95 4.61
1958 7964 2.234661 TCTGTGCCACTATCCTCTTGTG 59.765 50.000 0.00 0.00 0.00 3.33
1959 7965 2.234908 GTCTGTGCCACTATCCTCTTGT 59.765 50.000 0.00 0.00 0.00 3.16
1960 7966 2.234661 TGTCTGTGCCACTATCCTCTTG 59.765 50.000 0.00 0.00 0.00 3.02
1961 7967 2.499289 CTGTCTGTGCCACTATCCTCTT 59.501 50.000 0.00 0.00 0.00 2.85
1962 7968 2.106566 CTGTCTGTGCCACTATCCTCT 58.893 52.381 0.00 0.00 0.00 3.69
1963 7969 1.137872 CCTGTCTGTGCCACTATCCTC 59.862 57.143 0.00 0.00 0.00 3.71
1964 7970 1.198713 CCTGTCTGTGCCACTATCCT 58.801 55.000 0.00 0.00 0.00 3.24
1965 7971 0.905357 ACCTGTCTGTGCCACTATCC 59.095 55.000 0.00 0.00 0.00 2.59
1966 7972 1.469940 CGACCTGTCTGTGCCACTATC 60.470 57.143 0.00 0.00 0.00 2.08
1967 7973 0.532573 CGACCTGTCTGTGCCACTAT 59.467 55.000 0.00 0.00 0.00 2.12
1968 7974 1.532604 CCGACCTGTCTGTGCCACTA 61.533 60.000 0.00 0.00 0.00 2.74
1969 7975 2.737180 CGACCTGTCTGTGCCACT 59.263 61.111 0.00 0.00 0.00 4.00
1970 7976 2.357517 CCGACCTGTCTGTGCCAC 60.358 66.667 0.00 0.00 0.00 5.01
1971 7977 3.625897 CCCGACCTGTCTGTGCCA 61.626 66.667 0.00 0.00 0.00 4.92
1972 7978 3.626924 ACCCGACCTGTCTGTGCC 61.627 66.667 0.00 0.00 0.00 5.01
1973 7979 2.357517 CACCCGACCTGTCTGTGC 60.358 66.667 4.58 0.00 0.00 4.57
1974 7980 1.532604 TAGCACCCGACCTGTCTGTG 61.533 60.000 10.62 10.62 34.92 3.66
1975 7981 0.830444 TTAGCACCCGACCTGTCTGT 60.830 55.000 0.00 0.00 0.00 3.41
1976 7982 0.537188 ATTAGCACCCGACCTGTCTG 59.463 55.000 0.00 0.00 0.00 3.51
1977 7983 0.537188 CATTAGCACCCGACCTGTCT 59.463 55.000 0.00 0.00 0.00 3.41
1978 7984 0.462047 CCATTAGCACCCGACCTGTC 60.462 60.000 0.00 0.00 0.00 3.51
1979 7985 1.602237 CCATTAGCACCCGACCTGT 59.398 57.895 0.00 0.00 0.00 4.00
1980 7986 1.153168 CCCATTAGCACCCGACCTG 60.153 63.158 0.00 0.00 0.00 4.00
1981 7987 1.306654 TCCCATTAGCACCCGACCT 60.307 57.895 0.00 0.00 0.00 3.85
1982 7988 1.153229 GTCCCATTAGCACCCGACC 60.153 63.158 0.00 0.00 0.00 4.79
1983 7989 0.743345 GTGTCCCATTAGCACCCGAC 60.743 60.000 0.00 0.00 0.00 4.79
1984 7990 0.907704 AGTGTCCCATTAGCACCCGA 60.908 55.000 0.00 0.00 33.96 5.14
1985 7991 0.035439 AAGTGTCCCATTAGCACCCG 60.035 55.000 0.00 0.00 33.96 5.28
1986 7992 2.215942 AAAGTGTCCCATTAGCACCC 57.784 50.000 0.00 0.00 33.96 4.61
2005 8011 2.639065 CCGCTAGCCATGTCCTAAAAA 58.361 47.619 9.66 0.00 0.00 1.94
2006 8012 1.134220 CCCGCTAGCCATGTCCTAAAA 60.134 52.381 9.66 0.00 0.00 1.52
2007 8013 0.468226 CCCGCTAGCCATGTCCTAAA 59.532 55.000 9.66 0.00 0.00 1.85
2008 8014 2.040009 GCCCGCTAGCCATGTCCTAA 62.040 60.000 9.66 0.00 0.00 2.69
2009 8015 2.507854 GCCCGCTAGCCATGTCCTA 61.508 63.158 9.66 0.00 0.00 2.94
2010 8016 3.866582 GCCCGCTAGCCATGTCCT 61.867 66.667 9.66 0.00 0.00 3.85
2035 8041 3.242897 TAGTTCCCACCAACGGGCG 62.243 63.158 0.00 0.00 46.92 6.13
2036 8042 1.376812 CTAGTTCCCACCAACGGGC 60.377 63.158 0.00 0.00 46.92 6.13
2038 8044 1.740296 CGCTAGTTCCCACCAACGG 60.740 63.158 0.00 0.00 0.00 4.44
2039 8045 2.388232 GCGCTAGTTCCCACCAACG 61.388 63.158 0.00 0.00 0.00 4.10
2040 8046 1.003718 AGCGCTAGTTCCCACCAAC 60.004 57.895 8.99 0.00 0.00 3.77
2041 8047 1.295423 GAGCGCTAGTTCCCACCAA 59.705 57.895 11.50 0.00 0.00 3.67
2042 8048 2.978824 GAGCGCTAGTTCCCACCA 59.021 61.111 11.50 0.00 0.00 4.17
2043 8049 2.202756 CGAGCGCTAGTTCCCACC 60.203 66.667 11.50 0.00 0.00 4.61
2044 8050 1.516603 GACGAGCGCTAGTTCCCAC 60.517 63.158 24.22 7.56 0.00 4.61
2045 8051 2.707849 GGACGAGCGCTAGTTCCCA 61.708 63.158 24.22 0.00 0.00 4.37
2046 8052 2.104530 GGACGAGCGCTAGTTCCC 59.895 66.667 24.22 17.43 0.00 3.97
2047 8053 0.389426 TTTGGACGAGCGCTAGTTCC 60.389 55.000 24.04 23.25 0.00 3.62
2048 8054 1.641577 ATTTGGACGAGCGCTAGTTC 58.358 50.000 24.22 22.51 0.00 3.01
2049 8055 2.953466 TATTTGGACGAGCGCTAGTT 57.047 45.000 24.22 10.60 0.00 2.24
2050 8056 2.426024 TCTTATTTGGACGAGCGCTAGT 59.574 45.455 23.67 23.67 0.00 2.57
2051 8057 3.079960 TCTTATTTGGACGAGCGCTAG 57.920 47.619 11.50 14.42 0.00 3.42
2052 8058 3.513680 TTCTTATTTGGACGAGCGCTA 57.486 42.857 11.50 0.00 0.00 4.26
2053 8059 2.380084 TTCTTATTTGGACGAGCGCT 57.620 45.000 11.27 11.27 0.00 5.92
2054 8060 3.465122 TTTTCTTATTTGGACGAGCGC 57.535 42.857 0.00 0.00 0.00 5.92
2072 8078 2.331451 GCACGTCGGCTGCTTTTT 59.669 55.556 0.00 0.00 0.00 1.94
2073 8079 2.899838 TGCACGTCGGCTGCTTTT 60.900 55.556 11.67 0.00 35.53 2.27
2074 8080 3.649986 GTGCACGTCGGCTGCTTT 61.650 61.111 0.00 0.00 35.53 3.51
2082 8088 3.756677 CTGCTGTCGTGCACGTCG 61.757 66.667 35.74 25.49 38.12 5.12
2083 8089 2.147204 GAACTGCTGTCGTGCACGTC 62.147 60.000 35.74 30.78 38.12 4.34
2084 8090 2.202878 AACTGCTGTCGTGCACGT 60.203 55.556 35.74 14.71 38.12 4.49
2085 8091 2.237066 TGAACTGCTGTCGTGCACG 61.237 57.895 32.76 32.76 38.12 5.34
2086 8092 1.154205 AGTGAACTGCTGTCGTGCAC 61.154 55.000 6.82 6.82 38.12 4.57
2087 8093 0.387565 TAGTGAACTGCTGTCGTGCA 59.612 50.000 0.00 0.00 41.05 4.57
2088 8094 1.497991 TTAGTGAACTGCTGTCGTGC 58.502 50.000 0.00 0.00 0.00 5.34
2089 8095 4.530094 TTTTTAGTGAACTGCTGTCGTG 57.470 40.909 0.00 0.00 0.00 4.35
2109 8115 2.420022 CGCGAGGACATGATTCCTTTTT 59.580 45.455 0.00 0.00 46.80 1.94
2110 8116 2.009774 CGCGAGGACATGATTCCTTTT 58.990 47.619 0.00 0.00 46.80 2.27
2111 8117 1.066143 ACGCGAGGACATGATTCCTTT 60.066 47.619 15.93 0.00 46.80 3.11
2112 8118 0.537188 ACGCGAGGACATGATTCCTT 59.463 50.000 15.93 0.00 46.80 3.36
2114 8120 1.766143 GCACGCGAGGACATGATTCC 61.766 60.000 15.93 0.00 35.66 3.01
2115 8121 1.083806 TGCACGCGAGGACATGATTC 61.084 55.000 15.93 0.00 0.00 2.52
2116 8122 0.462581 ATGCACGCGAGGACATGATT 60.463 50.000 15.93 0.00 30.87 2.57
2117 8123 0.462581 AATGCACGCGAGGACATGAT 60.463 50.000 15.93 0.00 32.17 2.45
2118 8124 0.673333 AAATGCACGCGAGGACATGA 60.673 50.000 15.93 0.00 32.17 3.07
2119 8125 1.006086 TAAATGCACGCGAGGACATG 58.994 50.000 15.93 0.00 32.17 3.21
2120 8126 1.953559 ATAAATGCACGCGAGGACAT 58.046 45.000 15.93 7.64 33.00 3.06
2121 8127 1.732941 AATAAATGCACGCGAGGACA 58.267 45.000 15.93 5.22 0.00 4.02
2122 8128 2.159572 ACAAATAAATGCACGCGAGGAC 60.160 45.455 15.93 0.00 0.00 3.85
2123 8129 2.080693 ACAAATAAATGCACGCGAGGA 58.919 42.857 15.93 6.68 0.00 3.71
2124 8130 2.176369 CACAAATAAATGCACGCGAGG 58.824 47.619 15.93 5.48 0.00 4.63
2125 8131 2.159585 TCCACAAATAAATGCACGCGAG 60.160 45.455 15.93 5.97 0.00 5.03
2126 8132 1.807142 TCCACAAATAAATGCACGCGA 59.193 42.857 15.93 0.00 0.00 5.87
2127 8133 2.254918 TCCACAAATAAATGCACGCG 57.745 45.000 3.53 3.53 0.00 6.01
2128 8134 4.172505 TGAATCCACAAATAAATGCACGC 58.827 39.130 0.00 0.00 0.00 5.34
2129 8135 6.702972 TTTGAATCCACAAATAAATGCACG 57.297 33.333 0.00 0.00 35.29 5.34
2130 8136 8.558700 ACTTTTTGAATCCACAAATAAATGCAC 58.441 29.630 0.00 0.00 39.09 4.57
2131 8137 8.674263 ACTTTTTGAATCCACAAATAAATGCA 57.326 26.923 0.00 0.00 39.09 3.96
2132 8138 9.949174 AAACTTTTTGAATCCACAAATAAATGC 57.051 25.926 0.00 0.00 39.09 3.56
2169 8175 8.836413 TGAATTTCGACACTTAAATCAGAAGTT 58.164 29.630 0.00 0.00 34.90 2.66
2170 8176 8.378172 TGAATTTCGACACTTAAATCAGAAGT 57.622 30.769 0.00 0.00 37.64 3.01
2171 8177 9.831737 ATTGAATTTCGACACTTAAATCAGAAG 57.168 29.630 0.00 0.00 0.00 2.85
2181 8187 8.930760 TGAAAACAAAATTGAATTTCGACACTT 58.069 25.926 3.32 0.00 38.78 3.16
2182 8188 8.379902 GTGAAAACAAAATTGAATTTCGACACT 58.620 29.630 3.32 0.00 38.78 3.55
2183 8189 8.165428 TGTGAAAACAAAATTGAATTTCGACAC 58.835 29.630 3.32 9.09 38.78 3.67
2184 8190 8.244494 TGTGAAAACAAAATTGAATTTCGACA 57.756 26.923 3.32 16.81 38.78 4.35
2185 8191 8.379902 ACTGTGAAAACAAAATTGAATTTCGAC 58.620 29.630 3.32 15.51 38.78 4.20
2186 8192 8.472683 ACTGTGAAAACAAAATTGAATTTCGA 57.527 26.923 3.32 0.00 38.78 3.71
2187 8193 8.987729 CAACTGTGAAAACAAAATTGAATTTCG 58.012 29.630 3.32 0.00 38.78 3.46
2188 8194 9.276397 CCAACTGTGAAAACAAAATTGAATTTC 57.724 29.630 3.32 15.57 37.68 2.17
2189 8195 7.754475 GCCAACTGTGAAAACAAAATTGAATTT 59.246 29.630 0.00 0.00 0.00 1.82
2190 8196 7.121020 AGCCAACTGTGAAAACAAAATTGAATT 59.879 29.630 0.00 0.00 0.00 2.17
2191 8197 6.598850 AGCCAACTGTGAAAACAAAATTGAAT 59.401 30.769 0.00 0.00 0.00 2.57
2192 8198 5.936956 AGCCAACTGTGAAAACAAAATTGAA 59.063 32.000 0.00 0.00 0.00 2.69
2193 8199 5.486526 AGCCAACTGTGAAAACAAAATTGA 58.513 33.333 0.00 0.00 0.00 2.57
2194 8200 5.799681 AGCCAACTGTGAAAACAAAATTG 57.200 34.783 0.00 0.00 0.00 2.32
2195 8201 6.654582 AGAAAGCCAACTGTGAAAACAAAATT 59.345 30.769 0.00 0.00 0.00 1.82
2196 8202 6.172630 AGAAAGCCAACTGTGAAAACAAAAT 58.827 32.000 0.00 0.00 0.00 1.82
2197 8203 5.546526 AGAAAGCCAACTGTGAAAACAAAA 58.453 33.333 0.00 0.00 0.00 2.44
2198 8204 5.146010 AGAAAGCCAACTGTGAAAACAAA 57.854 34.783 0.00 0.00 0.00 2.83
2199 8205 4.674101 CGAGAAAGCCAACTGTGAAAACAA 60.674 41.667 0.00 0.00 0.00 2.83
2200 8206 3.181501 CGAGAAAGCCAACTGTGAAAACA 60.182 43.478 0.00 0.00 0.00 2.83
2201 8207 3.363178 CGAGAAAGCCAACTGTGAAAAC 58.637 45.455 0.00 0.00 0.00 2.43
2202 8208 2.223479 GCGAGAAAGCCAACTGTGAAAA 60.223 45.455 0.00 0.00 0.00 2.29
2203 8209 1.333619 GCGAGAAAGCCAACTGTGAAA 59.666 47.619 0.00 0.00 0.00 2.69
2204 8210 0.944386 GCGAGAAAGCCAACTGTGAA 59.056 50.000 0.00 0.00 0.00 3.18
2205 8211 1.221466 CGCGAGAAAGCCAACTGTGA 61.221 55.000 0.00 0.00 0.00 3.58
2206 8212 1.205064 CGCGAGAAAGCCAACTGTG 59.795 57.895 0.00 0.00 0.00 3.66
2207 8213 1.069090 TCGCGAGAAAGCCAACTGT 59.931 52.632 3.71 0.00 37.03 3.55
2208 8214 1.493311 GTCGCGAGAAAGCCAACTG 59.507 57.895 10.24 0.00 45.01 3.16
2209 8215 2.022129 CGTCGCGAGAAAGCCAACT 61.022 57.895 10.24 0.00 45.01 3.16
2210 8216 2.019951 TCGTCGCGAGAAAGCCAAC 61.020 57.895 10.24 0.00 45.01 3.77
2211 8217 2.337170 TCGTCGCGAGAAAGCCAA 59.663 55.556 10.24 0.00 45.01 4.52
2242 8248 9.913310 TCGATGAAACCTATCTATATGAGATCT 57.087 33.333 0.00 0.00 41.37 2.75
2245 8251 9.521841 AGTTCGATGAAACCTATCTATATGAGA 57.478 33.333 0.00 0.00 39.01 3.27
2274 8280 2.025155 TGCCGTAAGTTGCCTCAAAAA 58.975 42.857 0.00 0.00 0.00 1.94
2275 8281 1.335496 GTGCCGTAAGTTGCCTCAAAA 59.665 47.619 0.00 0.00 0.00 2.44
2276 8282 0.948678 GTGCCGTAAGTTGCCTCAAA 59.051 50.000 0.00 0.00 0.00 2.69
2277 8283 1.225376 CGTGCCGTAAGTTGCCTCAA 61.225 55.000 0.00 0.00 0.00 3.02
2278 8284 1.666553 CGTGCCGTAAGTTGCCTCA 60.667 57.895 0.00 0.00 0.00 3.86
2279 8285 0.739813 ATCGTGCCGTAAGTTGCCTC 60.740 55.000 0.00 0.00 0.00 4.70
2280 8286 1.019278 CATCGTGCCGTAAGTTGCCT 61.019 55.000 0.00 0.00 0.00 4.75
2281 8287 1.423845 CATCGTGCCGTAAGTTGCC 59.576 57.895 0.00 0.00 0.00 4.52
2282 8288 1.017177 TCCATCGTGCCGTAAGTTGC 61.017 55.000 0.00 0.00 0.00 4.17
2283 8289 0.999406 CTCCATCGTGCCGTAAGTTG 59.001 55.000 0.00 0.00 0.00 3.16
2284 8290 0.108329 CCTCCATCGTGCCGTAAGTT 60.108 55.000 0.00 0.00 0.00 2.66
2285 8291 1.515954 CCTCCATCGTGCCGTAAGT 59.484 57.895 0.00 0.00 0.00 2.24
2286 8292 1.883084 GCCTCCATCGTGCCGTAAG 60.883 63.158 0.00 0.00 0.00 2.34
2287 8293 2.173758 TTGCCTCCATCGTGCCGTAA 62.174 55.000 0.00 0.00 0.00 3.18
2288 8294 2.651105 TTGCCTCCATCGTGCCGTA 61.651 57.895 0.00 0.00 0.00 4.02
2289 8295 4.015406 TTGCCTCCATCGTGCCGT 62.015 61.111 0.00 0.00 0.00 5.68
2290 8296 3.499737 GTTGCCTCCATCGTGCCG 61.500 66.667 0.00 0.00 0.00 5.69
2291 8297 1.244019 AAAGTTGCCTCCATCGTGCC 61.244 55.000 0.00 0.00 0.00 5.01
2292 8298 1.398390 CTAAAGTTGCCTCCATCGTGC 59.602 52.381 0.00 0.00 0.00 5.34
2293 8299 2.416547 CACTAAAGTTGCCTCCATCGTG 59.583 50.000 0.00 0.00 0.00 4.35
2294 8300 2.699954 CACTAAAGTTGCCTCCATCGT 58.300 47.619 0.00 0.00 0.00 3.73
2295 8301 1.398390 GCACTAAAGTTGCCTCCATCG 59.602 52.381 0.00 0.00 0.00 3.84
2296 8302 2.716217 AGCACTAAAGTTGCCTCCATC 58.284 47.619 0.00 0.00 0.00 3.51
2297 8303 2.887151 AGCACTAAAGTTGCCTCCAT 57.113 45.000 0.00 0.00 0.00 3.41
2298 8304 4.714802 TCTATAGCACTAAAGTTGCCTCCA 59.285 41.667 0.00 0.00 0.00 3.86
2299 8305 5.277857 TCTATAGCACTAAAGTTGCCTCC 57.722 43.478 0.00 0.00 0.00 4.30
2300 8306 7.611213 TTTTCTATAGCACTAAAGTTGCCTC 57.389 36.000 0.00 0.00 0.00 4.70
2301 8307 6.094186 GCTTTTCTATAGCACTAAAGTTGCCT 59.906 38.462 0.00 0.00 38.51 4.75
2302 8308 6.128007 TGCTTTTCTATAGCACTAAAGTTGCC 60.128 38.462 0.00 0.00 43.30 4.52
2303 8309 6.842163 TGCTTTTCTATAGCACTAAAGTTGC 58.158 36.000 0.00 0.00 43.30 4.17


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.