Multiple sequence alignment - TraesCS4A01G455700

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G455700 chr4A 100.000 3149 0 0 1 3149 719051538 719054686 0.000000e+00 5816.0
1 TraesCS4A01G455700 chr4A 88.845 1013 112 1 997 2009 719140751 719141762 0.000000e+00 1243.0
2 TraesCS4A01G455700 chr4A 97.333 375 8 2 1 373 93969423 93969797 1.230000e-178 636.0
3 TraesCS4A01G455700 chr3D 93.282 2188 121 10 792 2964 584931584 584933760 0.000000e+00 3203.0
4 TraesCS4A01G455700 chr3D 82.591 247 30 5 441 679 584930629 584930870 4.120000e-49 206.0
5 TraesCS4A01G455700 chr3D 89.655 87 5 2 3063 3149 584940312 584940394 1.190000e-19 108.0
6 TraesCS4A01G455700 chr7A 91.996 2249 135 15 792 3018 14821642 14819417 0.000000e+00 3114.0
7 TraesCS4A01G455700 chr7A 86.785 961 122 3 1314 2272 14773843 14772886 0.000000e+00 1066.0
8 TraesCS4A01G455700 chr7A 86.490 829 98 7 792 1610 5150885 5151709 0.000000e+00 898.0
9 TraesCS4A01G455700 chr7A 86.547 669 81 8 1608 2272 5153002 5153665 0.000000e+00 728.0
10 TraesCS4A01G455700 chr7A 80.308 909 166 10 1246 2151 91294519 91295417 0.000000e+00 675.0
11 TraesCS4A01G455700 chr7A 85.144 626 88 3 1649 2272 14745624 14746246 1.230000e-178 636.0
12 TraesCS4A01G455700 chr7A 97.312 372 9 1 1 372 505022143 505022513 5.730000e-177 630.0
13 TraesCS4A01G455700 chr7A 81.047 707 125 9 1343 2045 14896197 14895496 3.550000e-154 555.0
14 TraesCS4A01G455700 chr7A 79.664 536 78 15 792 1315 14774599 14774083 1.070000e-94 357.0
15 TraesCS4A01G455700 chr7A 80.449 445 67 12 792 1222 5171262 5171700 3.920000e-84 322.0
16 TraesCS4A01G455700 chr7A 83.708 356 28 15 361 687 14827639 14827285 3.050000e-80 309.0
17 TraesCS4A01G455700 chr7D 91.874 2252 145 13 928 3149 15913366 15911123 0.000000e+00 3110.0
18 TraesCS4A01G455700 chr7D 86.945 1103 126 10 794 1886 15853422 15852328 0.000000e+00 1223.0
19 TraesCS4A01G455700 chr7D 84.518 394 56 3 1881 2272 15840990 15840600 4.930000e-103 385.0
20 TraesCS4A01G455700 chr7B 91.146 1073 74 7 792 1864 711385437 711384386 0.000000e+00 1435.0
21 TraesCS4A01G455700 chr7B 92.133 572 42 2 1856 2424 711364133 711363562 0.000000e+00 804.0
22 TraesCS4A01G455700 chr7B 94.697 264 11 1 2872 3135 711362989 711362729 1.050000e-109 407.0
23 TraesCS4A01G455700 chr7B 88.983 236 20 4 2591 2825 711363234 711363004 1.430000e-73 287.0
24 TraesCS4A01G455700 chr7B 91.935 186 14 1 2423 2608 711363458 711363274 3.120000e-65 259.0
25 TraesCS4A01G455700 chr3A 99.169 361 3 0 1 361 660902076 660901716 0.000000e+00 651.0
26 TraesCS4A01G455700 chr3A 93.617 47 2 1 718 764 581554302 581554257 5.640000e-08 69.4
27 TraesCS4A01G455700 chr3A 95.349 43 2 0 722 764 713767664 713767706 5.640000e-08 69.4
28 TraesCS4A01G455700 chr1B 98.343 362 6 0 1 362 394860601 394860962 1.230000e-178 636.0
29 TraesCS4A01G455700 chr1B 97.790 362 8 0 1 362 518268233 518268594 2.670000e-175 625.0
30 TraesCS4A01G455700 chr1B 84.286 70 11 0 692 761 362309971 362310040 5.640000e-08 69.4
31 TraesCS4A01G455700 chr4B 98.066 362 7 0 1 362 497110619 497110980 5.730000e-177 630.0
32 TraesCS4A01G455700 chr1A 98.066 362 7 0 1 362 448917620 448917981 5.730000e-177 630.0
33 TraesCS4A01G455700 chr2A 97.051 373 9 2 1 371 105598256 105598628 7.410000e-176 627.0
34 TraesCS4A01G455700 chr2A 98.056 360 7 0 3 362 542558835 542559194 7.410000e-176 627.0
35 TraesCS4A01G455700 chr6A 79.352 247 42 4 1977 2222 571025831 571025593 6.990000e-37 165.0
36 TraesCS4A01G455700 chr1D 94.000 50 3 0 716 765 418761932 418761981 3.370000e-10 76.8
37 TraesCS4A01G455700 chr6D 92.000 50 3 1 718 767 58466903 58466855 5.640000e-08 69.4
38 TraesCS4A01G455700 chr2B 93.333 45 3 0 722 766 777832394 777832438 2.030000e-07 67.6
39 TraesCS4A01G455700 chrUn 91.667 48 3 1 717 764 277522171 277522125 7.290000e-07 65.8
40 TraesCS4A01G455700 chr5A 80.488 82 16 0 685 766 640394270 640394189 2.620000e-06 63.9
41 TraesCS4A01G455700 chr4D 88.235 51 5 1 717 766 408788659 408788609 3.390000e-05 60.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G455700 chr4A 719051538 719054686 3148 False 5816.00 5816 100.0000 1 3149 1 chr4A.!!$F2 3148
1 TraesCS4A01G455700 chr4A 719140751 719141762 1011 False 1243.00 1243 88.8450 997 2009 1 chr4A.!!$F3 1012
2 TraesCS4A01G455700 chr3D 584930629 584933760 3131 False 1704.50 3203 87.9365 441 2964 2 chr3D.!!$F2 2523
3 TraesCS4A01G455700 chr7A 14819417 14821642 2225 True 3114.00 3114 91.9960 792 3018 1 chr7A.!!$R1 2226
4 TraesCS4A01G455700 chr7A 5150885 5153665 2780 False 813.00 898 86.5185 792 2272 2 chr7A.!!$F5 1480
5 TraesCS4A01G455700 chr7A 14772886 14774599 1713 True 711.50 1066 83.2245 792 2272 2 chr7A.!!$R4 1480
6 TraesCS4A01G455700 chr7A 91294519 91295417 898 False 675.00 675 80.3080 1246 2151 1 chr7A.!!$F3 905
7 TraesCS4A01G455700 chr7A 14745624 14746246 622 False 636.00 636 85.1440 1649 2272 1 chr7A.!!$F2 623
8 TraesCS4A01G455700 chr7A 14895496 14896197 701 True 555.00 555 81.0470 1343 2045 1 chr7A.!!$R3 702
9 TraesCS4A01G455700 chr7D 15911123 15913366 2243 True 3110.00 3110 91.8740 928 3149 1 chr7D.!!$R3 2221
10 TraesCS4A01G455700 chr7D 15852328 15853422 1094 True 1223.00 1223 86.9450 794 1886 1 chr7D.!!$R2 1092
11 TraesCS4A01G455700 chr7B 711384386 711385437 1051 True 1435.00 1435 91.1460 792 1864 1 chr7B.!!$R1 1072
12 TraesCS4A01G455700 chr7B 711362729 711364133 1404 True 439.25 804 91.9370 1856 3135 4 chr7B.!!$R2 1279

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
466 467 0.035439 CCAGGTTTGGGCACGTAGAT 60.035 55.0 0.0 0.0 41.05 1.98 F
696 750 0.179073 ACCGAATCCTCGCCATCTTG 60.179 55.0 0.0 0.0 44.04 3.02 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1532 2419 1.194322 GCCAAAACAAATTGCGCGATT 59.806 42.857 17.36 17.36 0.0 3.34 R
2538 4839 1.213926 AGGCCTGGGATGAATCAAGTC 59.786 52.381 3.11 0.00 0.0 3.01 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 4.890088 AGTTGCCGTGTAGTAAAGAATCA 58.110 39.130 0.00 0.00 0.00 2.57
23 24 4.689345 AGTTGCCGTGTAGTAAAGAATCAC 59.311 41.667 0.00 0.00 0.00 3.06
24 25 4.260139 TGCCGTGTAGTAAAGAATCACA 57.740 40.909 0.00 0.00 0.00 3.58
25 26 4.242475 TGCCGTGTAGTAAAGAATCACAG 58.758 43.478 0.00 0.00 0.00 3.66
26 27 4.243270 GCCGTGTAGTAAAGAATCACAGT 58.757 43.478 0.00 0.00 0.00 3.55
27 28 4.689345 GCCGTGTAGTAAAGAATCACAGTT 59.311 41.667 0.00 0.00 0.00 3.16
28 29 5.389516 GCCGTGTAGTAAAGAATCACAGTTG 60.390 44.000 0.00 0.00 0.00 3.16
29 30 5.389516 CCGTGTAGTAAAGAATCACAGTTGC 60.390 44.000 0.00 0.00 0.00 4.17
30 31 5.389516 CGTGTAGTAAAGAATCACAGTTGCC 60.390 44.000 0.00 0.00 0.00 4.52
31 32 5.468746 GTGTAGTAAAGAATCACAGTTGCCA 59.531 40.000 0.00 0.00 0.00 4.92
32 33 6.149474 GTGTAGTAAAGAATCACAGTTGCCAT 59.851 38.462 0.00 0.00 0.00 4.40
33 34 5.633830 AGTAAAGAATCACAGTTGCCATG 57.366 39.130 0.00 0.00 0.00 3.66
34 35 5.072741 AGTAAAGAATCACAGTTGCCATGT 58.927 37.500 0.00 0.00 0.00 3.21
36 37 2.867624 AGAATCACAGTTGCCATGTGT 58.132 42.857 11.40 0.00 46.49 3.72
37 38 2.555325 AGAATCACAGTTGCCATGTGTG 59.445 45.455 11.40 6.99 46.49 3.82
38 39 1.985473 ATCACAGTTGCCATGTGTGT 58.015 45.000 11.76 0.06 46.49 3.72
39 40 1.023502 TCACAGTTGCCATGTGTGTG 58.976 50.000 11.76 8.05 46.49 3.82
40 41 0.740149 CACAGTTGCCATGTGTGTGT 59.260 50.000 5.46 0.00 42.47 3.72
41 42 1.946081 CACAGTTGCCATGTGTGTGTA 59.054 47.619 5.46 0.00 42.47 2.90
42 43 1.946768 ACAGTTGCCATGTGTGTGTAC 59.053 47.619 0.00 0.00 0.00 2.90
43 44 1.266718 CAGTTGCCATGTGTGTGTACC 59.733 52.381 0.00 0.00 0.00 3.34
44 45 0.237235 GTTGCCATGTGTGTGTACCG 59.763 55.000 0.00 0.00 0.00 4.02
45 46 0.106894 TTGCCATGTGTGTGTACCGA 59.893 50.000 0.00 0.00 0.00 4.69
46 47 0.320334 TGCCATGTGTGTGTACCGAG 60.320 55.000 0.00 0.00 0.00 4.63
47 48 0.320421 GCCATGTGTGTGTACCGAGT 60.320 55.000 0.00 0.00 0.00 4.18
48 49 1.876416 GCCATGTGTGTGTACCGAGTT 60.876 52.381 0.00 0.00 0.00 3.01
49 50 1.798223 CCATGTGTGTGTACCGAGTTG 59.202 52.381 0.00 0.00 0.00 3.16
50 51 1.194547 CATGTGTGTGTACCGAGTTGC 59.805 52.381 0.00 0.00 0.00 4.17
51 52 0.531090 TGTGTGTGTACCGAGTTGCC 60.531 55.000 0.00 0.00 0.00 4.52
52 53 0.531090 GTGTGTGTACCGAGTTGCCA 60.531 55.000 0.00 0.00 0.00 4.92
53 54 0.531090 TGTGTGTACCGAGTTGCCAC 60.531 55.000 0.00 0.00 0.00 5.01
54 55 1.300311 TGTGTACCGAGTTGCCACG 60.300 57.895 0.00 0.00 0.00 4.94
55 56 1.300388 GTGTACCGAGTTGCCACGT 60.300 57.895 0.00 0.00 0.00 4.49
56 57 0.877213 GTGTACCGAGTTGCCACGTT 60.877 55.000 0.00 0.00 0.00 3.99
57 58 0.598158 TGTACCGAGTTGCCACGTTC 60.598 55.000 0.00 0.00 0.00 3.95
58 59 1.372004 TACCGAGTTGCCACGTTCG 60.372 57.895 0.00 0.00 0.00 3.95
59 60 4.072088 CCGAGTTGCCACGTTCGC 62.072 66.667 0.00 0.00 0.00 4.70
70 71 3.030308 CGTTCGCGTCAGTGCAGT 61.030 61.111 5.77 0.00 35.57 4.40
71 72 2.585869 CGTTCGCGTCAGTGCAGTT 61.586 57.895 5.77 0.00 35.57 3.16
72 73 1.083401 GTTCGCGTCAGTGCAGTTG 60.083 57.895 5.77 0.00 34.15 3.16
73 74 2.881266 TTCGCGTCAGTGCAGTTGC 61.881 57.895 5.77 0.00 42.50 4.17
74 75 4.374702 CGCGTCAGTGCAGTTGCC 62.375 66.667 0.00 0.00 41.18 4.52
75 76 3.279116 GCGTCAGTGCAGTTGCCA 61.279 61.111 1.06 0.00 41.18 4.92
76 77 2.620112 GCGTCAGTGCAGTTGCCAT 61.620 57.895 1.06 0.00 41.18 4.40
77 78 1.499056 CGTCAGTGCAGTTGCCATC 59.501 57.895 1.06 0.00 41.18 3.51
78 79 1.878775 GTCAGTGCAGTTGCCATCC 59.121 57.895 1.06 0.00 41.18 3.51
79 80 0.890542 GTCAGTGCAGTTGCCATCCA 60.891 55.000 1.06 0.00 41.18 3.41
80 81 0.890542 TCAGTGCAGTTGCCATCCAC 60.891 55.000 1.06 0.00 41.18 4.02
81 82 1.151221 AGTGCAGTTGCCATCCACA 59.849 52.632 1.06 0.00 41.18 4.17
82 83 0.467844 AGTGCAGTTGCCATCCACAA 60.468 50.000 1.06 0.00 41.18 3.33
83 84 0.038892 GTGCAGTTGCCATCCACAAG 60.039 55.000 1.06 0.00 41.18 3.16
84 85 1.180456 TGCAGTTGCCATCCACAAGG 61.180 55.000 1.06 0.00 41.18 3.61
85 86 1.181098 GCAGTTGCCATCCACAAGGT 61.181 55.000 0.00 0.00 33.47 3.50
86 87 1.886222 GCAGTTGCCATCCACAAGGTA 60.886 52.381 0.00 0.00 33.47 3.08
87 88 2.086869 CAGTTGCCATCCACAAGGTAG 58.913 52.381 0.00 0.00 35.89 3.18
88 89 1.004745 AGTTGCCATCCACAAGGTAGG 59.995 52.381 0.00 0.00 35.89 3.18
89 90 1.004277 GTTGCCATCCACAAGGTAGGA 59.996 52.381 0.00 0.00 38.50 2.94
90 91 0.911769 TGCCATCCACAAGGTAGGAG 59.088 55.000 0.00 0.00 37.34 3.69
91 92 0.912486 GCCATCCACAAGGTAGGAGT 59.088 55.000 0.00 0.00 37.34 3.85
92 93 1.407437 GCCATCCACAAGGTAGGAGTG 60.407 57.143 0.00 0.00 37.34 3.51
93 94 1.909302 CCATCCACAAGGTAGGAGTGT 59.091 52.381 0.00 0.00 37.34 3.55
94 95 2.093447 CCATCCACAAGGTAGGAGTGTC 60.093 54.545 0.00 0.00 37.34 3.67
95 96 2.391926 TCCACAAGGTAGGAGTGTCA 57.608 50.000 0.00 0.00 35.89 3.58
96 97 2.902608 TCCACAAGGTAGGAGTGTCAT 58.097 47.619 0.00 0.00 35.89 3.06
97 98 2.567169 TCCACAAGGTAGGAGTGTCATG 59.433 50.000 0.00 0.00 35.89 3.07
98 99 2.303022 CCACAAGGTAGGAGTGTCATGT 59.697 50.000 0.00 0.00 0.00 3.21
99 100 3.329386 CACAAGGTAGGAGTGTCATGTG 58.671 50.000 0.00 0.00 0.00 3.21
100 101 2.303022 ACAAGGTAGGAGTGTCATGTGG 59.697 50.000 0.00 0.00 0.00 4.17
101 102 1.573108 AGGTAGGAGTGTCATGTGGG 58.427 55.000 0.00 0.00 0.00 4.61
102 103 0.107654 GGTAGGAGTGTCATGTGGGC 60.108 60.000 0.00 0.00 0.00 5.36
103 104 0.460284 GTAGGAGTGTCATGTGGGCG 60.460 60.000 0.00 0.00 0.00 6.13
104 105 0.613572 TAGGAGTGTCATGTGGGCGA 60.614 55.000 0.00 0.00 0.00 5.54
105 106 1.003839 GGAGTGTCATGTGGGCGAA 60.004 57.895 0.00 0.00 0.00 4.70
106 107 0.605319 GGAGTGTCATGTGGGCGAAA 60.605 55.000 0.00 0.00 0.00 3.46
107 108 1.234821 GAGTGTCATGTGGGCGAAAA 58.765 50.000 0.00 0.00 0.00 2.29
108 109 1.197721 GAGTGTCATGTGGGCGAAAAG 59.802 52.381 0.00 0.00 0.00 2.27
119 120 3.339731 CGAAAAGCAGTTCGCCCA 58.660 55.556 8.58 0.00 43.38 5.36
120 121 1.082104 CGAAAAGCAGTTCGCCCAC 60.082 57.895 8.58 0.00 43.38 4.61
121 122 1.781025 CGAAAAGCAGTTCGCCCACA 61.781 55.000 8.58 0.00 43.38 4.17
122 123 0.317854 GAAAAGCAGTTCGCCCACAC 60.318 55.000 0.00 0.00 44.04 3.82
123 124 2.058829 AAAAGCAGTTCGCCCACACG 62.059 55.000 0.00 0.00 44.04 4.49
134 135 3.792047 CCACACGCGCATGACCTG 61.792 66.667 11.87 0.00 0.00 4.00
135 136 3.792047 CACACGCGCATGACCTGG 61.792 66.667 11.87 0.00 0.00 4.45
148 149 3.889692 CCTGGGTGGTGGCTGTGT 61.890 66.667 0.00 0.00 0.00 3.72
149 150 2.595463 CTGGGTGGTGGCTGTGTG 60.595 66.667 0.00 0.00 0.00 3.82
150 151 4.202574 TGGGTGGTGGCTGTGTGG 62.203 66.667 0.00 0.00 0.00 4.17
151 152 4.974721 GGGTGGTGGCTGTGTGGG 62.975 72.222 0.00 0.00 0.00 4.61
155 156 4.947147 GGTGGCTGTGTGGGCGAA 62.947 66.667 0.00 0.00 34.31 4.70
156 157 2.904866 GTGGCTGTGTGGGCGAAA 60.905 61.111 0.00 0.00 34.31 3.46
157 158 2.124109 TGGCTGTGTGGGCGAAAA 60.124 55.556 0.00 0.00 34.31 2.29
158 159 2.192861 TGGCTGTGTGGGCGAAAAG 61.193 57.895 0.00 0.00 34.31 2.27
169 170 3.339731 CGAAAAGCAGTTCGCCCA 58.660 55.556 8.58 0.00 43.38 5.36
170 171 1.082104 CGAAAAGCAGTTCGCCCAC 60.082 57.895 8.58 0.00 43.38 4.61
171 172 1.781025 CGAAAAGCAGTTCGCCCACA 61.781 55.000 8.58 0.00 43.38 4.17
172 173 0.317854 GAAAAGCAGTTCGCCCACAC 60.318 55.000 0.00 0.00 44.04 3.82
173 174 1.034838 AAAAGCAGTTCGCCCACACA 61.035 50.000 0.00 0.00 44.04 3.72
174 175 1.034838 AAAGCAGTTCGCCCACACAA 61.035 50.000 0.00 0.00 44.04 3.33
175 176 1.724582 AAGCAGTTCGCCCACACAAC 61.725 55.000 0.00 0.00 44.04 3.32
176 177 2.631428 CAGTTCGCCCACACAACG 59.369 61.111 0.00 0.00 0.00 4.10
177 178 3.276846 AGTTCGCCCACACAACGC 61.277 61.111 0.00 0.00 0.00 4.84
178 179 3.578272 GTTCGCCCACACAACGCA 61.578 61.111 0.00 0.00 0.00 5.24
179 180 3.276091 TTCGCCCACACAACGCAG 61.276 61.111 0.00 0.00 0.00 5.18
182 183 4.332637 GCCCACACAACGCAGCTG 62.333 66.667 10.11 10.11 0.00 4.24
183 184 3.663176 CCCACACAACGCAGCTGG 61.663 66.667 17.12 8.27 0.00 4.85
184 185 4.332637 CCACACAACGCAGCTGGC 62.333 66.667 17.12 6.97 39.90 4.85
185 186 3.585020 CACACAACGCAGCTGGCA 61.585 61.111 17.12 0.00 45.17 4.92
186 187 2.828095 ACACAACGCAGCTGGCAA 60.828 55.556 17.12 0.00 45.17 4.52
187 188 2.412525 CACAACGCAGCTGGCAAA 59.587 55.556 17.12 0.00 45.17 3.68
188 189 1.945662 CACAACGCAGCTGGCAAAC 60.946 57.895 17.12 0.00 45.17 2.93
189 190 2.412525 CAACGCAGCTGGCAAACA 59.587 55.556 17.12 0.00 45.17 2.83
215 216 3.679738 CGGGCGTGTGGGCAAAAT 61.680 61.111 0.00 0.00 44.56 1.82
216 217 2.261361 GGGCGTGTGGGCAAAATC 59.739 61.111 0.00 0.00 44.56 2.17
217 218 2.275380 GGGCGTGTGGGCAAAATCT 61.275 57.895 0.00 0.00 44.56 2.40
218 219 1.212751 GGCGTGTGGGCAAAATCTC 59.787 57.895 0.00 0.00 41.77 2.75
219 220 1.212751 GCGTGTGGGCAAAATCTCC 59.787 57.895 0.00 0.00 0.00 3.71
220 221 1.523154 GCGTGTGGGCAAAATCTCCA 61.523 55.000 0.00 0.00 0.00 3.86
221 222 0.958091 CGTGTGGGCAAAATCTCCAA 59.042 50.000 0.00 0.00 31.73 3.53
222 223 1.335872 CGTGTGGGCAAAATCTCCAAC 60.336 52.381 0.00 0.00 31.73 3.77
223 224 0.958091 TGTGGGCAAAATCTCCAACG 59.042 50.000 0.00 0.00 31.73 4.10
224 225 0.388520 GTGGGCAAAATCTCCAACGC 60.389 55.000 0.00 0.00 31.73 4.84
225 226 1.215382 GGGCAAAATCTCCAACGCC 59.785 57.895 0.00 0.00 38.85 5.68
226 227 1.215382 GGCAAAATCTCCAACGCCC 59.785 57.895 0.00 0.00 33.31 6.13
227 228 1.531739 GGCAAAATCTCCAACGCCCA 61.532 55.000 0.00 0.00 33.31 5.36
228 229 0.388520 GCAAAATCTCCAACGCCCAC 60.389 55.000 0.00 0.00 0.00 4.61
229 230 0.958091 CAAAATCTCCAACGCCCACA 59.042 50.000 0.00 0.00 0.00 4.17
230 231 0.958822 AAAATCTCCAACGCCCACAC 59.041 50.000 0.00 0.00 0.00 3.82
231 232 0.179004 AAATCTCCAACGCCCACACA 60.179 50.000 0.00 0.00 0.00 3.72
232 233 0.889186 AATCTCCAACGCCCACACAC 60.889 55.000 0.00 0.00 0.00 3.82
233 234 2.748058 ATCTCCAACGCCCACACACC 62.748 60.000 0.00 0.00 0.00 4.16
234 235 3.765894 CTCCAACGCCCACACACCA 62.766 63.158 0.00 0.00 0.00 4.17
235 236 3.286751 CCAACGCCCACACACCAG 61.287 66.667 0.00 0.00 0.00 4.00
236 237 3.964875 CAACGCCCACACACCAGC 61.965 66.667 0.00 0.00 0.00 4.85
245 246 3.000819 CACACCAGCCCCGTCCTA 61.001 66.667 0.00 0.00 0.00 2.94
246 247 3.001406 ACACCAGCCCCGTCCTAC 61.001 66.667 0.00 0.00 0.00 3.18
247 248 4.143333 CACCAGCCCCGTCCTACG 62.143 72.222 0.00 0.00 42.11 3.51
248 249 4.691359 ACCAGCCCCGTCCTACGT 62.691 66.667 0.00 0.00 40.58 3.57
249 250 4.143333 CCAGCCCCGTCCTACGTG 62.143 72.222 0.00 0.00 40.58 4.49
250 251 4.143333 CAGCCCCGTCCTACGTGG 62.143 72.222 0.00 0.00 42.14 4.94
253 254 4.446413 CCCCGTCCTACGTGGCAC 62.446 72.222 7.79 7.79 40.58 5.01
254 255 3.687102 CCCGTCCTACGTGGCACA 61.687 66.667 19.09 0.00 40.58 4.57
265 266 4.189539 TGGCACACCAAATCCACC 57.810 55.556 0.00 0.00 45.37 4.61
266 267 1.541169 TGGCACACCAAATCCACCT 59.459 52.632 0.00 0.00 45.37 4.00
267 268 0.105760 TGGCACACCAAATCCACCTT 60.106 50.000 0.00 0.00 45.37 3.50
268 269 1.047801 GGCACACCAAATCCACCTTT 58.952 50.000 0.00 0.00 35.26 3.11
269 270 1.416030 GGCACACCAAATCCACCTTTT 59.584 47.619 0.00 0.00 35.26 2.27
270 271 2.547855 GGCACACCAAATCCACCTTTTC 60.548 50.000 0.00 0.00 35.26 2.29
271 272 2.862140 GCACACCAAATCCACCTTTTCG 60.862 50.000 0.00 0.00 0.00 3.46
272 273 2.360801 CACACCAAATCCACCTTTTCGT 59.639 45.455 0.00 0.00 0.00 3.85
273 274 2.360801 ACACCAAATCCACCTTTTCGTG 59.639 45.455 0.00 0.00 0.00 4.35
274 275 2.360801 CACCAAATCCACCTTTTCGTGT 59.639 45.455 0.00 0.00 31.47 4.49
275 276 2.621526 ACCAAATCCACCTTTTCGTGTC 59.378 45.455 0.00 0.00 31.47 3.67
276 277 2.621055 CCAAATCCACCTTTTCGTGTCA 59.379 45.455 0.00 0.00 31.47 3.58
277 278 3.067461 CCAAATCCACCTTTTCGTGTCAA 59.933 43.478 0.00 0.00 31.47 3.18
278 279 4.290155 CAAATCCACCTTTTCGTGTCAAG 58.710 43.478 0.00 0.00 31.47 3.02
279 280 2.992124 TCCACCTTTTCGTGTCAAGA 57.008 45.000 0.00 0.00 31.47 3.02
280 281 3.485463 TCCACCTTTTCGTGTCAAGAT 57.515 42.857 0.00 0.00 31.47 2.40
281 282 3.815809 TCCACCTTTTCGTGTCAAGATT 58.184 40.909 0.00 0.00 31.47 2.40
282 283 3.813166 TCCACCTTTTCGTGTCAAGATTC 59.187 43.478 0.00 0.00 31.47 2.52
283 284 3.363970 CCACCTTTTCGTGTCAAGATTCG 60.364 47.826 0.00 0.00 31.47 3.34
284 285 3.247648 CACCTTTTCGTGTCAAGATTCGT 59.752 43.478 0.00 0.00 0.00 3.85
285 286 3.247648 ACCTTTTCGTGTCAAGATTCGTG 59.752 43.478 0.00 0.00 0.00 4.35
286 287 2.941891 TTTCGTGTCAAGATTCGTGC 57.058 45.000 0.00 0.00 0.00 5.34
287 288 1.859383 TTCGTGTCAAGATTCGTGCA 58.141 45.000 0.00 0.00 0.00 4.57
288 289 1.859383 TCGTGTCAAGATTCGTGCAA 58.141 45.000 0.00 0.00 0.00 4.08
289 290 2.205911 TCGTGTCAAGATTCGTGCAAA 58.794 42.857 0.00 0.00 0.00 3.68
290 291 2.609916 TCGTGTCAAGATTCGTGCAAAA 59.390 40.909 0.00 0.00 0.00 2.44
291 292 2.966708 CGTGTCAAGATTCGTGCAAAAG 59.033 45.455 0.00 0.00 0.00 2.27
292 293 3.303066 CGTGTCAAGATTCGTGCAAAAGA 60.303 43.478 0.00 0.00 0.00 2.52
293 294 3.968724 GTGTCAAGATTCGTGCAAAAGAC 59.031 43.478 0.00 0.00 0.00 3.01
294 295 3.625313 TGTCAAGATTCGTGCAAAAGACA 59.375 39.130 0.00 0.00 0.00 3.41
295 296 4.214437 GTCAAGATTCGTGCAAAAGACAG 58.786 43.478 0.00 0.00 0.00 3.51
296 297 3.876914 TCAAGATTCGTGCAAAAGACAGT 59.123 39.130 0.00 0.00 0.00 3.55
297 298 3.885484 AGATTCGTGCAAAAGACAGTG 57.115 42.857 0.00 0.00 0.00 3.66
298 299 3.466836 AGATTCGTGCAAAAGACAGTGA 58.533 40.909 0.00 0.00 0.00 3.41
299 300 3.876914 AGATTCGTGCAAAAGACAGTGAA 59.123 39.130 0.00 0.00 0.00 3.18
300 301 3.398954 TTCGTGCAAAAGACAGTGAAC 57.601 42.857 0.00 0.00 0.00 3.18
301 302 1.326245 TCGTGCAAAAGACAGTGAACG 59.674 47.619 0.00 0.00 46.25 3.95
302 303 1.594518 CGTGCAAAAGACAGTGAACGG 60.595 52.381 0.00 0.00 42.08 4.44
303 304 0.380378 TGCAAAAGACAGTGAACGGC 59.620 50.000 0.00 0.00 0.00 5.68
304 305 0.657368 GCAAAAGACAGTGAACGGCG 60.657 55.000 4.80 4.80 0.00 6.46
305 306 0.934496 CAAAAGACAGTGAACGGCGA 59.066 50.000 16.62 0.00 0.00 5.54
306 307 1.531149 CAAAAGACAGTGAACGGCGAT 59.469 47.619 16.62 0.00 0.00 4.58
307 308 1.429463 AAAGACAGTGAACGGCGATC 58.571 50.000 16.62 13.16 0.00 3.69
308 309 0.389948 AAGACAGTGAACGGCGATCC 60.390 55.000 16.62 5.68 0.00 3.36
325 326 4.657824 CGGACGTGTGGGCGAGTT 62.658 66.667 0.00 0.00 35.59 3.01
326 327 3.041940 GGACGTGTGGGCGAGTTG 61.042 66.667 0.00 0.00 35.59 3.16
327 328 3.041940 GACGTGTGGGCGAGTTGG 61.042 66.667 0.00 0.00 35.59 3.77
328 329 4.619227 ACGTGTGGGCGAGTTGGG 62.619 66.667 0.00 0.00 35.59 4.12
329 330 4.619227 CGTGTGGGCGAGTTGGGT 62.619 66.667 0.00 0.00 0.00 4.51
330 331 2.745037 GTGTGGGCGAGTTGGGTA 59.255 61.111 0.00 0.00 0.00 3.69
331 332 1.071814 GTGTGGGCGAGTTGGGTAA 59.928 57.895 0.00 0.00 0.00 2.85
332 333 1.071814 TGTGGGCGAGTTGGGTAAC 59.928 57.895 0.00 0.00 37.06 2.50
333 334 2.030958 GTGGGCGAGTTGGGTAACG 61.031 63.158 0.00 0.00 41.71 3.18
353 354 3.240203 CACACGTGTGGGCGTTAG 58.760 61.111 35.65 12.08 43.83 2.34
354 355 1.593209 CACACGTGTGGGCGTTAGT 60.593 57.895 35.65 1.12 43.83 2.24
355 356 1.593209 ACACGTGTGGGCGTTAGTG 60.593 57.895 22.71 0.00 43.83 2.74
356 357 1.593209 CACGTGTGGGCGTTAGTGT 60.593 57.895 7.58 0.00 43.83 3.55
357 358 1.144496 ACGTGTGGGCGTTAGTGTT 59.856 52.632 0.00 0.00 43.04 3.32
358 359 0.462403 ACGTGTGGGCGTTAGTGTTT 60.462 50.000 0.00 0.00 43.04 2.83
359 360 0.658897 CGTGTGGGCGTTAGTGTTTT 59.341 50.000 0.00 0.00 0.00 2.43
360 361 1.333435 CGTGTGGGCGTTAGTGTTTTC 60.333 52.381 0.00 0.00 0.00 2.29
361 362 0.938713 TGTGGGCGTTAGTGTTTTCG 59.061 50.000 0.00 0.00 0.00 3.46
362 363 1.219646 GTGGGCGTTAGTGTTTTCGA 58.780 50.000 0.00 0.00 0.00 3.71
363 364 1.598601 GTGGGCGTTAGTGTTTTCGAA 59.401 47.619 0.00 0.00 0.00 3.71
364 365 2.031930 GTGGGCGTTAGTGTTTTCGAAA 59.968 45.455 6.47 6.47 0.00 3.46
365 366 2.288458 TGGGCGTTAGTGTTTTCGAAAG 59.712 45.455 10.98 0.00 0.00 2.62
366 367 2.545106 GGGCGTTAGTGTTTTCGAAAGA 59.455 45.455 10.98 0.00 39.20 2.52
380 381 2.159627 TCGAAAGAAAAAGATGCCGAGC 59.840 45.455 0.00 0.00 37.03 5.03
381 382 2.729156 CGAAAGAAAAAGATGCCGAGCC 60.729 50.000 0.00 0.00 0.00 4.70
382 383 1.909700 AAGAAAAAGATGCCGAGCCA 58.090 45.000 0.00 0.00 0.00 4.75
383 384 1.457346 AGAAAAAGATGCCGAGCCAG 58.543 50.000 0.00 0.00 0.00 4.85
384 385 1.003580 AGAAAAAGATGCCGAGCCAGA 59.996 47.619 0.00 0.00 0.00 3.86
385 386 1.399791 GAAAAAGATGCCGAGCCAGAG 59.600 52.381 0.00 0.00 0.00 3.35
386 387 1.028868 AAAAGATGCCGAGCCAGAGC 61.029 55.000 0.00 0.00 40.32 4.09
387 388 3.729965 AAGATGCCGAGCCAGAGCG 62.730 63.158 0.00 0.00 46.67 5.03
388 389 4.521062 GATGCCGAGCCAGAGCGT 62.521 66.667 0.00 0.00 46.67 5.07
389 390 4.827087 ATGCCGAGCCAGAGCGTG 62.827 66.667 0.00 0.00 46.67 5.34
409 410 3.061848 CGACCGGGCAAGCCAATT 61.062 61.111 8.76 0.00 37.98 2.32
410 411 2.573340 GACCGGGCAAGCCAATTG 59.427 61.111 13.87 0.00 42.20 2.32
411 412 2.203625 ACCGGGCAAGCCAATTGT 60.204 55.556 13.87 1.02 41.29 2.71
412 413 2.262292 CCGGGCAAGCCAATTGTG 59.738 61.111 13.87 0.00 41.29 3.33
413 414 2.432972 CGGGCAAGCCAATTGTGC 60.433 61.111 13.87 10.27 41.29 4.57
414 415 2.934570 CGGGCAAGCCAATTGTGCT 61.935 57.895 13.87 15.02 41.29 4.40
415 416 1.375013 GGGCAAGCCAATTGTGCTG 60.375 57.895 18.34 14.04 41.29 4.41
416 417 2.030958 GGCAAGCCAATTGTGCTGC 61.031 57.895 18.34 19.96 41.29 5.25
417 418 1.301087 GCAAGCCAATTGTGCTGCA 60.301 52.632 18.34 0.00 41.29 4.41
418 419 1.289109 GCAAGCCAATTGTGCTGCAG 61.289 55.000 18.34 10.11 41.29 4.41
419 420 1.005394 AAGCCAATTGTGCTGCAGC 60.005 52.632 31.89 31.89 39.48 5.25
420 421 2.433664 GCCAATTGTGCTGCAGCC 60.434 61.111 34.64 25.13 41.18 4.85
421 422 2.263540 CCAATTGTGCTGCAGCCC 59.736 61.111 34.64 25.41 41.18 5.19
422 423 2.126228 CAATTGTGCTGCAGCCCG 60.126 61.111 34.64 13.24 41.18 6.13
423 424 4.060038 AATTGTGCTGCAGCCCGC 62.060 61.111 34.64 23.90 41.18 6.13
443 444 2.123897 AGCCTGCGTGGGTGTTTT 60.124 55.556 0.00 0.00 46.19 2.43
444 445 1.149627 AGCCTGCGTGGGTGTTTTA 59.850 52.632 0.00 0.00 46.19 1.52
445 446 1.170290 AGCCTGCGTGGGTGTTTTAC 61.170 55.000 0.00 0.00 46.19 2.01
446 447 1.572447 CCTGCGTGGGTGTTTTACG 59.428 57.895 0.00 0.00 40.52 3.18
466 467 0.035439 CCAGGTTTGGGCACGTAGAT 60.035 55.000 0.00 0.00 41.05 1.98
529 535 2.320215 CGTCGCCCGGTAGTATACA 58.680 57.895 5.50 0.00 45.43 2.29
532 538 0.466007 TCGCCCGGTAGTATACAGCA 60.466 55.000 5.50 0.00 45.43 4.41
551 557 2.922335 GCAAAGTCGAAATCAACTGGCC 60.922 50.000 0.00 0.00 0.00 5.36
574 595 4.097361 GGAGGTCTCCGCCCCAAC 62.097 72.222 0.77 0.00 40.36 3.77
602 623 3.567797 GCCGTCTCCGCTGCAATC 61.568 66.667 0.00 0.00 0.00 2.67
603 624 2.185350 CCGTCTCCGCTGCAATCT 59.815 61.111 0.00 0.00 0.00 2.40
604 625 1.448540 CCGTCTCCGCTGCAATCTT 60.449 57.895 0.00 0.00 0.00 2.40
605 626 1.424493 CCGTCTCCGCTGCAATCTTC 61.424 60.000 0.00 0.00 0.00 2.87
606 627 1.746727 CGTCTCCGCTGCAATCTTCG 61.747 60.000 0.00 0.00 0.00 3.79
607 628 1.811266 TCTCCGCTGCAATCTTCGC 60.811 57.895 0.00 0.00 0.00 4.70
617 638 0.874175 CAATCTTCGCCGTCGCCATA 60.874 55.000 0.00 0.00 35.26 2.74
620 641 1.299850 CTTCGCCGTCGCCATATCA 60.300 57.895 0.00 0.00 35.26 2.15
623 644 1.080501 CGCCGTCGCCATATCATCT 60.081 57.895 0.00 0.00 0.00 2.90
629 650 2.476619 CGTCGCCATATCATCTGTTTCC 59.523 50.000 0.00 0.00 0.00 3.13
633 654 3.496130 CGCCATATCATCTGTTTCCACTC 59.504 47.826 0.00 0.00 0.00 3.51
635 656 3.496130 CCATATCATCTGTTTCCACTCGC 59.504 47.826 0.00 0.00 0.00 5.03
661 682 5.012239 TCCGTCAGGTATACATATACACCC 58.988 45.833 5.01 0.00 40.16 4.61
662 683 5.014858 CCGTCAGGTATACATATACACCCT 58.985 45.833 5.01 0.00 40.16 4.34
663 684 6.012596 TCCGTCAGGTATACATATACACCCTA 60.013 42.308 5.01 0.00 40.16 3.53
685 706 2.036089 CCTAGCTAGGTCAACCGAATCC 59.964 54.545 28.90 0.00 42.08 3.01
687 708 1.757699 AGCTAGGTCAACCGAATCCTC 59.242 52.381 0.00 0.00 42.08 3.71
689 743 0.458669 TAGGTCAACCGAATCCTCGC 59.541 55.000 0.00 0.00 44.04 5.03
691 745 1.079405 GTCAACCGAATCCTCGCCA 60.079 57.895 0.00 0.00 44.04 5.69
695 749 0.541863 AACCGAATCCTCGCCATCTT 59.458 50.000 0.00 0.00 44.04 2.40
696 750 0.179073 ACCGAATCCTCGCCATCTTG 60.179 55.000 0.00 0.00 44.04 3.02
697 751 0.179073 CCGAATCCTCGCCATCTTGT 60.179 55.000 0.00 0.00 44.04 3.16
700 754 3.393800 CGAATCCTCGCCATCTTGTATT 58.606 45.455 0.00 0.00 38.45 1.89
702 756 3.845781 ATCCTCGCCATCTTGTATTGT 57.154 42.857 0.00 0.00 0.00 2.71
706 760 3.310774 CCTCGCCATCTTGTATTGTTCAG 59.689 47.826 0.00 0.00 0.00 3.02
708 762 2.223340 CGCCATCTTGTATTGTTCAGCC 60.223 50.000 0.00 0.00 0.00 4.85
711 765 4.188462 CCATCTTGTATTGTTCAGCCGTA 58.812 43.478 0.00 0.00 0.00 4.02
713 767 5.989168 CCATCTTGTATTGTTCAGCCGTATA 59.011 40.000 0.00 0.00 0.00 1.47
714 768 6.073765 CCATCTTGTATTGTTCAGCCGTATAC 60.074 42.308 0.00 0.00 0.00 1.47
716 770 6.636705 TCTTGTATTGTTCAGCCGTATACTT 58.363 36.000 0.56 0.00 0.00 2.24
719 773 6.167685 TGTATTGTTCAGCCGTATACTTTGT 58.832 36.000 0.56 0.00 0.00 2.83
722 776 6.656314 TTGTTCAGCCGTATACTTTGTATG 57.344 37.500 0.56 0.00 0.00 2.39
723 777 5.113383 TGTTCAGCCGTATACTTTGTATGG 58.887 41.667 0.56 0.00 0.00 2.74
728 782 4.080751 AGCCGTATACTTTGTATGGTTGGT 60.081 41.667 0.56 0.00 32.02 3.67
729 783 4.034742 GCCGTATACTTTGTATGGTTGGTG 59.965 45.833 0.56 0.00 32.02 4.17
730 784 5.180271 CCGTATACTTTGTATGGTTGGTGT 58.820 41.667 0.56 0.00 0.00 4.16
731 785 5.644636 CCGTATACTTTGTATGGTTGGTGTT 59.355 40.000 0.56 0.00 0.00 3.32
732 786 6.149807 CCGTATACTTTGTATGGTTGGTGTTT 59.850 38.462 0.56 0.00 0.00 2.83
733 787 7.308710 CCGTATACTTTGTATGGTTGGTGTTTT 60.309 37.037 0.56 0.00 0.00 2.43
734 788 8.719648 CGTATACTTTGTATGGTTGGTGTTTTA 58.280 33.333 0.56 0.00 0.00 1.52
746 800 7.932335 TGGTTGGTGTTTTATATATAAAGCGG 58.068 34.615 20.48 0.00 36.59 5.52
747 801 7.013464 TGGTTGGTGTTTTATATATAAAGCGGG 59.987 37.037 20.48 0.00 36.59 6.13
748 802 7.364970 GTTGGTGTTTTATATATAAAGCGGGG 58.635 38.462 20.48 0.00 36.59 5.73
749 803 5.474189 TGGTGTTTTATATATAAAGCGGGGC 59.526 40.000 20.48 13.21 36.59 5.80
750 804 5.391203 GGTGTTTTATATATAAAGCGGGGCG 60.391 44.000 20.48 0.00 36.59 6.13
753 807 6.485984 TGTTTTATATATAAAGCGGGGCGAAA 59.514 34.615 20.48 4.74 36.59 3.46
755 809 6.484818 TTATATATAAAGCGGGGCGAAAAC 57.515 37.500 2.56 0.00 0.00 2.43
757 811 0.323087 ATAAAGCGGGGCGAAAACCT 60.323 50.000 0.00 0.00 0.00 3.50
758 812 1.238625 TAAAGCGGGGCGAAAACCTG 61.239 55.000 0.00 0.00 37.43 4.00
760 814 3.292159 GCGGGGCGAAAACCTGTT 61.292 61.111 0.00 0.00 36.71 3.16
761 815 2.852180 GCGGGGCGAAAACCTGTTT 61.852 57.895 0.00 0.00 36.71 2.83
774 828 2.968675 ACCTGTTTCGAGGTTATTCCG 58.031 47.619 0.00 0.00 44.53 4.30
776 830 3.511146 ACCTGTTTCGAGGTTATTCCGTA 59.489 43.478 0.00 0.00 44.53 4.02
777 831 4.161001 ACCTGTTTCGAGGTTATTCCGTAT 59.839 41.667 0.00 0.00 44.53 3.06
786 1391 5.522460 CGAGGTTATTCCGTATCAATGTTGT 59.478 40.000 0.00 0.00 41.99 3.32
810 1435 4.458989 TGAAGTCACTGGGATTTTGTATGC 59.541 41.667 0.00 0.00 0.00 3.14
814 1439 5.183904 AGTCACTGGGATTTTGTATGCTTTC 59.816 40.000 0.00 0.00 0.00 2.62
866 1494 6.780031 ACTAGCATATCAGGATCTTGTACTGT 59.220 38.462 4.57 0.00 39.96 3.55
907 1537 7.162761 TCTGTTATTCGGTCCATTGTTCTAAA 58.837 34.615 0.00 0.00 0.00 1.85
908 1538 7.118680 TCTGTTATTCGGTCCATTGTTCTAAAC 59.881 37.037 0.00 0.00 0.00 2.01
909 1539 6.938030 TGTTATTCGGTCCATTGTTCTAAACT 59.062 34.615 0.00 0.00 0.00 2.66
910 1540 7.446013 TGTTATTCGGTCCATTGTTCTAAACTT 59.554 33.333 0.00 0.00 0.00 2.66
911 1541 6.894339 ATTCGGTCCATTGTTCTAAACTTT 57.106 33.333 0.00 0.00 0.00 2.66
912 1542 6.702716 TTCGGTCCATTGTTCTAAACTTTT 57.297 33.333 0.00 0.00 0.00 2.27
913 1543 7.804843 TTCGGTCCATTGTTCTAAACTTTTA 57.195 32.000 0.00 0.00 0.00 1.52
914 1544 7.804843 TCGGTCCATTGTTCTAAACTTTTAA 57.195 32.000 0.00 0.00 0.00 1.52
936 1573 5.743636 ATACATGCCTTTGTTTGGTGATT 57.256 34.783 0.00 0.00 0.00 2.57
1026 1671 2.615227 GATTGCGAGGGTGGCCAGAT 62.615 60.000 5.11 0.00 0.00 2.90
1183 1828 0.324738 TCTCCGGCCTGATGTCTCTT 60.325 55.000 0.00 0.00 0.00 2.85
1197 1842 1.195674 GTCTCTTTGTGCTTTCCTCGC 59.804 52.381 0.00 0.00 0.00 5.03
1231 1876 1.871039 CCAACAACCTGGTACGAACAG 59.129 52.381 0.00 0.00 35.74 3.16
1293 1938 2.426024 CCATTGCTGTCAGATTCCCTTG 59.574 50.000 3.32 0.00 0.00 3.61
1442 2329 1.548719 TGTTAGTGTCTCATCCCCACG 59.451 52.381 0.00 0.00 34.34 4.94
1443 2330 1.549170 GTTAGTGTCTCATCCCCACGT 59.451 52.381 0.00 0.00 34.34 4.49
1525 2412 7.181569 TCACCTAACTCACATATCATTGTCA 57.818 36.000 0.00 0.00 0.00 3.58
1849 4031 1.136305 TCTTCCGCCTTGACTTATCGG 59.864 52.381 0.00 0.00 41.30 4.18
2013 4196 3.153919 TGACTCTAAACATTGGGTTGCC 58.846 45.455 0.00 0.00 40.35 4.52
2133 4316 1.302949 GGTTGTCCCTGGCATGCTA 59.697 57.895 18.92 11.28 0.00 3.49
2154 4337 1.140052 TCGTTCTGTTGGTGATGGTGT 59.860 47.619 0.00 0.00 0.00 4.16
2160 4343 3.148412 CTGTTGGTGATGGTGTTGATCA 58.852 45.455 0.00 0.00 0.00 2.92
2256 4449 7.915397 GCCAGTTGTTAATCAATGAATTCGTAT 59.085 33.333 0.00 0.00 38.38 3.06
2395 4590 6.050432 TGTAACTACAAACTGAACCACGAAT 58.950 36.000 0.00 0.00 32.40 3.34
2412 4607 3.367932 ACGAATGTTCACATAAGCTCGTG 59.632 43.478 13.82 4.86 41.58 4.35
2462 4763 6.139679 ACATTTGGAAGTTGGATAGAAGGA 57.860 37.500 0.00 0.00 0.00 3.36
2491 4792 6.334202 TGTACATTGAAACCTTTTGTGTTCC 58.666 36.000 0.00 0.00 0.00 3.62
2495 4796 6.939730 ACATTGAAACCTTTTGTGTTCCTTTT 59.060 30.769 0.00 0.00 0.00 2.27
2538 4839 6.487668 TGTTATCATTAGTGAGGAATGCATGG 59.512 38.462 0.00 0.00 37.87 3.66
2579 4880 1.334869 GCACTTATGGAGGCATTTCCG 59.665 52.381 0.00 0.00 40.27 4.30
2642 5000 7.379262 GGTACCGTTTATCGTTCATTTGTTTTT 59.621 33.333 0.00 0.00 37.94 1.94
2749 5108 8.198109 TGGCTTATAAATCTCTATCGGATAAGC 58.802 37.037 12.94 12.94 44.77 3.09
2754 5113 5.811399 AATCTCTATCGGATAAGCTCTCG 57.189 43.478 0.00 0.00 0.00 4.04
2763 5122 0.181114 ATAAGCTCTCGCAATGGCCA 59.819 50.000 8.56 8.56 39.10 5.36
2798 5157 7.485913 CAGATTGCATTTCACACATTACTTACC 59.514 37.037 0.00 0.00 0.00 2.85
2800 5159 6.892658 TGCATTTCACACATTACTTACCTT 57.107 33.333 0.00 0.00 0.00 3.50
2801 5160 7.283625 TGCATTTCACACATTACTTACCTTT 57.716 32.000 0.00 0.00 0.00 3.11
2919 5284 6.148948 TGCATTTCACAAAGTACTTACATGC 58.851 36.000 8.92 13.22 35.04 4.06
2960 5344 0.466007 TGGCTTGCAGCTGAGAACAA 60.466 50.000 20.43 11.07 41.99 2.83
2964 5348 2.857489 GCTTGCAGCTGAGAACAACTTG 60.857 50.000 20.43 1.81 38.45 3.16
2965 5349 0.664761 TGCAGCTGAGAACAACTTGC 59.335 50.000 20.43 0.00 0.00 4.01
2966 5350 0.664761 GCAGCTGAGAACAACTTGCA 59.335 50.000 20.43 0.00 33.32 4.08
2967 5351 1.334779 GCAGCTGAGAACAACTTGCAG 60.335 52.381 20.43 0.00 33.32 4.41
2968 5352 1.945394 CAGCTGAGAACAACTTGCAGT 59.055 47.619 8.42 0.00 33.32 4.40
2969 5353 1.945394 AGCTGAGAACAACTTGCAGTG 59.055 47.619 0.00 0.00 33.32 3.66
2970 5354 1.942657 GCTGAGAACAACTTGCAGTGA 59.057 47.619 0.00 0.00 0.00 3.41
2971 5355 2.355756 GCTGAGAACAACTTGCAGTGAA 59.644 45.455 0.00 0.00 0.00 3.18
2972 5356 3.181497 GCTGAGAACAACTTGCAGTGAAA 60.181 43.478 0.00 0.00 0.00 2.69
2973 5357 4.675146 GCTGAGAACAACTTGCAGTGAAAA 60.675 41.667 0.00 0.00 0.00 2.29
3090 5510 1.777101 GCTCATGGTAGAGTCGATGC 58.223 55.000 0.00 0.00 37.94 3.91
3092 5512 1.683385 CTCATGGTAGAGTCGATGCCA 59.317 52.381 0.00 0.00 36.82 4.92
3094 5514 3.496331 TCATGGTAGAGTCGATGCCATA 58.504 45.455 6.78 0.00 40.68 2.74
3095 5515 3.255888 TCATGGTAGAGTCGATGCCATAC 59.744 47.826 6.78 0.00 40.68 2.39
3121 5541 3.068024 TGCCTCTCCAAAAACATTGTGTC 59.932 43.478 0.00 0.00 0.00 3.67
3122 5542 3.552890 GCCTCTCCAAAAACATTGTGTCC 60.553 47.826 0.00 0.00 0.00 4.02
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 4.689345 GTGATTCTTTACTACACGGCAACT 59.311 41.667 0.00 0.00 0.00 3.16
1 2 4.449743 TGTGATTCTTTACTACACGGCAAC 59.550 41.667 0.00 0.00 34.72 4.17
6 7 5.389516 GGCAACTGTGATTCTTTACTACACG 60.390 44.000 0.00 0.00 34.72 4.49
7 8 5.468746 TGGCAACTGTGATTCTTTACTACAC 59.531 40.000 0.00 0.00 37.61 2.90
8 9 5.616270 TGGCAACTGTGATTCTTTACTACA 58.384 37.500 0.00 0.00 37.61 2.74
9 10 6.149474 ACATGGCAACTGTGATTCTTTACTAC 59.851 38.462 0.00 0.00 37.61 2.73
10 11 6.149308 CACATGGCAACTGTGATTCTTTACTA 59.851 38.462 14.55 0.00 45.44 1.82
11 12 5.048504 CACATGGCAACTGTGATTCTTTACT 60.049 40.000 14.55 0.00 45.44 2.24
12 13 5.156355 CACATGGCAACTGTGATTCTTTAC 58.844 41.667 14.55 0.00 45.44 2.01
13 14 4.826733 ACACATGGCAACTGTGATTCTTTA 59.173 37.500 23.92 0.00 45.44 1.85
14 15 3.638160 ACACATGGCAACTGTGATTCTTT 59.362 39.130 23.92 1.82 45.44 2.52
15 16 3.005050 CACACATGGCAACTGTGATTCTT 59.995 43.478 23.92 2.47 45.44 2.52
16 17 2.555325 CACACATGGCAACTGTGATTCT 59.445 45.455 23.92 2.80 45.44 2.40
17 18 2.294233 ACACACATGGCAACTGTGATTC 59.706 45.455 26.05 0.00 45.44 2.52
18 19 2.034939 CACACACATGGCAACTGTGATT 59.965 45.455 26.05 12.08 45.44 2.57
19 20 1.610038 CACACACATGGCAACTGTGAT 59.390 47.619 26.05 13.28 45.44 3.06
20 21 1.023502 CACACACATGGCAACTGTGA 58.976 50.000 26.05 0.00 45.44 3.58
22 23 1.946768 GTACACACACATGGCAACTGT 59.053 47.619 0.00 0.00 37.61 3.55
23 24 1.266718 GGTACACACACATGGCAACTG 59.733 52.381 0.00 0.00 37.61 3.16
24 25 1.604604 GGTACACACACATGGCAACT 58.395 50.000 0.00 0.00 37.61 3.16
25 26 0.237235 CGGTACACACACATGGCAAC 59.763 55.000 0.00 0.00 0.00 4.17
26 27 0.106894 TCGGTACACACACATGGCAA 59.893 50.000 0.00 0.00 0.00 4.52
27 28 0.320334 CTCGGTACACACACATGGCA 60.320 55.000 0.00 0.00 0.00 4.92
28 29 0.320421 ACTCGGTACACACACATGGC 60.320 55.000 0.00 0.00 0.00 4.40
29 30 1.798223 CAACTCGGTACACACACATGG 59.202 52.381 0.00 0.00 0.00 3.66
30 31 1.194547 GCAACTCGGTACACACACATG 59.805 52.381 0.00 0.00 0.00 3.21
31 32 1.508632 GCAACTCGGTACACACACAT 58.491 50.000 0.00 0.00 0.00 3.21
32 33 0.531090 GGCAACTCGGTACACACACA 60.531 55.000 0.00 0.00 0.00 3.72
33 34 0.531090 TGGCAACTCGGTACACACAC 60.531 55.000 0.00 0.00 37.61 3.82
34 35 0.531090 GTGGCAACTCGGTACACACA 60.531 55.000 0.00 0.00 37.61 3.72
35 36 2.231820 GTGGCAACTCGGTACACAC 58.768 57.895 0.00 0.00 37.61 3.82
36 37 4.762825 GTGGCAACTCGGTACACA 57.237 55.556 0.00 0.00 37.61 3.72
54 55 1.083401 CAACTGCACTGACGCGAAC 60.083 57.895 15.93 7.16 33.35 3.95
55 56 2.881266 GCAACTGCACTGACGCGAA 61.881 57.895 15.93 0.00 41.59 4.70
56 57 3.337889 GCAACTGCACTGACGCGA 61.338 61.111 15.93 0.00 41.59 5.87
57 58 4.374702 GGCAACTGCACTGACGCG 62.375 66.667 3.53 3.53 44.36 6.01
58 59 2.518836 GATGGCAACTGCACTGACGC 62.519 60.000 3.76 0.00 44.36 5.19
59 60 1.499056 GATGGCAACTGCACTGACG 59.501 57.895 3.76 0.00 44.36 4.35
60 61 0.890542 TGGATGGCAACTGCACTGAC 60.891 55.000 3.76 0.00 44.36 3.51
61 62 0.890542 GTGGATGGCAACTGCACTGA 60.891 55.000 5.60 0.00 44.36 3.41
62 63 1.174078 TGTGGATGGCAACTGCACTG 61.174 55.000 12.88 0.00 44.36 3.66
63 64 0.467844 TTGTGGATGGCAACTGCACT 60.468 50.000 12.88 0.00 44.36 4.40
64 65 0.038892 CTTGTGGATGGCAACTGCAC 60.039 55.000 5.86 5.86 44.36 4.57
65 66 1.180456 CCTTGTGGATGGCAACTGCA 61.180 55.000 3.76 0.00 38.06 4.41
66 67 1.181098 ACCTTGTGGATGGCAACTGC 61.181 55.000 0.00 0.00 37.42 4.40
67 68 2.086869 CTACCTTGTGGATGGCAACTG 58.913 52.381 0.00 0.00 37.04 3.16
68 69 1.004745 CCTACCTTGTGGATGGCAACT 59.995 52.381 0.00 0.00 37.04 3.16
69 70 1.004277 TCCTACCTTGTGGATGGCAAC 59.996 52.381 0.00 0.00 37.04 4.17
70 71 1.281867 CTCCTACCTTGTGGATGGCAA 59.718 52.381 0.00 0.00 37.04 4.52
71 72 0.911769 CTCCTACCTTGTGGATGGCA 59.088 55.000 0.00 0.00 37.04 4.92
72 73 0.912486 ACTCCTACCTTGTGGATGGC 59.088 55.000 0.00 0.00 37.04 4.40
73 74 1.909302 ACACTCCTACCTTGTGGATGG 59.091 52.381 0.00 0.00 36.16 3.51
74 75 2.567169 TGACACTCCTACCTTGTGGATG 59.433 50.000 0.00 0.00 36.16 3.51
75 76 2.902608 TGACACTCCTACCTTGTGGAT 58.097 47.619 0.00 0.00 36.16 3.41
76 77 2.391926 TGACACTCCTACCTTGTGGA 57.608 50.000 0.00 0.00 36.16 4.02
77 78 2.303022 ACATGACACTCCTACCTTGTGG 59.697 50.000 0.00 0.00 36.16 4.17
78 79 3.329386 CACATGACACTCCTACCTTGTG 58.671 50.000 0.00 0.00 37.67 3.33
79 80 2.303022 CCACATGACACTCCTACCTTGT 59.697 50.000 0.00 0.00 0.00 3.16
80 81 2.355108 CCCACATGACACTCCTACCTTG 60.355 54.545 0.00 0.00 0.00 3.61
81 82 1.909302 CCCACATGACACTCCTACCTT 59.091 52.381 0.00 0.00 0.00 3.50
82 83 1.573108 CCCACATGACACTCCTACCT 58.427 55.000 0.00 0.00 0.00 3.08
83 84 0.107654 GCCCACATGACACTCCTACC 60.108 60.000 0.00 0.00 0.00 3.18
84 85 0.460284 CGCCCACATGACACTCCTAC 60.460 60.000 0.00 0.00 0.00 3.18
85 86 0.613572 TCGCCCACATGACACTCCTA 60.614 55.000 0.00 0.00 0.00 2.94
86 87 1.480212 TTCGCCCACATGACACTCCT 61.480 55.000 0.00 0.00 0.00 3.69
87 88 0.605319 TTTCGCCCACATGACACTCC 60.605 55.000 0.00 0.00 0.00 3.85
88 89 1.197721 CTTTTCGCCCACATGACACTC 59.802 52.381 0.00 0.00 0.00 3.51
89 90 1.238439 CTTTTCGCCCACATGACACT 58.762 50.000 0.00 0.00 0.00 3.55
90 91 0.387239 GCTTTTCGCCCACATGACAC 60.387 55.000 0.00 0.00 0.00 3.67
91 92 0.821301 TGCTTTTCGCCCACATGACA 60.821 50.000 0.00 0.00 38.05 3.58
92 93 0.109597 CTGCTTTTCGCCCACATGAC 60.110 55.000 0.00 0.00 38.05 3.06
93 94 0.537143 ACTGCTTTTCGCCCACATGA 60.537 50.000 0.00 0.00 38.05 3.07
94 95 0.314935 AACTGCTTTTCGCCCACATG 59.685 50.000 0.00 0.00 38.05 3.21
95 96 0.598065 GAACTGCTTTTCGCCCACAT 59.402 50.000 0.00 0.00 38.05 3.21
96 97 1.781025 CGAACTGCTTTTCGCCCACA 61.781 55.000 7.23 0.00 41.73 4.17
97 98 1.082104 CGAACTGCTTTTCGCCCAC 60.082 57.895 7.23 0.00 41.73 4.61
98 99 3.339731 CGAACTGCTTTTCGCCCA 58.660 55.556 7.23 0.00 41.73 5.36
103 104 0.317854 GTGTGGGCGAACTGCTTTTC 60.318 55.000 0.00 0.00 45.43 2.29
104 105 1.733526 GTGTGGGCGAACTGCTTTT 59.266 52.632 0.00 0.00 45.43 2.27
105 106 2.542907 CGTGTGGGCGAACTGCTTT 61.543 57.895 0.00 0.00 45.43 3.51
106 107 2.972505 CGTGTGGGCGAACTGCTT 60.973 61.111 0.00 0.00 45.43 3.91
117 118 3.792047 CAGGTCATGCGCGTGTGG 61.792 66.667 27.72 12.72 0.00 4.17
118 119 3.792047 CCAGGTCATGCGCGTGTG 61.792 66.667 27.72 18.78 0.00 3.82
131 132 3.889692 ACACAGCCACCACCCAGG 61.890 66.667 0.00 0.00 45.67 4.45
132 133 2.595463 CACACAGCCACCACCCAG 60.595 66.667 0.00 0.00 0.00 4.45
133 134 4.202574 CCACACAGCCACCACCCA 62.203 66.667 0.00 0.00 0.00 4.51
134 135 4.974721 CCCACACAGCCACCACCC 62.975 72.222 0.00 0.00 0.00 4.61
138 139 4.947147 TTCGCCCACACAGCCACC 62.947 66.667 0.00 0.00 0.00 4.61
139 140 2.406452 CTTTTCGCCCACACAGCCAC 62.406 60.000 0.00 0.00 0.00 5.01
140 141 2.124109 TTTTCGCCCACACAGCCA 60.124 55.556 0.00 0.00 0.00 4.75
141 142 2.644992 CTTTTCGCCCACACAGCC 59.355 61.111 0.00 0.00 0.00 4.85
142 143 2.050077 GCTTTTCGCCCACACAGC 60.050 61.111 0.00 0.00 0.00 4.40
143 144 1.283793 CTGCTTTTCGCCCACACAG 59.716 57.895 0.00 0.00 38.05 3.66
144 145 1.034838 AACTGCTTTTCGCCCACACA 61.035 50.000 0.00 0.00 38.05 3.72
145 146 0.317854 GAACTGCTTTTCGCCCACAC 60.318 55.000 0.00 0.00 38.05 3.82
146 147 1.781025 CGAACTGCTTTTCGCCCACA 61.781 55.000 7.23 0.00 41.73 4.17
147 148 1.082104 CGAACTGCTTTTCGCCCAC 60.082 57.895 7.23 0.00 41.73 4.61
148 149 3.339731 CGAACTGCTTTTCGCCCA 58.660 55.556 7.23 0.00 41.73 5.36
153 154 0.317854 GTGTGGGCGAACTGCTTTTC 60.318 55.000 0.00 0.00 45.43 2.29
154 155 1.034838 TGTGTGGGCGAACTGCTTTT 61.035 50.000 0.00 0.00 45.43 2.27
155 156 1.034838 TTGTGTGGGCGAACTGCTTT 61.035 50.000 0.00 0.00 45.43 3.51
156 157 1.453015 TTGTGTGGGCGAACTGCTT 60.453 52.632 0.00 0.00 45.43 3.91
157 158 2.186826 GTTGTGTGGGCGAACTGCT 61.187 57.895 0.00 0.00 45.43 4.24
158 159 2.331451 GTTGTGTGGGCGAACTGC 59.669 61.111 0.00 0.00 45.38 4.40
159 160 2.631428 CGTTGTGTGGGCGAACTG 59.369 61.111 0.00 0.00 0.00 3.16
160 161 3.276846 GCGTTGTGTGGGCGAACT 61.277 61.111 0.00 0.00 0.00 3.01
161 162 3.521308 CTGCGTTGTGTGGGCGAAC 62.521 63.158 0.00 0.00 0.00 3.95
162 163 3.276091 CTGCGTTGTGTGGGCGAA 61.276 61.111 0.00 0.00 0.00 4.70
165 166 4.332637 CAGCTGCGTTGTGTGGGC 62.333 66.667 0.00 0.00 0.00 5.36
166 167 3.663176 CCAGCTGCGTTGTGTGGG 61.663 66.667 8.66 0.00 0.00 4.61
167 168 4.332637 GCCAGCTGCGTTGTGTGG 62.333 66.667 8.66 0.00 0.00 4.17
168 169 2.610700 TTTGCCAGCTGCGTTGTGTG 62.611 55.000 8.66 0.00 45.60 3.82
169 170 2.413963 TTTGCCAGCTGCGTTGTGT 61.414 52.632 8.66 0.00 45.60 3.72
170 171 1.945662 GTTTGCCAGCTGCGTTGTG 60.946 57.895 8.66 0.00 45.60 3.33
171 172 2.340453 CTGTTTGCCAGCTGCGTTGT 62.340 55.000 8.66 0.00 45.60 3.32
172 173 1.659335 CTGTTTGCCAGCTGCGTTG 60.659 57.895 8.66 0.00 45.60 4.10
173 174 2.723746 CTGTTTGCCAGCTGCGTT 59.276 55.556 8.66 0.00 45.60 4.84
180 181 2.332514 CACCACGCTGTTTGCCAG 59.667 61.111 0.00 0.00 44.53 4.85
181 182 3.898509 GCACCACGCTGTTTGCCA 61.899 61.111 0.00 0.00 38.78 4.92
182 183 4.980903 CGCACCACGCTGTTTGCC 62.981 66.667 0.00 0.00 39.08 4.52
183 184 4.980903 CCGCACCACGCTGTTTGC 62.981 66.667 0.00 0.00 41.76 3.68
184 185 4.326766 CCCGCACCACGCTGTTTG 62.327 66.667 0.00 0.00 41.76 2.93
198 199 3.625082 GATTTTGCCCACACGCCCG 62.625 63.158 0.00 0.00 0.00 6.13
199 200 2.212900 GAGATTTTGCCCACACGCCC 62.213 60.000 0.00 0.00 0.00 6.13
200 201 1.212751 GAGATTTTGCCCACACGCC 59.787 57.895 0.00 0.00 0.00 5.68
201 202 1.212751 GGAGATTTTGCCCACACGC 59.787 57.895 0.00 0.00 0.00 5.34
202 203 0.958091 TTGGAGATTTTGCCCACACG 59.042 50.000 0.00 0.00 0.00 4.49
203 204 1.335872 CGTTGGAGATTTTGCCCACAC 60.336 52.381 0.00 0.00 0.00 3.82
204 205 0.958091 CGTTGGAGATTTTGCCCACA 59.042 50.000 0.00 0.00 0.00 4.17
205 206 0.388520 GCGTTGGAGATTTTGCCCAC 60.389 55.000 0.00 0.00 0.00 4.61
206 207 1.531739 GGCGTTGGAGATTTTGCCCA 61.532 55.000 0.00 0.00 36.51 5.36
207 208 1.215382 GGCGTTGGAGATTTTGCCC 59.785 57.895 0.00 0.00 36.51 5.36
208 209 1.215382 GGGCGTTGGAGATTTTGCC 59.785 57.895 0.00 0.00 41.72 4.52
209 210 0.388520 GTGGGCGTTGGAGATTTTGC 60.389 55.000 0.00 0.00 0.00 3.68
210 211 0.958091 TGTGGGCGTTGGAGATTTTG 59.042 50.000 0.00 0.00 0.00 2.44
211 212 0.958822 GTGTGGGCGTTGGAGATTTT 59.041 50.000 0.00 0.00 0.00 1.82
212 213 0.179004 TGTGTGGGCGTTGGAGATTT 60.179 50.000 0.00 0.00 0.00 2.17
213 214 0.889186 GTGTGTGGGCGTTGGAGATT 60.889 55.000 0.00 0.00 0.00 2.40
214 215 1.302511 GTGTGTGGGCGTTGGAGAT 60.303 57.895 0.00 0.00 0.00 2.75
215 216 2.110213 GTGTGTGGGCGTTGGAGA 59.890 61.111 0.00 0.00 0.00 3.71
216 217 2.978010 GGTGTGTGGGCGTTGGAG 60.978 66.667 0.00 0.00 0.00 3.86
217 218 3.765894 CTGGTGTGTGGGCGTTGGA 62.766 63.158 0.00 0.00 0.00 3.53
218 219 3.286751 CTGGTGTGTGGGCGTTGG 61.287 66.667 0.00 0.00 0.00 3.77
219 220 3.964875 GCTGGTGTGTGGGCGTTG 61.965 66.667 0.00 0.00 0.00 4.10
227 228 3.839046 TAGGACGGGGCTGGTGTGT 62.839 63.158 0.00 0.00 0.00 3.72
228 229 3.000819 TAGGACGGGGCTGGTGTG 61.001 66.667 0.00 0.00 0.00 3.82
229 230 3.001406 GTAGGACGGGGCTGGTGT 61.001 66.667 0.00 0.00 0.00 4.16
230 231 4.143333 CGTAGGACGGGGCTGGTG 62.143 72.222 0.00 0.00 38.08 4.17
239 240 2.702751 TTGGTGTGCCACGTAGGACG 62.703 60.000 0.82 0.00 46.01 4.79
240 241 0.533308 TTTGGTGTGCCACGTAGGAC 60.533 55.000 0.00 0.00 46.01 3.85
241 242 0.398696 ATTTGGTGTGCCACGTAGGA 59.601 50.000 8.04 0.00 46.01 2.94
242 243 0.802494 GATTTGGTGTGCCACGTAGG 59.198 55.000 0.00 0.00 46.01 3.18
243 244 0.802494 GGATTTGGTGTGCCACGTAG 59.198 55.000 0.00 0.00 46.01 3.51
244 245 0.108774 TGGATTTGGTGTGCCACGTA 59.891 50.000 0.00 0.00 46.01 3.57
245 246 1.152860 TGGATTTGGTGTGCCACGT 60.153 52.632 0.00 0.00 46.01 4.49
246 247 1.285641 GTGGATTTGGTGTGCCACG 59.714 57.895 0.00 0.00 46.01 4.94
247 248 0.827507 AGGTGGATTTGGTGTGCCAC 60.828 55.000 0.00 0.00 46.01 5.01
248 249 0.105760 AAGGTGGATTTGGTGTGCCA 60.106 50.000 0.00 0.00 44.38 4.92
249 250 1.047801 AAAGGTGGATTTGGTGTGCC 58.952 50.000 0.00 0.00 0.00 5.01
250 251 2.754472 GAAAAGGTGGATTTGGTGTGC 58.246 47.619 0.00 0.00 0.00 4.57
251 252 2.360801 ACGAAAAGGTGGATTTGGTGTG 59.639 45.455 0.00 0.00 29.26 3.82
252 253 2.360801 CACGAAAAGGTGGATTTGGTGT 59.639 45.455 0.00 0.00 39.87 4.16
253 254 2.360801 ACACGAAAAGGTGGATTTGGTG 59.639 45.455 11.05 11.05 45.89 4.17
254 255 2.621526 GACACGAAAAGGTGGATTTGGT 59.378 45.455 0.00 0.00 42.23 3.67
255 256 2.621055 TGACACGAAAAGGTGGATTTGG 59.379 45.455 0.00 0.00 42.23 3.28
256 257 3.980646 TGACACGAAAAGGTGGATTTG 57.019 42.857 0.00 0.00 42.23 2.32
257 258 4.204012 TCTTGACACGAAAAGGTGGATTT 58.796 39.130 0.00 0.00 42.23 2.17
258 259 3.815809 TCTTGACACGAAAAGGTGGATT 58.184 40.909 0.00 0.00 42.23 3.01
259 260 3.485463 TCTTGACACGAAAAGGTGGAT 57.515 42.857 0.00 0.00 42.23 3.41
260 261 2.992124 TCTTGACACGAAAAGGTGGA 57.008 45.000 0.00 0.00 42.23 4.02
261 262 3.363970 CGAATCTTGACACGAAAAGGTGG 60.364 47.826 0.00 0.00 42.23 4.61
262 263 3.247648 ACGAATCTTGACACGAAAAGGTG 59.752 43.478 0.00 0.00 43.54 4.00
263 264 3.247648 CACGAATCTTGACACGAAAAGGT 59.752 43.478 0.00 0.00 0.00 3.50
264 265 3.799035 CACGAATCTTGACACGAAAAGG 58.201 45.455 0.00 0.00 0.00 3.11
265 266 3.218398 GCACGAATCTTGACACGAAAAG 58.782 45.455 0.00 0.00 0.00 2.27
266 267 2.609916 TGCACGAATCTTGACACGAAAA 59.390 40.909 0.00 0.00 0.00 2.29
267 268 2.205911 TGCACGAATCTTGACACGAAA 58.794 42.857 0.00 0.00 0.00 3.46
268 269 1.859383 TGCACGAATCTTGACACGAA 58.141 45.000 0.00 0.00 0.00 3.85
269 270 1.859383 TTGCACGAATCTTGACACGA 58.141 45.000 0.00 0.00 0.00 4.35
270 271 2.661504 TTTGCACGAATCTTGACACG 57.338 45.000 0.00 0.00 0.00 4.49
271 272 3.968724 GTCTTTTGCACGAATCTTGACAC 59.031 43.478 0.00 0.00 0.00 3.67
272 273 3.625313 TGTCTTTTGCACGAATCTTGACA 59.375 39.130 0.00 0.00 0.00 3.58
273 274 4.209452 TGTCTTTTGCACGAATCTTGAC 57.791 40.909 0.00 0.00 0.00 3.18
274 275 3.876914 ACTGTCTTTTGCACGAATCTTGA 59.123 39.130 0.00 0.00 0.00 3.02
275 276 3.970610 CACTGTCTTTTGCACGAATCTTG 59.029 43.478 0.00 0.00 0.00 3.02
276 277 3.876914 TCACTGTCTTTTGCACGAATCTT 59.123 39.130 0.00 0.00 0.00 2.40
277 278 3.466836 TCACTGTCTTTTGCACGAATCT 58.533 40.909 0.00 0.00 0.00 2.40
278 279 3.878086 TCACTGTCTTTTGCACGAATC 57.122 42.857 0.00 0.00 0.00 2.52
279 280 3.546020 CGTTCACTGTCTTTTGCACGAAT 60.546 43.478 0.00 0.00 0.00 3.34
280 281 2.222931 CGTTCACTGTCTTTTGCACGAA 60.223 45.455 0.00 0.00 0.00 3.85
281 282 1.326245 CGTTCACTGTCTTTTGCACGA 59.674 47.619 0.00 0.00 0.00 4.35
282 283 1.594518 CCGTTCACTGTCTTTTGCACG 60.595 52.381 0.00 0.00 0.00 5.34
283 284 1.859998 GCCGTTCACTGTCTTTTGCAC 60.860 52.381 0.00 0.00 0.00 4.57
284 285 0.380378 GCCGTTCACTGTCTTTTGCA 59.620 50.000 0.00 0.00 0.00 4.08
285 286 0.657368 CGCCGTTCACTGTCTTTTGC 60.657 55.000 0.00 0.00 0.00 3.68
286 287 0.934496 TCGCCGTTCACTGTCTTTTG 59.066 50.000 0.00 0.00 0.00 2.44
287 288 1.798813 GATCGCCGTTCACTGTCTTTT 59.201 47.619 0.00 0.00 0.00 2.27
288 289 1.429463 GATCGCCGTTCACTGTCTTT 58.571 50.000 0.00 0.00 0.00 2.52
289 290 0.389948 GGATCGCCGTTCACTGTCTT 60.390 55.000 0.00 0.00 0.00 3.01
290 291 1.215647 GGATCGCCGTTCACTGTCT 59.784 57.895 0.00 0.00 0.00 3.41
291 292 3.782042 GGATCGCCGTTCACTGTC 58.218 61.111 0.00 0.00 0.00 3.51
308 309 4.657824 AACTCGCCCACACGTCCG 62.658 66.667 0.00 0.00 0.00 4.79
309 310 3.041940 CAACTCGCCCACACGTCC 61.042 66.667 0.00 0.00 0.00 4.79
310 311 3.041940 CCAACTCGCCCACACGTC 61.042 66.667 0.00 0.00 0.00 4.34
311 312 4.619227 CCCAACTCGCCCACACGT 62.619 66.667 0.00 0.00 0.00 4.49
312 313 2.718747 TTACCCAACTCGCCCACACG 62.719 60.000 0.00 0.00 0.00 4.49
313 314 1.071814 TTACCCAACTCGCCCACAC 59.928 57.895 0.00 0.00 0.00 3.82
314 315 1.071814 GTTACCCAACTCGCCCACA 59.928 57.895 0.00 0.00 0.00 4.17
315 316 2.030958 CGTTACCCAACTCGCCCAC 61.031 63.158 0.00 0.00 32.09 4.61
316 317 2.344500 CGTTACCCAACTCGCCCA 59.656 61.111 0.00 0.00 32.09 5.36
317 318 3.122971 GCGTTACCCAACTCGCCC 61.123 66.667 0.00 0.00 42.33 6.13
327 328 2.280321 ACACGTGTGGGCGTTACC 60.280 61.111 22.71 0.00 43.83 2.85
328 329 2.932905 CACACGTGTGGGCGTTAC 59.067 61.111 35.65 0.00 43.83 2.50
340 341 0.658897 AAAACACTAACGCCCACACG 59.341 50.000 0.00 0.00 39.50 4.49
341 342 1.333435 CGAAAACACTAACGCCCACAC 60.333 52.381 0.00 0.00 0.00 3.82
342 343 0.938713 CGAAAACACTAACGCCCACA 59.061 50.000 0.00 0.00 0.00 4.17
343 344 1.219646 TCGAAAACACTAACGCCCAC 58.780 50.000 0.00 0.00 0.00 4.61
344 345 1.950828 TTCGAAAACACTAACGCCCA 58.049 45.000 0.00 0.00 0.00 5.36
345 346 2.545106 TCTTTCGAAAACACTAACGCCC 59.455 45.455 12.41 0.00 0.00 6.13
346 347 3.865224 TCTTTCGAAAACACTAACGCC 57.135 42.857 12.41 0.00 0.00 5.68
347 348 6.466730 TCTTTTTCTTTCGAAAACACTAACGC 59.533 34.615 12.41 0.00 45.87 4.84
348 349 7.942145 TCTTTTTCTTTCGAAAACACTAACG 57.058 32.000 12.41 0.00 45.87 3.18
349 350 8.259872 GCATCTTTTTCTTTCGAAAACACTAAC 58.740 33.333 12.41 0.00 45.87 2.34
350 351 7.434013 GGCATCTTTTTCTTTCGAAAACACTAA 59.566 33.333 12.41 2.63 45.87 2.24
351 352 6.915843 GGCATCTTTTTCTTTCGAAAACACTA 59.084 34.615 12.41 0.00 45.87 2.74
352 353 5.748630 GGCATCTTTTTCTTTCGAAAACACT 59.251 36.000 12.41 0.00 45.87 3.55
353 354 5.331532 CGGCATCTTTTTCTTTCGAAAACAC 60.332 40.000 12.41 0.00 45.87 3.32
354 355 4.737765 CGGCATCTTTTTCTTTCGAAAACA 59.262 37.500 12.41 0.00 45.87 2.83
355 356 4.973663 TCGGCATCTTTTTCTTTCGAAAAC 59.026 37.500 12.41 0.00 45.87 2.43
356 357 5.176407 TCGGCATCTTTTTCTTTCGAAAA 57.824 34.783 12.41 0.54 44.89 2.29
357 358 4.783242 CTCGGCATCTTTTTCTTTCGAAA 58.217 39.130 10.71 10.71 37.36 3.46
358 359 3.364964 GCTCGGCATCTTTTTCTTTCGAA 60.365 43.478 0.00 0.00 0.00 3.71
359 360 2.159627 GCTCGGCATCTTTTTCTTTCGA 59.840 45.455 0.00 0.00 0.00 3.71
360 361 2.509870 GCTCGGCATCTTTTTCTTTCG 58.490 47.619 0.00 0.00 0.00 3.46
361 362 2.228822 TGGCTCGGCATCTTTTTCTTTC 59.771 45.455 0.00 0.00 0.00 2.62
362 363 2.229784 CTGGCTCGGCATCTTTTTCTTT 59.770 45.455 0.00 0.00 0.00 2.52
363 364 1.815003 CTGGCTCGGCATCTTTTTCTT 59.185 47.619 0.00 0.00 0.00 2.52
364 365 1.003580 TCTGGCTCGGCATCTTTTTCT 59.996 47.619 0.00 0.00 0.00 2.52
365 366 1.399791 CTCTGGCTCGGCATCTTTTTC 59.600 52.381 0.00 0.00 0.00 2.29
366 367 1.457346 CTCTGGCTCGGCATCTTTTT 58.543 50.000 0.00 0.00 0.00 1.94
367 368 1.028868 GCTCTGGCTCGGCATCTTTT 61.029 55.000 0.00 0.00 35.22 2.27
368 369 1.451028 GCTCTGGCTCGGCATCTTT 60.451 57.895 0.00 0.00 35.22 2.52
369 370 2.188994 GCTCTGGCTCGGCATCTT 59.811 61.111 0.00 0.00 35.22 2.40
370 371 4.218578 CGCTCTGGCTCGGCATCT 62.219 66.667 0.00 0.00 36.09 2.90
371 372 4.521062 ACGCTCTGGCTCGGCATC 62.521 66.667 0.00 0.00 36.09 3.91
372 373 4.827087 CACGCTCTGGCTCGGCAT 62.827 66.667 0.00 0.00 36.09 4.40
392 393 3.061848 AATTGGCTTGCCCGGTCG 61.062 61.111 9.35 0.00 35.87 4.79
393 394 2.275380 ACAATTGGCTTGCCCGGTC 61.275 57.895 10.83 0.00 38.50 4.79
394 395 2.203625 ACAATTGGCTTGCCCGGT 60.204 55.556 10.83 0.00 38.50 5.28
395 396 2.262292 CACAATTGGCTTGCCCGG 59.738 61.111 10.83 0.00 38.50 5.73
396 397 2.432972 GCACAATTGGCTTGCCCG 60.433 61.111 10.83 0.00 38.50 6.13
397 398 1.375013 CAGCACAATTGGCTTGCCC 60.375 57.895 15.98 0.00 40.23 5.36
398 399 2.030958 GCAGCACAATTGGCTTGCC 61.031 57.895 15.98 4.43 40.23 4.52
399 400 1.289109 CTGCAGCACAATTGGCTTGC 61.289 55.000 21.70 21.70 40.23 4.01
400 401 1.289109 GCTGCAGCACAATTGGCTTG 61.289 55.000 33.36 12.98 40.23 4.01
401 402 1.005394 GCTGCAGCACAATTGGCTT 60.005 52.632 33.36 3.07 40.23 4.35
402 403 2.654877 GCTGCAGCACAATTGGCT 59.345 55.556 33.36 12.48 43.77 4.75
403 404 2.433664 GGCTGCAGCACAATTGGC 60.434 61.111 37.63 15.84 44.36 4.52
404 405 2.263540 GGGCTGCAGCACAATTGG 59.736 61.111 37.63 0.00 45.57 3.16
405 406 2.126228 CGGGCTGCAGCACAATTG 60.126 61.111 38.10 19.91 46.93 2.32
406 407 4.060038 GCGGGCTGCAGCACAATT 62.060 61.111 38.10 0.00 46.93 2.32
425 426 1.169661 TAAAACACCCACGCAGGCTG 61.170 55.000 10.94 10.94 35.39 4.85
426 427 1.149627 TAAAACACCCACGCAGGCT 59.850 52.632 0.00 0.00 35.39 4.58
427 428 1.284715 GTAAAACACCCACGCAGGC 59.715 57.895 0.00 0.00 35.39 4.85
428 429 1.572447 CGTAAAACACCCACGCAGG 59.428 57.895 0.00 0.00 37.03 4.85
432 433 1.572447 CTGGCGTAAAACACCCACG 59.428 57.895 0.00 0.00 38.66 4.94
433 434 0.820482 ACCTGGCGTAAAACACCCAC 60.820 55.000 0.00 0.00 0.00 4.61
434 435 0.106619 AACCTGGCGTAAAACACCCA 60.107 50.000 0.00 0.00 0.00 4.51
435 436 1.034356 AAACCTGGCGTAAAACACCC 58.966 50.000 0.00 0.00 0.00 4.61
436 437 1.269361 CCAAACCTGGCGTAAAACACC 60.269 52.381 0.00 0.00 35.39 4.16
437 438 1.269361 CCCAAACCTGGCGTAAAACAC 60.269 52.381 0.00 0.00 41.99 3.32
438 439 1.033574 CCCAAACCTGGCGTAAAACA 58.966 50.000 0.00 0.00 41.99 2.83
439 440 0.319211 GCCCAAACCTGGCGTAAAAC 60.319 55.000 0.00 0.00 41.99 2.43
440 441 2.042800 GCCCAAACCTGGCGTAAAA 58.957 52.632 0.00 0.00 41.99 1.52
441 442 3.766432 GCCCAAACCTGGCGTAAA 58.234 55.556 0.00 0.00 41.99 2.01
451 452 1.084289 GACCATCTACGTGCCCAAAC 58.916 55.000 0.00 0.00 0.00 2.93
488 489 4.511826 GGCAACCGAGAATAGTTATCAAGG 59.488 45.833 0.00 0.00 0.00 3.61
520 526 7.751047 TGATTTCGACTTTGCTGTATACTAC 57.249 36.000 4.17 0.00 0.00 2.73
521 527 8.033038 AGTTGATTTCGACTTTGCTGTATACTA 58.967 33.333 4.17 0.00 37.29 1.82
522 528 6.874134 AGTTGATTTCGACTTTGCTGTATACT 59.126 34.615 4.17 0.00 37.29 2.12
526 532 4.213270 CCAGTTGATTTCGACTTTGCTGTA 59.787 41.667 0.00 0.00 38.50 2.74
529 535 2.030805 GCCAGTTGATTTCGACTTTGCT 60.031 45.455 10.13 0.00 38.50 3.91
532 538 1.535462 CGGCCAGTTGATTTCGACTTT 59.465 47.619 2.24 0.00 38.50 2.66
591 612 2.819595 GGCGAAGATTGCAGCGGA 60.820 61.111 0.00 0.00 0.00 5.54
592 613 4.228097 CGGCGAAGATTGCAGCGG 62.228 66.667 0.00 0.00 0.00 5.52
593 614 3.425938 GACGGCGAAGATTGCAGCG 62.426 63.158 16.62 0.00 0.00 5.18
594 615 2.401195 GACGGCGAAGATTGCAGC 59.599 61.111 16.62 0.00 0.00 5.25
595 616 2.697425 CGACGGCGAAGATTGCAG 59.303 61.111 16.62 0.00 40.82 4.41
596 617 3.487202 GCGACGGCGAAGATTGCA 61.487 61.111 18.90 0.00 40.82 4.08
597 618 4.223964 GGCGACGGCGAAGATTGC 62.224 66.667 18.90 6.38 41.24 3.56
598 619 0.874175 TATGGCGACGGCGAAGATTG 60.874 55.000 18.90 0.00 41.24 2.67
599 620 0.033504 ATATGGCGACGGCGAAGATT 59.966 50.000 18.90 0.00 41.24 2.40
600 621 0.388649 GATATGGCGACGGCGAAGAT 60.389 55.000 18.90 3.61 41.24 2.40
601 622 1.007734 GATATGGCGACGGCGAAGA 60.008 57.895 18.90 0.00 41.24 2.87
602 623 0.667487 ATGATATGGCGACGGCGAAG 60.667 55.000 18.90 8.08 41.24 3.79
603 624 0.666274 GATGATATGGCGACGGCGAA 60.666 55.000 18.90 0.06 41.24 4.70
604 625 1.080772 GATGATATGGCGACGGCGA 60.081 57.895 18.90 7.62 41.24 5.54
605 626 1.080501 AGATGATATGGCGACGGCG 60.081 57.895 17.16 6.12 41.24 6.46
606 627 0.319900 ACAGATGATATGGCGACGGC 60.320 55.000 15.43 15.43 38.90 5.68
607 628 2.154854 AACAGATGATATGGCGACGG 57.845 50.000 0.00 0.00 0.00 4.79
617 638 1.740380 CGGCGAGTGGAAACAGATGAT 60.740 52.381 0.00 0.00 44.46 2.45
620 641 0.389948 GACGGCGAGTGGAAACAGAT 60.390 55.000 16.62 0.00 44.46 2.90
623 644 2.029964 GGACGGCGAGTGGAAACA 59.970 61.111 16.62 0.00 38.70 2.83
629 650 4.778415 CCTGACGGACGGCGAGTG 62.778 72.222 16.62 4.49 0.00 3.51
633 654 1.009222 GTATACCTGACGGACGGCG 60.009 63.158 4.80 4.80 0.00 6.46
635 656 4.696877 TGTATATGTATACCTGACGGACGG 59.303 45.833 0.00 0.00 38.17 4.79
681 702 4.156455 ACAATACAAGATGGCGAGGATT 57.844 40.909 0.00 0.00 0.00 3.01
685 706 3.242543 GCTGAACAATACAAGATGGCGAG 60.243 47.826 0.00 0.00 0.00 5.03
687 708 2.223340 GGCTGAACAATACAAGATGGCG 60.223 50.000 0.00 0.00 0.00 5.69
689 743 3.009723 ACGGCTGAACAATACAAGATGG 58.990 45.455 0.00 0.00 0.00 3.51
691 745 6.817184 AGTATACGGCTGAACAATACAAGAT 58.183 36.000 0.00 0.00 0.00 2.40
695 749 6.167685 ACAAAGTATACGGCTGAACAATACA 58.832 36.000 0.00 0.00 0.00 2.29
696 750 6.657836 ACAAAGTATACGGCTGAACAATAC 57.342 37.500 0.00 2.04 0.00 1.89
697 751 7.439955 CCATACAAAGTATACGGCTGAACAATA 59.560 37.037 0.00 0.00 0.00 1.90
700 754 5.113383 CCATACAAAGTATACGGCTGAACA 58.887 41.667 0.00 0.00 0.00 3.18
702 756 5.347620 ACCATACAAAGTATACGGCTGAA 57.652 39.130 0.00 0.00 0.00 3.02
706 760 4.034742 CACCAACCATACAAAGTATACGGC 59.965 45.833 0.00 0.00 0.00 5.68
708 762 6.730960 AACACCAACCATACAAAGTATACG 57.269 37.500 0.00 0.00 0.00 3.06
722 776 7.364970 CCCGCTTTATATATAAAACACCAACC 58.635 38.462 16.69 1.38 32.39 3.77
723 777 7.364970 CCCCGCTTTATATATAAAACACCAAC 58.635 38.462 16.69 3.20 32.39 3.77
728 782 5.549347 TCGCCCCGCTTTATATATAAAACA 58.451 37.500 16.69 0.00 32.39 2.83
729 783 6.484818 TTCGCCCCGCTTTATATATAAAAC 57.515 37.500 16.69 12.33 32.39 2.43
730 784 7.361894 GTTTTCGCCCCGCTTTATATATAAAA 58.638 34.615 16.69 4.08 32.39 1.52
731 785 6.072563 GGTTTTCGCCCCGCTTTATATATAAA 60.073 38.462 15.47 15.47 0.00 1.40
732 786 5.412286 GGTTTTCGCCCCGCTTTATATATAA 59.588 40.000 0.81 0.81 0.00 0.98
733 787 4.937015 GGTTTTCGCCCCGCTTTATATATA 59.063 41.667 0.00 0.00 0.00 0.86
734 788 3.754850 GGTTTTCGCCCCGCTTTATATAT 59.245 43.478 0.00 0.00 0.00 0.86
735 789 3.140623 GGTTTTCGCCCCGCTTTATATA 58.859 45.455 0.00 0.00 0.00 0.86
736 790 1.951602 GGTTTTCGCCCCGCTTTATAT 59.048 47.619 0.00 0.00 0.00 0.86
738 792 0.323087 AGGTTTTCGCCCCGCTTTAT 60.323 50.000 0.00 0.00 0.00 1.40
739 793 1.073548 AGGTTTTCGCCCCGCTTTA 59.926 52.632 0.00 0.00 0.00 1.85
740 794 2.203437 AGGTTTTCGCCCCGCTTT 60.203 55.556 0.00 0.00 0.00 3.51
741 795 2.983592 CAGGTTTTCGCCCCGCTT 60.984 61.111 0.00 0.00 0.00 4.68
742 796 3.785122 AACAGGTTTTCGCCCCGCT 62.785 57.895 0.00 0.00 0.00 5.52
744 798 1.284715 GAAACAGGTTTTCGCCCCG 59.715 57.895 0.00 0.00 32.11 5.73
746 800 4.935630 CGAAACAGGTTTTCGCCC 57.064 55.556 6.24 0.00 43.52 6.13
747 801 2.411630 ACCTCGAAACAGGTTTTCGCC 61.412 52.381 13.03 0.00 45.24 5.54
748 802 0.942252 ACCTCGAAACAGGTTTTCGC 59.058 50.000 13.03 0.00 45.24 4.70
755 809 2.968675 ACGGAATAACCTCGAAACAGG 58.031 47.619 0.00 0.00 39.80 4.00
757 811 5.327616 TGATACGGAATAACCTCGAAACA 57.672 39.130 0.00 0.00 36.31 2.83
758 812 6.257193 ACATTGATACGGAATAACCTCGAAAC 59.743 38.462 0.00 0.00 36.31 2.78
760 814 5.909477 ACATTGATACGGAATAACCTCGAA 58.091 37.500 0.00 0.00 36.31 3.71
761 815 5.524971 ACATTGATACGGAATAACCTCGA 57.475 39.130 0.00 0.00 36.31 4.04
763 817 6.920569 ACAACATTGATACGGAATAACCTC 57.079 37.500 0.00 0.00 36.31 3.85
764 818 6.882140 TCAACAACATTGATACGGAATAACCT 59.118 34.615 0.00 0.00 36.31 3.50
766 820 8.234546 ACTTCAACAACATTGATACGGAATAAC 58.765 33.333 0.00 0.00 0.00 1.89
768 822 7.604545 TGACTTCAACAACATTGATACGGAATA 59.395 33.333 0.00 0.00 0.00 1.75
769 823 6.429692 TGACTTCAACAACATTGATACGGAAT 59.570 34.615 0.00 0.00 0.00 3.01
770 824 5.760743 TGACTTCAACAACATTGATACGGAA 59.239 36.000 0.00 0.00 0.00 4.30
771 825 5.178623 GTGACTTCAACAACATTGATACGGA 59.821 40.000 0.00 0.00 0.00 4.69
772 826 5.179368 AGTGACTTCAACAACATTGATACGG 59.821 40.000 0.00 0.00 0.00 4.02
773 827 6.073369 CAGTGACTTCAACAACATTGATACG 58.927 40.000 0.00 0.00 0.00 3.06
774 828 6.373779 CCAGTGACTTCAACAACATTGATAC 58.626 40.000 0.00 0.00 0.00 2.24
776 830 4.279169 CCCAGTGACTTCAACAACATTGAT 59.721 41.667 0.00 0.00 0.00 2.57
777 831 3.631686 CCCAGTGACTTCAACAACATTGA 59.368 43.478 0.00 0.00 0.00 2.57
786 1391 5.048083 GCATACAAAATCCCAGTGACTTCAA 60.048 40.000 0.00 0.00 0.00 2.69
810 1435 7.325660 AGGCACATAGTTATGTCAATGAAAG 57.674 36.000 1.87 0.00 44.57 2.62
814 1439 9.271828 TGTAATAGGCACATAGTTATGTCAATG 57.728 33.333 1.87 0.00 44.57 2.82
866 1494 8.761497 CGAATAACAGAAAAGTAACAGAGTGAA 58.239 33.333 0.00 0.00 0.00 3.18
907 1537 7.440856 CACCAAACAAAGGCATGTATTAAAAGT 59.559 33.333 0.00 0.00 32.02 2.66
908 1538 7.655328 TCACCAAACAAAGGCATGTATTAAAAG 59.345 33.333 0.00 0.00 32.02 2.27
909 1539 7.500992 TCACCAAACAAAGGCATGTATTAAAA 58.499 30.769 0.00 0.00 32.02 1.52
910 1540 7.055667 TCACCAAACAAAGGCATGTATTAAA 57.944 32.000 0.00 0.00 32.02 1.52
911 1541 6.656632 TCACCAAACAAAGGCATGTATTAA 57.343 33.333 0.00 0.00 32.02 1.40
912 1542 6.849085 ATCACCAAACAAAGGCATGTATTA 57.151 33.333 0.00 0.00 32.02 0.98
913 1543 5.743636 ATCACCAAACAAAGGCATGTATT 57.256 34.783 0.00 0.00 32.02 1.89
914 1544 5.743636 AATCACCAAACAAAGGCATGTAT 57.256 34.783 0.00 0.00 32.02 2.29
1044 1689 4.218635 CCTAGCCGAGCAATGATAGAGTAA 59.781 45.833 0.00 0.00 0.00 2.24
1071 1716 3.479505 ACAAGATCAGAGAACGAGACG 57.520 47.619 0.00 0.00 0.00 4.18
1183 1828 1.959226 GACGGCGAGGAAAGCACAA 60.959 57.895 16.62 0.00 36.08 3.33
1197 1842 1.078426 GTTGGTCATGGGAGGACGG 60.078 63.158 0.00 0.00 36.12 4.79
1242 1887 5.823045 GTCTTGGTTTGCTATATTAGTGGCT 59.177 40.000 0.00 0.00 0.00 4.75
1293 1938 9.414295 GTATTGTTTTCACCAAAAATACTACCC 57.586 33.333 0.00 0.00 39.01 3.69
1442 2329 4.098960 TGATGTCCTTAATGACCGGTAGAC 59.901 45.833 7.34 6.83 34.25 2.59
1443 2330 4.283337 TGATGTCCTTAATGACCGGTAGA 58.717 43.478 7.34 0.00 34.25 2.59
1525 2412 4.209452 ACAAATTGCGCGATTCGATATT 57.791 36.364 22.84 3.73 41.67 1.28
1532 2419 1.194322 GCCAAAACAAATTGCGCGATT 59.806 42.857 17.36 17.36 0.00 3.34
1849 4031 1.470098 CAGCCATAGTGCAGGTTCAAC 59.530 52.381 0.00 0.00 0.00 3.18
2013 4196 3.437642 TGGCTTTCCCAACTCAAGG 57.562 52.632 0.00 0.00 41.82 3.61
2125 4308 1.331756 CCAACAGAACGATAGCATGCC 59.668 52.381 15.66 0.00 42.67 4.40
2133 4316 2.224523 ACACCATCACCAACAGAACGAT 60.225 45.455 0.00 0.00 0.00 3.73
2206 4397 9.958234 GGCAAAATTAGAGATTCTTAGAAATCC 57.042 33.333 0.00 0.00 36.49 3.01
2259 4452 8.684973 CTCAAAATAAAAATCTCTTGAGCCAG 57.315 34.615 0.00 0.00 35.01 4.85
2278 4471 7.509141 TGAGTTCAAGTTATGATGCTCAAAA 57.491 32.000 9.34 0.00 42.39 2.44
2395 4590 3.660501 AGTCACGAGCTTATGTGAACA 57.339 42.857 16.02 0.00 45.84 3.18
2462 4763 8.203485 ACACAAAAGGTTTCAATGTACATCATT 58.797 29.630 9.23 0.00 46.32 2.57
2491 4792 6.870769 ACATTGGGATCTAGCATTGAAAAAG 58.129 36.000 0.00 0.00 0.00 2.27
2495 4796 7.289310 TGATAACATTGGGATCTAGCATTGAA 58.711 34.615 0.00 0.00 0.00 2.69
2538 4839 1.213926 AGGCCTGGGATGAATCAAGTC 59.786 52.381 3.11 0.00 0.00 3.01
2607 4965 5.264060 CGATAAACGGTACCATTGCATAG 57.736 43.478 13.54 0.00 38.46 2.23
2749 5108 0.674581 TGAACTGGCCATTGCGAGAG 60.675 55.000 5.51 0.00 45.29 3.20
2754 5113 0.896923 TGGATTGAACTGGCCATTGC 59.103 50.000 5.51 0.00 0.00 3.56
2798 5157 3.736252 CCACTAGTGTTCACGAGACAAAG 59.264 47.826 21.18 0.00 0.00 2.77
2800 5159 2.545113 GCCACTAGTGTTCACGAGACAA 60.545 50.000 21.18 0.00 0.00 3.18
2801 5160 1.000607 GCCACTAGTGTTCACGAGACA 60.001 52.381 21.18 0.00 0.00 3.41
2908 5273 6.263392 TCAGGAGACTATGAGCATGTAAGTAC 59.737 42.308 0.00 0.00 40.21 2.73
2919 5284 6.511416 CCATTAGTGTTCAGGAGACTATGAG 58.489 44.000 0.00 0.00 40.21 2.90
3090 5510 4.487714 TTTTGGAGAGGCAGTAGTATGG 57.512 45.455 0.00 0.00 0.00 2.74
3092 5512 5.499004 TGTTTTTGGAGAGGCAGTAGTAT 57.501 39.130 0.00 0.00 0.00 2.12
3094 5514 3.857157 TGTTTTTGGAGAGGCAGTAGT 57.143 42.857 0.00 0.00 0.00 2.73
3095 5515 4.520492 ACAATGTTTTTGGAGAGGCAGTAG 59.480 41.667 0.00 0.00 0.00 2.57
3121 5541 1.683943 CATAGTCATGCACCAAGGGG 58.316 55.000 0.00 0.00 41.29 4.79


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.