Multiple sequence alignment - TraesCS4A01G454900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G454900 chr4A 100.000 4608 0 0 1 4608 718854183 718858790 0.000000e+00 8510.0
1 TraesCS4A01G454900 chr4A 79.353 1947 333 38 2699 4608 714339212 714341126 0.000000e+00 1304.0
2 TraesCS4A01G454900 chr4A 97.059 34 1 0 3953 3986 718852330 718852297 1.790000e-04 58.4
3 TraesCS4A01G454900 chr7D 95.840 3750 120 12 862 4608 16220011 16223727 0.000000e+00 6028.0
4 TraesCS4A01G454900 chr7D 87.857 280 31 1 5 281 26458671 26458950 4.450000e-85 326.0
5 TraesCS4A01G454900 chr7D 75.758 528 102 21 2722 3231 20262467 20261948 4.610000e-60 243.0
6 TraesCS4A01G454900 chr7D 90.476 168 16 0 2347 2514 26459441 26459608 6.000000e-54 222.0
7 TraesCS4A01G454900 chr7D 94.565 92 5 0 770 861 458524139 458524048 4.810000e-30 143.0
8 TraesCS4A01G454900 chr7D 95.522 67 3 0 2023 2089 26459114 26459180 1.750000e-19 108.0
9 TraesCS4A01G454900 chr7A 95.403 3763 135 7 862 4608 15035787 15039527 0.000000e+00 5956.0
10 TraesCS4A01G454900 chr7A 74.425 696 156 18 1062 1740 716233138 716233828 3.510000e-71 279.0
11 TraesCS4A01G454900 chr3D 95.119 1516 68 3 3094 4608 585379338 585377828 0.000000e+00 2385.0
12 TraesCS4A01G454900 chr3D 82.877 1022 164 10 3594 4608 23615676 23616693 0.000000e+00 907.0
13 TraesCS4A01G454900 chr3D 78.088 931 156 29 963 1872 23612419 23613322 3.140000e-151 545.0
14 TraesCS4A01G454900 chr3D 95.604 91 4 0 770 860 421266457 421266367 3.720000e-31 147.0
15 TraesCS4A01G454900 chr3D 95.455 88 4 0 770 857 597742665 597742578 1.730000e-29 141.0
16 TraesCS4A01G454900 chr3D 92.000 100 6 2 770 867 28990997 28990898 6.220000e-29 139.0
17 TraesCS4A01G454900 chr3A 88.493 1095 118 5 2677 3769 7498607 7497519 0.000000e+00 1317.0
18 TraesCS4A01G454900 chr3A 84.543 854 124 4 3762 4608 7487592 7486740 0.000000e+00 839.0
19 TraesCS4A01G454900 chr3A 87.021 470 53 4 952 1413 7500153 7499684 1.470000e-144 523.0
20 TraesCS4A01G454900 chr3A 90.213 235 23 0 1639 1873 7499683 7499449 1.610000e-79 307.0
21 TraesCS4A01G454900 chr5D 96.588 381 10 2 286 666 478504078 478503701 3.030000e-176 628.0
22 TraesCS4A01G454900 chr5D 72.089 1168 265 52 2726 3860 35963030 35961891 1.250000e-75 294.0
23 TraesCS4A01G454900 chr5D 94.444 90 5 0 770 859 204117158 204117069 6.220000e-29 139.0
24 TraesCS4A01G454900 chr5D 93.478 92 6 0 770 861 35992390 35992299 2.240000e-28 137.0
25 TraesCS4A01G454900 chr7B 95.337 386 16 2 286 671 61743732 61744115 3.050000e-171 612.0
26 TraesCS4A01G454900 chr7B 94.629 391 18 3 283 673 713659488 713659875 1.830000e-168 603.0
27 TraesCS4A01G454900 chr7B 76.074 815 161 26 985 1785 740995129 740994335 1.200000e-105 394.0
28 TraesCS4A01G454900 chr7B 75.970 670 126 28 1062 1709 719097422 719096766 3.460000e-81 313.0
29 TraesCS4A01G454900 chr7B 74.578 771 157 28 1033 1785 717167611 717166862 7.490000e-78 302.0
30 TraesCS4A01G454900 chr7B 74.578 771 157 28 1033 1785 717243355 717242606 7.490000e-78 302.0
31 TraesCS4A01G454900 chr7B 92.708 96 5 2 770 865 464539779 464539686 2.240000e-28 137.0
32 TraesCS4A01G454900 chr7B 81.935 155 24 4 2719 2871 717154752 717154600 1.350000e-25 128.0
33 TraesCS4A01G454900 chr7B 81.935 155 24 4 2719 2871 717230224 717230072 1.350000e-25 128.0
34 TraesCS4A01G454900 chrUn 95.263 380 14 3 286 665 15892103 15891728 2.370000e-167 599.0
35 TraesCS4A01G454900 chrUn 94.560 386 19 2 282 667 63181570 63181953 3.070000e-166 595.0
36 TraesCS4A01G454900 chrUn 71.489 1175 277 41 2722 3860 23407667 23408819 7.600000e-68 268.0
37 TraesCS4A01G454900 chr5A 94.588 388 18 2 283 670 164568505 164568889 8.530000e-167 597.0
38 TraesCS4A01G454900 chr5B 94.764 382 17 2 286 667 167648309 167647931 3.970000e-165 592.0
39 TraesCS4A01G454900 chr5B 71.589 1070 264 32 2809 3860 26875581 26874534 5.920000e-64 255.0
40 TraesCS4A01G454900 chr2B 94.118 391 18 4 284 674 211541241 211540856 1.430000e-164 590.0
41 TraesCS4A01G454900 chr2B 94.301 386 19 2 283 667 741923552 741923935 5.140000e-164 588.0
42 TraesCS4A01G454900 chr2B 90.909 99 7 1 770 868 597551691 597551595 1.040000e-26 132.0
43 TraesCS4A01G454900 chr6B 90.909 99 8 1 770 868 665555283 665555186 1.040000e-26 132.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G454900 chr4A 718854183 718858790 4607 False 8510.000000 8510 100.000000 1 4608 1 chr4A.!!$F2 4607
1 TraesCS4A01G454900 chr4A 714339212 714341126 1914 False 1304.000000 1304 79.353000 2699 4608 1 chr4A.!!$F1 1909
2 TraesCS4A01G454900 chr7D 16220011 16223727 3716 False 6028.000000 6028 95.840000 862 4608 1 chr7D.!!$F1 3746
3 TraesCS4A01G454900 chr7D 20261948 20262467 519 True 243.000000 243 75.758000 2722 3231 1 chr7D.!!$R1 509
4 TraesCS4A01G454900 chr7D 26458671 26459608 937 False 218.666667 326 91.285000 5 2514 3 chr7D.!!$F2 2509
5 TraesCS4A01G454900 chr7A 15035787 15039527 3740 False 5956.000000 5956 95.403000 862 4608 1 chr7A.!!$F1 3746
6 TraesCS4A01G454900 chr7A 716233138 716233828 690 False 279.000000 279 74.425000 1062 1740 1 chr7A.!!$F2 678
7 TraesCS4A01G454900 chr3D 585377828 585379338 1510 True 2385.000000 2385 95.119000 3094 4608 1 chr3D.!!$R3 1514
8 TraesCS4A01G454900 chr3D 23612419 23616693 4274 False 726.000000 907 80.482500 963 4608 2 chr3D.!!$F1 3645
9 TraesCS4A01G454900 chr3A 7486740 7487592 852 True 839.000000 839 84.543000 3762 4608 1 chr3A.!!$R1 846
10 TraesCS4A01G454900 chr3A 7497519 7500153 2634 True 715.666667 1317 88.575667 952 3769 3 chr3A.!!$R2 2817
11 TraesCS4A01G454900 chr5D 35961891 35963030 1139 True 294.000000 294 72.089000 2726 3860 1 chr5D.!!$R1 1134
12 TraesCS4A01G454900 chr7B 740994335 740995129 794 True 394.000000 394 76.074000 985 1785 1 chr7B.!!$R7 800
13 TraesCS4A01G454900 chr7B 719096766 719097422 656 True 313.000000 313 75.970000 1062 1709 1 chr7B.!!$R6 647
14 TraesCS4A01G454900 chr7B 717166862 717167611 749 True 302.000000 302 74.578000 1033 1785 1 chr7B.!!$R3 752
15 TraesCS4A01G454900 chr7B 717242606 717243355 749 True 302.000000 302 74.578000 1033 1785 1 chr7B.!!$R5 752
16 TraesCS4A01G454900 chrUn 23407667 23408819 1152 False 268.000000 268 71.489000 2722 3860 1 chrUn.!!$F1 1138
17 TraesCS4A01G454900 chr5B 26874534 26875581 1047 True 255.000000 255 71.589000 2809 3860 1 chr5B.!!$R1 1051

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
662 666 0.108019 AGTCCCTGGAAACGAACACC 59.892 55.0 0.00 0.0 0.00 4.16 F
1326 1343 0.320421 TTTTTCCTCGGCGTCTCCTG 60.320 55.0 6.85 0.0 0.00 3.86 F
2205 2310 1.092348 GATAAGACCCGGTTTGGTGC 58.908 55.0 0.00 0.0 39.24 5.01 F
3418 4871 0.605319 ATTTGTGTCGGGTGCACGAT 60.605 50.0 11.45 0.0 45.47 3.73 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2132 2221 1.340889 TGCAAGTGGCCAGTTCATTTC 59.659 47.619 23.37 10.26 43.89 2.17 R
3187 4627 1.527034 ACATCATGCAACGCTTGAGT 58.473 45.000 9.90 6.11 43.82 3.41 R
3574 5030 1.272648 CCATTCCACTCCCCATTGTGT 60.273 52.381 0.00 0.00 32.76 3.72 R
4560 6028 0.841961 ATGCTCTTATGCCAGCCTCA 59.158 50.000 0.00 0.00 34.47 3.86 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
38 39 6.874134 CCTAAAGGAGTTGATACCCGATATTG 59.126 42.308 0.00 0.00 37.39 1.90
107 108 4.668118 GCCCGTCGTCGTTTGGGA 62.668 66.667 18.88 0.00 44.88 4.37
139 140 6.889301 AAATCTTGTATGCCATCATAGTGG 57.111 37.500 0.00 0.00 42.35 4.00
150 151 4.576463 GCCATCATAGTGGTTAAAGTGGAG 59.424 45.833 0.00 0.00 41.47 3.86
154 155 4.041075 TCATAGTGGTTAAAGTGGAGTGCA 59.959 41.667 0.00 0.00 0.00 4.57
161 162 6.007076 TGGTTAAAGTGGAGTGCATTGATTA 58.993 36.000 0.00 0.00 0.00 1.75
169 170 6.660521 AGTGGAGTGCATTGATTATTTGAGAA 59.339 34.615 0.00 0.00 0.00 2.87
172 173 8.533657 TGGAGTGCATTGATTATTTGAGAAAAT 58.466 29.630 0.00 0.00 0.00 1.82
174 175 9.577110 GAGTGCATTGATTATTTGAGAAAATCA 57.423 29.630 0.00 0.00 37.73 2.57
200 201 5.413969 GTTGTAAACTTAGCGACACCTTT 57.586 39.130 0.00 0.00 45.32 3.11
209 210 3.134574 AGCGACACCTTTAATTGGTCA 57.865 42.857 0.00 0.00 35.28 4.02
210 211 3.686016 AGCGACACCTTTAATTGGTCAT 58.314 40.909 0.00 0.00 35.28 3.06
211 212 4.839121 AGCGACACCTTTAATTGGTCATA 58.161 39.130 0.00 0.00 35.28 2.15
214 215 5.798434 GCGACACCTTTAATTGGTCATAAAC 59.202 40.000 0.00 0.00 35.28 2.01
254 258 8.844244 AGTCATGGTCAAGAAATAAATAGCATC 58.156 33.333 0.00 0.00 0.00 3.91
255 259 8.623903 GTCATGGTCAAGAAATAAATAGCATCA 58.376 33.333 0.00 0.00 0.00 3.07
259 263 7.122501 TGGTCAAGAAATAAATAGCATCAGCAA 59.877 33.333 0.00 0.00 45.49 3.91
266 270 3.607490 AATAGCATCAGCAAAGGGGAT 57.393 42.857 0.00 0.00 45.49 3.85
267 271 2.353357 TAGCATCAGCAAAGGGGATG 57.647 50.000 0.00 0.00 45.49 3.51
269 273 1.006281 AGCATCAGCAAAGGGGATGAA 59.994 47.619 5.14 0.00 45.49 2.57
293 297 2.527624 TGAGTGCTCAGGCCCTGT 60.528 61.111 11.27 0.00 37.74 4.00
294 298 2.149383 TGAGTGCTCAGGCCCTGTT 61.149 57.895 11.27 0.00 37.74 3.16
295 299 1.073897 GAGTGCTCAGGCCCTGTTT 59.926 57.895 11.27 0.00 37.74 2.83
296 300 1.228367 AGTGCTCAGGCCCTGTTTG 60.228 57.895 11.27 3.84 37.74 2.93
297 301 2.115910 TGCTCAGGCCCTGTTTGG 59.884 61.111 11.27 1.34 37.74 3.28
298 302 2.116125 GCTCAGGCCCTGTTTGGT 59.884 61.111 11.27 0.00 32.61 3.67
299 303 1.531602 GCTCAGGCCCTGTTTGGTT 60.532 57.895 11.27 0.00 32.61 3.67
300 304 1.527433 GCTCAGGCCCTGTTTGGTTC 61.527 60.000 11.27 0.00 32.61 3.62
301 305 0.178992 CTCAGGCCCTGTTTGGTTCA 60.179 55.000 11.27 0.00 32.61 3.18
302 306 0.482446 TCAGGCCCTGTTTGGTTCAT 59.518 50.000 11.27 0.00 32.61 2.57
303 307 1.707989 TCAGGCCCTGTTTGGTTCATA 59.292 47.619 11.27 0.00 32.61 2.15
304 308 2.109128 TCAGGCCCTGTTTGGTTCATAA 59.891 45.455 11.27 0.00 32.61 1.90
305 309 2.493278 CAGGCCCTGTTTGGTTCATAAG 59.507 50.000 1.39 0.00 0.00 1.73
307 311 2.492088 GGCCCTGTTTGGTTCATAAGTC 59.508 50.000 0.00 0.00 0.00 3.01
308 312 2.492088 GCCCTGTTTGGTTCATAAGTCC 59.508 50.000 0.00 0.00 0.00 3.85
309 313 3.814316 GCCCTGTTTGGTTCATAAGTCCT 60.814 47.826 0.00 0.00 0.00 3.85
310 314 4.566907 GCCCTGTTTGGTTCATAAGTCCTA 60.567 45.833 0.00 0.00 0.00 2.94
311 315 5.186198 CCCTGTTTGGTTCATAAGTCCTAG 58.814 45.833 0.00 0.00 0.00 3.02
312 316 5.186198 CCTGTTTGGTTCATAAGTCCTAGG 58.814 45.833 0.82 0.82 0.00 3.02
313 317 5.045869 CCTGTTTGGTTCATAAGTCCTAGGA 60.046 44.000 7.62 7.62 0.00 2.94
314 318 5.801380 TGTTTGGTTCATAAGTCCTAGGAC 58.199 41.667 31.29 31.29 44.86 3.85
338 342 8.818622 ACTTTTTCTAGTCCCAACTAAAAAGT 57.181 30.769 17.77 17.77 46.78 2.66
340 344 7.812690 TTTTCTAGTCCCAACTAAAAAGTCC 57.187 36.000 0.00 0.00 37.53 3.85
341 345 6.758806 TTCTAGTCCCAACTAAAAAGTCCT 57.241 37.500 0.00 0.00 37.53 3.85
342 346 6.758806 TCTAGTCCCAACTAAAAAGTCCTT 57.241 37.500 0.00 0.00 37.53 3.36
343 347 7.860649 TCTAGTCCCAACTAAAAAGTCCTTA 57.139 36.000 0.00 0.00 37.53 2.69
344 348 7.904205 TCTAGTCCCAACTAAAAAGTCCTTAG 58.096 38.462 0.00 0.00 37.53 2.18
345 349 6.511017 AGTCCCAACTAAAAAGTCCTTAGT 57.489 37.500 0.00 0.00 40.52 2.24
346 350 6.531923 AGTCCCAACTAAAAAGTCCTTAGTC 58.468 40.000 0.00 0.00 38.38 2.59
347 351 5.704515 GTCCCAACTAAAAAGTCCTTAGTCC 59.295 44.000 0.00 0.00 38.38 3.85
348 352 5.008331 CCCAACTAAAAAGTCCTTAGTCCC 58.992 45.833 0.00 0.00 38.38 4.46
349 353 5.222068 CCCAACTAAAAAGTCCTTAGTCCCT 60.222 44.000 0.00 0.00 38.38 4.20
350 354 6.013119 CCCAACTAAAAAGTCCTTAGTCCCTA 60.013 42.308 0.00 0.00 38.38 3.53
351 355 7.455891 CCAACTAAAAAGTCCTTAGTCCCTAA 58.544 38.462 0.00 0.00 38.38 2.69
352 356 7.940688 CCAACTAAAAAGTCCTTAGTCCCTAAA 59.059 37.037 0.00 0.00 38.38 1.85
353 357 9.346005 CAACTAAAAAGTCCTTAGTCCCTAAAA 57.654 33.333 0.00 0.00 38.38 1.52
354 358 9.925545 AACTAAAAAGTCCTTAGTCCCTAAAAA 57.074 29.630 0.00 0.00 38.38 1.94
355 359 9.570468 ACTAAAAAGTCCTTAGTCCCTAAAAAG 57.430 33.333 0.00 0.00 35.16 2.27
356 360 9.570468 CTAAAAAGTCCTTAGTCCCTAAAAAGT 57.430 33.333 0.00 0.00 0.00 2.66
357 361 8.461249 AAAAAGTCCTTAGTCCCTAAAAAGTC 57.539 34.615 0.00 0.00 0.00 3.01
358 362 5.758790 AGTCCTTAGTCCCTAAAAAGTCC 57.241 43.478 0.00 0.00 0.00 3.85
359 363 4.535294 AGTCCTTAGTCCCTAAAAAGTCCC 59.465 45.833 0.00 0.00 0.00 4.46
360 364 4.535294 GTCCTTAGTCCCTAAAAAGTCCCT 59.465 45.833 0.00 0.00 0.00 4.20
361 365 4.781621 TCCTTAGTCCCTAAAAAGTCCCTC 59.218 45.833 0.00 0.00 0.00 4.30
362 366 4.080469 CCTTAGTCCCTAAAAAGTCCCTCC 60.080 50.000 0.00 0.00 0.00 4.30
363 367 2.276391 AGTCCCTAAAAAGTCCCTCCC 58.724 52.381 0.00 0.00 0.00 4.30
364 368 2.157833 AGTCCCTAAAAAGTCCCTCCCT 60.158 50.000 0.00 0.00 0.00 4.20
365 369 2.026169 GTCCCTAAAAAGTCCCTCCCTG 60.026 54.545 0.00 0.00 0.00 4.45
366 370 1.993301 CCCTAAAAAGTCCCTCCCTGT 59.007 52.381 0.00 0.00 0.00 4.00
367 371 2.378886 CCCTAAAAAGTCCCTCCCTGTT 59.621 50.000 0.00 0.00 0.00 3.16
368 372 3.181422 CCCTAAAAAGTCCCTCCCTGTTT 60.181 47.826 0.00 0.00 0.00 2.83
369 373 3.826729 CCTAAAAAGTCCCTCCCTGTTTG 59.173 47.826 0.00 0.00 0.00 2.93
370 374 3.398318 AAAAAGTCCCTCCCTGTTTGT 57.602 42.857 0.00 0.00 0.00 2.83
371 375 3.398318 AAAAGTCCCTCCCTGTTTGTT 57.602 42.857 0.00 0.00 0.00 2.83
372 376 3.398318 AAAGTCCCTCCCTGTTTGTTT 57.602 42.857 0.00 0.00 0.00 2.83
373 377 2.658807 AGTCCCTCCCTGTTTGTTTC 57.341 50.000 0.00 0.00 0.00 2.78
374 378 1.145119 AGTCCCTCCCTGTTTGTTTCC 59.855 52.381 0.00 0.00 0.00 3.13
375 379 1.133606 GTCCCTCCCTGTTTGTTTCCA 60.134 52.381 0.00 0.00 0.00 3.53
376 380 1.144913 TCCCTCCCTGTTTGTTTCCAG 59.855 52.381 0.00 0.00 0.00 3.86
377 381 1.144913 CCCTCCCTGTTTGTTTCCAGA 59.855 52.381 0.00 0.00 0.00 3.86
378 382 2.508526 CCTCCCTGTTTGTTTCCAGAG 58.491 52.381 0.00 0.00 0.00 3.35
379 383 2.106511 CCTCCCTGTTTGTTTCCAGAGA 59.893 50.000 0.00 0.00 0.00 3.10
380 384 3.142174 CTCCCTGTTTGTTTCCAGAGAC 58.858 50.000 0.00 0.00 0.00 3.36
381 385 2.777692 TCCCTGTTTGTTTCCAGAGACT 59.222 45.455 0.00 0.00 0.00 3.24
382 386 3.971305 TCCCTGTTTGTTTCCAGAGACTA 59.029 43.478 0.00 0.00 0.00 2.59
383 387 4.410883 TCCCTGTTTGTTTCCAGAGACTAA 59.589 41.667 0.00 0.00 0.00 2.24
384 388 5.104277 TCCCTGTTTGTTTCCAGAGACTAAA 60.104 40.000 0.00 0.00 0.00 1.85
385 389 5.592688 CCCTGTTTGTTTCCAGAGACTAAAA 59.407 40.000 0.00 0.00 0.00 1.52
386 390 6.096282 CCCTGTTTGTTTCCAGAGACTAAAAA 59.904 38.462 0.00 0.00 0.00 1.94
387 391 7.196331 CCTGTTTGTTTCCAGAGACTAAAAAG 58.804 38.462 0.00 0.00 0.00 2.27
388 392 7.148069 CCTGTTTGTTTCCAGAGACTAAAAAGT 60.148 37.037 0.00 0.00 0.00 2.66
389 393 7.758495 TGTTTGTTTCCAGAGACTAAAAAGTC 58.242 34.615 0.00 0.00 39.00 3.01
390 394 6.937436 TTGTTTCCAGAGACTAAAAAGTCC 57.063 37.500 2.00 0.00 39.50 3.85
391 395 5.374071 TGTTTCCAGAGACTAAAAAGTCCC 58.626 41.667 2.00 0.00 39.50 4.46
392 396 5.132144 TGTTTCCAGAGACTAAAAAGTCCCT 59.868 40.000 2.00 0.00 39.50 4.20
393 397 6.328148 TGTTTCCAGAGACTAAAAAGTCCCTA 59.672 38.462 2.00 0.00 39.50 3.53
394 398 6.607004 TTCCAGAGACTAAAAAGTCCCTAG 57.393 41.667 2.00 0.00 39.50 3.02
395 399 5.652324 TCCAGAGACTAAAAAGTCCCTAGT 58.348 41.667 2.00 0.00 39.50 2.57
396 400 5.715753 TCCAGAGACTAAAAAGTCCCTAGTC 59.284 44.000 2.00 0.00 41.17 2.59
397 401 5.105269 CCAGAGACTAAAAAGTCCCTAGTCC 60.105 48.000 2.00 0.00 41.59 3.85
398 402 5.024785 AGAGACTAAAAAGTCCCTAGTCCC 58.975 45.833 2.00 0.00 41.59 4.46
399 403 5.024785 GAGACTAAAAAGTCCCTAGTCCCT 58.975 45.833 2.00 0.00 41.59 4.20
400 404 5.413277 AGACTAAAAAGTCCCTAGTCCCTT 58.587 41.667 2.00 0.00 41.59 3.95
401 405 5.484644 AGACTAAAAAGTCCCTAGTCCCTTC 59.515 44.000 2.00 0.00 41.59 3.46
402 406 4.535294 ACTAAAAAGTCCCTAGTCCCTTCC 59.465 45.833 0.00 0.00 0.00 3.46
403 407 3.293215 AAAAGTCCCTAGTCCCTTCCT 57.707 47.619 0.00 0.00 0.00 3.36
404 408 4.431158 AAAAGTCCCTAGTCCCTTCCTA 57.569 45.455 0.00 0.00 0.00 2.94
405 409 3.691698 AAGTCCCTAGTCCCTTCCTAG 57.308 52.381 0.00 0.00 33.23 3.02
406 410 2.874447 AGTCCCTAGTCCCTTCCTAGA 58.126 52.381 0.00 0.00 35.01 2.43
407 411 2.787035 AGTCCCTAGTCCCTTCCTAGAG 59.213 54.545 0.00 0.00 35.01 2.43
408 412 2.145298 TCCCTAGTCCCTTCCTAGAGG 58.855 57.143 0.00 0.00 35.01 3.69
409 413 1.860906 CCCTAGTCCCTTCCTAGAGGT 59.139 57.143 0.00 0.00 35.01 3.85
410 414 2.247897 CCCTAGTCCCTTCCTAGAGGTT 59.752 54.545 0.00 0.00 35.01 3.50
411 415 3.466344 CCCTAGTCCCTTCCTAGAGGTTA 59.534 52.174 0.00 0.00 35.01 2.85
412 416 4.108287 CCCTAGTCCCTTCCTAGAGGTTAT 59.892 50.000 0.00 0.00 35.01 1.89
413 417 5.401587 CCCTAGTCCCTTCCTAGAGGTTATT 60.402 48.000 0.00 0.00 35.01 1.40
414 418 6.183361 CCCTAGTCCCTTCCTAGAGGTTATTA 60.183 46.154 0.00 0.00 35.01 0.98
415 419 7.303713 CCTAGTCCCTTCCTAGAGGTTATTAA 58.696 42.308 0.00 0.00 35.01 1.40
416 420 7.788385 CCTAGTCCCTTCCTAGAGGTTATTAAA 59.212 40.741 0.00 0.00 35.01 1.52
417 421 9.382307 CTAGTCCCTTCCTAGAGGTTATTAAAT 57.618 37.037 0.00 0.00 35.01 1.40
418 422 8.035448 AGTCCCTTCCTAGAGGTTATTAAATG 57.965 38.462 0.00 0.00 34.88 2.32
419 423 7.849904 AGTCCCTTCCTAGAGGTTATTAAATGA 59.150 37.037 0.00 0.00 34.88 2.57
420 424 7.932491 GTCCCTTCCTAGAGGTTATTAAATGAC 59.068 40.741 0.00 0.00 34.88 3.06
421 425 7.072076 TCCCTTCCTAGAGGTTATTAAATGACC 59.928 40.741 0.00 0.00 39.09 4.02
422 426 7.147373 CCCTTCCTAGAGGTTATTAAATGACCA 60.147 40.741 6.26 0.00 41.10 4.02
423 427 8.440771 CCTTCCTAGAGGTTATTAAATGACCAT 58.559 37.037 6.26 0.00 41.10 3.55
424 428 9.277783 CTTCCTAGAGGTTATTAAATGACCATG 57.722 37.037 6.26 0.00 41.10 3.66
425 429 8.331931 TCCTAGAGGTTATTAAATGACCATGT 57.668 34.615 6.26 0.00 41.10 3.21
426 430 8.778059 TCCTAGAGGTTATTAAATGACCATGTT 58.222 33.333 6.26 0.00 41.10 2.71
427 431 8.840321 CCTAGAGGTTATTAAATGACCATGTTG 58.160 37.037 6.26 0.00 41.10 3.33
428 432 7.100458 AGAGGTTATTAAATGACCATGTTGC 57.900 36.000 6.26 0.00 41.10 4.17
429 433 6.096846 AGAGGTTATTAAATGACCATGTTGCC 59.903 38.462 6.26 0.00 41.10 4.52
430 434 5.128663 AGGTTATTAAATGACCATGTTGCCC 59.871 40.000 6.26 0.00 41.10 5.36
431 435 5.356426 GTTATTAAATGACCATGTTGCCCC 58.644 41.667 0.00 0.00 0.00 5.80
432 436 2.917713 TAAATGACCATGTTGCCCCT 57.082 45.000 0.00 0.00 0.00 4.79
433 437 2.917713 AAATGACCATGTTGCCCCTA 57.082 45.000 0.00 0.00 0.00 3.53
434 438 2.442236 AATGACCATGTTGCCCCTAG 57.558 50.000 0.00 0.00 0.00 3.02
435 439 1.298953 ATGACCATGTTGCCCCTAGT 58.701 50.000 0.00 0.00 0.00 2.57
436 440 1.959710 TGACCATGTTGCCCCTAGTA 58.040 50.000 0.00 0.00 0.00 1.82
437 441 2.487775 TGACCATGTTGCCCCTAGTAT 58.512 47.619 0.00 0.00 0.00 2.12
438 442 3.659841 TGACCATGTTGCCCCTAGTATA 58.340 45.455 0.00 0.00 0.00 1.47
439 443 4.239495 TGACCATGTTGCCCCTAGTATAT 58.761 43.478 0.00 0.00 0.00 0.86
440 444 5.407936 TGACCATGTTGCCCCTAGTATATA 58.592 41.667 0.00 0.00 0.00 0.86
441 445 5.483937 TGACCATGTTGCCCCTAGTATATAG 59.516 44.000 0.00 0.00 0.00 1.31
442 446 5.661565 ACCATGTTGCCCCTAGTATATAGA 58.338 41.667 0.00 0.00 0.00 1.98
443 447 6.088819 ACCATGTTGCCCCTAGTATATAGAA 58.911 40.000 0.00 0.00 0.00 2.10
444 448 6.561070 ACCATGTTGCCCCTAGTATATAGAAA 59.439 38.462 0.00 0.00 0.00 2.52
445 449 7.073215 ACCATGTTGCCCCTAGTATATAGAAAA 59.927 37.037 0.00 0.00 0.00 2.29
446 450 7.942341 CCATGTTGCCCCTAGTATATAGAAAAA 59.058 37.037 0.00 0.00 0.00 1.94
447 451 9.520515 CATGTTGCCCCTAGTATATAGAAAAAT 57.479 33.333 0.00 0.00 0.00 1.82
466 470 9.612066 AGAAAAATAACAATCAAACAACACCAT 57.388 25.926 0.00 0.00 0.00 3.55
469 473 9.487790 AAAATAACAATCAAACAACACCATAGG 57.512 29.630 0.00 0.00 0.00 2.57
470 474 5.467035 AACAATCAAACAACACCATAGGG 57.533 39.130 0.00 0.00 41.29 3.53
490 494 3.228759 GCGGGCCAATGGATGCAT 61.229 61.111 2.05 0.00 0.00 3.96
491 495 2.732016 CGGGCCAATGGATGCATG 59.268 61.111 2.46 0.00 0.00 4.06
492 496 2.863346 CGGGCCAATGGATGCATGG 61.863 63.158 2.46 0.11 37.29 3.66
493 497 1.458020 GGGCCAATGGATGCATGGA 60.458 57.895 2.46 0.00 36.27 3.41
494 498 1.469335 GGGCCAATGGATGCATGGAG 61.469 60.000 2.46 4.05 36.27 3.86
495 499 1.469335 GGCCAATGGATGCATGGAGG 61.469 60.000 2.46 12.51 36.27 4.30
496 500 1.469335 GCCAATGGATGCATGGAGGG 61.469 60.000 2.46 10.22 36.27 4.30
497 501 0.830444 CCAATGGATGCATGGAGGGG 60.830 60.000 2.46 0.00 36.27 4.79
498 502 1.152398 AATGGATGCATGGAGGGGC 60.152 57.895 2.46 0.00 0.00 5.80
499 503 1.951923 AATGGATGCATGGAGGGGCA 61.952 55.000 2.46 0.00 45.23 5.36
503 507 2.772224 TGCATGGAGGGGCATTGT 59.228 55.556 0.00 0.00 34.58 2.71
504 508 1.078891 TGCATGGAGGGGCATTGTT 59.921 52.632 0.00 0.00 34.58 2.83
505 509 1.259142 TGCATGGAGGGGCATTGTTG 61.259 55.000 0.00 0.00 34.58 3.33
506 510 1.963464 GCATGGAGGGGCATTGTTGG 61.963 60.000 0.00 0.00 0.00 3.77
507 511 0.324552 CATGGAGGGGCATTGTTGGA 60.325 55.000 0.00 0.00 0.00 3.53
508 512 0.413037 ATGGAGGGGCATTGTTGGAA 59.587 50.000 0.00 0.00 0.00 3.53
509 513 0.189574 TGGAGGGGCATTGTTGGAAA 59.810 50.000 0.00 0.00 0.00 3.13
510 514 1.347062 GGAGGGGCATTGTTGGAAAA 58.653 50.000 0.00 0.00 0.00 2.29
511 515 1.276138 GGAGGGGCATTGTTGGAAAAG 59.724 52.381 0.00 0.00 0.00 2.27
512 516 1.970640 GAGGGGCATTGTTGGAAAAGT 59.029 47.619 0.00 0.00 0.00 2.66
513 517 1.970640 AGGGGCATTGTTGGAAAAGTC 59.029 47.619 0.00 0.00 0.00 3.01
514 518 1.001974 GGGGCATTGTTGGAAAAGTCC 59.998 52.381 0.00 0.00 45.21 3.85
515 519 1.001974 GGGCATTGTTGGAAAAGTCCC 59.998 52.381 0.00 0.00 44.23 4.46
516 520 1.691434 GGCATTGTTGGAAAAGTCCCA 59.309 47.619 0.00 0.00 44.23 4.37
517 521 2.103941 GGCATTGTTGGAAAAGTCCCAA 59.896 45.455 0.00 0.00 44.23 4.12
518 522 3.432890 GGCATTGTTGGAAAAGTCCCAAA 60.433 43.478 0.00 0.00 44.41 3.28
519 523 4.195416 GCATTGTTGGAAAAGTCCCAAAA 58.805 39.130 0.00 0.00 44.41 2.44
520 524 4.637977 GCATTGTTGGAAAAGTCCCAAAAA 59.362 37.500 0.00 0.00 44.41 1.94
549 553 6.678568 TCTCCTTGAGAGTCTTCTTCATTT 57.321 37.500 0.00 0.00 43.71 2.32
550 554 7.782897 TCTCCTTGAGAGTCTTCTTCATTTA 57.217 36.000 0.00 0.00 43.71 1.40
551 555 7.835822 TCTCCTTGAGAGTCTTCTTCATTTAG 58.164 38.462 0.00 0.00 43.71 1.85
552 556 7.453126 TCTCCTTGAGAGTCTTCTTCATTTAGT 59.547 37.037 0.00 0.00 43.71 2.24
553 557 7.607250 TCCTTGAGAGTCTTCTTCATTTAGTC 58.393 38.462 0.00 0.00 32.53 2.59
554 558 6.816140 CCTTGAGAGTCTTCTTCATTTAGTCC 59.184 42.308 0.00 0.00 32.53 3.85
555 559 6.287589 TGAGAGTCTTCTTCATTTAGTCCC 57.712 41.667 0.00 0.00 32.53 4.46
556 560 5.780282 TGAGAGTCTTCTTCATTTAGTCCCA 59.220 40.000 0.00 0.00 32.53 4.37
557 561 6.270000 TGAGAGTCTTCTTCATTTAGTCCCAA 59.730 38.462 0.00 0.00 32.53 4.12
558 562 7.079451 AGAGTCTTCTTCATTTAGTCCCAAA 57.921 36.000 0.00 0.00 0.00 3.28
559 563 7.694093 AGAGTCTTCTTCATTTAGTCCCAAAT 58.306 34.615 0.00 0.00 0.00 2.32
560 564 7.609532 AGAGTCTTCTTCATTTAGTCCCAAATG 59.390 37.037 2.83 2.83 44.00 2.32
561 565 6.151817 AGTCTTCTTCATTTAGTCCCAAATGC 59.848 38.462 4.14 0.00 42.89 3.56
562 566 5.418840 TCTTCTTCATTTAGTCCCAAATGCC 59.581 40.000 4.14 0.00 42.89 4.40
563 567 4.934356 TCTTCATTTAGTCCCAAATGCCT 58.066 39.130 4.14 0.00 42.89 4.75
564 568 6.073447 TCTTCATTTAGTCCCAAATGCCTA 57.927 37.500 4.14 0.00 42.89 3.93
565 569 6.489603 TCTTCATTTAGTCCCAAATGCCTAA 58.510 36.000 4.14 0.00 42.89 2.69
566 570 7.125391 TCTTCATTTAGTCCCAAATGCCTAAT 58.875 34.615 4.14 0.00 42.89 1.73
567 571 7.619302 TCTTCATTTAGTCCCAAATGCCTAATT 59.381 33.333 4.14 0.00 42.89 1.40
568 572 7.732222 TCATTTAGTCCCAAATGCCTAATTT 57.268 32.000 4.14 0.00 42.89 1.82
569 573 8.830915 TCATTTAGTCCCAAATGCCTAATTTA 57.169 30.769 4.14 0.00 42.89 1.40
570 574 8.912988 TCATTTAGTCCCAAATGCCTAATTTAG 58.087 33.333 4.14 0.00 42.89 1.85
571 575 8.695456 CATTTAGTCCCAAATGCCTAATTTAGT 58.305 33.333 2.88 0.00 38.63 2.24
572 576 8.658840 TTTAGTCCCAAATGCCTAATTTAGTT 57.341 30.769 2.88 0.00 36.28 2.24
573 577 6.775594 AGTCCCAAATGCCTAATTTAGTTC 57.224 37.500 2.88 0.00 36.28 3.01
574 578 5.656859 AGTCCCAAATGCCTAATTTAGTTCC 59.343 40.000 2.88 0.00 36.28 3.62
575 579 5.656859 GTCCCAAATGCCTAATTTAGTTCCT 59.343 40.000 2.88 0.00 36.28 3.36
576 580 6.831868 GTCCCAAATGCCTAATTTAGTTCCTA 59.168 38.462 2.88 0.00 36.28 2.94
577 581 7.340999 GTCCCAAATGCCTAATTTAGTTCCTAA 59.659 37.037 2.88 0.00 36.28 2.69
578 582 7.896496 TCCCAAATGCCTAATTTAGTTCCTAAA 59.104 33.333 2.88 0.00 39.73 1.85
579 583 8.536175 CCCAAATGCCTAATTTAGTTCCTAAAA 58.464 33.333 2.88 0.00 39.03 1.52
580 584 9.936759 CCAAATGCCTAATTTAGTTCCTAAAAA 57.063 29.630 2.88 0.00 39.03 1.94
584 588 8.344446 TGCCTAATTTAGTTCCTAAAAAGTCC 57.656 34.615 2.88 0.00 39.03 3.85
585 589 7.395206 TGCCTAATTTAGTTCCTAAAAAGTCCC 59.605 37.037 2.88 0.00 39.03 4.46
586 590 7.614583 GCCTAATTTAGTTCCTAAAAAGTCCCT 59.385 37.037 2.88 0.00 39.03 4.20
587 591 9.175312 CCTAATTTAGTTCCTAAAAAGTCCCTC 57.825 37.037 2.88 0.00 39.03 4.30
588 592 9.175312 CTAATTTAGTTCCTAAAAAGTCCCTCC 57.825 37.037 0.97 0.00 39.03 4.30
589 593 5.509832 TTAGTTCCTAAAAAGTCCCTCCC 57.490 43.478 0.00 0.00 0.00 4.30
590 594 2.305052 AGTTCCTAAAAAGTCCCTCCCG 59.695 50.000 0.00 0.00 0.00 5.14
591 595 2.034436 TCCTAAAAAGTCCCTCCCGT 57.966 50.000 0.00 0.00 0.00 5.28
592 596 2.341695 TCCTAAAAAGTCCCTCCCGTT 58.658 47.619 0.00 0.00 0.00 4.44
593 597 2.712627 TCCTAAAAAGTCCCTCCCGTTT 59.287 45.455 0.00 0.00 0.00 3.60
594 598 2.817844 CCTAAAAAGTCCCTCCCGTTTG 59.182 50.000 0.00 0.00 0.00 2.93
595 599 1.699730 AAAAAGTCCCTCCCGTTTGG 58.300 50.000 0.00 0.00 0.00 3.28
596 600 0.554305 AAAAGTCCCTCCCGTTTGGT 59.446 50.000 0.00 0.00 34.77 3.67
597 601 1.437397 AAAGTCCCTCCCGTTTGGTA 58.563 50.000 0.00 0.00 34.77 3.25
598 602 1.437397 AAGTCCCTCCCGTTTGGTAA 58.563 50.000 0.00 0.00 34.77 2.85
599 603 1.437397 AGTCCCTCCCGTTTGGTAAA 58.563 50.000 0.00 0.00 34.77 2.01
600 604 1.776063 AGTCCCTCCCGTTTGGTAAAA 59.224 47.619 0.00 0.00 34.77 1.52
601 605 2.175284 AGTCCCTCCCGTTTGGTAAAAA 59.825 45.455 0.00 0.00 34.77 1.94
631 635 9.414295 GTCTCTAAGAGAAACTTTTTCTAGTCC 57.586 37.037 1.16 0.00 40.59 3.85
632 636 8.586744 TCTCTAAGAGAAACTTTTTCTAGTCCC 58.413 37.037 1.16 0.00 39.72 4.46
633 637 8.493787 TCTAAGAGAAACTTTTTCTAGTCCCT 57.506 34.615 1.16 0.00 39.72 4.20
634 638 9.597681 TCTAAGAGAAACTTTTTCTAGTCCCTA 57.402 33.333 1.16 0.00 39.72 3.53
638 642 9.322769 AGAGAAACTTTTTCTAGTCCCTATACA 57.677 33.333 1.16 0.00 0.00 2.29
639 643 9.939802 GAGAAACTTTTTCTAGTCCCTATACAA 57.060 33.333 1.16 0.00 0.00 2.41
660 664 2.721425 AAAGTCCCTGGAAACGAACA 57.279 45.000 0.00 0.00 0.00 3.18
661 665 1.963172 AAGTCCCTGGAAACGAACAC 58.037 50.000 0.00 0.00 0.00 3.32
662 666 0.108019 AGTCCCTGGAAACGAACACC 59.892 55.000 0.00 0.00 0.00 4.16
663 667 0.887836 GTCCCTGGAAACGAACACCC 60.888 60.000 0.00 0.00 0.00 4.61
664 668 1.602605 CCCTGGAAACGAACACCCC 60.603 63.158 0.00 0.00 0.00 4.95
665 669 1.602605 CCTGGAAACGAACACCCCC 60.603 63.158 0.00 0.00 0.00 5.40
666 670 1.454539 CTGGAAACGAACACCCCCT 59.545 57.895 0.00 0.00 0.00 4.79
667 671 0.605589 CTGGAAACGAACACCCCCTC 60.606 60.000 0.00 0.00 0.00 4.30
668 672 1.346479 TGGAAACGAACACCCCCTCA 61.346 55.000 0.00 0.00 0.00 3.86
669 673 0.605589 GGAAACGAACACCCCCTCAG 60.606 60.000 0.00 0.00 0.00 3.35
670 674 0.108019 GAAACGAACACCCCCTCAGT 59.892 55.000 0.00 0.00 0.00 3.41
671 675 0.108019 AAACGAACACCCCCTCAGTC 59.892 55.000 0.00 0.00 0.00 3.51
672 676 0.763223 AACGAACACCCCCTCAGTCT 60.763 55.000 0.00 0.00 0.00 3.24
678 682 2.472029 ACACCCCCTCAGTCTTCTATG 58.528 52.381 0.00 0.00 0.00 2.23
682 686 2.697751 CCCCCTCAGTCTTCTATGAGTG 59.302 54.545 1.92 0.00 41.13 3.51
689 693 3.636300 CAGTCTTCTATGAGTGAGAGGGG 59.364 52.174 0.00 0.00 39.14 4.79
715 719 3.947868 GGGGGTTCACTAGTTTTACTCC 58.052 50.000 8.55 8.55 0.00 3.85
716 720 3.328637 GGGGGTTCACTAGTTTTACTCCA 59.671 47.826 15.89 0.00 30.73 3.86
717 721 4.202493 GGGGGTTCACTAGTTTTACTCCAA 60.202 45.833 15.89 0.00 30.73 3.53
718 722 5.516062 GGGGGTTCACTAGTTTTACTCCAAT 60.516 44.000 15.89 0.00 30.73 3.16
719 723 6.296605 GGGGGTTCACTAGTTTTACTCCAATA 60.297 42.308 15.89 0.00 30.73 1.90
720 724 7.344134 GGGGTTCACTAGTTTTACTCCAATAT 58.656 38.462 11.20 0.00 29.56 1.28
721 725 8.488668 GGGGTTCACTAGTTTTACTCCAATATA 58.511 37.037 11.20 0.00 29.56 0.86
722 726 9.895138 GGGTTCACTAGTTTTACTCCAATATAA 57.105 33.333 0.00 0.00 0.00 0.98
780 784 8.682936 AGACATTTATCAACACAGTTTTCTCT 57.317 30.769 0.00 0.00 0.00 3.10
781 785 9.778741 AGACATTTATCAACACAGTTTTCTCTA 57.221 29.630 0.00 0.00 0.00 2.43
789 793 8.365399 TCAACACAGTTTTCTCTATACACTTG 57.635 34.615 0.00 0.00 0.00 3.16
790 794 7.441157 TCAACACAGTTTTCTCTATACACTTGG 59.559 37.037 0.00 0.00 0.00 3.61
791 795 6.827727 ACACAGTTTTCTCTATACACTTGGT 58.172 36.000 0.00 0.00 0.00 3.67
792 796 6.929606 ACACAGTTTTCTCTATACACTTGGTC 59.070 38.462 0.00 0.00 0.00 4.02
793 797 6.929049 CACAGTTTTCTCTATACACTTGGTCA 59.071 38.462 0.00 0.00 0.00 4.02
794 798 7.441157 CACAGTTTTCTCTATACACTTGGTCAA 59.559 37.037 0.00 0.00 0.00 3.18
795 799 7.990886 ACAGTTTTCTCTATACACTTGGTCAAA 59.009 33.333 0.00 0.00 0.00 2.69
796 800 8.836413 CAGTTTTCTCTATACACTTGGTCAAAA 58.164 33.333 0.00 0.00 0.00 2.44
797 801 9.574516 AGTTTTCTCTATACACTTGGTCAAAAT 57.425 29.630 0.00 0.00 0.00 1.82
800 804 7.921786 TCTCTATACACTTGGTCAAAATTGG 57.078 36.000 0.00 0.00 0.00 3.16
801 805 6.374333 TCTCTATACACTTGGTCAAAATTGGC 59.626 38.462 0.00 0.00 0.00 4.52
802 806 6.007076 TCTATACACTTGGTCAAAATTGGCA 58.993 36.000 0.00 0.00 33.59 4.92
803 807 3.902881 ACACTTGGTCAAAATTGGCAA 57.097 38.095 0.68 0.68 33.59 4.52
804 808 3.530535 ACACTTGGTCAAAATTGGCAAC 58.469 40.909 0.00 0.00 33.59 4.17
821 825 6.748333 TGGCAACATTTGATTTTCACAAAA 57.252 29.167 0.00 0.00 46.17 2.44
822 826 7.149569 TGGCAACATTTGATTTTCACAAAAA 57.850 28.000 0.00 0.00 46.17 1.94
823 827 7.769220 TGGCAACATTTGATTTTCACAAAAAT 58.231 26.923 0.00 0.00 44.22 1.82
837 841 9.290988 TTTTCACAAAAATCTATAGGCACTACA 57.709 29.630 0.00 0.00 34.88 2.74
855 859 5.832539 CTACATTATGGAATGGAGGGAGT 57.167 43.478 2.44 0.00 46.58 3.85
856 860 6.935240 CTACATTATGGAATGGAGGGAGTA 57.065 41.667 2.44 0.00 46.58 2.59
857 861 5.832539 ACATTATGGAATGGAGGGAGTAG 57.167 43.478 0.00 0.00 45.83 2.57
858 862 5.227593 ACATTATGGAATGGAGGGAGTAGT 58.772 41.667 0.00 0.00 45.83 2.73
859 863 6.390504 ACATTATGGAATGGAGGGAGTAGTA 58.609 40.000 0.00 0.00 45.83 1.82
860 864 6.849697 ACATTATGGAATGGAGGGAGTAGTAA 59.150 38.462 0.00 0.00 45.83 2.24
861 865 7.349859 ACATTATGGAATGGAGGGAGTAGTAAA 59.650 37.037 0.00 0.00 45.83 2.01
862 866 5.896073 ATGGAATGGAGGGAGTAGTAAAG 57.104 43.478 0.00 0.00 0.00 1.85
863 867 4.955335 TGGAATGGAGGGAGTAGTAAAGA 58.045 43.478 0.00 0.00 0.00 2.52
864 868 5.347124 TGGAATGGAGGGAGTAGTAAAGAA 58.653 41.667 0.00 0.00 0.00 2.52
865 869 5.788533 TGGAATGGAGGGAGTAGTAAAGAAA 59.211 40.000 0.00 0.00 0.00 2.52
866 870 6.273730 TGGAATGGAGGGAGTAGTAAAGAAAA 59.726 38.462 0.00 0.00 0.00 2.29
867 871 7.036863 TGGAATGGAGGGAGTAGTAAAGAAAAT 60.037 37.037 0.00 0.00 0.00 1.82
868 872 8.491958 GGAATGGAGGGAGTAGTAAAGAAAATA 58.508 37.037 0.00 0.00 0.00 1.40
871 875 9.907229 ATGGAGGGAGTAGTAAAGAAAATAAAG 57.093 33.333 0.00 0.00 0.00 1.85
891 895 6.435292 AAAGGAGTACACCAATAACTCTGT 57.565 37.500 12.17 0.00 39.65 3.41
935 939 1.378250 GCTGCAAGTGGGATGAGCT 60.378 57.895 0.00 0.00 35.30 4.09
936 940 1.375098 GCTGCAAGTGGGATGAGCTC 61.375 60.000 6.82 6.82 35.30 4.09
971 975 3.007635 CCACAAACTCGGTCTAAATCCC 58.992 50.000 0.00 0.00 0.00 3.85
974 978 3.007635 CAAACTCGGTCTAAATCCCCAC 58.992 50.000 0.00 0.00 0.00 4.61
1326 1343 0.320421 TTTTTCCTCGGCGTCTCCTG 60.320 55.000 6.85 0.00 0.00 3.86
1369 1386 2.202797 CCCGAGCTGTCACCATCG 60.203 66.667 0.00 0.00 35.02 3.84
1493 1531 3.647649 CTGCCGATGCTGACGACCA 62.648 63.158 0.00 0.00 38.61 4.02
1983 2072 5.127031 AGAAGCAAACTAAACACCACATTGT 59.873 36.000 0.00 0.00 0.00 2.71
2125 2214 3.008049 AGAGCGAGAACTAACAAACCCAT 59.992 43.478 0.00 0.00 0.00 4.00
2132 2221 6.254281 AGAACTAACAAACCCATGATTTCG 57.746 37.500 0.00 0.00 0.00 3.46
2205 2310 1.092348 GATAAGACCCGGTTTGGTGC 58.908 55.000 0.00 0.00 39.24 5.01
2288 2617 7.770366 TCCAGCATCAGCAATATCAAATAAT 57.230 32.000 0.00 0.00 45.49 1.28
2290 2619 8.085909 TCCAGCATCAGCAATATCAAATAATTG 58.914 33.333 0.00 0.00 45.49 2.32
2477 3872 7.386025 CACAAAATTCCCTTGAGAAGAATTTCC 59.614 37.037 15.66 0.00 45.03 3.13
3079 4513 3.705502 TCTCCAGAGAGCAGCCAC 58.294 61.111 0.00 0.00 40.22 5.01
3080 4514 2.183811 CTCCAGAGAGCAGCCACG 59.816 66.667 0.00 0.00 32.13 4.94
3187 4627 4.080695 AGCTTCAACTATCTGCCTCATGAA 60.081 41.667 0.00 0.00 0.00 2.57
3242 4683 3.368220 CCCAGAGGATTATCAGATCAGCG 60.368 52.174 0.00 0.00 33.47 5.18
3293 4734 5.521906 CGAAGGATTGATACCTGAGAAGA 57.478 43.478 0.00 0.00 37.85 2.87
3298 4739 1.794714 TGATACCTGAGAAGAGGGGC 58.205 55.000 0.00 0.00 37.45 5.80
3320 4761 4.326826 CCTTACTTTGATGGAGACTGCAA 58.673 43.478 0.00 0.00 0.00 4.08
3418 4871 0.605319 ATTTGTGTCGGGTGCACGAT 60.605 50.000 11.45 0.00 45.47 3.73
3430 4883 2.613595 GGTGCACGATATGATGCTTGAA 59.386 45.455 11.45 0.00 42.55 2.69
3527 4980 3.074369 TTCGCCGCCTCTCCATCA 61.074 61.111 0.00 0.00 0.00 3.07
3574 5030 5.280011 GGGAATACTCCACAACAGAGAAAGA 60.280 44.000 0.00 0.00 44.51 2.52
3620 5076 6.547141 TGAATGTTATTGAGGGGATGAACATC 59.453 38.462 6.28 6.28 36.71 3.06
3639 5095 3.052455 TCAAGCATGTACGGTCATTGT 57.948 42.857 0.00 0.00 0.00 2.71
3797 5253 5.540337 TCTTAAGTTCTTGAGCTTGAGAGGA 59.460 40.000 14.30 0.00 34.06 3.71
3836 5292 1.649664 CTCCAGAAATCTGCGACCTG 58.350 55.000 4.87 0.00 42.47 4.00
3852 5308 1.972795 ACCTGGAGCATTTGCAAACAT 59.027 42.857 15.41 2.94 45.16 2.71
4160 5622 5.657302 ACTAAGTAAGACATCATCCCTTCGT 59.343 40.000 0.00 0.00 0.00 3.85
4244 5712 1.005037 CACGCCACCACAGCTTCTA 60.005 57.895 0.00 0.00 0.00 2.10
4388 5856 1.559682 TGTAAGGCTCCCATCCTGAAC 59.440 52.381 0.00 0.00 33.43 3.18
4394 5862 1.141657 GCTCCCATCCTGAACAGCATA 59.858 52.381 0.00 0.00 0.00 3.14
4418 5886 9.730420 ATATTATTTCAGGTGCATTTTTACGTC 57.270 29.630 0.00 0.00 0.00 4.34
4430 5898 5.228635 GCATTTTTACGTCGACGAAGATCTA 59.771 40.000 41.52 20.93 43.02 1.98
4456 5924 1.896660 GGAGCGCCCACAAGTTTCA 60.897 57.895 2.29 0.00 34.14 2.69
4501 5969 5.357878 TGATAAATGCTGCTAAAACTCCCAG 59.642 40.000 0.00 0.00 0.00 4.45
4523 5991 6.095440 CCAGAGTTTTCAGTTTTGAGGAAGAA 59.905 38.462 0.00 0.00 34.15 2.52
4560 6028 6.531503 TCGAGATACTTGAATTGGACTTCT 57.468 37.500 0.00 0.00 0.00 2.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
3 4 5.023452 TCAACTCCTTTAGGTCTATGCAGA 58.977 41.667 0.00 0.00 36.34 4.26
7 8 6.516860 CGGGTATCAACTCCTTTAGGTCTATG 60.517 46.154 0.00 0.00 36.34 2.23
9 10 4.891756 CGGGTATCAACTCCTTTAGGTCTA 59.108 45.833 0.00 0.00 36.34 2.59
22 23 7.110155 ACCCAATATCAATATCGGGTATCAAC 58.890 38.462 9.51 0.00 45.13 3.18
38 39 8.041323 AGACATGTAATCCGAATACCCAATATC 58.959 37.037 0.00 0.00 0.00 1.63
75 76 0.931702 CGGGCGTGCGTATAAAATGA 59.068 50.000 0.00 0.00 0.00 2.57
139 140 8.863049 CAAATAATCAATGCACTCCACTTTAAC 58.137 33.333 0.00 0.00 0.00 2.01
150 151 9.142515 TGTGATTTTCTCAAATAATCAATGCAC 57.857 29.630 0.00 0.00 39.29 4.57
174 175 8.752193 AAAGGTGTCGCTAAGTTTACAACTTGT 61.752 37.037 11.38 0.00 46.36 3.16
188 189 4.274602 TGACCAATTAAAGGTGTCGCTA 57.725 40.909 7.61 0.00 40.09 4.26
192 193 7.136289 TCGTTTATGACCAATTAAAGGTGTC 57.864 36.000 7.61 0.28 40.09 3.67
211 212 9.106070 GACCATGACTAATTTAAGGTATCGTTT 57.894 33.333 0.00 0.00 0.00 3.60
214 215 8.657074 TTGACCATGACTAATTTAAGGTATCG 57.343 34.615 0.00 0.00 0.00 2.92
250 254 1.135721 GTTCATCCCCTTTGCTGATGC 59.864 52.381 0.00 0.00 36.64 3.91
254 258 1.467920 GGAGTTCATCCCCTTTGCTG 58.532 55.000 0.00 0.00 43.01 4.41
255 259 3.987594 GGAGTTCATCCCCTTTGCT 57.012 52.632 0.00 0.00 43.01 3.91
281 285 1.527433 GAACCAAACAGGGCCTGAGC 61.527 60.000 38.99 15.24 43.89 4.26
282 286 0.178992 TGAACCAAACAGGGCCTGAG 60.179 55.000 38.99 25.46 43.89 3.35
284 288 2.214376 TATGAACCAAACAGGGCCTG 57.786 50.000 31.62 31.62 43.89 4.85
287 291 2.492088 GGACTTATGAACCAAACAGGGC 59.508 50.000 0.00 0.00 43.89 5.19
288 292 4.034285 AGGACTTATGAACCAAACAGGG 57.966 45.455 0.00 0.00 43.89 4.45
289 293 5.045869 TCCTAGGACTTATGAACCAAACAGG 60.046 44.000 7.62 0.00 45.67 4.00
290 294 5.875359 GTCCTAGGACTTATGAACCAAACAG 59.125 44.000 31.12 0.00 41.57 3.16
291 295 5.801380 GTCCTAGGACTTATGAACCAAACA 58.199 41.667 31.12 0.00 41.57 2.83
313 317 8.818622 ACTTTTTAGTTGGGACTAGAAAAAGT 57.181 30.769 18.18 18.18 46.80 2.66
314 318 8.350722 GGACTTTTTAGTTGGGACTAGAAAAAG 58.649 37.037 17.36 17.36 45.76 2.27
315 319 8.057011 AGGACTTTTTAGTTGGGACTAGAAAAA 58.943 33.333 0.00 0.00 40.10 1.94
316 320 7.580007 AGGACTTTTTAGTTGGGACTAGAAAA 58.420 34.615 0.00 5.68 40.10 2.29
317 321 7.145474 AGGACTTTTTAGTTGGGACTAGAAA 57.855 36.000 0.00 3.34 39.04 2.52
318 322 6.758806 AGGACTTTTTAGTTGGGACTAGAA 57.241 37.500 0.00 0.00 39.43 2.10
319 323 6.758806 AAGGACTTTTTAGTTGGGACTAGA 57.241 37.500 0.00 0.00 39.43 2.43
320 324 7.677892 ACTAAGGACTTTTTAGTTGGGACTAG 58.322 38.462 0.00 0.00 37.95 2.57
321 325 7.256439 GGACTAAGGACTTTTTAGTTGGGACTA 60.256 40.741 0.00 0.00 40.46 2.59
322 326 6.465464 GGACTAAGGACTTTTTAGTTGGGACT 60.465 42.308 0.00 0.00 40.46 3.85
323 327 5.704515 GGACTAAGGACTTTTTAGTTGGGAC 59.295 44.000 0.00 0.00 40.46 4.46
324 328 5.221986 GGGACTAAGGACTTTTTAGTTGGGA 60.222 44.000 0.00 0.00 40.46 4.37
325 329 5.008331 GGGACTAAGGACTTTTTAGTTGGG 58.992 45.833 0.00 0.00 40.46 4.12
326 330 5.877491 AGGGACTAAGGACTTTTTAGTTGG 58.123 41.667 0.00 0.00 40.46 3.77
334 338 8.585333 AGGGACTTTTTAGGGACTAAGGACTTT 61.585 40.741 0.00 0.00 45.97 2.66
335 339 7.160878 AGGGACTTTTTAGGGACTAAGGACTT 61.161 42.308 0.00 0.00 45.97 3.01
336 340 5.701564 AGGGACTTTTTAGGGACTAAGGACT 60.702 44.000 0.00 0.00 45.97 3.85
337 341 4.535294 AGGGACTTTTTAGGGACTAAGGAC 59.465 45.833 0.00 0.00 45.97 3.85
338 342 4.771338 AGGGACTTTTTAGGGACTAAGGA 58.229 43.478 0.00 0.00 45.97 3.36
341 345 3.848377 GGGAGGGACTTTTTAGGGACTAA 59.152 47.826 0.00 0.00 45.97 2.24
342 346 3.080153 AGGGAGGGACTTTTTAGGGACTA 59.920 47.826 0.00 0.00 41.55 2.59
343 347 2.157833 AGGGAGGGACTTTTTAGGGACT 60.158 50.000 0.00 0.00 41.55 3.85
344 348 2.026169 CAGGGAGGGACTTTTTAGGGAC 60.026 54.545 0.00 0.00 41.55 4.46
345 349 2.275466 CAGGGAGGGACTTTTTAGGGA 58.725 52.381 0.00 0.00 41.55 4.20
346 350 1.993301 ACAGGGAGGGACTTTTTAGGG 59.007 52.381 0.00 0.00 41.55 3.53
347 351 3.808834 AACAGGGAGGGACTTTTTAGG 57.191 47.619 0.00 0.00 41.55 2.69
348 352 4.470602 ACAAACAGGGAGGGACTTTTTAG 58.529 43.478 0.00 0.00 41.55 1.85
349 353 4.529716 ACAAACAGGGAGGGACTTTTTA 57.470 40.909 0.00 0.00 41.55 1.52
350 354 3.398318 ACAAACAGGGAGGGACTTTTT 57.602 42.857 0.00 0.00 41.55 1.94
351 355 3.398318 AACAAACAGGGAGGGACTTTT 57.602 42.857 0.00 0.00 41.55 2.27
352 356 3.296854 GAAACAAACAGGGAGGGACTTT 58.703 45.455 0.00 0.00 41.55 2.66
353 357 2.424379 GGAAACAAACAGGGAGGGACTT 60.424 50.000 0.00 0.00 41.55 3.01
354 358 3.504636 TGGAAACAAACAGGGAGGGACT 61.505 50.000 0.00 0.00 39.11 3.85
355 359 1.133606 TGGAAACAAACAGGGAGGGAC 60.134 52.381 0.00 0.00 37.44 4.46
356 360 1.144913 CTGGAAACAAACAGGGAGGGA 59.855 52.381 0.00 0.00 42.06 4.20
357 361 1.144913 TCTGGAAACAAACAGGGAGGG 59.855 52.381 0.00 0.00 42.06 4.30
358 362 2.106511 TCTCTGGAAACAAACAGGGAGG 59.893 50.000 0.00 0.00 39.19 4.30
359 363 3.142174 GTCTCTGGAAACAAACAGGGAG 58.858 50.000 0.00 0.00 44.32 4.30
360 364 2.777692 AGTCTCTGGAAACAAACAGGGA 59.222 45.455 0.00 0.00 41.67 4.20
361 365 3.214696 AGTCTCTGGAAACAAACAGGG 57.785 47.619 0.00 0.00 42.06 4.45
362 366 6.693315 TTTTAGTCTCTGGAAACAAACAGG 57.307 37.500 0.00 0.00 42.06 4.00
363 367 7.762382 ACTTTTTAGTCTCTGGAAACAAACAG 58.238 34.615 0.00 0.00 42.06 3.16
364 368 7.148137 GGACTTTTTAGTCTCTGGAAACAAACA 60.148 37.037 5.40 0.00 38.28 2.83
365 369 7.194278 GGACTTTTTAGTCTCTGGAAACAAAC 58.806 38.462 5.40 0.00 38.28 2.93
366 370 6.320418 GGGACTTTTTAGTCTCTGGAAACAAA 59.680 38.462 5.40 0.00 38.28 2.83
367 371 5.826208 GGGACTTTTTAGTCTCTGGAAACAA 59.174 40.000 5.40 0.00 38.28 2.83
368 372 5.132144 AGGGACTTTTTAGTCTCTGGAAACA 59.868 40.000 6.89 0.00 46.88 2.83
369 373 5.622180 AGGGACTTTTTAGTCTCTGGAAAC 58.378 41.667 6.89 0.00 46.88 2.78
370 374 5.906772 AGGGACTTTTTAGTCTCTGGAAA 57.093 39.130 6.89 0.00 46.88 3.13
371 375 6.082707 ACTAGGGACTTTTTAGTCTCTGGAA 58.917 40.000 20.87 1.77 46.69 3.53
372 376 5.652324 ACTAGGGACTTTTTAGTCTCTGGA 58.348 41.667 20.87 2.39 46.69 3.86
376 380 5.024785 AGGGACTAGGGACTTTTTAGTCTC 58.975 45.833 9.84 6.72 42.56 3.36
377 381 5.026093 AGGGACTAGGGACTTTTTAGTCT 57.974 43.478 9.84 0.00 41.77 3.24
378 382 5.338219 GGAAGGGACTAGGGACTTTTTAGTC 60.338 48.000 0.00 3.01 38.49 2.59
379 383 4.535294 GGAAGGGACTAGGGACTTTTTAGT 59.465 45.833 0.00 0.00 38.49 2.24
380 384 4.783763 AGGAAGGGACTAGGGACTTTTTAG 59.216 45.833 0.00 0.00 38.49 1.85
381 385 4.771338 AGGAAGGGACTAGGGACTTTTTA 58.229 43.478 0.00 0.00 38.49 1.52
382 386 3.610260 AGGAAGGGACTAGGGACTTTTT 58.390 45.455 0.00 0.00 38.49 1.94
383 387 3.293215 AGGAAGGGACTAGGGACTTTT 57.707 47.619 0.00 0.00 38.49 2.27
384 388 3.601537 TCTAGGAAGGGACTAGGGACTTT 59.398 47.826 0.00 0.00 38.49 2.66
385 389 3.205733 CTCTAGGAAGGGACTAGGGACTT 59.794 52.174 0.00 0.00 40.69 3.01
386 390 2.787035 CTCTAGGAAGGGACTAGGGACT 59.213 54.545 0.00 0.00 40.69 3.85
387 391 2.158430 CCTCTAGGAAGGGACTAGGGAC 60.158 59.091 1.08 0.00 40.69 4.46
388 392 2.145298 CCTCTAGGAAGGGACTAGGGA 58.855 57.143 1.08 0.00 40.69 4.20
389 393 1.860906 ACCTCTAGGAAGGGACTAGGG 59.139 57.143 2.23 0.00 41.04 3.53
390 394 3.691698 AACCTCTAGGAAGGGACTAGG 57.308 52.381 2.23 0.00 41.04 3.02
391 395 8.779096 TTTAATAACCTCTAGGAAGGGACTAG 57.221 38.462 2.23 0.00 41.04 2.57
392 396 9.155785 CATTTAATAACCTCTAGGAAGGGACTA 57.844 37.037 2.23 0.00 41.04 2.59
393 397 7.849904 TCATTTAATAACCTCTAGGAAGGGACT 59.150 37.037 2.23 0.00 41.04 3.85
394 398 7.932491 GTCATTTAATAACCTCTAGGAAGGGAC 59.068 40.741 2.23 0.00 41.04 4.46
395 399 7.072076 GGTCATTTAATAACCTCTAGGAAGGGA 59.928 40.741 2.23 0.00 41.04 4.20
396 400 7.147373 TGGTCATTTAATAACCTCTAGGAAGGG 60.147 40.741 2.23 0.00 41.04 3.95
397 401 7.802117 TGGTCATTTAATAACCTCTAGGAAGG 58.198 38.462 2.23 0.00 42.55 3.46
398 402 9.277783 CATGGTCATTTAATAACCTCTAGGAAG 57.722 37.037 2.23 0.00 38.94 3.46
399 403 8.778059 ACATGGTCATTTAATAACCTCTAGGAA 58.222 33.333 2.23 0.00 38.94 3.36
400 404 8.331931 ACATGGTCATTTAATAACCTCTAGGA 57.668 34.615 2.23 0.00 38.94 2.94
401 405 8.840321 CAACATGGTCATTTAATAACCTCTAGG 58.160 37.037 0.00 0.00 42.17 3.02
402 406 8.345565 GCAACATGGTCATTTAATAACCTCTAG 58.654 37.037 0.00 0.00 34.05 2.43
403 407 7.284489 GGCAACATGGTCATTTAATAACCTCTA 59.716 37.037 0.00 0.00 34.05 2.43
404 408 6.096846 GGCAACATGGTCATTTAATAACCTCT 59.903 38.462 0.00 0.00 34.05 3.69
405 409 6.273071 GGCAACATGGTCATTTAATAACCTC 58.727 40.000 0.00 0.00 34.05 3.85
406 410 5.128663 GGGCAACATGGTCATTTAATAACCT 59.871 40.000 0.00 0.00 39.74 3.50
407 411 5.356426 GGGCAACATGGTCATTTAATAACC 58.644 41.667 0.00 0.00 39.74 2.85
408 412 5.128663 AGGGGCAACATGGTCATTTAATAAC 59.871 40.000 0.00 0.00 39.74 1.89
409 413 5.276440 AGGGGCAACATGGTCATTTAATAA 58.724 37.500 0.00 0.00 39.74 1.40
410 414 4.877773 AGGGGCAACATGGTCATTTAATA 58.122 39.130 0.00 0.00 39.74 0.98
411 415 3.723325 AGGGGCAACATGGTCATTTAAT 58.277 40.909 0.00 0.00 39.74 1.40
412 416 3.182887 AGGGGCAACATGGTCATTTAA 57.817 42.857 0.00 0.00 39.74 1.52
413 417 2.917713 AGGGGCAACATGGTCATTTA 57.082 45.000 0.00 0.00 39.74 1.40
414 418 2.042979 ACTAGGGGCAACATGGTCATTT 59.957 45.455 0.00 0.00 39.74 2.32
415 419 1.640670 ACTAGGGGCAACATGGTCATT 59.359 47.619 0.00 0.00 39.74 2.57
416 420 1.298953 ACTAGGGGCAACATGGTCAT 58.701 50.000 0.00 0.00 39.74 3.06
417 421 1.959710 TACTAGGGGCAACATGGTCA 58.040 50.000 0.00 0.00 39.74 4.02
418 422 4.910458 ATATACTAGGGGCAACATGGTC 57.090 45.455 0.00 0.00 39.74 4.02
419 423 5.661565 TCTATATACTAGGGGCAACATGGT 58.338 41.667 0.00 0.00 39.74 3.55
420 424 6.620877 TTCTATATACTAGGGGCAACATGG 57.379 41.667 0.00 0.00 39.74 3.66
421 425 8.918202 TTTTTCTATATACTAGGGGCAACATG 57.082 34.615 0.00 0.00 39.74 3.21
440 444 9.612066 ATGGTGTTGTTTGATTGTTATTTTTCT 57.388 25.926 0.00 0.00 0.00 2.52
443 447 9.487790 CCTATGGTGTTGTTTGATTGTTATTTT 57.512 29.630 0.00 0.00 0.00 1.82
444 448 8.093927 CCCTATGGTGTTGTTTGATTGTTATTT 58.906 33.333 0.00 0.00 0.00 1.40
445 449 7.234577 ACCCTATGGTGTTGTTTGATTGTTATT 59.765 33.333 0.00 0.00 45.58 1.40
446 450 6.723977 ACCCTATGGTGTTGTTTGATTGTTAT 59.276 34.615 0.00 0.00 45.58 1.89
447 451 6.071984 ACCCTATGGTGTTGTTTGATTGTTA 58.928 36.000 0.00 0.00 45.58 2.41
448 452 4.898861 ACCCTATGGTGTTGTTTGATTGTT 59.101 37.500 0.00 0.00 45.58 2.83
449 453 4.479158 ACCCTATGGTGTTGTTTGATTGT 58.521 39.130 0.00 0.00 45.58 2.71
473 477 3.228759 ATGCATCCATTGGCCCGC 61.229 61.111 0.00 0.90 0.00 6.13
474 478 2.732016 CATGCATCCATTGGCCCG 59.268 61.111 0.00 0.00 0.00 6.13
475 479 1.458020 TCCATGCATCCATTGGCCC 60.458 57.895 0.00 0.00 0.00 5.80
476 480 1.469335 CCTCCATGCATCCATTGGCC 61.469 60.000 0.00 0.00 0.00 5.36
477 481 1.469335 CCCTCCATGCATCCATTGGC 61.469 60.000 0.00 0.00 0.00 4.52
478 482 0.830444 CCCCTCCATGCATCCATTGG 60.830 60.000 0.00 0.00 0.00 3.16
479 483 1.469335 GCCCCTCCATGCATCCATTG 61.469 60.000 0.00 0.00 0.00 2.82
480 484 1.152398 GCCCCTCCATGCATCCATT 60.152 57.895 0.00 0.00 0.00 3.16
481 485 1.736491 ATGCCCCTCCATGCATCCAT 61.736 55.000 0.00 0.00 44.58 3.41
482 486 1.951923 AATGCCCCTCCATGCATCCA 61.952 55.000 0.00 0.00 46.97 3.41
483 487 1.152398 AATGCCCCTCCATGCATCC 60.152 57.895 0.00 0.00 46.97 3.51
484 488 0.757935 ACAATGCCCCTCCATGCATC 60.758 55.000 0.00 0.00 46.97 3.91
486 490 1.078891 AACAATGCCCCTCCATGCA 59.921 52.632 0.00 0.00 42.52 3.96
487 491 1.518774 CAACAATGCCCCTCCATGC 59.481 57.895 0.00 0.00 0.00 4.06
488 492 0.324552 TCCAACAATGCCCCTCCATG 60.325 55.000 0.00 0.00 0.00 3.66
489 493 0.413037 TTCCAACAATGCCCCTCCAT 59.587 50.000 0.00 0.00 0.00 3.41
490 494 0.189574 TTTCCAACAATGCCCCTCCA 59.810 50.000 0.00 0.00 0.00 3.86
491 495 1.276138 CTTTTCCAACAATGCCCCTCC 59.724 52.381 0.00 0.00 0.00 4.30
492 496 1.970640 ACTTTTCCAACAATGCCCCTC 59.029 47.619 0.00 0.00 0.00 4.30
493 497 1.970640 GACTTTTCCAACAATGCCCCT 59.029 47.619 0.00 0.00 0.00 4.79
494 498 1.001974 GGACTTTTCCAACAATGCCCC 59.998 52.381 0.00 0.00 42.30 5.80
495 499 1.001974 GGGACTTTTCCAACAATGCCC 59.998 52.381 0.00 0.00 44.98 5.36
496 500 1.691434 TGGGACTTTTCCAACAATGCC 59.309 47.619 0.00 0.00 44.98 4.40
497 501 3.467374 TTGGGACTTTTCCAACAATGC 57.533 42.857 0.00 0.00 44.98 3.56
526 530 6.678568 AAATGAAGAAGACTCTCAAGGAGA 57.321 37.500 0.00 0.00 44.45 3.71
527 531 7.610865 ACTAAATGAAGAAGACTCTCAAGGAG 58.389 38.462 0.00 0.00 46.87 3.69
528 532 7.310113 GGACTAAATGAAGAAGACTCTCAAGGA 60.310 40.741 0.00 0.00 0.00 3.36
529 533 6.816140 GGACTAAATGAAGAAGACTCTCAAGG 59.184 42.308 0.00 0.00 0.00 3.61
530 534 6.816140 GGGACTAAATGAAGAAGACTCTCAAG 59.184 42.308 0.00 0.00 0.00 3.02
531 535 6.270000 TGGGACTAAATGAAGAAGACTCTCAA 59.730 38.462 0.00 0.00 0.00 3.02
532 536 5.780282 TGGGACTAAATGAAGAAGACTCTCA 59.220 40.000 0.00 0.00 0.00 3.27
533 537 6.287589 TGGGACTAAATGAAGAAGACTCTC 57.712 41.667 0.00 0.00 0.00 3.20
534 538 6.688073 TTGGGACTAAATGAAGAAGACTCT 57.312 37.500 0.00 0.00 0.00 3.24
535 539 7.627300 GCATTTGGGACTAAATGAAGAAGACTC 60.627 40.741 20.68 1.26 46.13 3.36
536 540 6.151817 GCATTTGGGACTAAATGAAGAAGACT 59.848 38.462 20.68 0.00 46.13 3.24
537 541 6.325596 GCATTTGGGACTAAATGAAGAAGAC 58.674 40.000 20.68 2.40 46.13 3.01
538 542 5.418840 GGCATTTGGGACTAAATGAAGAAGA 59.581 40.000 20.68 0.00 46.13 2.87
539 543 5.420104 AGGCATTTGGGACTAAATGAAGAAG 59.580 40.000 20.68 0.00 46.13 2.85
540 544 5.332743 AGGCATTTGGGACTAAATGAAGAA 58.667 37.500 20.68 0.00 46.13 2.52
541 545 4.934356 AGGCATTTGGGACTAAATGAAGA 58.066 39.130 20.68 0.00 46.13 2.87
542 546 6.773976 TTAGGCATTTGGGACTAAATGAAG 57.226 37.500 20.68 0.38 46.13 3.02
543 547 7.732222 AATTAGGCATTTGGGACTAAATGAA 57.268 32.000 20.68 9.64 46.13 2.57
544 548 7.732222 AAATTAGGCATTTGGGACTAAATGA 57.268 32.000 20.68 4.57 46.13 2.57
545 549 8.695456 ACTAAATTAGGCATTTGGGACTAAATG 58.305 33.333 14.45 14.45 41.50 2.32
546 550 8.838649 ACTAAATTAGGCATTTGGGACTAAAT 57.161 30.769 4.92 0.00 41.50 1.40
547 551 8.658840 AACTAAATTAGGCATTTGGGACTAAA 57.341 30.769 4.92 0.00 41.50 1.85
548 552 7.340999 GGAACTAAATTAGGCATTTGGGACTAA 59.659 37.037 4.92 0.00 42.33 2.24
549 553 6.831868 GGAACTAAATTAGGCATTTGGGACTA 59.168 38.462 4.92 0.00 37.60 2.59
550 554 5.656859 GGAACTAAATTAGGCATTTGGGACT 59.343 40.000 4.92 0.00 37.60 3.85
551 555 5.656859 AGGAACTAAATTAGGCATTTGGGAC 59.343 40.000 4.92 0.00 37.60 4.46
552 556 5.837829 AGGAACTAAATTAGGCATTTGGGA 58.162 37.500 4.92 0.00 37.60 4.37
567 571 4.019950 CGGGAGGGACTTTTTAGGAACTAA 60.020 45.833 0.00 0.00 45.97 2.24
568 572 3.516700 CGGGAGGGACTTTTTAGGAACTA 59.483 47.826 0.00 0.00 41.55 2.24
569 573 2.305052 CGGGAGGGACTTTTTAGGAACT 59.695 50.000 0.00 0.00 41.55 3.01
570 574 2.039480 ACGGGAGGGACTTTTTAGGAAC 59.961 50.000 0.00 0.00 41.55 3.62
571 575 2.341695 ACGGGAGGGACTTTTTAGGAA 58.658 47.619 0.00 0.00 41.55 3.36
572 576 2.034436 ACGGGAGGGACTTTTTAGGA 57.966 50.000 0.00 0.00 41.55 2.94
573 577 2.817844 CAAACGGGAGGGACTTTTTAGG 59.182 50.000 0.00 0.00 41.55 2.69
574 578 2.817844 CCAAACGGGAGGGACTTTTTAG 59.182 50.000 0.00 0.00 41.55 1.85
575 579 2.175284 ACCAAACGGGAGGGACTTTTTA 59.825 45.455 0.00 0.00 41.55 1.52
576 580 1.063492 ACCAAACGGGAGGGACTTTTT 60.063 47.619 0.00 0.00 41.55 1.94
577 581 0.554305 ACCAAACGGGAGGGACTTTT 59.446 50.000 0.00 0.00 41.55 2.27
578 582 1.437397 TACCAAACGGGAGGGACTTT 58.563 50.000 0.00 0.00 41.55 2.66
579 583 1.437397 TTACCAAACGGGAGGGACTT 58.563 50.000 0.00 0.00 41.55 3.01
581 585 2.275134 TTTTACCAAACGGGAGGGAC 57.725 50.000 0.00 0.00 41.15 4.46
605 609 9.414295 GGACTAGAAAAAGTTTCTCTTAGAGAC 57.586 37.037 11.96 2.12 38.51 3.36
606 610 8.586744 GGGACTAGAAAAAGTTTCTCTTAGAGA 58.413 37.037 8.00 8.00 36.86 3.10
607 611 8.590204 AGGGACTAGAAAAAGTTTCTCTTAGAG 58.410 37.037 2.23 2.23 36.02 2.43
608 612 8.493787 AGGGACTAGAAAAAGTTTCTCTTAGA 57.506 34.615 6.51 0.00 36.02 2.10
639 643 3.129813 GTGTTCGTTTCCAGGGACTTTTT 59.870 43.478 0.00 0.00 34.60 1.94
640 644 2.686405 GTGTTCGTTTCCAGGGACTTTT 59.314 45.455 0.00 0.00 34.60 2.27
641 645 2.294979 GTGTTCGTTTCCAGGGACTTT 58.705 47.619 0.00 0.00 34.60 2.66
642 646 1.476291 GGTGTTCGTTTCCAGGGACTT 60.476 52.381 0.00 0.00 34.60 3.01
643 647 0.108019 GGTGTTCGTTTCCAGGGACT 59.892 55.000 0.00 0.00 43.88 3.85
644 648 0.887836 GGGTGTTCGTTTCCAGGGAC 60.888 60.000 0.00 0.00 0.00 4.46
645 649 1.452801 GGGTGTTCGTTTCCAGGGA 59.547 57.895 0.00 0.00 0.00 4.20
646 650 1.602605 GGGGTGTTCGTTTCCAGGG 60.603 63.158 0.00 0.00 0.00 4.45
647 651 1.602605 GGGGGTGTTCGTTTCCAGG 60.603 63.158 0.00 0.00 0.00 4.45
648 652 0.605589 GAGGGGGTGTTCGTTTCCAG 60.606 60.000 0.00 0.00 0.00 3.86
649 653 1.346479 TGAGGGGGTGTTCGTTTCCA 61.346 55.000 0.00 0.00 0.00 3.53
650 654 0.605589 CTGAGGGGGTGTTCGTTTCC 60.606 60.000 0.00 0.00 0.00 3.13
651 655 0.108019 ACTGAGGGGGTGTTCGTTTC 59.892 55.000 0.00 0.00 0.00 2.78
652 656 0.108019 GACTGAGGGGGTGTTCGTTT 59.892 55.000 0.00 0.00 0.00 3.60
653 657 0.763223 AGACTGAGGGGGTGTTCGTT 60.763 55.000 0.00 0.00 0.00 3.85
654 658 0.763223 AAGACTGAGGGGGTGTTCGT 60.763 55.000 0.00 0.00 0.00 3.85
655 659 0.037232 GAAGACTGAGGGGGTGTTCG 60.037 60.000 0.00 0.00 29.82 3.95
656 660 1.353091 AGAAGACTGAGGGGGTGTTC 58.647 55.000 0.00 0.00 37.27 3.18
657 661 2.715763 TAGAAGACTGAGGGGGTGTT 57.284 50.000 0.00 0.00 0.00 3.32
658 662 2.044492 TCATAGAAGACTGAGGGGGTGT 59.956 50.000 0.00 0.00 0.00 4.16
659 663 2.697751 CTCATAGAAGACTGAGGGGGTG 59.302 54.545 0.00 0.00 36.15 4.61
660 664 2.316372 ACTCATAGAAGACTGAGGGGGT 59.684 50.000 4.74 0.00 42.56 4.95
661 665 2.697751 CACTCATAGAAGACTGAGGGGG 59.302 54.545 4.74 0.00 42.56 5.40
662 666 3.636300 CTCACTCATAGAAGACTGAGGGG 59.364 52.174 2.27 0.00 42.11 4.79
663 667 4.531854 TCTCACTCATAGAAGACTGAGGG 58.468 47.826 4.74 0.31 42.99 4.30
664 668 4.580167 CCTCTCACTCATAGAAGACTGAGG 59.420 50.000 4.74 0.00 42.56 3.86
665 669 4.580167 CCCTCTCACTCATAGAAGACTGAG 59.420 50.000 0.00 0.00 43.62 3.35
666 670 4.531854 CCCTCTCACTCATAGAAGACTGA 58.468 47.826 0.00 0.00 0.00 3.41
667 671 3.636300 CCCCTCTCACTCATAGAAGACTG 59.364 52.174 0.00 0.00 0.00 3.51
668 672 3.373658 CCCCCTCTCACTCATAGAAGACT 60.374 52.174 0.00 0.00 0.00 3.24
669 673 2.962421 CCCCCTCTCACTCATAGAAGAC 59.038 54.545 0.00 0.00 0.00 3.01
670 674 3.320610 CCCCCTCTCACTCATAGAAGA 57.679 52.381 0.00 0.00 0.00 2.87
695 699 4.628963 TGGAGTAAAACTAGTGAACCCC 57.371 45.455 0.00 0.00 0.00 4.95
696 700 9.895138 TTATATTGGAGTAAAACTAGTGAACCC 57.105 33.333 0.00 0.49 0.00 4.11
754 758 9.125026 AGAGAAAACTGTGTTGATAAATGTCTT 57.875 29.630 0.00 0.00 0.00 3.01
755 759 8.682936 AGAGAAAACTGTGTTGATAAATGTCT 57.317 30.769 0.00 0.00 0.00 3.41
763 767 8.993121 CAAGTGTATAGAGAAAACTGTGTTGAT 58.007 33.333 0.00 0.00 0.00 2.57
764 768 7.441157 CCAAGTGTATAGAGAAAACTGTGTTGA 59.559 37.037 0.00 0.00 0.00 3.18
765 769 7.226720 ACCAAGTGTATAGAGAAAACTGTGTTG 59.773 37.037 0.00 0.00 0.00 3.33
766 770 7.280356 ACCAAGTGTATAGAGAAAACTGTGTT 58.720 34.615 0.00 0.00 0.00 3.32
767 771 6.827727 ACCAAGTGTATAGAGAAAACTGTGT 58.172 36.000 0.00 0.00 0.00 3.72
768 772 6.929049 TGACCAAGTGTATAGAGAAAACTGTG 59.071 38.462 0.00 0.00 0.00 3.66
769 773 7.062749 TGACCAAGTGTATAGAGAAAACTGT 57.937 36.000 0.00 0.00 0.00 3.55
770 774 7.962964 TTGACCAAGTGTATAGAGAAAACTG 57.037 36.000 0.00 0.00 0.00 3.16
771 775 8.974060 TTTTGACCAAGTGTATAGAGAAAACT 57.026 30.769 0.00 0.00 0.00 2.66
774 778 8.792633 CCAATTTTGACCAAGTGTATAGAGAAA 58.207 33.333 0.00 0.00 0.00 2.52
775 779 7.094377 GCCAATTTTGACCAAGTGTATAGAGAA 60.094 37.037 0.00 0.00 0.00 2.87
776 780 6.374333 GCCAATTTTGACCAAGTGTATAGAGA 59.626 38.462 0.00 0.00 0.00 3.10
777 781 6.150976 TGCCAATTTTGACCAAGTGTATAGAG 59.849 38.462 0.00 0.00 0.00 2.43
778 782 6.007076 TGCCAATTTTGACCAAGTGTATAGA 58.993 36.000 0.00 0.00 0.00 1.98
779 783 6.266168 TGCCAATTTTGACCAAGTGTATAG 57.734 37.500 0.00 0.00 0.00 1.31
780 784 6.040955 TGTTGCCAATTTTGACCAAGTGTATA 59.959 34.615 0.00 0.00 0.00 1.47
781 785 5.163364 TGTTGCCAATTTTGACCAAGTGTAT 60.163 36.000 0.00 0.00 0.00 2.29
782 786 4.160439 TGTTGCCAATTTTGACCAAGTGTA 59.840 37.500 0.00 0.00 0.00 2.90
783 787 3.055530 TGTTGCCAATTTTGACCAAGTGT 60.056 39.130 0.00 0.00 0.00 3.55
784 788 3.529533 TGTTGCCAATTTTGACCAAGTG 58.470 40.909 0.00 0.00 0.00 3.16
785 789 3.902881 TGTTGCCAATTTTGACCAAGT 57.097 38.095 0.00 0.00 0.00 3.16
786 790 5.296283 TCAAATGTTGCCAATTTTGACCAAG 59.704 36.000 11.98 0.00 34.20 3.61
787 791 5.188434 TCAAATGTTGCCAATTTTGACCAA 58.812 33.333 11.98 0.00 34.20 3.67
788 792 4.774124 TCAAATGTTGCCAATTTTGACCA 58.226 34.783 11.98 0.00 34.20 4.02
789 793 5.945466 ATCAAATGTTGCCAATTTTGACC 57.055 34.783 16.07 0.00 39.94 4.02
790 794 7.914346 TGAAAATCAAATGTTGCCAATTTTGAC 59.086 29.630 16.07 8.08 39.94 3.18
791 795 7.914346 GTGAAAATCAAATGTTGCCAATTTTGA 59.086 29.630 16.07 16.07 40.99 2.69
792 796 7.701078 TGTGAAAATCAAATGTTGCCAATTTTG 59.299 29.630 8.64 8.64 29.89 2.44
793 797 7.769220 TGTGAAAATCAAATGTTGCCAATTTT 58.231 26.923 0.00 0.00 31.39 1.82
794 798 7.330900 TGTGAAAATCAAATGTTGCCAATTT 57.669 28.000 0.00 0.00 0.00 1.82
795 799 6.939132 TGTGAAAATCAAATGTTGCCAATT 57.061 29.167 0.00 0.00 0.00 2.32
796 800 6.939132 TTGTGAAAATCAAATGTTGCCAAT 57.061 29.167 0.00 0.00 0.00 3.16
797 801 6.748333 TTTGTGAAAATCAAATGTTGCCAA 57.252 29.167 0.00 0.00 31.17 4.52
798 802 6.748333 TTTTGTGAAAATCAAATGTTGCCA 57.252 29.167 0.00 0.00 35.25 4.92
811 815 9.290988 TGTAGTGCCTATAGATTTTTGTGAAAA 57.709 29.630 0.00 0.00 38.96 2.29
812 816 8.856153 TGTAGTGCCTATAGATTTTTGTGAAA 57.144 30.769 0.00 0.00 0.00 2.69
813 817 9.461312 AATGTAGTGCCTATAGATTTTTGTGAA 57.539 29.630 0.00 0.00 0.00 3.18
821 825 9.896645 CATTCCATAATGTAGTGCCTATAGATT 57.103 33.333 0.00 0.00 38.15 2.40
822 826 8.489489 CCATTCCATAATGTAGTGCCTATAGAT 58.511 37.037 0.00 0.00 40.84 1.98
823 827 7.678171 TCCATTCCATAATGTAGTGCCTATAGA 59.322 37.037 0.00 0.00 40.84 1.98
824 828 7.851228 TCCATTCCATAATGTAGTGCCTATAG 58.149 38.462 0.00 0.00 40.84 1.31
825 829 7.092891 CCTCCATTCCATAATGTAGTGCCTATA 60.093 40.741 0.00 0.00 40.84 1.31
826 830 6.296662 CCTCCATTCCATAATGTAGTGCCTAT 60.297 42.308 0.00 0.00 40.84 2.57
827 831 5.013079 CCTCCATTCCATAATGTAGTGCCTA 59.987 44.000 0.00 0.00 40.84 3.93
828 832 4.202503 CCTCCATTCCATAATGTAGTGCCT 60.203 45.833 0.00 0.00 40.84 4.75
829 833 4.074970 CCTCCATTCCATAATGTAGTGCC 58.925 47.826 0.00 0.00 40.84 5.01
830 834 4.074970 CCCTCCATTCCATAATGTAGTGC 58.925 47.826 0.00 0.00 40.84 4.40
831 835 5.072329 ACTCCCTCCATTCCATAATGTAGTG 59.928 44.000 0.00 0.00 40.84 2.74
832 836 5.227593 ACTCCCTCCATTCCATAATGTAGT 58.772 41.667 0.00 0.00 40.84 2.73
833 837 5.832539 ACTCCCTCCATTCCATAATGTAG 57.167 43.478 0.00 0.00 40.84 2.74
834 838 6.390504 ACTACTCCCTCCATTCCATAATGTA 58.609 40.000 0.00 0.00 40.84 2.29
835 839 5.227593 ACTACTCCCTCCATTCCATAATGT 58.772 41.667 0.00 0.00 40.84 2.71
836 840 5.832539 ACTACTCCCTCCATTCCATAATG 57.167 43.478 0.00 0.00 41.90 1.90
837 841 7.794683 TCTTTACTACTCCCTCCATTCCATAAT 59.205 37.037 0.00 0.00 0.00 1.28
838 842 7.136885 TCTTTACTACTCCCTCCATTCCATAA 58.863 38.462 0.00 0.00 0.00 1.90
839 843 6.689561 TCTTTACTACTCCCTCCATTCCATA 58.310 40.000 0.00 0.00 0.00 2.74
840 844 5.538877 TCTTTACTACTCCCTCCATTCCAT 58.461 41.667 0.00 0.00 0.00 3.41
841 845 4.955335 TCTTTACTACTCCCTCCATTCCA 58.045 43.478 0.00 0.00 0.00 3.53
842 846 5.952347 TTCTTTACTACTCCCTCCATTCC 57.048 43.478 0.00 0.00 0.00 3.01
843 847 9.901172 TTATTTTCTTTACTACTCCCTCCATTC 57.099 33.333 0.00 0.00 0.00 2.67
845 849 9.907229 CTTTATTTTCTTTACTACTCCCTCCAT 57.093 33.333 0.00 0.00 0.00 3.41
846 850 8.326529 CCTTTATTTTCTTTACTACTCCCTCCA 58.673 37.037 0.00 0.00 0.00 3.86
847 851 8.546322 TCCTTTATTTTCTTTACTACTCCCTCC 58.454 37.037 0.00 0.00 0.00 4.30
848 852 9.602568 CTCCTTTATTTTCTTTACTACTCCCTC 57.397 37.037 0.00 0.00 0.00 4.30
849 853 9.113797 ACTCCTTTATTTTCTTTACTACTCCCT 57.886 33.333 0.00 0.00 0.00 4.20
856 860 9.856162 TTGGTGTACTCCTTTATTTTCTTTACT 57.144 29.630 14.75 0.00 0.00 2.24
864 868 9.449719 CAGAGTTATTGGTGTACTCCTTTATTT 57.550 33.333 14.75 0.00 39.23 1.40
865 869 8.603304 ACAGAGTTATTGGTGTACTCCTTTATT 58.397 33.333 14.75 0.00 39.23 1.40
866 870 8.147244 ACAGAGTTATTGGTGTACTCCTTTAT 57.853 34.615 14.75 8.30 39.23 1.40
867 871 7.549147 ACAGAGTTATTGGTGTACTCCTTTA 57.451 36.000 14.75 4.36 39.23 1.85
868 872 6.435292 ACAGAGTTATTGGTGTACTCCTTT 57.565 37.500 14.75 5.24 39.23 3.11
871 875 6.313164 GCTAAACAGAGTTATTGGTGTACTCC 59.687 42.308 7.03 7.03 39.23 3.85
909 913 0.465287 CCCACTTGCAGCAAAGGTTT 59.535 50.000 19.77 0.00 0.00 3.27
950 954 3.007635 GGGATTTAGACCGAGTTTGTGG 58.992 50.000 0.00 0.00 0.00 4.17
971 975 1.819288 TCTCTCTTTCCGCTACTGTGG 59.181 52.381 0.00 0.00 44.86 4.17
974 978 2.357637 CCTCTCTCTCTTTCCGCTACTG 59.642 54.545 0.00 0.00 0.00 2.74
1326 1343 2.516225 GCCCTGATGTTACCGGCC 60.516 66.667 0.00 0.00 33.30 6.13
1493 1531 1.539065 GGATGCCGACGAACTGATCAT 60.539 52.381 0.00 0.00 0.00 2.45
1971 2060 8.908903 TGTAGAATTTTAGAACAATGTGGTGTT 58.091 29.630 0.00 0.00 44.38 3.32
1972 2061 8.458573 TGTAGAATTTTAGAACAATGTGGTGT 57.541 30.769 0.00 0.00 0.00 4.16
2125 2214 3.057596 GTGGCCAGTTCATTTCGAAATCA 60.058 43.478 20.31 5.20 34.69 2.57
2132 2221 1.340889 TGCAAGTGGCCAGTTCATTTC 59.659 47.619 23.37 10.26 43.89 2.17
2223 2328 6.750501 GGTCAAACCTTGTAAGTTTCAACTTC 59.249 38.462 8.22 2.44 40.77 3.01
2477 3872 1.732259 GGTGTAACAACCGCTGAGATG 59.268 52.381 0.00 0.00 39.98 2.90
3079 4513 3.724374 TCTACAAAGTGTTTCCCTCACG 58.276 45.455 0.00 0.00 40.28 4.35
3080 4514 5.305585 TGATCTACAAAGTGTTTCCCTCAC 58.694 41.667 0.00 0.00 36.22 3.51
3187 4627 1.527034 ACATCATGCAACGCTTGAGT 58.473 45.000 9.90 6.11 43.82 3.41
3242 4683 4.021192 CCATCTTCTCAAGAGCCTATCCTC 60.021 50.000 0.00 0.00 41.61 3.71
3293 4734 1.566231 CTCCATCAAAGTAAGGCCCCT 59.434 52.381 0.00 0.00 0.00 4.79
3298 4739 3.942829 TGCAGTCTCCATCAAAGTAAGG 58.057 45.455 0.00 0.00 0.00 2.69
3320 4761 3.777522 ACTAGCTCATTGAAGTAGGCCTT 59.222 43.478 12.58 0.00 35.59 4.35
3418 4871 7.071069 AGATACCATGACTTCAAGCATCATA 57.929 36.000 0.00 0.00 31.83 2.15
3430 4883 8.317679 GCCTCTATTGATTTAGATACCATGACT 58.682 37.037 0.00 0.00 0.00 3.41
3464 4917 4.510167 ACTGAATGCCTACCAAGCTAAT 57.490 40.909 0.00 0.00 0.00 1.73
3527 4980 2.599216 CCCCCTGCTTTGCATCATT 58.401 52.632 0.00 0.00 38.13 2.57
3549 5005 2.838202 TCTCTGTTGTGGAGTATTCCCC 59.162 50.000 1.20 0.00 43.33 4.81
3551 5007 5.639931 GTCTTTCTCTGTTGTGGAGTATTCC 59.360 44.000 0.00 0.00 44.31 3.01
3552 5008 6.146347 GTGTCTTTCTCTGTTGTGGAGTATTC 59.854 42.308 0.00 0.00 33.06 1.75
3554 5010 5.070446 TGTGTCTTTCTCTGTTGTGGAGTAT 59.930 40.000 0.00 0.00 33.06 2.12
3561 5017 3.885297 CCCATTGTGTCTTTCTCTGTTGT 59.115 43.478 0.00 0.00 0.00 3.32
3574 5030 1.272648 CCATTCCACTCCCCATTGTGT 60.273 52.381 0.00 0.00 32.76 3.72
3620 5076 2.095853 GGACAATGACCGTACATGCTTG 59.904 50.000 0.00 0.00 0.00 4.01
3639 5095 3.244735 TGTCCTTCGGAATGAAATGTGGA 60.245 43.478 0.00 0.00 35.79 4.02
3797 5253 2.039480 AGGCATGACACTGACATCTGTT 59.961 45.455 0.00 0.00 0.00 3.16
3836 5292 4.453136 ACATCAAATGTTTGCAAATGCTCC 59.547 37.500 16.21 2.28 41.63 4.70
3852 5308 6.078202 GAGGAGAGTATCATCGACATCAAA 57.922 41.667 0.00 0.00 37.82 2.69
4097 5559 6.477253 TCGTCTAATATCACTATCCTGCTCT 58.523 40.000 0.00 0.00 0.00 4.09
4160 5622 1.900351 CTCTCCCACATCGAGCCAA 59.100 57.895 0.00 0.00 0.00 4.52
4244 5712 1.002773 CCAGCAAACCTAAGGTACCGT 59.997 52.381 6.18 5.80 33.12 4.83
4388 5856 8.428186 AAAAATGCACCTGAAATAATATGCTG 57.572 30.769 0.00 0.00 34.18 4.41
4394 5862 6.745450 CGACGTAAAAATGCACCTGAAATAAT 59.255 34.615 0.00 0.00 0.00 1.28
4418 5886 1.840741 CGTGCAACTAGATCTTCGTCG 59.159 52.381 0.00 0.00 31.75 5.12
4501 5969 7.142021 GGATTCTTCCTCAAAACTGAAAACTC 58.858 38.462 0.00 0.00 39.14 3.01
4523 5991 3.834489 ATCTCGAGCTTTGTCATGGAT 57.166 42.857 7.81 0.00 0.00 3.41
4560 6028 0.841961 ATGCTCTTATGCCAGCCTCA 59.158 50.000 0.00 0.00 34.47 3.86


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.