Multiple sequence alignment - TraesCS4A01G457400

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G457400 chr4A 100.000 3615 0 0 1 3615 722836944 722840558 0.000000e+00 6676.0
1 TraesCS4A01G457400 chr4A 94.937 711 32 1 2029 2735 722906199 722905489 0.000000e+00 1110.0
2 TraesCS4A01G457400 chr4A 87.520 617 51 18 980 1582 722906835 722906231 0.000000e+00 689.0
3 TraesCS4A01G457400 chr4A 96.923 65 1 1 3301 3364 618085097 618085161 1.370000e-19 108.0
4 TraesCS4A01G457400 chr4A 96.610 59 2 0 3305 3363 701083931 701083989 8.260000e-17 99.0
5 TraesCS4A01G457400 chr7A 94.128 1175 57 7 1944 3117 13194311 13193148 0.000000e+00 1777.0
6 TraesCS4A01G457400 chr7A 93.237 695 37 3 1981 2671 13626728 13626040 0.000000e+00 1014.0
7 TraesCS4A01G457400 chr7A 84.906 636 52 19 810 1437 13195661 13195062 1.440000e-168 603.0
8 TraesCS4A01G457400 chr7A 80.669 688 97 24 2404 3063 2997745 2998424 5.390000e-138 501.0
9 TraesCS4A01G457400 chr7A 87.805 410 42 5 1457 1859 13627509 13627101 1.170000e-129 473.0
10 TraesCS4A01G457400 chr7A 79.762 672 105 17 2407 3069 3385848 3385199 3.290000e-125 459.0
11 TraesCS4A01G457400 chr7A 88.406 345 38 2 1954 2297 3386199 3385856 7.220000e-112 414.0
12 TraesCS4A01G457400 chr7A 82.100 419 53 15 1479 1888 13195062 13194657 4.470000e-89 339.0
13 TraesCS4A01G457400 chr7D 92.633 1181 50 12 1944 3117 13718964 13717814 0.000000e+00 1664.0
14 TraesCS4A01G457400 chr7D 85.405 925 74 30 978 1888 13720184 13719307 0.000000e+00 904.0
15 TraesCS4A01G457400 chr7D 83.470 611 63 25 777 1361 13734860 13734262 5.310000e-148 534.0
16 TraesCS4A01G457400 chr7D 86.312 263 15 6 3362 3609 13717815 13717559 2.140000e-67 267.0
17 TraesCS4A01G457400 chr7D 92.593 108 8 0 2 109 13738805 13738698 4.830000e-34 156.0
18 TraesCS4A01G457400 chr7D 93.151 73 2 3 3301 3372 607790804 607790874 1.780000e-18 104.0
19 TraesCS4A01G457400 chr7D 94.737 38 1 1 1944 1981 13720620 13720584 1.400000e-04 58.4
20 TraesCS4A01G457400 chr4B 93.396 106 7 0 3178 3283 216793891 216793996 1.340000e-34 158.0
21 TraesCS4A01G457400 chr4B 95.833 96 4 0 3188 3283 216795982 216796077 4.830000e-34 156.0
22 TraesCS4A01G457400 chr4B 93.204 103 7 0 3181 3283 58745969 58745867 6.250000e-33 152.0
23 TraesCS4A01G457400 chr7B 95.833 96 4 0 3188 3283 527622729 527622634 4.830000e-34 156.0
24 TraesCS4A01G457400 chr3A 95.833 96 4 0 3188 3283 549415510 549415415 4.830000e-34 156.0
25 TraesCS4A01G457400 chr3A 95.833 96 4 0 3188 3283 549417827 549417732 4.830000e-34 156.0
26 TraesCS4A01G457400 chr3A 93.151 73 3 2 3305 3376 348834514 348834585 4.940000e-19 106.0
27 TraesCS4A01G457400 chr1B 95.833 96 4 0 3188 3283 322950822 322950727 4.830000e-34 156.0
28 TraesCS4A01G457400 chr6B 96.739 92 3 0 3188 3279 114017879 114017970 1.740000e-33 154.0
29 TraesCS4A01G457400 chr6B 88.462 104 6 5 3090 3188 423542170 423542068 1.760000e-23 121.0
30 TraesCS4A01G457400 chrUn 94.792 96 5 0 3188 3283 293109535 293109630 2.250000e-32 150.0
31 TraesCS4A01G457400 chr2A 95.122 82 4 0 3107 3188 735403161 735403242 2.930000e-26 130.0
32 TraesCS4A01G457400 chr3B 95.000 80 4 0 3109 3188 347905878 347905799 3.790000e-25 126.0
33 TraesCS4A01G457400 chr2B 93.976 83 5 0 3106 3188 171935636 171935718 3.790000e-25 126.0
34 TraesCS4A01G457400 chr2B 93.976 83 5 0 3106 3188 570759119 570759037 3.790000e-25 126.0
35 TraesCS4A01G457400 chr5D 93.902 82 5 0 3107 3188 386664025 386663944 1.360000e-24 124.0
36 TraesCS4A01G457400 chr5D 88.350 103 8 4 3089 3188 261390132 261390233 1.760000e-23 121.0
37 TraesCS4A01G457400 chr5D 96.875 64 1 1 3301 3363 59205610 59205547 4.940000e-19 106.0
38 TraesCS4A01G457400 chr5B 92.941 85 6 0 3104 3188 405944464 405944548 1.360000e-24 124.0
39 TraesCS4A01G457400 chr6D 92.857 84 6 0 3105 3188 160470635 160470718 4.900000e-24 122.0
40 TraesCS4A01G457400 chr6D 91.892 74 3 1 3305 3375 160470714 160470787 2.300000e-17 100.0
41 TraesCS4A01G457400 chr4D 96.875 64 1 1 3301 3363 121406864 121406927 4.940000e-19 106.0
42 TraesCS4A01G457400 chr4D 96.875 64 1 1 3301 3363 427981361 427981298 4.940000e-19 106.0
43 TraesCS4A01G457400 chr2D 96.875 64 1 1 3301 3363 198464270 198464333 4.940000e-19 106.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G457400 chr4A 722836944 722840558 3614 False 6676.000000 6676 100.000000 1 3615 1 chr4A.!!$F3 3614
1 TraesCS4A01G457400 chr4A 722905489 722906835 1346 True 899.500000 1110 91.228500 980 2735 2 chr4A.!!$R1 1755
2 TraesCS4A01G457400 chr7A 13193148 13195661 2513 True 906.333333 1777 87.044667 810 3117 3 chr7A.!!$R2 2307
3 TraesCS4A01G457400 chr7A 13626040 13627509 1469 True 743.500000 1014 90.521000 1457 2671 2 chr7A.!!$R3 1214
4 TraesCS4A01G457400 chr7A 2997745 2998424 679 False 501.000000 501 80.669000 2404 3063 1 chr7A.!!$F1 659
5 TraesCS4A01G457400 chr7A 3385199 3386199 1000 True 436.500000 459 84.084000 1954 3069 2 chr7A.!!$R1 1115
6 TraesCS4A01G457400 chr7D 13717559 13720620 3061 True 723.350000 1664 89.771750 978 3609 4 chr7D.!!$R1 2631
7 TraesCS4A01G457400 chr7D 13734262 13738805 4543 True 345.000000 534 88.031500 2 1361 2 chr7D.!!$R2 1359

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
930 4138 0.034186 TGCTTCCCCGCATCTTCATT 60.034 50.0 0.0 0.0 34.44 2.57 F
931 4139 0.665298 GCTTCCCCGCATCTTCATTC 59.335 55.0 0.0 0.0 0.00 2.67 F
957 4165 0.765903 TCCTCCTCCAGCCATCCATC 60.766 60.0 0.0 0.0 0.00 3.51 F
1927 5495 0.512952 CGCAGAAAACAGAGAACCCG 59.487 55.0 0.0 0.0 0.00 5.28 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1921 5235 0.108756 GCTGAGGACACTACGGGTTC 60.109 60.000 0.0 0.0 0.00 3.62 R
1922 5236 0.542232 AGCTGAGGACACTACGGGTT 60.542 55.000 0.0 0.0 0.00 4.11 R
2293 5917 1.945394 CGGGAGAAATCAGATTGGCAG 59.055 52.381 0.0 0.0 0.00 4.85 R
3207 6898 0.032416 ACCTACGCCATAGACCCAGT 60.032 55.000 0.0 0.0 31.83 4.00 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
32 33 7.944061 TCAATGGGAATAGAATTACAGCAATG 58.056 34.615 0.00 0.00 0.00 2.82
38 39 3.737559 AGAATTACAGCAATGGACCCA 57.262 42.857 0.00 0.00 0.00 4.51
109 110 8.247562 TCAGCAAAAGTGTGTATTTAAGTGTTT 58.752 29.630 0.00 0.00 0.00 2.83
171 228 5.476599 CCTTCAAAATTGGGTGTATGTGAGA 59.523 40.000 0.00 0.00 0.00 3.27
172 229 5.957842 TCAAAATTGGGTGTATGTGAGAC 57.042 39.130 0.00 0.00 0.00 3.36
174 231 5.473162 TCAAAATTGGGTGTATGTGAGACTG 59.527 40.000 0.00 0.00 0.00 3.51
192 249 4.771054 AGACTGGAACTCTATACCAAACGT 59.229 41.667 0.00 0.00 33.14 3.99
226 283 4.338379 GGAACCTTACCTACTATGCCTG 57.662 50.000 0.00 0.00 0.00 4.85
240 306 5.246307 ACTATGCCTGGTTACTTCTTTGTC 58.754 41.667 0.00 0.00 0.00 3.18
250 316 3.609103 ACTTCTTTGTCATGCGTCAAC 57.391 42.857 0.00 0.00 0.00 3.18
257 323 3.106242 TGTCATGCGTCAACTGTAACT 57.894 42.857 0.00 0.00 0.00 2.24
258 324 3.462982 TGTCATGCGTCAACTGTAACTT 58.537 40.909 0.00 0.00 0.00 2.66
266 332 5.163703 TGCGTCAACTGTAACTTTCAAATGT 60.164 36.000 0.00 0.00 0.00 2.71
267 333 5.741982 GCGTCAACTGTAACTTTCAAATGTT 59.258 36.000 0.54 0.54 0.00 2.71
268 334 6.908284 GCGTCAACTGTAACTTTCAAATGTTA 59.092 34.615 0.00 0.00 0.00 2.41
269 335 7.097168 GCGTCAACTGTAACTTTCAAATGTTAC 60.097 37.037 17.92 17.92 43.87 2.50
273 377 9.233232 CAACTGTAACTTTCAAATGTTACTTCC 57.767 33.333 22.01 6.58 43.91 3.46
276 380 7.857569 TGTAACTTTCAAATGTTACTTCCTCG 58.142 34.615 22.01 0.00 43.91 4.63
285 389 7.881232 TCAAATGTTACTTCCTCGGTTCTTATT 59.119 33.333 0.00 0.00 0.00 1.40
286 390 8.512138 CAAATGTTACTTCCTCGGTTCTTATTT 58.488 33.333 0.00 0.00 0.00 1.40
287 391 8.631480 AATGTTACTTCCTCGGTTCTTATTTT 57.369 30.769 0.00 0.00 0.00 1.82
288 392 7.662604 TGTTACTTCCTCGGTTCTTATTTTC 57.337 36.000 0.00 0.00 0.00 2.29
289 393 7.447594 TGTTACTTCCTCGGTTCTTATTTTCT 58.552 34.615 0.00 0.00 0.00 2.52
290 394 7.386848 TGTTACTTCCTCGGTTCTTATTTTCTG 59.613 37.037 0.00 0.00 0.00 3.02
291 395 5.866207 ACTTCCTCGGTTCTTATTTTCTGT 58.134 37.500 0.00 0.00 0.00 3.41
292 396 6.296803 ACTTCCTCGGTTCTTATTTTCTGTT 58.703 36.000 0.00 0.00 0.00 3.16
293 397 6.771267 ACTTCCTCGGTTCTTATTTTCTGTTT 59.229 34.615 0.00 0.00 0.00 2.83
294 398 7.284716 ACTTCCTCGGTTCTTATTTTCTGTTTT 59.715 33.333 0.00 0.00 0.00 2.43
295 399 8.680039 TTCCTCGGTTCTTATTTTCTGTTTTA 57.320 30.769 0.00 0.00 0.00 1.52
442 548 9.293404 ACTTAAATACCTGAACTTTTTACCCTC 57.707 33.333 0.00 0.00 0.00 4.30
444 550 9.643735 TTAAATACCTGAACTTTTTACCCTCAA 57.356 29.630 0.00 0.00 0.00 3.02
445 551 8.541899 AAATACCTGAACTTTTTACCCTCAAA 57.458 30.769 0.00 0.00 0.00 2.69
446 552 7.761038 ATACCTGAACTTTTTACCCTCAAAG 57.239 36.000 0.00 0.00 36.28 2.77
454 560 7.654022 ACTTTTTACCCTCAAAGATGTGAAA 57.346 32.000 0.00 0.00 34.60 2.69
456 562 9.362151 ACTTTTTACCCTCAAAGATGTGAAATA 57.638 29.630 0.00 0.00 34.60 1.40
524 630 8.606040 TTTCCTCCAAATCATGAAAAATGTTC 57.394 30.769 0.00 0.00 0.00 3.18
580 686 5.462034 TTTGAACTTTTTGAAATGCACCG 57.538 34.783 0.00 0.00 0.00 4.94
604 710 4.661125 TGCTTTTCATATGCACGAACATC 58.339 39.130 0.00 0.00 32.50 3.06
611 717 6.110543 TCATATGCACGAACATCTTTTGAG 57.889 37.500 0.00 0.00 0.00 3.02
612 718 5.643348 TCATATGCACGAACATCTTTTGAGT 59.357 36.000 0.00 0.00 0.00 3.41
613 719 3.878086 TGCACGAACATCTTTTGAGTC 57.122 42.857 0.00 0.00 0.00 3.36
615 721 2.411547 GCACGAACATCTTTTGAGTCCG 60.412 50.000 0.00 0.00 0.00 4.79
616 722 1.798813 ACGAACATCTTTTGAGTCCGC 59.201 47.619 0.00 0.00 0.00 5.54
627 810 1.065358 TGAGTCCGCGAACGATTTTC 58.935 50.000 8.23 0.00 43.93 2.29
636 819 2.413634 GCGAACGATTTTCCAAATCCGT 60.414 45.455 0.00 0.00 0.00 4.69
637 820 3.160545 CGAACGATTTTCCAAATCCGTG 58.839 45.455 0.00 0.00 0.00 4.94
677 860 9.434420 TTTTTCAAGTTTGTGATTTGTCTCAAT 57.566 25.926 0.00 0.00 0.00 2.57
682 865 9.681692 CAAGTTTGTGATTTGTCTCAATTCATA 57.318 29.630 9.25 5.50 0.00 2.15
742 925 6.480981 TCGTGAACTTTTTAAGAAAGGTCGAT 59.519 34.615 16.45 0.00 44.67 3.59
753 936 5.422214 AGAAAGGTCGATGGTAAGTGAAT 57.578 39.130 0.00 0.00 0.00 2.57
755 938 4.553330 AAGGTCGATGGTAAGTGAATGT 57.447 40.909 0.00 0.00 0.00 2.71
801 4009 4.608948 TCTTTTGAGGGAAGTGAGTCTC 57.391 45.455 0.00 0.00 0.00 3.36
811 4019 4.004348 TGAGTCTCTCACCCGAGC 57.996 61.111 0.65 0.00 39.30 5.03
812 4020 2.041115 TGAGTCTCTCACCCGAGCG 61.041 63.158 0.65 0.00 39.30 5.03
813 4021 1.745864 GAGTCTCTCACCCGAGCGA 60.746 63.158 0.00 0.00 39.30 4.93
814 4022 1.711060 GAGTCTCTCACCCGAGCGAG 61.711 65.000 0.00 0.00 39.30 5.03
817 4025 2.669240 TCTCACCCGAGCGAGAGA 59.331 61.111 0.00 0.00 39.30 3.10
818 4026 1.450491 TCTCACCCGAGCGAGAGAG 60.450 63.158 0.00 0.00 39.30 3.20
819 4027 3.119709 CTCACCCGAGCGAGAGAGC 62.120 68.421 0.00 0.00 31.00 4.09
821 4029 4.779966 ACCCGAGCGAGAGAGCGA 62.780 66.667 0.00 0.00 43.00 4.93
827 4035 2.105960 GAGCGAGAGAGCGAGAGAGC 62.106 65.000 0.00 0.00 43.00 4.09
829 4037 2.171079 CGAGAGAGCGAGAGAGCGT 61.171 63.158 0.00 0.00 43.00 5.07
830 4038 0.872451 CGAGAGAGCGAGAGAGCGTA 60.872 60.000 0.00 0.00 43.00 4.42
831 4039 0.580104 GAGAGAGCGAGAGAGCGTAC 59.420 60.000 0.00 0.00 43.00 3.67
832 4040 0.812412 AGAGAGCGAGAGAGCGTACC 60.812 60.000 0.00 0.00 43.00 3.34
833 4041 0.812412 GAGAGCGAGAGAGCGTACCT 60.812 60.000 0.00 0.00 43.00 3.08
836 4044 0.961358 AGCGAGAGAGCGTACCTGTT 60.961 55.000 0.00 0.00 43.00 3.16
837 4045 0.731417 GCGAGAGAGCGTACCTGTTA 59.269 55.000 0.00 0.00 0.00 2.41
841 4049 2.093106 AGAGAGCGTACCTGTTACTGG 58.907 52.381 6.74 6.74 0.00 4.00
842 4050 1.134560 GAGAGCGTACCTGTTACTGGG 59.865 57.143 12.76 3.60 0.00 4.45
843 4051 0.459759 GAGCGTACCTGTTACTGGGC 60.460 60.000 12.76 6.57 0.00 5.36
845 4053 1.153706 CGTACCTGTTACTGGGCCG 60.154 63.158 12.76 9.70 0.00 6.13
847 4055 2.662070 TACCTGTTACTGGGCCGGC 61.662 63.158 21.18 21.18 0.00 6.13
848 4056 4.796495 CCTGTTACTGGGCCGGCC 62.796 72.222 38.57 38.57 0.00 6.13
862 4070 3.640407 GGCCCACAGCAGACCTGA 61.640 66.667 0.47 0.00 44.64 3.86
863 4071 2.359230 GCCCACAGCAGACCTGAC 60.359 66.667 0.47 0.00 44.64 3.51
864 4072 2.047844 CCCACAGCAGACCTGACG 60.048 66.667 0.47 0.00 44.64 4.35
868 4076 4.731612 CAGCAGACCTGACGCGCT 62.732 66.667 5.73 0.00 44.64 5.92
869 4077 3.996124 AGCAGACCTGACGCGCTT 61.996 61.111 5.73 0.00 0.00 4.68
871 4079 1.736645 GCAGACCTGACGCGCTTAA 60.737 57.895 5.73 0.00 0.00 1.85
872 4080 1.289109 GCAGACCTGACGCGCTTAAA 61.289 55.000 5.73 0.00 0.00 1.52
873 4081 1.144969 CAGACCTGACGCGCTTAAAA 58.855 50.000 5.73 0.00 0.00 1.52
874 4082 1.126846 CAGACCTGACGCGCTTAAAAG 59.873 52.381 5.73 0.00 0.00 2.27
875 4083 0.442699 GACCTGACGCGCTTAAAAGG 59.557 55.000 5.73 7.02 0.00 3.11
876 4084 1.134694 CCTGACGCGCTTAAAAGGC 59.865 57.895 5.73 0.00 0.00 4.35
887 4095 2.414691 GCTTAAAAGGCGCTGAAGAAGG 60.415 50.000 7.64 0.00 0.00 3.46
893 4101 3.882025 CGCTGAAGAAGGGCTGTC 58.118 61.111 0.00 0.00 31.26 3.51
895 4103 2.394563 GCTGAAGAAGGGCTGTCGC 61.395 63.158 0.00 0.00 0.00 5.19
896 4104 1.004560 CTGAAGAAGGGCTGTCGCA 60.005 57.895 0.00 0.00 38.10 5.10
899 4107 0.603975 GAAGAAGGGCTGTCGCAACT 60.604 55.000 0.00 0.00 38.10 3.16
903 4111 0.320771 AAGGGCTGTCGCAACTACTG 60.321 55.000 0.00 0.00 38.10 2.74
904 4112 1.741770 GGGCTGTCGCAACTACTGG 60.742 63.158 0.00 0.00 38.10 4.00
905 4113 2.391389 GGCTGTCGCAACTACTGGC 61.391 63.158 0.00 0.00 38.10 4.85
906 4114 2.391389 GCTGTCGCAACTACTGGCC 61.391 63.158 0.00 0.00 35.78 5.36
907 4115 1.741770 CTGTCGCAACTACTGGCCC 60.742 63.158 0.00 0.00 0.00 5.80
908 4116 2.345991 GTCGCAACTACTGGCCCA 59.654 61.111 0.00 0.00 0.00 5.36
909 4117 1.302192 GTCGCAACTACTGGCCCAA 60.302 57.895 0.00 0.00 0.00 4.12
911 4119 1.302511 CGCAACTACTGGCCCAACT 60.303 57.895 0.00 0.00 0.00 3.16
912 4120 1.577328 CGCAACTACTGGCCCAACTG 61.577 60.000 0.00 0.00 0.00 3.16
915 4123 0.478507 AACTACTGGCCCAACTGCTT 59.521 50.000 0.00 0.00 0.00 3.91
917 4125 0.678048 CTACTGGCCCAACTGCTTCC 60.678 60.000 0.00 0.00 0.00 3.46
918 4126 2.137177 TACTGGCCCAACTGCTTCCC 62.137 60.000 0.00 0.00 0.00 3.97
922 4130 4.659172 CCCAACTGCTTCCCCGCA 62.659 66.667 0.00 0.00 38.40 5.69
923 4131 2.361610 CCAACTGCTTCCCCGCAT 60.362 61.111 0.00 0.00 39.52 4.73
925 4133 1.377725 CAACTGCTTCCCCGCATCT 60.378 57.895 0.00 0.00 39.52 2.90
926 4134 0.962356 CAACTGCTTCCCCGCATCTT 60.962 55.000 0.00 0.00 39.52 2.40
928 4136 1.078214 CTGCTTCCCCGCATCTTCA 60.078 57.895 0.00 0.00 39.52 3.02
930 4138 0.034186 TGCTTCCCCGCATCTTCATT 60.034 50.000 0.00 0.00 34.44 2.57
931 4139 0.665298 GCTTCCCCGCATCTTCATTC 59.335 55.000 0.00 0.00 0.00 2.67
932 4140 2.018644 GCTTCCCCGCATCTTCATTCA 61.019 52.381 0.00 0.00 0.00 2.57
933 4141 1.945394 CTTCCCCGCATCTTCATTCAG 59.055 52.381 0.00 0.00 0.00 3.02
935 4143 1.450531 CCCCGCATCTTCATTCAGCC 61.451 60.000 0.00 0.00 0.00 4.85
936 4144 1.450531 CCCGCATCTTCATTCAGCCC 61.451 60.000 0.00 0.00 0.00 5.19
937 4145 1.645455 CGCATCTTCATTCAGCCCG 59.355 57.895 0.00 0.00 0.00 6.13
938 4146 1.091771 CGCATCTTCATTCAGCCCGT 61.092 55.000 0.00 0.00 0.00 5.28
947 4155 2.822643 ATTCAGCCCGTCCTCCTCCA 62.823 60.000 0.00 0.00 0.00 3.86
948 4156 3.465403 CAGCCCGTCCTCCTCCAG 61.465 72.222 0.00 0.00 0.00 3.86
954 4162 2.801631 CGTCCTCCTCCAGCCATCC 61.802 68.421 0.00 0.00 0.00 3.51
955 4163 1.690633 GTCCTCCTCCAGCCATCCA 60.691 63.158 0.00 0.00 0.00 3.41
956 4164 1.059006 GTCCTCCTCCAGCCATCCAT 61.059 60.000 0.00 0.00 0.00 3.41
957 4165 0.765903 TCCTCCTCCAGCCATCCATC 60.766 60.000 0.00 0.00 0.00 3.51
958 4166 1.759881 CTCCTCCAGCCATCCATCC 59.240 63.158 0.00 0.00 0.00 3.51
959 4167 1.004626 TCCTCCAGCCATCCATCCA 59.995 57.895 0.00 0.00 0.00 3.41
961 4169 1.150081 CTCCAGCCATCCATCCACC 59.850 63.158 0.00 0.00 0.00 4.61
962 4170 1.619057 TCCAGCCATCCATCCACCA 60.619 57.895 0.00 0.00 0.00 4.17
963 4171 0.995132 TCCAGCCATCCATCCACCAT 60.995 55.000 0.00 0.00 0.00 3.55
967 4175 1.073722 CCATCCATCCACCATCCCG 59.926 63.158 0.00 0.00 0.00 5.14
968 4176 1.601759 CATCCATCCACCATCCCGC 60.602 63.158 0.00 0.00 0.00 6.13
970 4178 4.935495 CCATCCACCATCCCGCCG 62.935 72.222 0.00 0.00 0.00 6.46
971 4179 4.935495 CATCCACCATCCCGCCGG 62.935 72.222 0.00 0.00 0.00 6.13
1092 4350 1.036707 CTCCGATTCCTCCTCTCCAC 58.963 60.000 0.00 0.00 0.00 4.02
1226 4503 5.220228 CGATTTTCCTAGCACTTTGTAGACG 60.220 44.000 0.00 0.00 0.00 4.18
1294 4571 3.095102 ACTCATCAGTCATCAGCATCG 57.905 47.619 0.00 0.00 0.00 3.84
1341 4618 6.211584 TCATGAACTAGCTAGGTTCTTTGAGT 59.788 38.462 24.35 0.00 42.27 3.41
1377 4655 1.139058 ACTAGCCACTTGGATAAGCGG 59.861 52.381 0.00 0.00 38.80 5.52
1393 4671 2.062636 AGCGGGGTGGATAAATACCAT 58.937 47.619 0.00 0.00 39.69 3.55
1396 4674 3.244630 GCGGGGTGGATAAATACCATGTA 60.245 47.826 0.00 0.00 39.69 2.29
1441 4719 1.461512 CGCACAATGTTAGTTACGGCA 59.538 47.619 0.00 0.00 0.00 5.69
1476 4760 6.170506 TCTATGAGCACCGTTCTTGTATTTT 58.829 36.000 0.00 0.00 0.00 1.82
1477 4761 4.481930 TGAGCACCGTTCTTGTATTTTG 57.518 40.909 0.00 0.00 0.00 2.44
1492 4776 8.522830 TCTTGTATTTTGATGATCTTGGGAAAC 58.477 33.333 0.00 0.00 0.00 2.78
1503 4787 2.076863 CTTGGGAAACGGCTAGTTCTG 58.923 52.381 0.00 0.00 43.37 3.02
1523 4807 1.160137 GTGCACTGTTCCACTGGATC 58.840 55.000 10.32 0.00 0.00 3.36
1527 4811 2.898705 CACTGTTCCACTGGATCTAGC 58.101 52.381 5.91 0.00 0.00 3.42
1582 4874 1.303806 GTTGTGCCCCGGGTGTTAT 60.304 57.895 21.85 0.00 0.00 1.89
1588 4880 1.142060 TGCCCCGGGTGTTATATTGAG 59.858 52.381 21.85 0.00 0.00 3.02
1595 4887 2.224793 GGGTGTTATATTGAGGAGGGGC 60.225 54.545 0.00 0.00 0.00 5.80
1667 4961 2.912956 TGCTTCTGAACTATGAACCCCT 59.087 45.455 0.00 0.00 0.00 4.79
1670 4964 4.767409 GCTTCTGAACTATGAACCCCTTTT 59.233 41.667 0.00 0.00 0.00 2.27
1698 5001 8.281212 ACCATGTTACCTGATACTGATTTTTC 57.719 34.615 0.00 0.00 0.00 2.29
1699 5002 8.109634 ACCATGTTACCTGATACTGATTTTTCT 58.890 33.333 0.00 0.00 0.00 2.52
1700 5003 8.960591 CCATGTTACCTGATACTGATTTTTCTT 58.039 33.333 0.00 0.00 0.00 2.52
1701 5004 9.994432 CATGTTACCTGATACTGATTTTTCTTC 57.006 33.333 0.00 0.00 0.00 2.87
1743 5051 5.669477 TGTAAATGCCATGCTTTTAATCCC 58.331 37.500 8.23 0.00 38.94 3.85
1767 5077 6.410222 TCAAATAAAATGTCCCTTCCCCTA 57.590 37.500 0.00 0.00 0.00 3.53
1790 5100 1.027255 CGACCTCTCGCTTCCTCTGA 61.027 60.000 0.00 0.00 31.91 3.27
1800 5110 1.002430 GCTTCCTCTGATGGACACACA 59.998 52.381 0.00 0.00 35.58 3.72
1876 5190 7.775053 AACAGAGAAAACAGAGTAGAGAGAT 57.225 36.000 0.00 0.00 0.00 2.75
1888 5202 9.106977 ACAGAGTAGAGAGATACCAGATATGTA 57.893 37.037 0.00 0.00 0.00 2.29
1889 5203 9.599866 CAGAGTAGAGAGATACCAGATATGTAG 57.400 40.741 0.00 0.00 0.00 2.74
1890 5204 9.555411 AGAGTAGAGAGATACCAGATATGTAGA 57.445 37.037 0.00 0.00 0.00 2.59
1902 5216 8.601047 ACCAGATATGTAGATATGTATGCACT 57.399 34.615 0.00 0.00 0.00 4.40
1904 5218 9.881649 CCAGATATGTAGATATGTATGCACTTT 57.118 33.333 0.00 0.00 0.00 2.66
1909 5223 7.463469 TGTAGATATGTATGCACTTTTCACG 57.537 36.000 0.00 0.00 0.00 4.35
1910 5224 5.409643 AGATATGTATGCACTTTTCACGC 57.590 39.130 0.00 0.00 0.00 5.34
1911 5225 4.875536 AGATATGTATGCACTTTTCACGCA 59.124 37.500 0.00 0.00 40.50 5.24
1912 5226 2.967459 TGTATGCACTTTTCACGCAG 57.033 45.000 0.00 0.00 39.39 5.18
1913 5227 2.488952 TGTATGCACTTTTCACGCAGA 58.511 42.857 0.00 0.00 39.39 4.26
1914 5228 2.875317 TGTATGCACTTTTCACGCAGAA 59.125 40.909 0.00 0.00 39.39 3.02
1915 5229 3.313803 TGTATGCACTTTTCACGCAGAAA 59.686 39.130 0.00 0.00 44.21 2.52
1927 5495 0.512952 CGCAGAAAACAGAGAACCCG 59.487 55.000 0.00 0.00 0.00 5.28
1944 5512 1.107114 CCGTAGTGTCCTCAGCTGAT 58.893 55.000 18.63 3.37 0.00 2.90
1945 5513 1.478510 CCGTAGTGTCCTCAGCTGATT 59.521 52.381 18.63 1.84 0.00 2.57
1946 5514 2.534298 CGTAGTGTCCTCAGCTGATTG 58.466 52.381 18.63 11.89 0.00 2.67
2293 5917 1.290134 AGTGATTCCCCTGGTCCTTC 58.710 55.000 0.00 0.00 0.00 3.46
2465 6089 6.016276 GGAAATACTGAGTTTTGCTCTTTGGA 60.016 38.462 0.00 0.00 44.41 3.53
2491 6115 4.091655 GCTTTACAGAGACGGTTTAAGAGC 59.908 45.833 0.00 0.00 0.00 4.09
2533 6161 1.630878 GGGATTAGATGCTACAGGGGG 59.369 57.143 0.00 0.00 0.00 5.40
2615 6243 2.174360 GCAAGGAAAAGAGGGCTTGAT 58.826 47.619 0.00 0.00 33.79 2.57
2710 6367 2.495084 TGTTTGTACTGCATTACCGCA 58.505 42.857 11.29 5.36 40.32 5.69
2726 6383 2.490903 ACCGCACTACTGTTAATCGACT 59.509 45.455 0.00 0.00 0.00 4.18
2737 6394 5.803967 ACTGTTAATCGACTGTTAATCCGAC 59.196 40.000 0.00 0.00 33.69 4.79
2763 6420 1.990060 GCTAGGTGTCTCCCAGCCA 60.990 63.158 0.34 0.00 43.47 4.75
2785 6443 2.678190 GCCTCTGCTGTACTTTCCGAAT 60.678 50.000 0.00 0.00 33.53 3.34
2786 6444 2.932614 CCTCTGCTGTACTTTCCGAATG 59.067 50.000 0.00 0.00 0.00 2.67
2886 6569 9.394477 GTCGCACAGTTTATTTCTTTCTTATTT 57.606 29.630 0.00 0.00 0.00 1.40
2902 6585 6.584471 TCTTATTTGGCTATTTCCTACCCA 57.416 37.500 0.00 0.00 0.00 4.51
2916 6601 5.039920 TCCTACCCATATATGATGCATGC 57.960 43.478 11.82 11.82 0.00 4.06
2996 6683 1.630126 ATCTGTGCCACTAGCCCTGG 61.630 60.000 0.00 0.00 42.71 4.45
2998 6685 2.045926 GTGCCACTAGCCCTGGTG 60.046 66.667 4.96 4.96 42.71 4.17
3000 6687 2.045926 GCCACTAGCCCTGGTGTG 60.046 66.667 10.29 4.18 39.97 3.82
3016 6703 2.384828 GTGTGTTCCCTTTGGTTCCTT 58.615 47.619 0.00 0.00 0.00 3.36
3017 6704 3.558033 GTGTGTTCCCTTTGGTTCCTTA 58.442 45.455 0.00 0.00 0.00 2.69
3125 6816 9.859152 TCTGTATGATATGATATACTCCCTCTG 57.141 37.037 0.00 0.00 32.37 3.35
3126 6817 9.639563 CTGTATGATATGATATACTCCCTCTGT 57.360 37.037 0.00 0.00 32.37 3.41
3127 6818 9.634021 TGTATGATATGATATACTCCCTCTGTC 57.366 37.037 0.00 0.00 32.37 3.51
3128 6819 9.073475 GTATGATATGATATACTCCCTCTGTCC 57.927 40.741 0.00 0.00 0.00 4.02
3129 6820 6.436027 TGATATGATATACTCCCTCTGTCCC 58.564 44.000 0.00 0.00 0.00 4.46
3130 6821 4.767000 ATGATATACTCCCTCTGTCCCA 57.233 45.455 0.00 0.00 0.00 4.37
3131 6822 4.552883 TGATATACTCCCTCTGTCCCAA 57.447 45.455 0.00 0.00 0.00 4.12
3132 6823 4.890988 TGATATACTCCCTCTGTCCCAAA 58.109 43.478 0.00 0.00 0.00 3.28
3133 6824 5.285401 TGATATACTCCCTCTGTCCCAAAA 58.715 41.667 0.00 0.00 0.00 2.44
3134 6825 5.911178 TGATATACTCCCTCTGTCCCAAAAT 59.089 40.000 0.00 0.00 0.00 1.82
3135 6826 6.389869 TGATATACTCCCTCTGTCCCAAAATT 59.610 38.462 0.00 0.00 0.00 1.82
3136 6827 3.441500 ACTCCCTCTGTCCCAAAATTC 57.558 47.619 0.00 0.00 0.00 2.17
3137 6828 2.989571 ACTCCCTCTGTCCCAAAATTCT 59.010 45.455 0.00 0.00 0.00 2.40
3138 6829 3.399305 ACTCCCTCTGTCCCAAAATTCTT 59.601 43.478 0.00 0.00 0.00 2.52
3139 6830 3.760684 CTCCCTCTGTCCCAAAATTCTTG 59.239 47.826 0.00 0.00 0.00 3.02
3140 6831 3.140144 TCCCTCTGTCCCAAAATTCTTGT 59.860 43.478 0.00 0.00 0.00 3.16
3141 6832 3.507622 CCCTCTGTCCCAAAATTCTTGTC 59.492 47.826 0.00 0.00 0.00 3.18
3142 6833 4.401925 CCTCTGTCCCAAAATTCTTGTCT 58.598 43.478 0.00 0.00 0.00 3.41
3143 6834 4.829492 CCTCTGTCCCAAAATTCTTGTCTT 59.171 41.667 0.00 0.00 0.00 3.01
3144 6835 6.003950 CCTCTGTCCCAAAATTCTTGTCTTA 58.996 40.000 0.00 0.00 0.00 2.10
3145 6836 6.150140 CCTCTGTCCCAAAATTCTTGTCTTAG 59.850 42.308 0.00 0.00 0.00 2.18
3146 6837 6.837312 TCTGTCCCAAAATTCTTGTCTTAGA 58.163 36.000 0.00 0.00 0.00 2.10
3147 6838 7.461749 TCTGTCCCAAAATTCTTGTCTTAGAT 58.538 34.615 0.00 0.00 0.00 1.98
3148 6839 7.944554 TCTGTCCCAAAATTCTTGTCTTAGATT 59.055 33.333 0.00 0.00 0.00 2.40
3149 6840 8.110860 TGTCCCAAAATTCTTGTCTTAGATTC 57.889 34.615 0.00 0.00 0.00 2.52
3150 6841 7.094805 TGTCCCAAAATTCTTGTCTTAGATTCG 60.095 37.037 0.00 0.00 0.00 3.34
3151 6842 6.030228 CCCAAAATTCTTGTCTTAGATTCGC 58.970 40.000 0.00 0.00 0.00 4.70
3152 6843 6.030228 CCAAAATTCTTGTCTTAGATTCGCC 58.970 40.000 0.00 0.00 0.00 5.54
3153 6844 6.127897 CCAAAATTCTTGTCTTAGATTCGCCT 60.128 38.462 0.00 0.00 0.00 5.52
3154 6845 7.065803 CCAAAATTCTTGTCTTAGATTCGCCTA 59.934 37.037 0.00 0.00 0.00 3.93
3155 6846 7.778470 AAATTCTTGTCTTAGATTCGCCTAG 57.222 36.000 0.00 0.00 0.00 3.02
3156 6847 6.716934 ATTCTTGTCTTAGATTCGCCTAGA 57.283 37.500 0.00 0.00 0.00 2.43
3157 6848 6.716934 TTCTTGTCTTAGATTCGCCTAGAT 57.283 37.500 0.00 0.00 0.00 1.98
3158 6849 7.818997 TTCTTGTCTTAGATTCGCCTAGATA 57.181 36.000 0.00 0.00 0.00 1.98
3159 6850 7.204496 TCTTGTCTTAGATTCGCCTAGATAC 57.796 40.000 0.00 0.00 0.00 2.24
3160 6851 5.608676 TGTCTTAGATTCGCCTAGATACG 57.391 43.478 0.00 0.00 0.00 3.06
3161 6852 4.454847 TGTCTTAGATTCGCCTAGATACGG 59.545 45.833 0.00 0.00 0.00 4.02
3162 6853 4.694509 GTCTTAGATTCGCCTAGATACGGA 59.305 45.833 0.00 0.00 0.00 4.69
3163 6854 5.354792 GTCTTAGATTCGCCTAGATACGGAT 59.645 44.000 0.00 0.00 0.00 4.18
3164 6855 5.354513 TCTTAGATTCGCCTAGATACGGATG 59.645 44.000 0.00 0.00 0.00 3.51
3165 6856 3.422796 AGATTCGCCTAGATACGGATGT 58.577 45.455 0.00 0.00 0.00 3.06
3166 6857 4.586884 AGATTCGCCTAGATACGGATGTA 58.413 43.478 0.00 0.00 34.45 2.29
3167 6858 5.194432 AGATTCGCCTAGATACGGATGTAT 58.806 41.667 0.00 0.00 43.97 2.29
3196 6887 9.449719 AATACTAAAATGTGACTTTGGTAGGAG 57.550 33.333 1.46 0.00 34.49 3.69
3197 6888 5.705905 ACTAAAATGTGACTTTGGTAGGAGC 59.294 40.000 6.95 0.00 0.00 4.70
3198 6889 4.373156 AAATGTGACTTTGGTAGGAGCT 57.627 40.909 0.00 0.00 0.00 4.09
3199 6890 2.839486 TGTGACTTTGGTAGGAGCTG 57.161 50.000 0.00 0.00 0.00 4.24
3200 6891 1.347707 TGTGACTTTGGTAGGAGCTGG 59.652 52.381 0.00 0.00 0.00 4.85
3201 6892 0.984230 TGACTTTGGTAGGAGCTGGG 59.016 55.000 0.00 0.00 0.00 4.45
3202 6893 1.276622 GACTTTGGTAGGAGCTGGGA 58.723 55.000 0.00 0.00 0.00 4.37
3203 6894 0.984995 ACTTTGGTAGGAGCTGGGAC 59.015 55.000 0.00 0.00 0.00 4.46
3204 6895 0.253327 CTTTGGTAGGAGCTGGGACC 59.747 60.000 0.00 0.00 0.00 4.46
3205 6896 1.205460 TTTGGTAGGAGCTGGGACCC 61.205 60.000 2.45 2.45 0.00 4.46
3206 6897 2.119847 TTGGTAGGAGCTGGGACCCT 62.120 60.000 13.00 0.00 0.00 4.34
3207 6898 1.226104 TGGTAGGAGCTGGGACCCTA 61.226 60.000 13.00 0.00 0.00 3.53
3208 6899 2.823587 GTAGGAGCTGGGACCCTAC 58.176 63.158 13.00 11.60 43.66 3.18
3209 6900 0.262285 GTAGGAGCTGGGACCCTACT 59.738 60.000 17.34 8.93 45.47 2.57
3210 6901 0.261991 TAGGAGCTGGGACCCTACTG 59.738 60.000 13.00 0.59 0.00 2.74
3211 6902 2.066999 GGAGCTGGGACCCTACTGG 61.067 68.421 13.00 0.00 41.37 4.00
3222 6913 2.822215 CCTACTGGGTCTATGGCGT 58.178 57.895 0.00 0.00 0.00 5.68
3223 6914 1.991121 CCTACTGGGTCTATGGCGTA 58.009 55.000 0.00 0.00 0.00 4.42
3224 6915 1.887198 CCTACTGGGTCTATGGCGTAG 59.113 57.143 7.45 7.45 0.00 3.51
3225 6916 1.887198 CTACTGGGTCTATGGCGTAGG 59.113 57.143 13.58 0.12 0.00 3.18
3226 6917 0.032416 ACTGGGTCTATGGCGTAGGT 60.032 55.000 13.58 0.74 0.00 3.08
3227 6918 1.120530 CTGGGTCTATGGCGTAGGTT 58.879 55.000 13.58 0.00 0.00 3.50
3228 6919 0.828022 TGGGTCTATGGCGTAGGTTG 59.172 55.000 13.58 0.00 0.00 3.77
3229 6920 0.828677 GGGTCTATGGCGTAGGTTGT 59.171 55.000 13.58 0.00 0.00 3.32
3230 6921 2.034124 GGGTCTATGGCGTAGGTTGTA 58.966 52.381 13.58 0.00 0.00 2.41
3231 6922 2.035576 GGGTCTATGGCGTAGGTTGTAG 59.964 54.545 13.58 0.00 0.00 2.74
3232 6923 2.035576 GGTCTATGGCGTAGGTTGTAGG 59.964 54.545 13.58 0.00 0.00 3.18
3233 6924 2.035576 GTCTATGGCGTAGGTTGTAGGG 59.964 54.545 13.58 0.00 0.00 3.53
3234 6925 1.343465 CTATGGCGTAGGTTGTAGGGG 59.657 57.143 5.81 0.00 0.00 4.79
3235 6926 0.325860 ATGGCGTAGGTTGTAGGGGA 60.326 55.000 0.00 0.00 0.00 4.81
3236 6927 0.544833 TGGCGTAGGTTGTAGGGGAA 60.545 55.000 0.00 0.00 0.00 3.97
3237 6928 0.177373 GGCGTAGGTTGTAGGGGAAG 59.823 60.000 0.00 0.00 0.00 3.46
3238 6929 0.177373 GCGTAGGTTGTAGGGGAAGG 59.823 60.000 0.00 0.00 0.00 3.46
3239 6930 1.856629 CGTAGGTTGTAGGGGAAGGA 58.143 55.000 0.00 0.00 0.00 3.36
3240 6931 1.755380 CGTAGGTTGTAGGGGAAGGAG 59.245 57.143 0.00 0.00 0.00 3.69
3241 6932 2.117051 GTAGGTTGTAGGGGAAGGAGG 58.883 57.143 0.00 0.00 0.00 4.30
3242 6933 0.253207 AGGTTGTAGGGGAAGGAGGG 60.253 60.000 0.00 0.00 0.00 4.30
3243 6934 1.279749 GGTTGTAGGGGAAGGAGGGG 61.280 65.000 0.00 0.00 0.00 4.79
3244 6935 1.084084 TTGTAGGGGAAGGAGGGGG 59.916 63.158 0.00 0.00 0.00 5.40
3245 6936 2.773053 GTAGGGGAAGGAGGGGGC 60.773 72.222 0.00 0.00 0.00 5.80
3246 6937 2.964632 TAGGGGAAGGAGGGGGCT 60.965 66.667 0.00 0.00 0.00 5.19
3247 6938 3.347562 TAGGGGAAGGAGGGGGCTG 62.348 68.421 0.00 0.00 0.00 4.85
3249 6940 4.760220 GGGAAGGAGGGGGCTGGA 62.760 72.222 0.00 0.00 0.00 3.86
3250 6941 3.412408 GGAAGGAGGGGGCTGGAC 61.412 72.222 0.00 0.00 0.00 4.02
3251 6942 3.787001 GAAGGAGGGGGCTGGACG 61.787 72.222 0.00 0.00 0.00 4.79
3252 6943 4.658786 AAGGAGGGGGCTGGACGT 62.659 66.667 0.00 0.00 0.00 4.34
3292 6983 4.423231 GGCAGGGCCCTAATATGC 57.577 61.111 28.13 24.38 44.06 3.14
3297 6988 4.716003 GGCCCTAATATGCCGGTC 57.284 61.111 1.90 0.00 38.00 4.79
3298 6989 1.758592 GGCCCTAATATGCCGGTCA 59.241 57.895 1.90 1.38 38.00 4.02
3299 6990 0.328258 GGCCCTAATATGCCGGTCAT 59.672 55.000 14.43 14.43 38.00 3.06
3300 6991 1.557832 GGCCCTAATATGCCGGTCATA 59.442 52.381 17.22 17.22 41.52 2.15
3301 6992 2.026636 GGCCCTAATATGCCGGTCATAA 60.027 50.000 18.34 6.45 40.73 1.90
3302 6993 3.007635 GCCCTAATATGCCGGTCATAAC 58.992 50.000 18.34 0.00 40.73 1.89
3303 6994 3.558321 GCCCTAATATGCCGGTCATAACA 60.558 47.826 18.34 10.64 40.73 2.41
3304 6995 4.253685 CCCTAATATGCCGGTCATAACAG 58.746 47.826 18.34 16.69 40.73 3.16
3305 6996 4.020573 CCCTAATATGCCGGTCATAACAGA 60.021 45.833 18.34 0.00 40.73 3.41
3306 6997 4.929808 CCTAATATGCCGGTCATAACAGAC 59.070 45.833 18.34 0.00 40.73 3.51
3307 6998 4.689612 AATATGCCGGTCATAACAGACT 57.310 40.909 18.34 3.23 40.73 3.24
3308 6999 4.689612 ATATGCCGGTCATAACAGACTT 57.310 40.909 18.34 2.67 40.73 3.01
3309 7000 2.093306 TGCCGGTCATAACAGACTTG 57.907 50.000 1.90 0.00 38.57 3.16
3310 7001 1.621317 TGCCGGTCATAACAGACTTGA 59.379 47.619 1.90 0.00 38.57 3.02
3311 7002 2.236146 TGCCGGTCATAACAGACTTGAT 59.764 45.455 1.90 0.00 38.57 2.57
3312 7003 3.449377 TGCCGGTCATAACAGACTTGATA 59.551 43.478 1.90 0.00 38.57 2.15
3313 7004 3.802685 GCCGGTCATAACAGACTTGATAC 59.197 47.826 1.90 0.00 38.57 2.24
3314 7005 4.679639 GCCGGTCATAACAGACTTGATACA 60.680 45.833 1.90 0.00 38.57 2.29
3315 7006 5.416083 CCGGTCATAACAGACTTGATACAA 58.584 41.667 0.00 0.00 38.57 2.41
3316 7007 5.291128 CCGGTCATAACAGACTTGATACAAC 59.709 44.000 0.00 0.00 38.57 3.32
3317 7008 5.291128 CGGTCATAACAGACTTGATACAACC 59.709 44.000 0.00 0.00 38.57 3.77
3318 7009 5.291128 GGTCATAACAGACTTGATACAACCG 59.709 44.000 0.00 0.00 38.57 4.44
3319 7010 5.867716 GTCATAACAGACTTGATACAACCGT 59.132 40.000 0.00 0.00 35.65 4.83
3320 7011 7.031372 GTCATAACAGACTTGATACAACCGTA 58.969 38.462 0.00 0.00 35.65 4.02
3321 7012 7.705325 GTCATAACAGACTTGATACAACCGTAT 59.295 37.037 0.00 0.00 37.01 3.06
3322 7013 8.255206 TCATAACAGACTTGATACAACCGTATT 58.745 33.333 0.00 0.00 38.48 1.89
3323 7014 8.879759 CATAACAGACTTGATACAACCGTATTT 58.120 33.333 0.00 0.00 38.48 1.40
3325 7016 8.475331 AACAGACTTGATACAACCGTATTTAG 57.525 34.615 0.00 0.00 38.48 1.85
3326 7017 7.833786 ACAGACTTGATACAACCGTATTTAGA 58.166 34.615 0.00 0.00 38.48 2.10
3327 7018 7.758528 ACAGACTTGATACAACCGTATTTAGAC 59.241 37.037 0.00 0.00 38.48 2.59
3328 7019 7.758076 CAGACTTGATACAACCGTATTTAGACA 59.242 37.037 0.00 0.00 38.48 3.41
3329 7020 8.308931 AGACTTGATACAACCGTATTTAGACAA 58.691 33.333 0.00 0.00 38.48 3.18
3330 7021 8.836268 ACTTGATACAACCGTATTTAGACAAA 57.164 30.769 0.00 0.00 38.48 2.83
3331 7022 9.444600 ACTTGATACAACCGTATTTAGACAAAT 57.555 29.630 0.00 0.00 38.48 2.32
3350 7041 9.546428 AGACAAATTTAAGACAAGAATTTTGGG 57.454 29.630 0.00 0.00 33.39 4.12
3351 7042 9.541143 GACAAATTTAAGACAAGAATTTTGGGA 57.459 29.630 0.00 0.00 33.39 4.37
3352 7043 9.325198 ACAAATTTAAGACAAGAATTTTGGGAC 57.675 29.630 0.00 0.00 33.39 4.46
3353 7044 8.487176 CAAATTTAAGACAAGAATTTTGGGACG 58.513 33.333 0.00 0.00 32.35 4.79
3354 7045 5.699097 TTAAGACAAGAATTTTGGGACGG 57.301 39.130 0.00 0.00 0.00 4.79
3355 7046 3.502123 AGACAAGAATTTTGGGACGGA 57.498 42.857 0.00 0.00 0.00 4.69
3356 7047 3.412386 AGACAAGAATTTTGGGACGGAG 58.588 45.455 0.00 0.00 0.00 4.63
3357 7048 2.488153 GACAAGAATTTTGGGACGGAGG 59.512 50.000 0.00 0.00 0.00 4.30
3358 7049 1.818674 CAAGAATTTTGGGACGGAGGG 59.181 52.381 0.00 0.00 0.00 4.30
3359 7050 1.368374 AGAATTTTGGGACGGAGGGA 58.632 50.000 0.00 0.00 0.00 4.20
3360 7051 1.282157 AGAATTTTGGGACGGAGGGAG 59.718 52.381 0.00 0.00 0.00 4.30
3370 7061 3.294214 GGACGGAGGGAGTAAGATTGTA 58.706 50.000 0.00 0.00 0.00 2.41
3391 7082 9.621629 ATTGTATTTCGAACATATTGGGTCTTA 57.378 29.630 0.00 0.00 0.00 2.10
3431 7122 8.870075 ATTCTTACCTTAACAAAATCAGCTCT 57.130 30.769 0.00 0.00 0.00 4.09
3437 7128 2.206576 ACAAAATCAGCTCTGGTCCC 57.793 50.000 0.00 0.00 0.00 4.46
3462 7153 5.762218 AGCTATGCTTTTGTATCATCAGACC 59.238 40.000 0.00 0.00 33.89 3.85
3463 7154 5.762218 GCTATGCTTTTGTATCATCAGACCT 59.238 40.000 0.00 0.00 0.00 3.85
3464 7155 6.261826 GCTATGCTTTTGTATCATCAGACCTT 59.738 38.462 0.00 0.00 0.00 3.50
3465 7156 7.442364 GCTATGCTTTTGTATCATCAGACCTTA 59.558 37.037 0.00 0.00 0.00 2.69
3466 7157 9.330063 CTATGCTTTTGTATCATCAGACCTTAA 57.670 33.333 0.00 0.00 0.00 1.85
3487 7193 4.173036 ACAAGAGTGTTGTGGTTTGTTG 57.827 40.909 4.61 0.00 32.58 3.33
3490 7196 3.686016 AGAGTGTTGTGGTTTGTTGAGT 58.314 40.909 0.00 0.00 0.00 3.41
3492 7198 3.153919 AGTGTTGTGGTTTGTTGAGTGT 58.846 40.909 0.00 0.00 0.00 3.55
3520 7226 7.761249 TGGTCAGATAAAGTCATATATGCATCG 59.239 37.037 0.19 0.00 0.00 3.84
3535 7241 1.064060 GCATCGGGTGTGCTGTATTTC 59.936 52.381 0.00 0.00 39.45 2.17
3536 7242 1.670811 CATCGGGTGTGCTGTATTTCC 59.329 52.381 0.00 0.00 0.00 3.13
3537 7243 0.981183 TCGGGTGTGCTGTATTTCCT 59.019 50.000 0.00 0.00 0.00 3.36
3538 7244 1.349688 TCGGGTGTGCTGTATTTCCTT 59.650 47.619 0.00 0.00 0.00 3.36
3539 7245 1.737793 CGGGTGTGCTGTATTTCCTTC 59.262 52.381 0.00 0.00 0.00 3.46
3540 7246 2.790433 GGGTGTGCTGTATTTCCTTCA 58.210 47.619 0.00 0.00 0.00 3.02
3541 7247 2.749621 GGGTGTGCTGTATTTCCTTCAG 59.250 50.000 0.00 0.00 0.00 3.02
3564 7270 3.826236 CATCTCAACAGAAGGTGCAAG 57.174 47.619 0.00 0.00 30.24 4.01
3566 7272 2.838736 TCTCAACAGAAGGTGCAAGTC 58.161 47.619 0.00 0.00 0.00 3.01
3580 7286 2.309755 TGCAAGTCAAGGGGAAGATCAT 59.690 45.455 0.00 0.00 0.00 2.45
3592 7298 4.314121 GGGAAGATCATATCACAGCAGAC 58.686 47.826 0.00 0.00 0.00 3.51
3612 7318 3.171987 CGAGCTCATGCGCAAGTT 58.828 55.556 17.11 6.07 45.42 2.66
3613 7319 1.499056 CGAGCTCATGCGCAAGTTT 59.501 52.632 17.11 0.60 45.42 2.66
3614 7320 0.721154 CGAGCTCATGCGCAAGTTTA 59.279 50.000 17.11 0.00 45.42 2.01
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
9 10 7.014615 GTCCATTGCTGTAATTCTATTCCCATT 59.985 37.037 0.00 0.00 0.00 3.16
14 15 5.827797 TGGGTCCATTGCTGTAATTCTATTC 59.172 40.000 0.00 0.00 0.00 1.75
15 16 5.765510 TGGGTCCATTGCTGTAATTCTATT 58.234 37.500 0.00 0.00 0.00 1.73
32 33 0.535335 TATGCGAGTCACTTGGGTCC 59.465 55.000 0.00 0.00 0.00 4.46
38 39 8.942338 TGAGTATTTTTATATGCGAGTCACTT 57.058 30.769 0.00 0.00 0.00 3.16
157 214 2.301870 GTTCCAGTCTCACATACACCCA 59.698 50.000 0.00 0.00 0.00 4.51
161 218 6.546403 GGTATAGAGTTCCAGTCTCACATACA 59.454 42.308 13.89 0.00 35.82 2.29
171 228 6.594788 TTACGTTTGGTATAGAGTTCCAGT 57.405 37.500 0.00 0.00 32.63 4.00
172 229 9.028185 GTTATTACGTTTGGTATAGAGTTCCAG 57.972 37.037 0.00 0.00 32.63 3.86
174 231 7.981225 TGGTTATTACGTTTGGTATAGAGTTCC 59.019 37.037 0.00 0.00 0.00 3.62
192 249 5.552766 AGGTAAGGTTCCCAGTTGGTTATTA 59.447 40.000 0.00 0.00 34.77 0.98
212 269 5.774179 AGAAGTAACCAGGCATAGTAGGTA 58.226 41.667 0.00 0.00 33.15 3.08
226 283 3.496884 TGACGCATGACAAAGAAGTAACC 59.503 43.478 0.00 0.00 0.00 2.85
240 306 4.466567 TGAAAGTTACAGTTGACGCATG 57.533 40.909 0.00 0.00 0.00 4.06
257 323 6.059484 AGAACCGAGGAAGTAACATTTGAAA 58.941 36.000 0.00 0.00 0.00 2.69
258 324 5.617252 AGAACCGAGGAAGTAACATTTGAA 58.383 37.500 0.00 0.00 0.00 2.69
266 332 7.447594 ACAGAAAATAAGAACCGAGGAAGTAA 58.552 34.615 0.00 0.00 0.00 2.24
267 333 7.001099 ACAGAAAATAAGAACCGAGGAAGTA 57.999 36.000 0.00 0.00 0.00 2.24
268 334 5.866207 ACAGAAAATAAGAACCGAGGAAGT 58.134 37.500 0.00 0.00 0.00 3.01
269 335 6.803154 AACAGAAAATAAGAACCGAGGAAG 57.197 37.500 0.00 0.00 0.00 3.46
579 685 3.590720 TCGTGCATATGAAAAGCATCG 57.409 42.857 6.97 4.16 40.78 3.84
580 686 4.661125 TGTTCGTGCATATGAAAAGCATC 58.339 39.130 6.97 0.00 40.78 3.91
584 690 7.538334 TCAAAAGATGTTCGTGCATATGAAAAG 59.462 33.333 6.97 0.00 33.82 2.27
587 693 6.149308 ACTCAAAAGATGTTCGTGCATATGAA 59.851 34.615 6.97 0.00 0.00 2.57
592 698 3.189287 GGACTCAAAAGATGTTCGTGCAT 59.811 43.478 0.00 0.00 0.00 3.96
594 700 2.411547 CGGACTCAAAAGATGTTCGTGC 60.412 50.000 0.00 0.00 0.00 5.34
604 710 1.068474 ATCGTTCGCGGACTCAAAAG 58.932 50.000 16.95 0.00 41.70 2.27
611 717 0.513820 TTGGAAAATCGTTCGCGGAC 59.486 50.000 7.71 7.71 41.70 4.79
612 718 1.227639 TTTGGAAAATCGTTCGCGGA 58.772 45.000 6.13 0.00 41.70 5.54
613 719 2.173964 GATTTGGAAAATCGTTCGCGG 58.826 47.619 6.13 0.00 41.70 6.46
615 721 2.173964 CGGATTTGGAAAATCGTTCGC 58.826 47.619 6.63 0.00 0.00 4.70
616 722 3.160545 CACGGATTTGGAAAATCGTTCG 58.839 45.455 6.63 7.23 31.65 3.95
655 838 7.770201 TGAATTGAGACAAATCACAAACTTGA 58.230 30.769 0.00 0.00 38.65 3.02
656 839 7.990541 TGAATTGAGACAAATCACAAACTTG 57.009 32.000 0.00 0.00 38.65 3.16
700 883 9.458374 AAGTTCACGAGTTTTAATACATTTTGG 57.542 29.630 0.00 0.00 0.00 3.28
715 898 6.238022 CGACCTTTCTTAAAAAGTTCACGAGT 60.238 38.462 0.00 0.00 0.00 4.18
719 902 6.856426 CCATCGACCTTTCTTAAAAAGTTCAC 59.144 38.462 0.00 0.00 0.00 3.18
795 4003 1.745864 TCGCTCGGGTGAGAGACTC 60.746 63.158 0.00 0.00 44.70 3.36
804 4012 4.779966 TCGCTCTCTCGCTCGGGT 62.780 66.667 0.00 0.00 0.00 5.28
805 4013 3.947841 CTCGCTCTCTCGCTCGGG 61.948 72.222 0.00 0.00 0.00 5.14
808 4016 1.934463 CTCTCTCGCTCTCTCGCTC 59.066 63.158 0.00 0.00 0.00 5.03
809 4017 2.180204 GCTCTCTCGCTCTCTCGCT 61.180 63.158 0.00 0.00 0.00 4.93
810 4018 2.327940 GCTCTCTCGCTCTCTCGC 59.672 66.667 0.00 0.00 0.00 5.03
811 4019 0.872451 TACGCTCTCTCGCTCTCTCG 60.872 60.000 0.00 0.00 0.00 4.04
812 4020 0.580104 GTACGCTCTCTCGCTCTCTC 59.420 60.000 0.00 0.00 0.00 3.20
813 4021 0.812412 GGTACGCTCTCTCGCTCTCT 60.812 60.000 0.00 0.00 0.00 3.10
814 4022 0.812412 AGGTACGCTCTCTCGCTCTC 60.812 60.000 0.00 0.00 0.00 3.20
817 4025 0.961358 AACAGGTACGCTCTCTCGCT 60.961 55.000 0.00 0.00 0.00 4.93
818 4026 0.731417 TAACAGGTACGCTCTCTCGC 59.269 55.000 0.00 0.00 0.00 5.03
819 4027 2.008329 AGTAACAGGTACGCTCTCTCG 58.992 52.381 0.00 0.00 37.81 4.04
821 4029 2.093106 CCAGTAACAGGTACGCTCTCT 58.907 52.381 0.00 0.00 37.81 3.10
827 4035 1.153706 CGGCCCAGTAACAGGTACG 60.154 63.158 0.00 0.00 37.81 3.67
829 4037 2.662070 GCCGGCCCAGTAACAGGTA 61.662 63.158 18.11 0.00 0.00 3.08
830 4038 4.029809 GCCGGCCCAGTAACAGGT 62.030 66.667 18.11 0.00 0.00 4.00
831 4039 4.796495 GGCCGGCCCAGTAACAGG 62.796 72.222 36.64 0.00 0.00 4.00
845 4053 3.640407 TCAGGTCTGCTGTGGGCC 61.640 66.667 0.00 0.00 40.92 5.80
847 4055 2.047844 CGTCAGGTCTGCTGTGGG 60.048 66.667 0.00 0.00 0.00 4.61
848 4056 2.740055 GCGTCAGGTCTGCTGTGG 60.740 66.667 0.00 0.00 0.00 4.17
851 4059 2.819117 TAAGCGCGTCAGGTCTGCTG 62.819 60.000 8.43 0.00 35.77 4.41
852 4060 2.154798 TTAAGCGCGTCAGGTCTGCT 62.155 55.000 8.43 0.00 37.53 4.24
853 4061 1.289109 TTTAAGCGCGTCAGGTCTGC 61.289 55.000 8.43 0.00 0.00 4.26
855 4063 1.429463 CTTTTAAGCGCGTCAGGTCT 58.571 50.000 8.43 0.00 0.00 3.85
856 4064 0.442699 CCTTTTAAGCGCGTCAGGTC 59.557 55.000 8.43 0.00 0.00 3.85
857 4065 1.574702 GCCTTTTAAGCGCGTCAGGT 61.575 55.000 8.43 0.00 0.00 4.00
858 4066 1.134694 GCCTTTTAAGCGCGTCAGG 59.865 57.895 8.43 5.40 0.00 3.86
859 4067 4.745549 GCCTTTTAAGCGCGTCAG 57.254 55.556 8.43 0.00 0.00 3.51
867 4075 2.162408 CCCTTCTTCAGCGCCTTTTAAG 59.838 50.000 2.29 2.90 0.00 1.85
868 4076 2.159382 CCCTTCTTCAGCGCCTTTTAA 58.841 47.619 2.29 0.00 0.00 1.52
869 4077 1.821216 CCCTTCTTCAGCGCCTTTTA 58.179 50.000 2.29 0.00 0.00 1.52
871 4079 1.973812 GCCCTTCTTCAGCGCCTTT 60.974 57.895 2.29 0.00 0.00 3.11
872 4080 2.360475 GCCCTTCTTCAGCGCCTT 60.360 61.111 2.29 0.00 0.00 4.35
873 4081 3.325753 AGCCCTTCTTCAGCGCCT 61.326 61.111 2.29 0.00 0.00 5.52
874 4082 3.130160 CAGCCCTTCTTCAGCGCC 61.130 66.667 2.29 0.00 0.00 6.53
875 4083 2.359230 ACAGCCCTTCTTCAGCGC 60.359 61.111 0.00 0.00 0.00 5.92
876 4084 2.097038 CGACAGCCCTTCTTCAGCG 61.097 63.158 0.00 0.00 0.00 5.18
878 4086 0.603707 TTGCGACAGCCCTTCTTCAG 60.604 55.000 0.00 0.00 44.33 3.02
879 4087 0.884704 GTTGCGACAGCCCTTCTTCA 60.885 55.000 0.00 0.00 44.33 3.02
881 4089 0.685097 TAGTTGCGACAGCCCTTCTT 59.315 50.000 6.90 0.00 44.33 2.52
882 4090 0.037232 GTAGTTGCGACAGCCCTTCT 60.037 55.000 6.90 0.00 44.33 2.85
887 4095 2.391389 GCCAGTAGTTGCGACAGCC 61.391 63.158 6.90 0.00 44.33 4.85
892 4100 1.302192 GTTGGGCCAGTAGTTGCGA 60.302 57.895 6.23 0.00 0.00 5.10
893 4101 1.302511 AGTTGGGCCAGTAGTTGCG 60.303 57.895 6.23 0.00 0.00 4.85
895 4103 0.250901 AGCAGTTGGGCCAGTAGTTG 60.251 55.000 6.23 3.46 0.00 3.16
896 4104 0.478507 AAGCAGTTGGGCCAGTAGTT 59.521 50.000 6.23 0.00 0.00 2.24
899 4107 1.378762 GGAAGCAGTTGGGCCAGTA 59.621 57.895 6.23 0.00 0.00 2.74
905 4113 4.659172 TGCGGGGAAGCAGTTGGG 62.659 66.667 0.00 0.00 42.92 4.12
912 4120 0.665298 GAATGAAGATGCGGGGAAGC 59.335 55.000 0.00 0.00 37.71 3.86
915 4123 0.464373 GCTGAATGAAGATGCGGGGA 60.464 55.000 0.00 0.00 0.00 4.81
917 4125 1.450531 GGGCTGAATGAAGATGCGGG 61.451 60.000 0.00 0.00 0.00 6.13
918 4126 1.779025 CGGGCTGAATGAAGATGCGG 61.779 60.000 0.00 0.00 0.00 5.69
920 4128 0.659957 GACGGGCTGAATGAAGATGC 59.340 55.000 0.00 0.00 0.00 3.91
922 4130 1.139853 GAGGACGGGCTGAATGAAGAT 59.860 52.381 0.00 0.00 0.00 2.40
923 4131 0.537188 GAGGACGGGCTGAATGAAGA 59.463 55.000 0.00 0.00 0.00 2.87
925 4133 0.909610 AGGAGGACGGGCTGAATGAA 60.910 55.000 0.00 0.00 0.00 2.57
926 4134 1.306141 AGGAGGACGGGCTGAATGA 60.306 57.895 0.00 0.00 0.00 2.57
928 4136 2.066999 GGAGGAGGACGGGCTGAAT 61.067 63.158 0.00 0.00 0.00 2.57
930 4138 3.965026 CTGGAGGAGGACGGGCTGA 62.965 68.421 0.00 0.00 0.00 4.26
931 4139 3.465403 CTGGAGGAGGACGGGCTG 61.465 72.222 0.00 0.00 0.00 4.85
935 4143 2.765807 ATGGCTGGAGGAGGACGG 60.766 66.667 0.00 0.00 0.00 4.79
936 4144 2.801631 GGATGGCTGGAGGAGGACG 61.802 68.421 0.00 0.00 0.00 4.79
937 4145 1.059006 ATGGATGGCTGGAGGAGGAC 61.059 60.000 0.00 0.00 0.00 3.85
938 4146 0.765903 GATGGATGGCTGGAGGAGGA 60.766 60.000 0.00 0.00 0.00 3.71
947 4155 1.723128 GGGATGGTGGATGGATGGCT 61.723 60.000 0.00 0.00 0.00 4.75
948 4156 1.228675 GGGATGGTGGATGGATGGC 60.229 63.158 0.00 0.00 0.00 4.40
950 4158 1.601759 GCGGGATGGTGGATGGATG 60.602 63.158 0.00 0.00 0.00 3.51
951 4159 2.833913 GGCGGGATGGTGGATGGAT 61.834 63.158 0.00 0.00 0.00 3.41
954 4162 4.935495 CCGGCGGGATGGTGGATG 62.935 72.222 20.56 0.00 34.06 3.51
1202 4472 5.220228 CGTCTACAAAGTGCTAGGAAAATCG 60.220 44.000 0.00 0.00 0.00 3.34
1226 4503 2.633488 GAGGCCACATCCTAGAACAAC 58.367 52.381 5.01 0.00 36.38 3.32
1294 4571 1.541233 CCGATTCTATCCCACCACTGC 60.541 57.143 0.00 0.00 0.00 4.40
1341 4618 3.085533 GCTAGTGAGTCCTGAGAGAACA 58.914 50.000 0.00 0.00 0.00 3.18
1377 4655 8.211629 GGAGATATACATGGTATTTATCCACCC 58.788 40.741 12.54 3.32 37.81 4.61
1396 4674 8.192774 CGAGAAGATCGTAGTAGTAGGAGATAT 58.807 40.741 6.19 0.00 46.62 1.63
1441 4719 4.024893 CGGTGCTCATAGAAACGCAAATAT 60.025 41.667 0.00 0.00 33.74 1.28
1459 4743 5.041951 TCATCAAAATACAAGAACGGTGC 57.958 39.130 0.00 0.00 0.00 5.01
1476 4760 1.281867 AGCCGTTTCCCAAGATCATCA 59.718 47.619 0.00 0.00 0.00 3.07
1477 4761 2.044123 AGCCGTTTCCCAAGATCATC 57.956 50.000 0.00 0.00 0.00 2.92
1492 4776 1.016130 CAGTGCACCAGAACTAGCCG 61.016 60.000 14.63 0.00 29.34 5.52
1582 4874 0.346932 AGGAAGGCCCCTCCTCAATA 59.653 55.000 16.78 0.00 46.94 1.90
1588 4880 2.610859 TCACAGGAAGGCCCCTCC 60.611 66.667 12.78 12.78 33.38 4.30
1595 4887 2.372264 CATTCCCATGTCACAGGAAGG 58.628 52.381 4.90 0.96 42.71 3.46
1667 4961 8.141298 TCAGTATCAGGTAACATGGTAGAAAA 57.859 34.615 0.00 0.00 41.41 2.29
1670 4964 7.914427 AATCAGTATCAGGTAACATGGTAGA 57.086 36.000 0.00 0.00 41.41 2.59
1719 5027 6.100134 AGGGATTAAAAGCATGGCATTTACAT 59.900 34.615 0.00 0.00 32.71 2.29
1743 5051 5.272402 AGGGGAAGGGACATTTTATTTGAG 58.728 41.667 0.00 0.00 0.00 3.02
1790 5100 4.713553 TGTTTGTATGAGTGTGTGTCCAT 58.286 39.130 0.00 0.00 0.00 3.41
1800 5110 3.754965 ACATGTGCCTGTTTGTATGAGT 58.245 40.909 0.00 0.00 0.00 3.41
1876 5190 9.700831 AGTGCATACATATCTACATATCTGGTA 57.299 33.333 0.00 0.00 0.00 3.25
1888 5202 4.875536 TGCGTGAAAAGTGCATACATATCT 59.124 37.500 0.00 0.00 32.86 1.98
1889 5203 5.006649 TCTGCGTGAAAAGTGCATACATATC 59.993 40.000 0.00 0.00 38.07 1.63
1890 5204 4.875536 TCTGCGTGAAAAGTGCATACATAT 59.124 37.500 0.00 0.00 38.07 1.78
1892 5206 3.073678 TCTGCGTGAAAAGTGCATACAT 58.926 40.909 0.00 0.00 38.07 2.29
1893 5207 2.488952 TCTGCGTGAAAAGTGCATACA 58.511 42.857 0.00 0.00 38.07 2.29
1894 5208 3.536158 TTCTGCGTGAAAAGTGCATAC 57.464 42.857 0.00 0.00 38.07 2.39
1895 5209 4.560136 TTTTCTGCGTGAAAAGTGCATA 57.440 36.364 11.70 0.00 46.20 3.14
1897 5211 2.929531 TTTTCTGCGTGAAAAGTGCA 57.070 40.000 11.70 0.00 46.20 4.57
1904 5218 2.612212 GGTTCTCTGTTTTCTGCGTGAA 59.388 45.455 0.00 0.00 0.00 3.18
1907 5221 1.594331 GGGTTCTCTGTTTTCTGCGT 58.406 50.000 0.00 0.00 0.00 5.24
1908 5222 0.512952 CGGGTTCTCTGTTTTCTGCG 59.487 55.000 0.00 0.00 0.00 5.18
1909 5223 1.594331 ACGGGTTCTCTGTTTTCTGC 58.406 50.000 0.00 0.00 0.00 4.26
1910 5224 3.741344 CACTACGGGTTCTCTGTTTTCTG 59.259 47.826 0.00 0.00 36.22 3.02
1911 5225 3.387050 ACACTACGGGTTCTCTGTTTTCT 59.613 43.478 0.00 0.00 36.22 2.52
1912 5226 3.725490 ACACTACGGGTTCTCTGTTTTC 58.275 45.455 0.00 0.00 36.22 2.29
1913 5227 3.493873 GGACACTACGGGTTCTCTGTTTT 60.494 47.826 0.00 0.00 36.22 2.43
1914 5228 2.036862 GGACACTACGGGTTCTCTGTTT 59.963 50.000 0.00 0.00 36.22 2.83
1915 5229 1.617357 GGACACTACGGGTTCTCTGTT 59.383 52.381 0.00 0.00 36.22 3.16
1917 5231 1.473278 GAGGACACTACGGGTTCTCTG 59.527 57.143 0.00 0.00 0.00 3.35
1918 5232 1.075050 TGAGGACACTACGGGTTCTCT 59.925 52.381 6.15 0.00 0.00 3.10
1919 5233 1.473278 CTGAGGACACTACGGGTTCTC 59.527 57.143 0.00 0.00 0.00 2.87
1920 5234 1.546961 CTGAGGACACTACGGGTTCT 58.453 55.000 0.00 0.00 0.00 3.01
1921 5235 0.108756 GCTGAGGACACTACGGGTTC 60.109 60.000 0.00 0.00 0.00 3.62
1922 5236 0.542232 AGCTGAGGACACTACGGGTT 60.542 55.000 0.00 0.00 0.00 4.11
1927 5495 3.257393 CACAATCAGCTGAGGACACTAC 58.743 50.000 22.96 0.00 0.00 2.73
1944 5512 7.820386 TCTTATTATAACACGAAAGAGGCACAA 59.180 33.333 0.00 0.00 0.00 3.33
1945 5513 7.324935 TCTTATTATAACACGAAAGAGGCACA 58.675 34.615 0.00 0.00 0.00 4.57
1946 5514 7.766219 TCTTATTATAACACGAAAGAGGCAC 57.234 36.000 0.00 0.00 0.00 5.01
1982 5601 2.294233 AGTTACCAGCATGCAACTGTTG 59.706 45.455 21.98 15.98 38.09 3.33
1983 5602 2.586425 AGTTACCAGCATGCAACTGTT 58.414 42.857 21.98 0.00 38.09 3.16
1984 5603 2.276732 AGTTACCAGCATGCAACTGT 57.723 45.000 21.98 12.97 38.09 3.55
1985 5604 4.764679 TTAAGTTACCAGCATGCAACTG 57.235 40.909 21.98 9.58 39.03 3.16
2159 5782 3.623906 TTGAGCTCTGAAAGGATCTGG 57.376 47.619 16.19 0.00 0.00 3.86
2240 5863 6.085573 TGTTTCAATCATGTACTTTGCGATG 58.914 36.000 0.00 0.00 0.00 3.84
2293 5917 1.945394 CGGGAGAAATCAGATTGGCAG 59.055 52.381 0.00 0.00 0.00 4.85
2465 6089 6.228258 TCTTAAACCGTCTCTGTAAAGCATT 58.772 36.000 0.00 0.00 0.00 3.56
2491 6115 4.554363 AATCTCTCGACCGCCGCG 62.554 66.667 5.59 5.59 38.37 6.46
2533 6161 3.643978 GCATCTGCGTGCCGGATC 61.644 66.667 5.05 0.00 37.45 3.36
2545 6173 2.117156 ACGTACCGGTAGCGCATCT 61.117 57.895 26.05 11.74 0.00 2.90
2554 6182 3.379445 CTCTGGCCACGTACCGGT 61.379 66.667 13.98 13.98 34.93 5.28
2615 6243 3.907927 CGAACGACTTGTTGGCAAA 57.092 47.368 0.00 0.00 42.09 3.68
2680 6337 7.440523 AATGCAGTACAAACAAAACCAAAAA 57.559 28.000 0.00 0.00 0.00 1.94
2681 6338 7.064728 GGTAATGCAGTACAAACAAAACCAAAA 59.935 33.333 24.19 0.00 0.00 2.44
2682 6339 6.535508 GGTAATGCAGTACAAACAAAACCAAA 59.464 34.615 24.19 0.00 0.00 3.28
2683 6340 6.043411 GGTAATGCAGTACAAACAAAACCAA 58.957 36.000 24.19 0.00 0.00 3.67
2684 6341 5.593010 GGTAATGCAGTACAAACAAAACCA 58.407 37.500 24.19 0.00 0.00 3.67
2685 6342 4.677832 CGGTAATGCAGTACAAACAAAACC 59.322 41.667 24.19 6.75 0.00 3.27
2686 6343 4.147479 GCGGTAATGCAGTACAAACAAAAC 59.853 41.667 24.19 4.97 34.15 2.43
2687 6344 4.202020 TGCGGTAATGCAGTACAAACAAAA 60.202 37.500 24.19 1.55 40.62 2.44
2688 6345 3.315470 TGCGGTAATGCAGTACAAACAAA 59.685 39.130 24.19 2.53 40.62 2.83
2689 6346 2.879026 TGCGGTAATGCAGTACAAACAA 59.121 40.909 24.19 3.86 40.62 2.83
2690 6347 2.495084 TGCGGTAATGCAGTACAAACA 58.505 42.857 24.19 15.78 40.62 2.83
2691 6348 2.482721 AGTGCGGTAATGCAGTACAAAC 59.517 45.455 24.19 17.68 46.33 2.93
2692 6349 2.773487 AGTGCGGTAATGCAGTACAAA 58.227 42.857 24.19 7.57 46.33 2.83
2693 6350 2.465860 AGTGCGGTAATGCAGTACAA 57.534 45.000 24.19 7.91 46.33 2.41
2710 6367 6.971184 CGGATTAACAGTCGATTAACAGTAGT 59.029 38.462 0.00 0.00 0.00 2.73
2726 6383 7.011950 CACCTAGCATTTATTGTCGGATTAACA 59.988 37.037 0.00 0.00 0.00 2.41
2737 6394 4.780815 TGGGAGACACCTAGCATTTATTG 58.219 43.478 0.00 0.00 38.98 1.90
2774 6431 7.936584 AGTTGAATTTGAACATTCGGAAAGTA 58.063 30.769 0.00 0.00 36.13 2.24
2785 6443 7.547370 CCAAACCAAACTAGTTGAATTTGAACA 59.453 33.333 25.58 0.00 41.24 3.18
2786 6444 7.547722 ACCAAACCAAACTAGTTGAATTTGAAC 59.452 33.333 25.58 0.00 41.24 3.18
2902 6585 8.242053 GCACTAAAAAGAGCATGCATCATATAT 58.758 33.333 21.98 0.00 33.27 0.86
2916 6601 8.687824 TTTTCACTTTTCAGCACTAAAAAGAG 57.312 30.769 12.04 5.33 42.44 2.85
2996 6683 2.067365 AGGAACCAAAGGGAACACAC 57.933 50.000 0.00 0.00 38.05 3.82
2998 6685 6.510879 CTTATAAGGAACCAAAGGGAACAC 57.489 41.667 4.42 0.00 38.05 3.32
3016 6703 4.223477 ACACTAAGTTGAACCGCCCTTATA 59.777 41.667 0.00 0.00 0.00 0.98
3017 6704 3.008704 ACACTAAGTTGAACCGCCCTTAT 59.991 43.478 0.00 0.00 0.00 1.73
3023 6713 3.685836 ACAAACACTAAGTTGAACCGC 57.314 42.857 0.00 0.00 41.19 5.68
3099 6790 9.859152 CAGAGGGAGTATATCATATCATACAGA 57.141 37.037 0.00 0.00 31.33 3.41
3100 6791 9.639563 ACAGAGGGAGTATATCATATCATACAG 57.360 37.037 0.00 0.00 31.33 2.74
3101 6792 9.634021 GACAGAGGGAGTATATCATATCATACA 57.366 37.037 0.00 0.00 31.33 2.29
3115 6806 4.175962 AGAATTTTGGGACAGAGGGAGTA 58.824 43.478 0.00 0.00 42.39 2.59
3116 6807 2.989571 AGAATTTTGGGACAGAGGGAGT 59.010 45.455 0.00 0.00 42.39 3.85
3117 6808 3.728385 AGAATTTTGGGACAGAGGGAG 57.272 47.619 0.00 0.00 42.39 4.30
3118 6809 3.140144 ACAAGAATTTTGGGACAGAGGGA 59.860 43.478 5.68 0.00 42.39 4.20
3119 6810 3.500343 ACAAGAATTTTGGGACAGAGGG 58.500 45.455 5.68 0.00 42.39 4.30
3120 6811 4.401925 AGACAAGAATTTTGGGACAGAGG 58.598 43.478 5.68 0.00 42.39 3.69
3121 6812 6.936900 TCTAAGACAAGAATTTTGGGACAGAG 59.063 38.462 5.68 0.00 42.39 3.35
3122 6813 6.837312 TCTAAGACAAGAATTTTGGGACAGA 58.163 36.000 5.68 0.00 42.39 3.41
3123 6814 7.693969 ATCTAAGACAAGAATTTTGGGACAG 57.306 36.000 5.68 0.00 42.39 3.51
3124 6815 7.094805 CGAATCTAAGACAAGAATTTTGGGACA 60.095 37.037 5.68 0.00 0.00 4.02
3125 6816 7.244192 CGAATCTAAGACAAGAATTTTGGGAC 58.756 38.462 5.68 0.00 0.00 4.46
3126 6817 6.128007 GCGAATCTAAGACAAGAATTTTGGGA 60.128 38.462 0.00 0.00 0.00 4.37
3127 6818 6.030228 GCGAATCTAAGACAAGAATTTTGGG 58.970 40.000 0.00 0.00 0.00 4.12
3128 6819 6.030228 GGCGAATCTAAGACAAGAATTTTGG 58.970 40.000 0.00 0.00 0.00 3.28
3129 6820 6.846350 AGGCGAATCTAAGACAAGAATTTTG 58.154 36.000 0.00 0.00 0.00 2.44
3130 6821 8.041323 TCTAGGCGAATCTAAGACAAGAATTTT 58.959 33.333 0.00 0.00 0.00 1.82
3131 6822 7.556844 TCTAGGCGAATCTAAGACAAGAATTT 58.443 34.615 0.00 0.00 0.00 1.82
3132 6823 7.113658 TCTAGGCGAATCTAAGACAAGAATT 57.886 36.000 0.00 0.00 0.00 2.17
3133 6824 6.716934 TCTAGGCGAATCTAAGACAAGAAT 57.283 37.500 0.00 0.00 0.00 2.40
3134 6825 6.716934 ATCTAGGCGAATCTAAGACAAGAA 57.283 37.500 0.00 0.00 0.00 2.52
3135 6826 6.073167 CGTATCTAGGCGAATCTAAGACAAGA 60.073 42.308 0.00 0.00 0.00 3.02
3136 6827 6.081049 CGTATCTAGGCGAATCTAAGACAAG 58.919 44.000 0.00 0.00 0.00 3.16
3137 6828 5.048921 CCGTATCTAGGCGAATCTAAGACAA 60.049 44.000 0.00 0.00 0.00 3.18
3138 6829 4.454847 CCGTATCTAGGCGAATCTAAGACA 59.545 45.833 0.00 0.00 0.00 3.41
3139 6830 4.694509 TCCGTATCTAGGCGAATCTAAGAC 59.305 45.833 0.00 0.00 0.00 3.01
3140 6831 4.903054 TCCGTATCTAGGCGAATCTAAGA 58.097 43.478 0.00 0.00 0.00 2.10
3141 6832 5.124138 ACATCCGTATCTAGGCGAATCTAAG 59.876 44.000 0.00 0.00 0.00 2.18
3142 6833 5.008331 ACATCCGTATCTAGGCGAATCTAA 58.992 41.667 0.00 0.00 0.00 2.10
3143 6834 4.586884 ACATCCGTATCTAGGCGAATCTA 58.413 43.478 0.00 0.00 0.00 1.98
3144 6835 3.422796 ACATCCGTATCTAGGCGAATCT 58.577 45.455 0.00 0.00 0.00 2.40
3145 6836 3.851976 ACATCCGTATCTAGGCGAATC 57.148 47.619 0.00 0.00 0.00 2.52
3170 6861 9.449719 CTCCTACCAAAGTCACATTTTAGTATT 57.550 33.333 0.00 0.00 0.00 1.89
3171 6862 7.553044 GCTCCTACCAAAGTCACATTTTAGTAT 59.447 37.037 0.00 0.00 0.00 2.12
3172 6863 6.877322 GCTCCTACCAAAGTCACATTTTAGTA 59.123 38.462 0.00 0.00 0.00 1.82
3173 6864 5.705905 GCTCCTACCAAAGTCACATTTTAGT 59.294 40.000 0.00 0.00 0.00 2.24
3174 6865 5.940470 AGCTCCTACCAAAGTCACATTTTAG 59.060 40.000 0.00 0.00 0.00 1.85
3175 6866 5.705441 CAGCTCCTACCAAAGTCACATTTTA 59.295 40.000 0.00 0.00 0.00 1.52
3176 6867 4.520492 CAGCTCCTACCAAAGTCACATTTT 59.480 41.667 0.00 0.00 0.00 1.82
3177 6868 4.074970 CAGCTCCTACCAAAGTCACATTT 58.925 43.478 0.00 0.00 0.00 2.32
3178 6869 3.560025 CCAGCTCCTACCAAAGTCACATT 60.560 47.826 0.00 0.00 0.00 2.71
3179 6870 2.026822 CCAGCTCCTACCAAAGTCACAT 60.027 50.000 0.00 0.00 0.00 3.21
3180 6871 1.347707 CCAGCTCCTACCAAAGTCACA 59.652 52.381 0.00 0.00 0.00 3.58
3181 6872 1.339151 CCCAGCTCCTACCAAAGTCAC 60.339 57.143 0.00 0.00 0.00 3.67
3182 6873 0.984230 CCCAGCTCCTACCAAAGTCA 59.016 55.000 0.00 0.00 0.00 3.41
3183 6874 1.066071 GTCCCAGCTCCTACCAAAGTC 60.066 57.143 0.00 0.00 0.00 3.01
3184 6875 0.984995 GTCCCAGCTCCTACCAAAGT 59.015 55.000 0.00 0.00 0.00 2.66
3185 6876 0.253327 GGTCCCAGCTCCTACCAAAG 59.747 60.000 3.53 0.00 32.04 2.77
3186 6877 1.205460 GGGTCCCAGCTCCTACCAAA 61.205 60.000 1.78 0.00 33.46 3.28
3187 6878 1.615424 GGGTCCCAGCTCCTACCAA 60.615 63.158 1.78 0.00 33.46 3.67
3188 6879 1.226104 TAGGGTCCCAGCTCCTACCA 61.226 60.000 11.55 0.00 33.46 3.25
3189 6880 0.759812 GTAGGGTCCCAGCTCCTACC 60.760 65.000 11.55 8.02 44.29 3.18
3190 6881 2.823587 GTAGGGTCCCAGCTCCTAC 58.176 63.158 11.55 11.60 43.95 3.18
3191 6882 0.261991 CAGTAGGGTCCCAGCTCCTA 59.738 60.000 11.55 0.00 32.46 2.94
3192 6883 1.002274 CAGTAGGGTCCCAGCTCCT 59.998 63.158 11.55 0.00 34.85 3.69
3193 6884 2.066999 CCAGTAGGGTCCCAGCTCC 61.067 68.421 11.55 0.00 0.00 4.70
3194 6885 3.635510 CCAGTAGGGTCCCAGCTC 58.364 66.667 11.55 0.00 0.00 4.09
3204 6895 1.887198 CTACGCCATAGACCCAGTAGG 59.113 57.143 0.00 0.00 43.78 3.18
3205 6896 1.887198 CCTACGCCATAGACCCAGTAG 59.113 57.143 0.00 0.00 31.83 2.57
3206 6897 1.216175 ACCTACGCCATAGACCCAGTA 59.784 52.381 0.00 0.00 31.83 2.74
3207 6898 0.032416 ACCTACGCCATAGACCCAGT 60.032 55.000 0.00 0.00 31.83 4.00
3208 6899 1.120530 AACCTACGCCATAGACCCAG 58.879 55.000 0.00 0.00 31.83 4.45
3209 6900 0.828022 CAACCTACGCCATAGACCCA 59.172 55.000 0.00 0.00 31.83 4.51
3210 6901 0.828677 ACAACCTACGCCATAGACCC 59.171 55.000 0.00 0.00 31.83 4.46
3211 6902 2.035576 CCTACAACCTACGCCATAGACC 59.964 54.545 0.00 0.00 31.83 3.85
3212 6903 2.035576 CCCTACAACCTACGCCATAGAC 59.964 54.545 0.00 0.00 31.83 2.59
3213 6904 2.313317 CCCTACAACCTACGCCATAGA 58.687 52.381 0.00 0.00 31.83 1.98
3214 6905 1.343465 CCCCTACAACCTACGCCATAG 59.657 57.143 0.00 0.00 0.00 2.23
3215 6906 1.063038 TCCCCTACAACCTACGCCATA 60.063 52.381 0.00 0.00 0.00 2.74
3216 6907 0.325860 TCCCCTACAACCTACGCCAT 60.326 55.000 0.00 0.00 0.00 4.40
3217 6908 0.544833 TTCCCCTACAACCTACGCCA 60.545 55.000 0.00 0.00 0.00 5.69
3218 6909 0.177373 CTTCCCCTACAACCTACGCC 59.823 60.000 0.00 0.00 0.00 5.68
3219 6910 0.177373 CCTTCCCCTACAACCTACGC 59.823 60.000 0.00 0.00 0.00 4.42
3220 6911 1.755380 CTCCTTCCCCTACAACCTACG 59.245 57.143 0.00 0.00 0.00 3.51
3221 6912 2.117051 CCTCCTTCCCCTACAACCTAC 58.883 57.143 0.00 0.00 0.00 3.18
3222 6913 1.009183 CCCTCCTTCCCCTACAACCTA 59.991 57.143 0.00 0.00 0.00 3.08
3223 6914 0.253207 CCCTCCTTCCCCTACAACCT 60.253 60.000 0.00 0.00 0.00 3.50
3224 6915 1.279749 CCCCTCCTTCCCCTACAACC 61.280 65.000 0.00 0.00 0.00 3.77
3225 6916 1.279749 CCCCCTCCTTCCCCTACAAC 61.280 65.000 0.00 0.00 0.00 3.32
3226 6917 1.084084 CCCCCTCCTTCCCCTACAA 59.916 63.158 0.00 0.00 0.00 2.41
3227 6918 2.792222 CCCCCTCCTTCCCCTACA 59.208 66.667 0.00 0.00 0.00 2.74
3228 6919 2.773053 GCCCCCTCCTTCCCCTAC 60.773 72.222 0.00 0.00 0.00 3.18
3229 6920 2.964632 AGCCCCCTCCTTCCCCTA 60.965 66.667 0.00 0.00 0.00 3.53
3230 6921 4.767892 CAGCCCCCTCCTTCCCCT 62.768 72.222 0.00 0.00 0.00 4.79
3232 6923 4.760220 TCCAGCCCCCTCCTTCCC 62.760 72.222 0.00 0.00 0.00 3.97
3233 6924 3.412408 GTCCAGCCCCCTCCTTCC 61.412 72.222 0.00 0.00 0.00 3.46
3234 6925 3.787001 CGTCCAGCCCCCTCCTTC 61.787 72.222 0.00 0.00 0.00 3.46
3235 6926 4.658786 ACGTCCAGCCCCCTCCTT 62.659 66.667 0.00 0.00 0.00 3.36
3245 6936 2.811317 GAGCTTCGCCACGTCCAG 60.811 66.667 0.00 0.00 0.00 3.86
3246 6937 4.717629 CGAGCTTCGCCACGTCCA 62.718 66.667 0.00 0.00 31.14 4.02
3247 6938 4.719369 ACGAGCTTCGCCACGTCC 62.719 66.667 5.63 0.00 45.12 4.79
3248 6939 3.470567 CACGAGCTTCGCCACGTC 61.471 66.667 5.63 0.00 45.12 4.34
3251 6942 3.112709 GACCACGAGCTTCGCCAC 61.113 66.667 5.63 0.00 45.12 5.01
3252 6943 4.717629 CGACCACGAGCTTCGCCA 62.718 66.667 5.63 0.00 45.12 5.69
3276 6967 4.423231 GGCATATTAGGGCCCTGC 57.577 61.111 35.81 28.09 44.53 4.85
3280 6971 0.328258 ATGACCGGCATATTAGGGCC 59.672 55.000 0.00 0.00 46.80 5.80
3281 6972 3.007635 GTTATGACCGGCATATTAGGGC 58.992 50.000 16.09 0.00 39.15 5.19
3282 6973 4.020573 TCTGTTATGACCGGCATATTAGGG 60.021 45.833 16.09 8.10 39.15 3.53
3283 6974 4.929808 GTCTGTTATGACCGGCATATTAGG 59.070 45.833 16.09 9.32 39.15 2.69
3284 6975 5.784177 AGTCTGTTATGACCGGCATATTAG 58.216 41.667 16.09 15.83 39.15 1.73
3285 6976 5.801531 AGTCTGTTATGACCGGCATATTA 57.198 39.130 16.09 9.48 39.15 0.98
3286 6977 4.689612 AGTCTGTTATGACCGGCATATT 57.310 40.909 16.09 0.00 39.15 1.28
3287 6978 4.100963 TCAAGTCTGTTATGACCGGCATAT 59.899 41.667 16.09 5.40 39.15 1.78
3288 6979 3.449377 TCAAGTCTGTTATGACCGGCATA 59.551 43.478 0.00 7.99 38.44 3.14
3289 6980 2.236146 TCAAGTCTGTTATGACCGGCAT 59.764 45.455 14.43 14.43 41.08 4.40
3290 6981 1.621317 TCAAGTCTGTTATGACCGGCA 59.379 47.619 0.00 0.00 37.66 5.69
3291 6982 2.380084 TCAAGTCTGTTATGACCGGC 57.620 50.000 0.00 0.00 37.66 6.13
3292 6983 5.006153 TGTATCAAGTCTGTTATGACCGG 57.994 43.478 0.00 0.00 37.66 5.28
3293 6984 5.291128 GGTTGTATCAAGTCTGTTATGACCG 59.709 44.000 0.00 0.00 37.66 4.79
3294 6985 5.291128 CGGTTGTATCAAGTCTGTTATGACC 59.709 44.000 0.00 0.00 37.66 4.02
3295 6986 5.867716 ACGGTTGTATCAAGTCTGTTATGAC 59.132 40.000 0.00 0.00 37.23 3.06
3296 6987 6.032956 ACGGTTGTATCAAGTCTGTTATGA 57.967 37.500 0.00 0.00 0.00 2.15
3297 6988 8.420374 AATACGGTTGTATCAAGTCTGTTATG 57.580 34.615 0.00 0.00 40.42 1.90
3299 6990 9.577110 CTAAATACGGTTGTATCAAGTCTGTTA 57.423 33.333 0.00 0.00 40.42 2.41
3300 6991 8.308931 TCTAAATACGGTTGTATCAAGTCTGTT 58.691 33.333 0.00 0.00 40.42 3.16
3301 6992 7.758528 GTCTAAATACGGTTGTATCAAGTCTGT 59.241 37.037 0.00 0.00 40.42 3.41
3302 6993 7.758076 TGTCTAAATACGGTTGTATCAAGTCTG 59.242 37.037 0.00 0.00 40.42 3.51
3303 6994 7.833786 TGTCTAAATACGGTTGTATCAAGTCT 58.166 34.615 0.00 0.00 40.42 3.24
3304 6995 8.470040 TTGTCTAAATACGGTTGTATCAAGTC 57.530 34.615 0.00 0.00 40.42 3.01
3305 6996 8.836268 TTTGTCTAAATACGGTTGTATCAAGT 57.164 30.769 0.00 0.00 40.42 3.16
3324 7015 9.546428 CCCAAAATTCTTGTCTTAAATTTGTCT 57.454 29.630 0.00 0.00 33.95 3.41
3325 7016 9.541143 TCCCAAAATTCTTGTCTTAAATTTGTC 57.459 29.630 0.00 0.00 33.95 3.18
3326 7017 9.325198 GTCCCAAAATTCTTGTCTTAAATTTGT 57.675 29.630 0.00 0.00 33.95 2.83
3327 7018 8.487176 CGTCCCAAAATTCTTGTCTTAAATTTG 58.513 33.333 0.00 0.00 33.95 2.32
3328 7019 7.655732 CCGTCCCAAAATTCTTGTCTTAAATTT 59.344 33.333 0.00 0.00 34.86 1.82
3329 7020 7.014808 TCCGTCCCAAAATTCTTGTCTTAAATT 59.985 33.333 0.00 0.00 0.00 1.82
3330 7021 6.492087 TCCGTCCCAAAATTCTTGTCTTAAAT 59.508 34.615 0.00 0.00 0.00 1.40
3331 7022 5.828859 TCCGTCCCAAAATTCTTGTCTTAAA 59.171 36.000 0.00 0.00 0.00 1.52
3332 7023 5.378332 TCCGTCCCAAAATTCTTGTCTTAA 58.622 37.500 0.00 0.00 0.00 1.85
3333 7024 4.975631 TCCGTCCCAAAATTCTTGTCTTA 58.024 39.130 0.00 0.00 0.00 2.10
3334 7025 3.821033 CTCCGTCCCAAAATTCTTGTCTT 59.179 43.478 0.00 0.00 0.00 3.01
3335 7026 3.412386 CTCCGTCCCAAAATTCTTGTCT 58.588 45.455 0.00 0.00 0.00 3.41
3336 7027 2.488153 CCTCCGTCCCAAAATTCTTGTC 59.512 50.000 0.00 0.00 0.00 3.18
3337 7028 2.514803 CCTCCGTCCCAAAATTCTTGT 58.485 47.619 0.00 0.00 0.00 3.16
3338 7029 1.818674 CCCTCCGTCCCAAAATTCTTG 59.181 52.381 0.00 0.00 0.00 3.02
3339 7030 1.708551 TCCCTCCGTCCCAAAATTCTT 59.291 47.619 0.00 0.00 0.00 2.52
3340 7031 1.282157 CTCCCTCCGTCCCAAAATTCT 59.718 52.381 0.00 0.00 0.00 2.40
3341 7032 1.004394 ACTCCCTCCGTCCCAAAATTC 59.996 52.381 0.00 0.00 0.00 2.17
3342 7033 1.073098 ACTCCCTCCGTCCCAAAATT 58.927 50.000 0.00 0.00 0.00 1.82
3343 7034 1.961133 TACTCCCTCCGTCCCAAAAT 58.039 50.000 0.00 0.00 0.00 1.82
3344 7035 1.626825 CTTACTCCCTCCGTCCCAAAA 59.373 52.381 0.00 0.00 0.00 2.44
3345 7036 1.203212 TCTTACTCCCTCCGTCCCAAA 60.203 52.381 0.00 0.00 0.00 3.28
3346 7037 0.410663 TCTTACTCCCTCCGTCCCAA 59.589 55.000 0.00 0.00 0.00 4.12
3347 7038 0.635009 ATCTTACTCCCTCCGTCCCA 59.365 55.000 0.00 0.00 0.00 4.37
3348 7039 1.413077 CAATCTTACTCCCTCCGTCCC 59.587 57.143 0.00 0.00 0.00 4.46
3349 7040 2.108970 ACAATCTTACTCCCTCCGTCC 58.891 52.381 0.00 0.00 0.00 4.79
3350 7041 5.532664 AATACAATCTTACTCCCTCCGTC 57.467 43.478 0.00 0.00 0.00 4.79
3351 7042 5.451520 CGAAATACAATCTTACTCCCTCCGT 60.452 44.000 0.00 0.00 0.00 4.69
3352 7043 4.982916 CGAAATACAATCTTACTCCCTCCG 59.017 45.833 0.00 0.00 0.00 4.63
3353 7044 6.158023 TCGAAATACAATCTTACTCCCTCC 57.842 41.667 0.00 0.00 0.00 4.30
3354 7045 7.039882 TGTTCGAAATACAATCTTACTCCCTC 58.960 38.462 0.00 0.00 0.00 4.30
3355 7046 6.942976 TGTTCGAAATACAATCTTACTCCCT 58.057 36.000 0.00 0.00 0.00 4.20
3356 7047 7.787725 ATGTTCGAAATACAATCTTACTCCC 57.212 36.000 0.00 0.00 0.00 4.30
3360 7051 9.878599 CCCAATATGTTCGAAATACAATCTTAC 57.121 33.333 0.00 0.00 0.00 2.34
3370 7061 6.357367 AGCTAAGACCCAATATGTTCGAAAT 58.643 36.000 0.00 0.00 0.00 2.17
3385 7076 8.443953 AGAATATGATTGTTGAAGCTAAGACC 57.556 34.615 0.00 0.00 0.00 3.85
3391 7082 8.814038 AAGGTAAGAATATGATTGTTGAAGCT 57.186 30.769 0.00 0.00 0.00 3.74
3431 7122 1.075374 ACAAAAGCATAGCTGGGACCA 59.925 47.619 0.00 0.00 39.62 4.02
3437 7128 6.293298 GGTCTGATGATACAAAAGCATAGCTG 60.293 42.308 0.00 0.00 39.62 4.24
3462 7153 5.949735 ACAAACCACAACACTCTTGTTAAG 58.050 37.500 0.00 0.00 44.57 1.85
3463 7154 5.968528 ACAAACCACAACACTCTTGTTAA 57.031 34.783 0.00 0.00 44.57 2.01
3464 7155 5.473846 TCAACAAACCACAACACTCTTGTTA 59.526 36.000 0.00 0.00 44.57 2.41
3466 7157 3.823873 TCAACAAACCACAACACTCTTGT 59.176 39.130 0.00 0.00 37.67 3.16
3490 7196 9.875691 GCATATATGACTTTATCTGACCATACA 57.124 33.333 17.10 0.00 0.00 2.29
3513 7219 0.181114 ATACAGCACACCCGATGCAT 59.819 50.000 0.00 0.00 45.92 3.96
3520 7226 2.749621 CTGAAGGAAATACAGCACACCC 59.250 50.000 0.00 0.00 0.00 4.61
3535 7241 3.049708 TCTGTTGAGATGCACTGAAGG 57.950 47.619 0.00 0.00 0.00 3.46
3536 7242 3.436015 CCTTCTGTTGAGATGCACTGAAG 59.564 47.826 10.53 10.53 35.69 3.02
3537 7243 3.181451 ACCTTCTGTTGAGATGCACTGAA 60.181 43.478 0.00 0.00 0.00 3.02
3538 7244 2.369860 ACCTTCTGTTGAGATGCACTGA 59.630 45.455 0.00 0.00 0.00 3.41
3539 7245 2.483106 CACCTTCTGTTGAGATGCACTG 59.517 50.000 0.00 0.00 0.00 3.66
3540 7246 2.775890 CACCTTCTGTTGAGATGCACT 58.224 47.619 0.00 0.00 0.00 4.40
3541 7247 1.198637 GCACCTTCTGTTGAGATGCAC 59.801 52.381 0.00 0.00 0.00 4.57
3564 7270 5.296151 TGTGATATGATCTTCCCCTTGAC 57.704 43.478 0.00 0.00 0.00 3.18
3566 7272 4.070716 GCTGTGATATGATCTTCCCCTTG 58.929 47.826 0.00 0.00 0.00 3.61


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.