Multiple sequence alignment - TraesCS4A01G451500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G451500 chr4A 100.000 3182 0 0 1 3182 716975673 716972492 0.000000e+00 5877.0
1 TraesCS4A01G451500 chr7D 91.601 1274 88 12 1338 2601 17338858 17340122 0.000000e+00 1742.0
2 TraesCS4A01G451500 chr7D 88.947 959 79 16 410 1349 17322928 17323878 0.000000e+00 1158.0
3 TraesCS4A01G451500 chr7D 80.937 1217 201 18 978 2177 537667834 537669036 0.000000e+00 933.0
4 TraesCS4A01G451500 chr7D 79.848 1320 227 26 1055 2349 537669045 537670350 0.000000e+00 928.0
5 TraesCS4A01G451500 chr7D 90.411 146 8 2 144 289 17322790 17322929 1.510000e-43 187.0
6 TraesCS4A01G451500 chr7B 80.807 1214 208 14 978 2177 580133684 580134886 0.000000e+00 928.0
7 TraesCS4A01G451500 chr7B 79.652 1322 229 23 1055 2349 580134895 580136203 0.000000e+00 915.0
8 TraesCS4A01G451500 chr7A 80.839 1216 204 16 978 2177 618676349 618677551 0.000000e+00 928.0
9 TraesCS4A01G451500 chr7A 80.709 1213 211 15 978 2177 619021537 619022739 0.000000e+00 922.0
10 TraesCS4A01G451500 chr7A 79.756 1314 227 23 1055 2343 618677560 618678859 0.000000e+00 917.0
11 TraesCS4A01G451500 chr7A 80.453 839 134 22 1528 2349 619023171 619023996 5.830000e-172 614.0
12 TraesCS4A01G451500 chr7A 96.212 132 3 1 290 419 634386676 634386545 6.910000e-52 215.0
13 TraesCS4A01G451500 chr3B 93.068 577 14 1 2606 3182 775459403 775458853 0.000000e+00 821.0
14 TraesCS4A01G451500 chr3B 96.154 130 5 0 291 420 206185629 206185500 2.490000e-51 213.0
15 TraesCS4A01G451500 chr3B 91.275 149 12 1 265 412 52423107 52423255 5.380000e-48 202.0
16 TraesCS4A01G451500 chrUn 98.387 124 2 0 290 413 322720415 322720538 5.340000e-53 219.0
17 TraesCS4A01G451500 chr6B 96.183 131 5 0 288 418 52982640 52982770 6.910000e-52 215.0
18 TraesCS4A01G451500 chr2B 98.361 122 2 0 290 411 492619040 492619161 6.910000e-52 215.0
19 TraesCS4A01G451500 chr2B 97.561 123 3 0 290 412 694994252 694994130 8.940000e-51 211.0
20 TraesCS4A01G451500 chr5B 91.724 145 12 0 269 413 557532150 557532294 5.380000e-48 202.0
21 TraesCS4A01G451500 chr5B 91.781 146 11 1 273 418 695770792 695770648 5.380000e-48 202.0
22 TraesCS4A01G451500 chr4D 77.778 144 32 0 1570 1713 318927928 318928071 4.370000e-14 89.8
23 TraesCS4A01G451500 chr2D 100.000 32 0 0 1573 1604 630937259 630937228 3.430000e-05 60.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G451500 chr4A 716972492 716975673 3181 True 5877.0 5877 100.0000 1 3182 1 chr4A.!!$R1 3181
1 TraesCS4A01G451500 chr7D 17338858 17340122 1264 False 1742.0 1742 91.6010 1338 2601 1 chr7D.!!$F1 1263
2 TraesCS4A01G451500 chr7D 537667834 537670350 2516 False 930.5 933 80.3925 978 2349 2 chr7D.!!$F3 1371
3 TraesCS4A01G451500 chr7D 17322790 17323878 1088 False 672.5 1158 89.6790 144 1349 2 chr7D.!!$F2 1205
4 TraesCS4A01G451500 chr7B 580133684 580136203 2519 False 921.5 928 80.2295 978 2349 2 chr7B.!!$F1 1371
5 TraesCS4A01G451500 chr7A 618676349 618678859 2510 False 922.5 928 80.2975 978 2343 2 chr7A.!!$F1 1365
6 TraesCS4A01G451500 chr7A 619021537 619023996 2459 False 768.0 922 80.5810 978 2349 2 chr7A.!!$F2 1371
7 TraesCS4A01G451500 chr3B 775458853 775459403 550 True 821.0 821 93.0680 2606 3182 1 chr3B.!!$R2 576

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
407 408 0.032813 AGTATTTCCGGACGGAGGGA 60.033 55.0 13.64 4.95 46.06 4.20 F
525 546 0.037326 GAGTCGTCCATGCAAGTGGA 60.037 55.0 4.87 4.87 45.78 4.02 F
1417 1442 0.179054 GCATCTCATCTGCTGCCTCA 60.179 55.0 0.00 0.00 36.68 3.86 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1568 1599 0.251787 GGGCCAATCAAACAGGGAGT 60.252 55.0 4.39 0.0 0.0 3.85 R
1741 1775 0.591170 ATGTCGTCCAAAAACCTGCG 59.409 50.0 0.00 0.0 0.0 5.18 R
2587 4909 0.237498 GCCGCACTACCACTTGAAAC 59.763 55.0 0.00 0.0 0.0 2.78 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 27 6.949352 AAATTGCTAGATATGGTGGTTCTG 57.051 37.500 0.00 0.00 0.00 3.02
27 28 5.894298 ATTGCTAGATATGGTGGTTCTGA 57.106 39.130 0.00 0.00 0.00 3.27
28 29 4.944619 TGCTAGATATGGTGGTTCTGAG 57.055 45.455 0.00 0.00 0.00 3.35
29 30 3.643320 TGCTAGATATGGTGGTTCTGAGG 59.357 47.826 0.00 0.00 0.00 3.86
30 31 3.898123 GCTAGATATGGTGGTTCTGAGGA 59.102 47.826 0.00 0.00 0.00 3.71
31 32 4.021544 GCTAGATATGGTGGTTCTGAGGAG 60.022 50.000 0.00 0.00 0.00 3.69
32 33 4.271807 AGATATGGTGGTTCTGAGGAGA 57.728 45.455 0.00 0.00 0.00 3.71
33 34 4.624913 AGATATGGTGGTTCTGAGGAGAA 58.375 43.478 0.00 0.00 35.75 2.87
34 35 5.032846 AGATATGGTGGTTCTGAGGAGAAA 58.967 41.667 0.00 0.00 40.00 2.52
35 36 2.930826 TGGTGGTTCTGAGGAGAAAC 57.069 50.000 0.00 0.00 45.06 2.78
36 37 2.408565 TGGTGGTTCTGAGGAGAAACT 58.591 47.619 0.00 0.00 45.08 2.66
37 38 2.104792 TGGTGGTTCTGAGGAGAAACTG 59.895 50.000 0.00 0.00 45.08 3.16
38 39 2.551071 GGTGGTTCTGAGGAGAAACTGG 60.551 54.545 0.00 0.00 45.08 4.00
39 40 2.104963 GTGGTTCTGAGGAGAAACTGGT 59.895 50.000 0.00 0.00 45.08 4.00
40 41 2.777692 TGGTTCTGAGGAGAAACTGGTT 59.222 45.455 0.00 0.00 45.08 3.67
41 42 3.202151 TGGTTCTGAGGAGAAACTGGTTT 59.798 43.478 0.00 0.00 45.08 3.27
42 43 3.565902 GGTTCTGAGGAGAAACTGGTTTG 59.434 47.826 3.30 0.00 42.01 2.93
43 44 3.492102 TCTGAGGAGAAACTGGTTTGG 57.508 47.619 3.30 0.00 32.11 3.28
44 45 2.106511 TCTGAGGAGAAACTGGTTTGGG 59.893 50.000 3.30 0.00 32.11 4.12
45 46 1.850345 TGAGGAGAAACTGGTTTGGGT 59.150 47.619 3.30 0.00 32.11 4.51
46 47 2.230660 GAGGAGAAACTGGTTTGGGTG 58.769 52.381 3.30 0.00 32.11 4.61
47 48 1.850345 AGGAGAAACTGGTTTGGGTGA 59.150 47.619 3.30 0.00 32.11 4.02
48 49 2.447047 AGGAGAAACTGGTTTGGGTGAT 59.553 45.455 3.30 0.00 32.11 3.06
49 50 3.117131 AGGAGAAACTGGTTTGGGTGATT 60.117 43.478 3.30 0.00 32.11 2.57
50 51 3.641436 GGAGAAACTGGTTTGGGTGATTT 59.359 43.478 3.30 0.00 32.11 2.17
51 52 4.262036 GGAGAAACTGGTTTGGGTGATTTC 60.262 45.833 3.30 0.00 32.11 2.17
52 53 3.317993 AGAAACTGGTTTGGGTGATTTCG 59.682 43.478 3.30 0.00 32.11 3.46
53 54 2.649531 ACTGGTTTGGGTGATTTCGA 57.350 45.000 0.00 0.00 0.00 3.71
54 55 2.938838 ACTGGTTTGGGTGATTTCGAA 58.061 42.857 0.00 0.00 0.00 3.71
55 56 3.292460 ACTGGTTTGGGTGATTTCGAAA 58.708 40.909 13.91 13.91 0.00 3.46
56 57 3.067601 ACTGGTTTGGGTGATTTCGAAAC 59.932 43.478 13.81 8.03 33.88 2.78
57 58 3.292460 TGGTTTGGGTGATTTCGAAACT 58.708 40.909 13.81 2.58 34.66 2.66
58 59 3.067461 TGGTTTGGGTGATTTCGAAACTG 59.933 43.478 13.81 0.00 34.66 3.16
59 60 3.552068 GGTTTGGGTGATTTCGAAACTGG 60.552 47.826 13.81 0.00 34.66 4.00
60 61 2.940994 TGGGTGATTTCGAAACTGGA 57.059 45.000 13.81 0.00 0.00 3.86
61 62 2.500229 TGGGTGATTTCGAAACTGGAC 58.500 47.619 13.81 7.24 0.00 4.02
62 63 2.158740 TGGGTGATTTCGAAACTGGACA 60.159 45.455 13.81 7.47 0.00 4.02
63 64 2.882137 GGGTGATTTCGAAACTGGACAA 59.118 45.455 13.81 0.00 0.00 3.18
64 65 3.058224 GGGTGATTTCGAAACTGGACAAG 60.058 47.826 13.81 0.00 0.00 3.16
65 66 3.813166 GGTGATTTCGAAACTGGACAAGA 59.187 43.478 13.81 0.00 0.00 3.02
66 67 4.083802 GGTGATTTCGAAACTGGACAAGAG 60.084 45.833 13.81 0.00 0.00 2.85
67 68 4.065088 TGATTTCGAAACTGGACAAGAGG 58.935 43.478 13.81 0.00 0.00 3.69
68 69 3.830744 TTTCGAAACTGGACAAGAGGA 57.169 42.857 6.47 0.00 0.00 3.71
69 70 4.351874 TTTCGAAACTGGACAAGAGGAT 57.648 40.909 6.47 0.00 0.00 3.24
70 71 4.351874 TTCGAAACTGGACAAGAGGATT 57.648 40.909 0.00 0.00 0.00 3.01
71 72 5.477607 TTCGAAACTGGACAAGAGGATTA 57.522 39.130 0.00 0.00 0.00 1.75
72 73 4.817517 TCGAAACTGGACAAGAGGATTAC 58.182 43.478 0.00 0.00 0.00 1.89
73 74 4.282449 TCGAAACTGGACAAGAGGATTACA 59.718 41.667 0.00 0.00 0.00 2.41
74 75 4.994852 CGAAACTGGACAAGAGGATTACAA 59.005 41.667 0.00 0.00 0.00 2.41
75 76 5.120830 CGAAACTGGACAAGAGGATTACAAG 59.879 44.000 0.00 0.00 0.00 3.16
76 77 5.568620 AACTGGACAAGAGGATTACAAGT 57.431 39.130 0.00 0.00 0.00 3.16
77 78 4.899502 ACTGGACAAGAGGATTACAAGTG 58.100 43.478 0.00 0.00 0.00 3.16
78 79 3.674997 TGGACAAGAGGATTACAAGTGC 58.325 45.455 0.00 0.00 0.00 4.40
79 80 3.010420 GGACAAGAGGATTACAAGTGCC 58.990 50.000 0.00 0.00 0.00 5.01
80 81 3.307762 GGACAAGAGGATTACAAGTGCCT 60.308 47.826 0.00 0.00 0.00 4.75
81 82 4.081087 GGACAAGAGGATTACAAGTGCCTA 60.081 45.833 0.00 0.00 0.00 3.93
82 83 5.488341 GACAAGAGGATTACAAGTGCCTAA 58.512 41.667 0.00 0.00 0.00 2.69
83 84 5.491982 ACAAGAGGATTACAAGTGCCTAAG 58.508 41.667 0.00 0.00 0.00 2.18
84 85 5.013183 ACAAGAGGATTACAAGTGCCTAAGT 59.987 40.000 0.00 0.00 0.00 2.24
85 86 5.346181 AGAGGATTACAAGTGCCTAAGTC 57.654 43.478 0.00 0.00 0.00 3.01
86 87 4.162509 AGAGGATTACAAGTGCCTAAGTCC 59.837 45.833 0.00 0.00 0.00 3.85
87 88 4.104831 AGGATTACAAGTGCCTAAGTCCT 58.895 43.478 0.00 0.00 0.00 3.85
88 89 4.536489 AGGATTACAAGTGCCTAAGTCCTT 59.464 41.667 0.00 0.00 29.69 3.36
89 90 4.636206 GGATTACAAGTGCCTAAGTCCTTG 59.364 45.833 0.00 0.00 40.05 3.61
90 91 4.699925 TTACAAGTGCCTAAGTCCTTGT 57.300 40.909 8.69 8.69 46.62 3.16
91 92 5.811796 TTACAAGTGCCTAAGTCCTTGTA 57.188 39.130 6.93 6.93 44.08 2.41
92 93 4.699925 ACAAGTGCCTAAGTCCTTGTAA 57.300 40.909 2.30 0.00 44.08 2.41
93 94 4.642429 ACAAGTGCCTAAGTCCTTGTAAG 58.358 43.478 2.30 0.00 44.08 2.34
94 95 4.347000 ACAAGTGCCTAAGTCCTTGTAAGA 59.653 41.667 2.30 0.00 44.08 2.10
95 96 5.163237 ACAAGTGCCTAAGTCCTTGTAAGAA 60.163 40.000 2.30 0.00 44.08 2.52
96 97 5.763876 AGTGCCTAAGTCCTTGTAAGAAT 57.236 39.130 0.00 0.00 0.00 2.40
97 98 6.128138 AGTGCCTAAGTCCTTGTAAGAATT 57.872 37.500 0.00 0.00 0.00 2.17
98 99 6.543735 AGTGCCTAAGTCCTTGTAAGAATTT 58.456 36.000 0.00 0.00 0.00 1.82
99 100 7.004691 AGTGCCTAAGTCCTTGTAAGAATTTT 58.995 34.615 0.00 0.00 0.00 1.82
100 101 7.505923 AGTGCCTAAGTCCTTGTAAGAATTTTT 59.494 33.333 0.00 0.00 0.00 1.94
101 102 7.595130 GTGCCTAAGTCCTTGTAAGAATTTTTG 59.405 37.037 0.00 0.00 0.00 2.44
102 103 6.586463 GCCTAAGTCCTTGTAAGAATTTTTGC 59.414 38.462 0.00 0.00 0.00 3.68
103 104 7.090808 CCTAAGTCCTTGTAAGAATTTTTGCC 58.909 38.462 0.00 0.00 0.00 4.52
104 105 6.478512 AAGTCCTTGTAAGAATTTTTGCCA 57.521 33.333 0.00 0.00 0.00 4.92
105 106 6.089249 AGTCCTTGTAAGAATTTTTGCCAG 57.911 37.500 0.00 0.00 0.00 4.85
106 107 4.686091 GTCCTTGTAAGAATTTTTGCCAGC 59.314 41.667 0.00 0.00 0.00 4.85
107 108 4.343526 TCCTTGTAAGAATTTTTGCCAGCA 59.656 37.500 0.00 0.00 0.00 4.41
108 109 5.011943 TCCTTGTAAGAATTTTTGCCAGCAT 59.988 36.000 0.00 0.00 0.00 3.79
109 110 6.210385 TCCTTGTAAGAATTTTTGCCAGCATA 59.790 34.615 0.00 0.00 0.00 3.14
110 111 7.043565 CCTTGTAAGAATTTTTGCCAGCATAT 58.956 34.615 0.00 0.00 0.00 1.78
111 112 7.223387 CCTTGTAAGAATTTTTGCCAGCATATC 59.777 37.037 0.00 0.00 0.00 1.63
112 113 6.572519 TGTAAGAATTTTTGCCAGCATATCC 58.427 36.000 0.00 0.00 0.00 2.59
113 114 5.680594 AAGAATTTTTGCCAGCATATCCA 57.319 34.783 0.00 0.00 0.00 3.41
114 115 5.881923 AGAATTTTTGCCAGCATATCCAT 57.118 34.783 0.00 0.00 0.00 3.41
115 116 6.982160 AGAATTTTTGCCAGCATATCCATA 57.018 33.333 0.00 0.00 0.00 2.74
116 117 6.752168 AGAATTTTTGCCAGCATATCCATAC 58.248 36.000 0.00 0.00 0.00 2.39
117 118 4.935352 TTTTTGCCAGCATATCCATACC 57.065 40.909 0.00 0.00 0.00 2.73
118 119 2.183478 TTGCCAGCATATCCATACCG 57.817 50.000 0.00 0.00 0.00 4.02
119 120 0.321564 TGCCAGCATATCCATACCGC 60.322 55.000 0.00 0.00 0.00 5.68
120 121 1.026718 GCCAGCATATCCATACCGCC 61.027 60.000 0.00 0.00 0.00 6.13
121 122 0.392998 CCAGCATATCCATACCGCCC 60.393 60.000 0.00 0.00 0.00 6.13
122 123 0.740868 CAGCATATCCATACCGCCCG 60.741 60.000 0.00 0.00 0.00 6.13
123 124 2.106683 GCATATCCATACCGCCCGC 61.107 63.158 0.00 0.00 0.00 6.13
124 125 1.449601 CATATCCATACCGCCCGCC 60.450 63.158 0.00 0.00 0.00 6.13
125 126 1.916273 ATATCCATACCGCCCGCCA 60.916 57.895 0.00 0.00 0.00 5.69
126 127 2.180159 ATATCCATACCGCCCGCCAC 62.180 60.000 0.00 0.00 0.00 5.01
136 137 4.752879 CCCGCCACGTGTACTGGG 62.753 72.222 15.65 15.06 0.00 4.45
138 139 4.673298 CGCCACGTGTACTGGGCA 62.673 66.667 15.65 0.00 46.75 5.36
139 140 2.046314 GCCACGTGTACTGGGCAT 60.046 61.111 15.65 0.00 45.70 4.40
140 141 2.106683 GCCACGTGTACTGGGCATC 61.107 63.158 15.65 0.00 45.70 3.91
141 142 1.295101 CCACGTGTACTGGGCATCA 59.705 57.895 15.65 0.00 0.00 3.07
142 143 0.321210 CCACGTGTACTGGGCATCAA 60.321 55.000 15.65 0.00 0.00 2.57
145 146 1.078709 CGTGTACTGGGCATCAACAG 58.921 55.000 0.00 0.00 40.48 3.16
156 157 2.548875 GCATCAACAGAGCTAGGACTG 58.451 52.381 0.00 0.00 39.65 3.51
171 172 6.098982 AGCTAGGACTGCACTTGTTCTATATT 59.901 38.462 0.00 0.00 0.00 1.28
174 175 5.105310 AGGACTGCACTTGTTCTATATTCGT 60.105 40.000 0.00 0.00 0.00 3.85
179 180 4.494199 GCACTTGTTCTATATTCGTGGCAC 60.494 45.833 7.79 7.79 0.00 5.01
195 196 4.574421 CGTGGCACCATTTTAGTATCATCA 59.426 41.667 12.86 0.00 0.00 3.07
233 234 3.580022 AGATGGTCTCACTGTCATGAACA 59.420 43.478 0.00 0.00 36.18 3.18
248 249 8.050778 TGTCATGAACAAGTTTTAACTTCAGT 57.949 30.769 0.00 0.00 45.65 3.41
257 258 6.715347 AGTTTTAACTTCAGTGGAGCATTT 57.285 33.333 0.00 0.00 35.21 2.32
258 259 6.507023 AGTTTTAACTTCAGTGGAGCATTTG 58.493 36.000 0.00 0.00 35.21 2.32
259 260 4.503741 TTAACTTCAGTGGAGCATTTGC 57.496 40.909 0.00 0.00 42.49 3.68
260 261 1.985473 ACTTCAGTGGAGCATTTGCA 58.015 45.000 5.20 0.00 45.16 4.08
291 292 9.981460 AAGTTCATTTTCTATTTCCTGATACCT 57.019 29.630 0.00 0.00 0.00 3.08
292 293 9.620259 AGTTCATTTTCTATTTCCTGATACCTC 57.380 33.333 0.00 0.00 0.00 3.85
293 294 8.841300 GTTCATTTTCTATTTCCTGATACCTCC 58.159 37.037 0.00 0.00 0.00 4.30
294 295 7.217200 TCATTTTCTATTTCCTGATACCTCCG 58.783 38.462 0.00 0.00 0.00 4.63
295 296 6.555463 TTTTCTATTTCCTGATACCTCCGT 57.445 37.500 0.00 0.00 0.00 4.69
296 297 5.786264 TTCTATTTCCTGATACCTCCGTC 57.214 43.478 0.00 0.00 0.00 4.79
297 298 4.150359 TCTATTTCCTGATACCTCCGTCC 58.850 47.826 0.00 0.00 0.00 4.79
298 299 2.241281 TTTCCTGATACCTCCGTCCA 57.759 50.000 0.00 0.00 0.00 4.02
299 300 2.241281 TTCCTGATACCTCCGTCCAA 57.759 50.000 0.00 0.00 0.00 3.53
300 301 2.241281 TCCTGATACCTCCGTCCAAA 57.759 50.000 0.00 0.00 0.00 3.28
301 302 2.542550 TCCTGATACCTCCGTCCAAAA 58.457 47.619 0.00 0.00 0.00 2.44
302 303 2.907696 TCCTGATACCTCCGTCCAAAAA 59.092 45.455 0.00 0.00 0.00 1.94
303 304 3.521937 TCCTGATACCTCCGTCCAAAAAT 59.478 43.478 0.00 0.00 0.00 1.82
304 305 4.717778 TCCTGATACCTCCGTCCAAAAATA 59.282 41.667 0.00 0.00 0.00 1.40
305 306 4.814771 CCTGATACCTCCGTCCAAAAATAC 59.185 45.833 0.00 0.00 0.00 1.89
306 307 5.396436 CCTGATACCTCCGTCCAAAAATACT 60.396 44.000 0.00 0.00 0.00 2.12
307 308 6.057321 TGATACCTCCGTCCAAAAATACTT 57.943 37.500 0.00 0.00 0.00 2.24
308 309 5.878116 TGATACCTCCGTCCAAAAATACTTG 59.122 40.000 0.00 0.00 0.00 3.16
309 310 4.094830 ACCTCCGTCCAAAAATACTTGT 57.905 40.909 0.00 0.00 0.00 3.16
310 311 4.070009 ACCTCCGTCCAAAAATACTTGTC 58.930 43.478 0.00 0.00 0.00 3.18
311 312 4.069304 CCTCCGTCCAAAAATACTTGTCA 58.931 43.478 0.00 0.00 0.00 3.58
312 313 4.700213 CCTCCGTCCAAAAATACTTGTCAT 59.300 41.667 0.00 0.00 0.00 3.06
313 314 5.163754 CCTCCGTCCAAAAATACTTGTCATC 60.164 44.000 0.00 0.00 0.00 2.92
314 315 5.309638 TCCGTCCAAAAATACTTGTCATCA 58.690 37.500 0.00 0.00 0.00 3.07
315 316 5.765677 TCCGTCCAAAAATACTTGTCATCAA 59.234 36.000 0.00 0.00 0.00 2.57
316 317 6.263392 TCCGTCCAAAAATACTTGTCATCAAA 59.737 34.615 0.00 0.00 32.87 2.69
317 318 6.920758 CCGTCCAAAAATACTTGTCATCAAAA 59.079 34.615 0.00 0.00 32.87 2.44
318 319 7.598493 CCGTCCAAAAATACTTGTCATCAAAAT 59.402 33.333 0.00 0.00 32.87 1.82
319 320 8.427012 CGTCCAAAAATACTTGTCATCAAAATG 58.573 33.333 0.00 0.00 32.87 2.32
320 321 8.711457 GTCCAAAAATACTTGTCATCAAAATGG 58.289 33.333 0.00 0.00 33.42 3.16
321 322 8.646004 TCCAAAAATACTTGTCATCAAAATGGA 58.354 29.630 0.00 0.00 33.42 3.41
322 323 8.711457 CCAAAAATACTTGTCATCAAAATGGAC 58.289 33.333 0.00 0.00 33.42 4.02
323 324 9.258826 CAAAAATACTTGTCATCAAAATGGACA 57.741 29.630 0.00 0.00 33.42 4.02
324 325 9.829507 AAAAATACTTGTCATCAAAATGGACAA 57.170 25.926 0.00 0.00 34.59 3.18
325 326 9.829507 AAAATACTTGTCATCAAAATGGACAAA 57.170 25.926 7.70 0.00 34.98 2.83
326 327 9.829507 AAATACTTGTCATCAAAATGGACAAAA 57.170 25.926 7.70 0.84 34.98 2.44
327 328 9.829507 AATACTTGTCATCAAAATGGACAAAAA 57.170 25.926 7.70 0.55 34.98 1.94
328 329 7.775397 ACTTGTCATCAAAATGGACAAAAAG 57.225 32.000 7.70 0.11 34.98 2.27
329 330 6.762661 ACTTGTCATCAAAATGGACAAAAAGG 59.237 34.615 7.70 0.11 34.98 3.11
330 331 5.609423 TGTCATCAAAATGGACAAAAAGGG 58.391 37.500 0.00 0.00 33.42 3.95
331 332 5.365025 TGTCATCAAAATGGACAAAAAGGGA 59.635 36.000 0.00 0.00 33.42 4.20
332 333 6.043012 TGTCATCAAAATGGACAAAAAGGGAT 59.957 34.615 0.00 0.00 33.42 3.85
333 334 6.369615 GTCATCAAAATGGACAAAAAGGGATG 59.630 38.462 0.00 0.00 33.42 3.51
334 335 5.885449 TCAAAATGGACAAAAAGGGATGT 57.115 34.783 0.00 0.00 0.00 3.06
335 336 6.985653 TCAAAATGGACAAAAAGGGATGTA 57.014 33.333 0.00 0.00 0.00 2.29
336 337 7.552050 TCAAAATGGACAAAAAGGGATGTAT 57.448 32.000 0.00 0.00 0.00 2.29
337 338 7.610865 TCAAAATGGACAAAAAGGGATGTATC 58.389 34.615 0.00 0.00 0.00 2.24
338 339 7.454380 TCAAAATGGACAAAAAGGGATGTATCT 59.546 33.333 0.00 0.00 0.00 1.98
339 340 8.748412 CAAAATGGACAAAAAGGGATGTATCTA 58.252 33.333 0.00 0.00 0.00 1.98
340 341 8.525290 AAATGGACAAAAAGGGATGTATCTAG 57.475 34.615 0.00 0.00 0.00 2.43
341 342 6.884472 TGGACAAAAAGGGATGTATCTAGA 57.116 37.500 0.00 0.00 0.00 2.43
342 343 7.265599 TGGACAAAAAGGGATGTATCTAGAA 57.734 36.000 0.00 0.00 0.00 2.10
343 344 7.110155 TGGACAAAAAGGGATGTATCTAGAAC 58.890 38.462 0.00 0.00 0.00 3.01
344 345 7.037586 TGGACAAAAAGGGATGTATCTAGAACT 60.038 37.037 0.00 0.00 0.00 3.01
345 346 7.281100 GGACAAAAAGGGATGTATCTAGAACTG 59.719 40.741 0.00 0.00 0.00 3.16
346 347 7.918076 ACAAAAAGGGATGTATCTAGAACTGA 58.082 34.615 0.00 0.00 0.00 3.41
347 348 8.383175 ACAAAAAGGGATGTATCTAGAACTGAA 58.617 33.333 0.00 0.00 0.00 3.02
348 349 9.231297 CAAAAAGGGATGTATCTAGAACTGAAA 57.769 33.333 0.00 0.00 0.00 2.69
349 350 9.981460 AAAAAGGGATGTATCTAGAACTGAAAT 57.019 29.630 0.00 0.00 0.00 2.17
352 353 8.783660 AGGGATGTATCTAGAACTGAAATACA 57.216 34.615 0.00 0.00 37.26 2.29
353 354 9.386122 AGGGATGTATCTAGAACTGAAATACAT 57.614 33.333 11.05 11.05 42.96 2.29
366 367 9.646427 GAACTGAAATACATCTAGATACATCCC 57.354 37.037 4.54 0.00 0.00 3.85
367 368 8.140112 ACTGAAATACATCTAGATACATCCCC 57.860 38.462 4.54 0.00 0.00 4.81
368 369 7.958583 ACTGAAATACATCTAGATACATCCCCT 59.041 37.037 4.54 0.00 0.00 4.79
369 370 8.742125 TGAAATACATCTAGATACATCCCCTT 57.258 34.615 4.54 0.00 0.00 3.95
370 371 9.170890 TGAAATACATCTAGATACATCCCCTTT 57.829 33.333 4.54 0.00 0.00 3.11
376 377 9.170890 ACATCTAGATACATCCCCTTTTATTCA 57.829 33.333 4.54 0.00 0.00 2.57
382 383 9.713684 AGATACATCCCCTTTTATTCATTTTGA 57.286 29.630 0.00 0.00 0.00 2.69
385 386 8.378115 ACATCCCCTTTTATTCATTTTGATGA 57.622 30.769 0.00 0.00 32.39 2.92
386 387 8.260114 ACATCCCCTTTTATTCATTTTGATGAC 58.740 33.333 0.00 0.00 32.39 3.06
387 388 7.789202 TCCCCTTTTATTCATTTTGATGACA 57.211 32.000 0.00 0.00 0.00 3.58
388 389 8.200024 TCCCCTTTTATTCATTTTGATGACAA 57.800 30.769 0.00 0.00 0.00 3.18
389 390 8.313292 TCCCCTTTTATTCATTTTGATGACAAG 58.687 33.333 0.00 0.00 37.32 3.16
390 391 8.096414 CCCCTTTTATTCATTTTGATGACAAGT 58.904 33.333 0.00 0.00 37.32 3.16
397 398 8.915871 ATTCATTTTGATGACAAGTATTTCCG 57.084 30.769 0.00 0.00 37.32 4.30
398 399 6.851609 TCATTTTGATGACAAGTATTTCCGG 58.148 36.000 0.00 0.00 37.32 5.14
399 400 6.657117 TCATTTTGATGACAAGTATTTCCGGA 59.343 34.615 0.00 0.00 37.32 5.14
400 401 5.873179 TTTGATGACAAGTATTTCCGGAC 57.127 39.130 1.83 0.00 37.32 4.79
401 402 3.517602 TGATGACAAGTATTTCCGGACG 58.482 45.455 1.83 0.00 0.00 4.79
402 403 2.373540 TGACAAGTATTTCCGGACGG 57.626 50.000 1.83 3.96 0.00 4.79
403 404 1.894466 TGACAAGTATTTCCGGACGGA 59.106 47.619 1.83 9.76 43.52 4.69
404 405 2.094390 TGACAAGTATTTCCGGACGGAG 60.094 50.000 13.64 3.15 46.06 4.63
405 406 1.206371 ACAAGTATTTCCGGACGGAGG 59.794 52.381 13.64 0.00 46.06 4.30
406 407 0.828677 AAGTATTTCCGGACGGAGGG 59.171 55.000 13.64 0.00 46.06 4.30
407 408 0.032813 AGTATTTCCGGACGGAGGGA 60.033 55.000 13.64 4.95 46.06 4.20
408 409 0.388294 GTATTTCCGGACGGAGGGAG 59.612 60.000 13.64 0.00 46.06 4.30
409 410 0.032813 TATTTCCGGACGGAGGGAGT 60.033 55.000 13.64 0.00 46.06 3.85
410 411 0.032813 ATTTCCGGACGGAGGGAGTA 60.033 55.000 13.64 0.00 46.06 2.59
427 428 4.321378 GGGAGTATAACTCTGCCGAGAATC 60.321 50.000 12.54 0.00 44.46 2.52
464 465 7.543868 TCTGTCCAAGTGTTTTAACAATGTTTG 59.456 33.333 3.17 0.00 41.21 2.93
525 546 0.037326 GAGTCGTCCATGCAAGTGGA 60.037 55.000 4.87 4.87 45.78 4.02
534 555 1.426598 CATGCAAGTGGATAGGGGGAT 59.573 52.381 0.00 0.00 0.00 3.85
535 556 1.607225 TGCAAGTGGATAGGGGGATT 58.393 50.000 0.00 0.00 0.00 3.01
536 557 2.782922 TGCAAGTGGATAGGGGGATTA 58.217 47.619 0.00 0.00 0.00 1.75
537 558 2.711009 TGCAAGTGGATAGGGGGATTAG 59.289 50.000 0.00 0.00 0.00 1.73
538 559 2.979678 GCAAGTGGATAGGGGGATTAGA 59.020 50.000 0.00 0.00 0.00 2.10
539 560 3.394606 GCAAGTGGATAGGGGGATTAGAA 59.605 47.826 0.00 0.00 0.00 2.10
540 561 4.505742 GCAAGTGGATAGGGGGATTAGAAG 60.506 50.000 0.00 0.00 0.00 2.85
541 562 4.578149 AGTGGATAGGGGGATTAGAAGT 57.422 45.455 0.00 0.00 0.00 3.01
564 585 3.305398 AGAACTGCCTAAGTCGTTCAG 57.695 47.619 0.00 0.00 38.56 3.02
565 586 2.891580 AGAACTGCCTAAGTCGTTCAGA 59.108 45.455 0.00 0.00 38.56 3.27
593 616 6.751888 AGAAATTTTTAGCATATCCGTGTTGC 59.248 34.615 0.00 0.00 36.63 4.17
594 617 4.364415 TTTTTAGCATATCCGTGTTGCC 57.636 40.909 0.00 0.00 37.07 4.52
598 621 1.523711 CATATCCGTGTTGCCGCCT 60.524 57.895 0.00 0.00 0.00 5.52
603 626 4.012895 CGTGTTGCCGCCTGTGTC 62.013 66.667 0.00 0.00 0.00 3.67
610 633 4.104143 CCGCCTGTGTCGGTTATC 57.896 61.111 0.00 0.00 41.85 1.75
611 634 1.520787 CCGCCTGTGTCGGTTATCC 60.521 63.158 0.00 0.00 41.85 2.59
656 680 2.260844 ATTCGGTGTATGCATCAGGG 57.739 50.000 0.19 0.00 0.00 4.45
657 681 1.199615 TTCGGTGTATGCATCAGGGA 58.800 50.000 0.19 0.00 0.00 4.20
658 682 0.752658 TCGGTGTATGCATCAGGGAG 59.247 55.000 0.19 0.00 0.00 4.30
684 708 1.439679 AAAGTAGTAGCTTGCGGCAC 58.560 50.000 0.05 0.00 44.79 5.01
692 716 0.523072 AGCTTGCGGCACTGTTATTG 59.477 50.000 0.05 0.00 44.79 1.90
700 724 3.485877 GCGGCACTGTTATTGTCATCTTC 60.486 47.826 0.00 0.00 0.00 2.87
703 727 5.755375 CGGCACTGTTATTGTCATCTTCTAT 59.245 40.000 0.00 0.00 0.00 1.98
734 758 7.658982 TGATGAGCCTCATTATCATGTAGAAAC 59.341 37.037 8.93 0.00 37.20 2.78
759 783 7.092891 ACCAGTTCATCTTGTCCTCATATAACA 60.093 37.037 0.00 0.00 0.00 2.41
765 789 5.664457 TCTTGTCCTCATATAACACTGCAG 58.336 41.667 13.48 13.48 0.00 4.41
766 790 5.422012 TCTTGTCCTCATATAACACTGCAGA 59.578 40.000 23.35 0.00 0.00 4.26
773 797 7.658982 TCCTCATATAACACTGCAGAATCAATC 59.341 37.037 23.35 0.00 0.00 2.67
791 816 8.693542 AATCAATCGAATCAAATTCTTTGTCC 57.306 30.769 0.00 0.00 41.36 4.02
792 817 6.314018 TCAATCGAATCAAATTCTTTGTCCG 58.686 36.000 0.00 3.28 41.36 4.79
794 819 5.029650 TCGAATCAAATTCTTTGTCCGTG 57.970 39.130 0.04 0.00 41.36 4.94
795 820 3.603770 CGAATCAAATTCTTTGTCCGTGC 59.396 43.478 0.04 0.00 41.36 5.34
811 836 3.119459 TCCGTGCAAGTGTTTAGCAAAAA 60.119 39.130 0.00 0.00 40.35 1.94
886 911 7.736447 AAATGTGCTTATCCATTCTACTAGC 57.264 36.000 0.00 0.00 31.15 3.42
913 938 7.398829 TGCTACCTACATTTTCCATTTAGTCA 58.601 34.615 0.00 0.00 0.00 3.41
923 948 7.979115 TTTTCCATTTAGTCAACTCGTTTTG 57.021 32.000 0.00 0.00 0.00 2.44
927 952 7.190871 TCCATTTAGTCAACTCGTTTTGTTTC 58.809 34.615 0.00 0.00 0.00 2.78
941 966 6.483974 TCGTTTTGTTTCTAGCCTGTCATTTA 59.516 34.615 0.00 0.00 0.00 1.40
1108 1133 2.557924 GTTGACCTGTTGCATTCCATCA 59.442 45.455 0.00 0.00 0.00 3.07
1125 1150 3.484407 CATCATTCCTCTGTTGGGATCC 58.516 50.000 1.92 1.92 32.41 3.36
1134 1159 3.576118 CTCTGTTGGGATCCTATGTCGAT 59.424 47.826 12.58 0.00 0.00 3.59
1139 1164 5.419155 TGTTGGGATCCTATGTCGATCTATC 59.581 44.000 12.58 0.00 37.02 2.08
1159 1184 4.811555 TCTGTGTTTGTTAGCACATGTC 57.188 40.909 0.00 0.00 43.52 3.06
1220 1245 1.861982 ACCTTATGCACGGTACTCCT 58.138 50.000 2.55 0.00 0.00 3.69
1323 1348 3.383620 AAGCTCATCGATCTAGCCAAG 57.616 47.619 20.44 0.00 36.92 3.61
1359 1384 1.012841 GCTGCCAGATTCCTCGAAAG 58.987 55.000 0.00 0.00 0.00 2.62
1417 1442 0.179054 GCATCTCATCTGCTGCCTCA 60.179 55.000 0.00 0.00 36.68 3.86
1479 1504 3.334583 TTTTCACCTCCATCTCTTCCG 57.665 47.619 0.00 0.00 0.00 4.30
1526 1557 2.889154 TATGGCACTCTGACAGCGCG 62.889 60.000 0.00 0.00 39.76 6.86
1567 1598 3.201290 CATCTACTTGTCAGCACCCATC 58.799 50.000 0.00 0.00 0.00 3.51
1568 1599 2.256306 TCTACTTGTCAGCACCCATCA 58.744 47.619 0.00 0.00 0.00 3.07
1588 1619 0.251742 CTCCCTGTTTGATTGGCCCA 60.252 55.000 0.00 0.00 0.00 5.36
1616 1647 3.900601 AGTGACTCTTGGTCTCAACTCAT 59.099 43.478 0.00 0.00 44.74 2.90
1621 1652 3.668447 TCTTGGTCTCAACTCATGCTTC 58.332 45.455 0.00 0.00 0.00 3.86
1741 1775 2.019156 GCCTGGAGCAGATAACAACCC 61.019 57.143 0.00 0.00 42.97 4.11
1781 1818 1.227342 GCCAAATGCCCACAAAACCG 61.227 55.000 0.00 0.00 0.00 4.44
1791 1828 2.355310 CCCACAAAACCGATGGCTAGTA 60.355 50.000 0.00 0.00 31.66 1.82
1794 1831 4.382254 CCACAAAACCGATGGCTAGTAGTA 60.382 45.833 0.00 0.00 0.00 1.82
1799 1836 3.828921 ACCGATGGCTAGTAGTATGTGA 58.171 45.455 0.00 0.00 0.00 3.58
1815 1852 6.225703 GTATGTGATGACATGCTTCTCATC 57.774 41.667 8.17 14.20 43.03 2.92
1816 1853 4.210724 TGTGATGACATGCTTCTCATCA 57.789 40.909 18.03 18.03 46.82 3.07
1822 1859 4.014406 TGACATGCTTCTCATCATTTGCT 58.986 39.130 0.00 0.00 31.79 3.91
1829 1866 8.512138 CATGCTTCTCATCATTTGCTATTATGA 58.488 33.333 0.00 0.00 35.43 2.15
1859 1896 2.637382 TGTCATCTAAAGCACCAGTCCA 59.363 45.455 0.00 0.00 0.00 4.02
2019 4324 0.828677 GGTGGAGTAACCGGCTGTAT 59.171 55.000 0.00 0.00 42.61 2.29
2200 4506 3.413846 AGTGATCATCAGTGTGCAACT 57.586 42.857 0.00 0.00 40.93 3.16
2201 4507 4.541973 AGTGATCATCAGTGTGCAACTA 57.458 40.909 0.00 0.00 36.83 2.24
2258 4574 3.472533 CAGAGACTTCTGCAGCGC 58.527 61.111 9.47 0.00 43.98 5.92
2287 4606 4.467438 GGTTGATTTTCATGGTGGAAGGAT 59.533 41.667 0.00 0.00 0.00 3.24
2296 4615 1.299976 GTGGAAGGATGGCCGAAGT 59.700 57.895 0.00 0.00 39.96 3.01
2338 4658 9.288576 TCATCTTCAGTTTTCAGAACATTGTAT 57.711 29.630 0.00 0.00 0.00 2.29
2355 4675 8.034058 ACATTGTATGAGACTTTTACTCAAGC 57.966 34.615 0.00 0.00 45.44 4.01
2360 4680 8.559536 TGTATGAGACTTTTACTCAAGCTTTTG 58.440 33.333 0.00 0.00 45.44 2.44
2393 4713 6.576662 TGCCATTCCGTTTTCTGTTTAATA 57.423 33.333 0.00 0.00 0.00 0.98
2476 4796 3.906720 TGTGCTGGAATAGGTAGGTTC 57.093 47.619 0.00 0.00 0.00 3.62
2483 4803 3.209152 TGGAATAGGTAGGTTCCTAGCCT 59.791 47.826 20.12 18.58 43.41 4.58
2520 4840 2.094130 ACGGAAGTGCTTAGACCTTAGC 60.094 50.000 1.46 1.46 46.97 3.09
2546 4868 5.765182 AGAGGTGTGTTCCTTTTATCAGTTG 59.235 40.000 0.00 0.00 38.02 3.16
2547 4869 4.827284 AGGTGTGTTCCTTTTATCAGTTGG 59.173 41.667 0.00 0.00 33.52 3.77
2548 4870 4.546570 GTGTGTTCCTTTTATCAGTTGGC 58.453 43.478 0.00 0.00 0.00 4.52
2573 4895 5.067283 AGGTGTGCTGTTTTTAACTACTTGG 59.933 40.000 0.00 0.00 0.00 3.61
2574 4896 4.738252 GTGTGCTGTTTTTAACTACTTGGC 59.262 41.667 0.00 0.00 0.00 4.52
2575 4897 4.642885 TGTGCTGTTTTTAACTACTTGGCT 59.357 37.500 0.00 0.00 0.00 4.75
2578 4900 5.008613 TGCTGTTTTTAACTACTTGGCTGAG 59.991 40.000 0.00 0.00 0.00 3.35
2581 4903 5.008613 TGTTTTTAACTACTTGGCTGAGCTG 59.991 40.000 3.72 0.00 0.00 4.24
2586 4908 2.104792 ACTACTTGGCTGAGCTGACAAA 59.895 45.455 3.72 0.00 34.17 2.83
2587 4909 1.602311 ACTTGGCTGAGCTGACAAAG 58.398 50.000 3.72 3.88 34.17 2.77
2590 4912 2.057137 TGGCTGAGCTGACAAAGTTT 57.943 45.000 3.72 0.00 0.00 2.66
2591 4913 1.949525 TGGCTGAGCTGACAAAGTTTC 59.050 47.619 3.72 0.00 0.00 2.78
2592 4914 1.949525 GGCTGAGCTGACAAAGTTTCA 59.050 47.619 3.72 0.00 0.00 2.69
2593 4915 2.358898 GGCTGAGCTGACAAAGTTTCAA 59.641 45.455 3.72 0.00 0.00 2.69
2594 4916 3.549625 GGCTGAGCTGACAAAGTTTCAAG 60.550 47.826 3.72 0.00 0.00 3.02
2595 4917 3.065925 GCTGAGCTGACAAAGTTTCAAGT 59.934 43.478 0.00 0.00 0.00 3.16
2596 4918 4.595116 CTGAGCTGACAAAGTTTCAAGTG 58.405 43.478 0.00 0.00 0.00 3.16
2597 4919 3.378112 TGAGCTGACAAAGTTTCAAGTGG 59.622 43.478 0.00 0.00 0.00 4.00
2598 4920 3.356290 AGCTGACAAAGTTTCAAGTGGT 58.644 40.909 0.00 0.00 0.00 4.16
2599 4921 4.523083 AGCTGACAAAGTTTCAAGTGGTA 58.477 39.130 0.00 0.00 0.00 3.25
2600 4922 4.576463 AGCTGACAAAGTTTCAAGTGGTAG 59.424 41.667 0.00 0.00 0.00 3.18
2601 4923 4.335594 GCTGACAAAGTTTCAAGTGGTAGT 59.664 41.667 0.00 0.00 0.00 2.73
2602 4924 5.730568 GCTGACAAAGTTTCAAGTGGTAGTG 60.731 44.000 0.00 0.00 0.00 2.74
2603 4925 4.095782 TGACAAAGTTTCAAGTGGTAGTGC 59.904 41.667 0.00 0.00 0.00 4.40
2604 4926 3.064820 ACAAAGTTTCAAGTGGTAGTGCG 59.935 43.478 0.00 0.00 0.00 5.34
2673 4995 2.092753 GGATTCTCCTTCAGGTGCATGA 60.093 50.000 0.00 0.00 36.34 3.07
2681 5003 3.763360 CCTTCAGGTGCATGATTTGGTTA 59.237 43.478 0.00 0.00 0.00 2.85
2700 5022 4.225984 GTTACAGATTGCGTGCATTGAAA 58.774 39.130 0.00 0.00 0.00 2.69
2701 5023 3.581024 ACAGATTGCGTGCATTGAAAT 57.419 38.095 0.00 0.00 0.00 2.17
2702 5024 3.247442 ACAGATTGCGTGCATTGAAATG 58.753 40.909 0.00 0.00 39.40 2.32
2703 5025 2.601314 CAGATTGCGTGCATTGAAATGG 59.399 45.455 5.25 0.00 36.90 3.16
2704 5026 1.325338 GATTGCGTGCATTGAAATGGC 59.675 47.619 5.25 1.35 36.90 4.40
2705 5027 0.669932 TTGCGTGCATTGAAATGGCC 60.670 50.000 0.00 0.00 36.90 5.36
2706 5028 2.160221 GCGTGCATTGAAATGGCCG 61.160 57.895 0.00 5.19 36.90 6.13
2707 5029 2.160221 CGTGCATTGAAATGGCCGC 61.160 57.895 0.00 0.00 36.90 6.53
2708 5030 1.079956 GTGCATTGAAATGGCCGCA 60.080 52.632 0.00 0.00 36.90 5.69
2709 5031 0.460635 GTGCATTGAAATGGCCGCAT 60.461 50.000 0.00 0.00 36.90 4.73
2710 5032 1.109609 TGCATTGAAATGGCCGCATA 58.890 45.000 0.00 0.00 36.90 3.14
2711 5033 1.202394 TGCATTGAAATGGCCGCATAC 60.202 47.619 0.00 0.00 36.90 2.39
2712 5034 1.869342 GCATTGAAATGGCCGCATACC 60.869 52.381 0.00 0.00 36.90 2.73
2713 5035 1.682854 CATTGAAATGGCCGCATACCT 59.317 47.619 0.00 0.00 32.78 3.08
2714 5036 1.102154 TTGAAATGGCCGCATACCTG 58.898 50.000 0.00 0.00 0.00 4.00
2715 5037 0.034574 TGAAATGGCCGCATACCTGT 60.035 50.000 0.00 0.00 0.00 4.00
2716 5038 1.210722 TGAAATGGCCGCATACCTGTA 59.789 47.619 0.00 0.00 0.00 2.74
2717 5039 1.602377 GAAATGGCCGCATACCTGTAC 59.398 52.381 0.00 0.00 0.00 2.90
2718 5040 0.837272 AATGGCCGCATACCTGTACT 59.163 50.000 0.00 0.00 0.00 2.73
2719 5041 1.712056 ATGGCCGCATACCTGTACTA 58.288 50.000 0.00 0.00 0.00 1.82
2720 5042 1.037493 TGGCCGCATACCTGTACTAG 58.963 55.000 0.00 0.00 0.00 2.57
2721 5043 1.325355 GGCCGCATACCTGTACTAGA 58.675 55.000 0.00 0.00 0.00 2.43
2722 5044 1.684983 GGCCGCATACCTGTACTAGAA 59.315 52.381 0.00 0.00 0.00 2.10
2723 5045 2.101917 GGCCGCATACCTGTACTAGAAA 59.898 50.000 0.00 0.00 0.00 2.52
2724 5046 3.431207 GGCCGCATACCTGTACTAGAAAA 60.431 47.826 0.00 0.00 0.00 2.29
2725 5047 4.186159 GCCGCATACCTGTACTAGAAAAA 58.814 43.478 0.00 0.00 0.00 1.94
2734 5056 5.013183 ACCTGTACTAGAAAAATGCACTCCT 59.987 40.000 0.00 0.00 0.00 3.69
2756 5078 9.747293 CTCCTGAGAGCACATATATATACAATG 57.253 37.037 0.00 5.68 32.13 2.82
2839 5161 5.032863 GGATCAAATTCAAGTTCGCATCAG 58.967 41.667 0.00 0.00 0.00 2.90
2856 5178 5.500290 CGCATCAGATTTTACTTGGTCGTAC 60.500 44.000 0.00 0.00 0.00 3.67
3027 5349 4.871933 TGGAGAAAAATTGCTTCTTCCC 57.128 40.909 6.44 4.70 33.24 3.97
3066 5388 7.340743 TGGGACGATGAAATTTGGTTTATGTAT 59.659 33.333 0.00 0.00 0.00 2.29
3164 5486 3.096852 TCGCCTACAGGAATCAGAAGAA 58.903 45.455 0.00 0.00 37.39 2.52
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 9.725019 CAGAACCACCATATCTAGCAATTTATA 57.275 33.333 0.00 0.00 0.00 0.98
1 2 8.439971 TCAGAACCACCATATCTAGCAATTTAT 58.560 33.333 0.00 0.00 0.00 1.40
2 3 7.801104 TCAGAACCACCATATCTAGCAATTTA 58.199 34.615 0.00 0.00 0.00 1.40
3 4 6.662755 TCAGAACCACCATATCTAGCAATTT 58.337 36.000 0.00 0.00 0.00 1.82
4 5 6.252599 TCAGAACCACCATATCTAGCAATT 57.747 37.500 0.00 0.00 0.00 2.32
5 6 5.221803 CCTCAGAACCACCATATCTAGCAAT 60.222 44.000 0.00 0.00 0.00 3.56
6 7 4.101585 CCTCAGAACCACCATATCTAGCAA 59.898 45.833 0.00 0.00 0.00 3.91
7 8 3.643320 CCTCAGAACCACCATATCTAGCA 59.357 47.826 0.00 0.00 0.00 3.49
8 9 3.898123 TCCTCAGAACCACCATATCTAGC 59.102 47.826 0.00 0.00 0.00 3.42
9 10 5.389520 TCTCCTCAGAACCACCATATCTAG 58.610 45.833 0.00 0.00 0.00 2.43
10 11 5.403558 TCTCCTCAGAACCACCATATCTA 57.596 43.478 0.00 0.00 0.00 1.98
11 12 4.271807 TCTCCTCAGAACCACCATATCT 57.728 45.455 0.00 0.00 0.00 1.98
12 13 5.104735 AGTTTCTCCTCAGAACCACCATATC 60.105 44.000 0.00 0.00 38.44 1.63
13 14 4.785376 AGTTTCTCCTCAGAACCACCATAT 59.215 41.667 0.00 0.00 38.44 1.78
14 15 4.020218 CAGTTTCTCCTCAGAACCACCATA 60.020 45.833 0.00 0.00 38.44 2.74
15 16 2.982488 AGTTTCTCCTCAGAACCACCAT 59.018 45.455 0.00 0.00 38.44 3.55
16 17 2.104792 CAGTTTCTCCTCAGAACCACCA 59.895 50.000 0.00 0.00 38.44 4.17
17 18 2.551071 CCAGTTTCTCCTCAGAACCACC 60.551 54.545 0.00 0.00 38.44 4.61
18 19 2.104963 ACCAGTTTCTCCTCAGAACCAC 59.895 50.000 0.00 0.00 38.44 4.16
19 20 2.408565 ACCAGTTTCTCCTCAGAACCA 58.591 47.619 0.00 0.00 38.44 3.67
20 21 3.493767 AACCAGTTTCTCCTCAGAACC 57.506 47.619 0.00 0.00 38.44 3.62
21 22 3.565902 CCAAACCAGTTTCTCCTCAGAAC 59.434 47.826 0.00 0.00 38.44 3.01
22 23 3.435026 CCCAAACCAGTTTCTCCTCAGAA 60.435 47.826 0.00 0.00 36.82 3.02
23 24 2.106511 CCCAAACCAGTTTCTCCTCAGA 59.893 50.000 0.00 0.00 0.00 3.27
24 25 2.158608 ACCCAAACCAGTTTCTCCTCAG 60.159 50.000 0.00 0.00 0.00 3.35
25 26 1.850345 ACCCAAACCAGTTTCTCCTCA 59.150 47.619 0.00 0.00 0.00 3.86
26 27 2.158667 TCACCCAAACCAGTTTCTCCTC 60.159 50.000 0.00 0.00 0.00 3.71
27 28 1.850345 TCACCCAAACCAGTTTCTCCT 59.150 47.619 0.00 0.00 0.00 3.69
28 29 2.358322 TCACCCAAACCAGTTTCTCC 57.642 50.000 0.00 0.00 0.00 3.71
29 30 4.556699 CGAAATCACCCAAACCAGTTTCTC 60.557 45.833 0.00 0.00 0.00 2.87
30 31 3.317993 CGAAATCACCCAAACCAGTTTCT 59.682 43.478 0.00 0.00 0.00 2.52
31 32 3.316868 TCGAAATCACCCAAACCAGTTTC 59.683 43.478 0.00 0.00 0.00 2.78
32 33 3.292460 TCGAAATCACCCAAACCAGTTT 58.708 40.909 0.00 0.00 0.00 2.66
33 34 2.938838 TCGAAATCACCCAAACCAGTT 58.061 42.857 0.00 0.00 0.00 3.16
34 35 2.649531 TCGAAATCACCCAAACCAGT 57.350 45.000 0.00 0.00 0.00 4.00
35 36 3.317993 AGTTTCGAAATCACCCAAACCAG 59.682 43.478 14.69 0.00 0.00 4.00
36 37 3.067461 CAGTTTCGAAATCACCCAAACCA 59.933 43.478 14.69 0.00 0.00 3.67
37 38 3.552068 CCAGTTTCGAAATCACCCAAACC 60.552 47.826 14.69 0.00 0.00 3.27
38 39 3.316868 TCCAGTTTCGAAATCACCCAAAC 59.683 43.478 14.69 0.00 0.00 2.93
39 40 3.316868 GTCCAGTTTCGAAATCACCCAAA 59.683 43.478 14.69 0.00 0.00 3.28
40 41 2.882137 GTCCAGTTTCGAAATCACCCAA 59.118 45.455 14.69 0.00 0.00 4.12
41 42 2.158740 TGTCCAGTTTCGAAATCACCCA 60.159 45.455 14.69 6.19 0.00 4.51
42 43 2.500229 TGTCCAGTTTCGAAATCACCC 58.500 47.619 14.69 0.27 0.00 4.61
43 44 3.813166 TCTTGTCCAGTTTCGAAATCACC 59.187 43.478 14.69 0.68 0.00 4.02
44 45 4.083802 CCTCTTGTCCAGTTTCGAAATCAC 60.084 45.833 14.69 8.84 0.00 3.06
45 46 4.065088 CCTCTTGTCCAGTTTCGAAATCA 58.935 43.478 14.69 6.28 0.00 2.57
46 47 4.315803 TCCTCTTGTCCAGTTTCGAAATC 58.684 43.478 14.69 8.00 0.00 2.17
47 48 4.351874 TCCTCTTGTCCAGTTTCGAAAT 57.648 40.909 14.69 0.45 0.00 2.17
48 49 3.830744 TCCTCTTGTCCAGTTTCGAAA 57.169 42.857 6.47 6.47 0.00 3.46
49 50 4.351874 AATCCTCTTGTCCAGTTTCGAA 57.648 40.909 0.00 0.00 0.00 3.71
50 51 4.282449 TGTAATCCTCTTGTCCAGTTTCGA 59.718 41.667 0.00 0.00 0.00 3.71
51 52 4.566004 TGTAATCCTCTTGTCCAGTTTCG 58.434 43.478 0.00 0.00 0.00 3.46
52 53 5.998363 ACTTGTAATCCTCTTGTCCAGTTTC 59.002 40.000 0.00 0.00 0.00 2.78
53 54 5.765182 CACTTGTAATCCTCTTGTCCAGTTT 59.235 40.000 0.00 0.00 0.00 2.66
54 55 5.308825 CACTTGTAATCCTCTTGTCCAGTT 58.691 41.667 0.00 0.00 0.00 3.16
55 56 4.804261 GCACTTGTAATCCTCTTGTCCAGT 60.804 45.833 0.00 0.00 0.00 4.00
56 57 3.686726 GCACTTGTAATCCTCTTGTCCAG 59.313 47.826 0.00 0.00 0.00 3.86
57 58 3.559171 GGCACTTGTAATCCTCTTGTCCA 60.559 47.826 0.00 0.00 0.00 4.02
58 59 3.010420 GGCACTTGTAATCCTCTTGTCC 58.990 50.000 0.00 0.00 0.00 4.02
59 60 3.944087 AGGCACTTGTAATCCTCTTGTC 58.056 45.455 0.00 0.00 27.25 3.18
60 61 5.013183 ACTTAGGCACTTGTAATCCTCTTGT 59.987 40.000 0.00 0.00 41.75 3.16
61 62 5.491982 ACTTAGGCACTTGTAATCCTCTTG 58.508 41.667 0.00 0.00 41.75 3.02
62 63 5.338463 GGACTTAGGCACTTGTAATCCTCTT 60.338 44.000 0.00 0.00 41.75 2.85
63 64 4.162509 GGACTTAGGCACTTGTAATCCTCT 59.837 45.833 0.00 0.00 41.75 3.69
64 65 4.162509 AGGACTTAGGCACTTGTAATCCTC 59.837 45.833 0.00 0.00 41.75 3.71
65 66 4.104831 AGGACTTAGGCACTTGTAATCCT 58.895 43.478 0.00 0.00 41.75 3.24
66 67 4.489306 AGGACTTAGGCACTTGTAATCC 57.511 45.455 0.00 0.00 41.75 3.01
67 68 5.803020 CAAGGACTTAGGCACTTGTAATC 57.197 43.478 7.76 0.00 41.75 1.75
72 73 4.894784 TCTTACAAGGACTTAGGCACTTG 58.105 43.478 12.57 12.57 44.32 3.16
73 74 5.562298 TTCTTACAAGGACTTAGGCACTT 57.438 39.130 0.00 0.00 41.75 3.16
74 75 5.763876 ATTCTTACAAGGACTTAGGCACT 57.236 39.130 0.00 0.00 46.37 4.40
75 76 6.819397 AAATTCTTACAAGGACTTAGGCAC 57.181 37.500 0.00 0.00 0.00 5.01
76 77 7.657336 CAAAAATTCTTACAAGGACTTAGGCA 58.343 34.615 0.00 0.00 0.00 4.75
77 78 6.586463 GCAAAAATTCTTACAAGGACTTAGGC 59.414 38.462 0.00 0.00 0.00 3.93
78 79 7.090808 GGCAAAAATTCTTACAAGGACTTAGG 58.909 38.462 0.00 0.00 0.00 2.69
79 80 7.657336 TGGCAAAAATTCTTACAAGGACTTAG 58.343 34.615 0.00 0.00 0.00 2.18
80 81 7.589958 TGGCAAAAATTCTTACAAGGACTTA 57.410 32.000 0.00 0.00 0.00 2.24
81 82 6.478512 TGGCAAAAATTCTTACAAGGACTT 57.521 33.333 0.00 0.00 0.00 3.01
82 83 5.509670 GCTGGCAAAAATTCTTACAAGGACT 60.510 40.000 0.00 0.00 0.00 3.85
83 84 4.686091 GCTGGCAAAAATTCTTACAAGGAC 59.314 41.667 0.00 0.00 0.00 3.85
84 85 4.343526 TGCTGGCAAAAATTCTTACAAGGA 59.656 37.500 0.00 0.00 0.00 3.36
85 86 4.630111 TGCTGGCAAAAATTCTTACAAGG 58.370 39.130 0.00 0.00 0.00 3.61
86 87 7.223387 GGATATGCTGGCAAAAATTCTTACAAG 59.777 37.037 0.00 0.00 0.00 3.16
87 88 7.041107 GGATATGCTGGCAAAAATTCTTACAA 58.959 34.615 0.00 0.00 0.00 2.41
88 89 6.154192 TGGATATGCTGGCAAAAATTCTTACA 59.846 34.615 0.00 0.00 0.00 2.41
89 90 6.572519 TGGATATGCTGGCAAAAATTCTTAC 58.427 36.000 0.00 0.00 0.00 2.34
90 91 6.788598 TGGATATGCTGGCAAAAATTCTTA 57.211 33.333 0.00 0.00 0.00 2.10
91 92 5.680594 TGGATATGCTGGCAAAAATTCTT 57.319 34.783 0.00 0.00 0.00 2.52
92 93 5.881923 ATGGATATGCTGGCAAAAATTCT 57.118 34.783 0.00 0.00 0.00 2.40
93 94 5.928264 GGTATGGATATGCTGGCAAAAATTC 59.072 40.000 0.00 0.00 0.00 2.17
94 95 5.509501 CGGTATGGATATGCTGGCAAAAATT 60.510 40.000 0.00 0.00 0.00 1.82
95 96 4.022068 CGGTATGGATATGCTGGCAAAAAT 60.022 41.667 0.00 0.00 0.00 1.82
96 97 3.317711 CGGTATGGATATGCTGGCAAAAA 59.682 43.478 0.00 0.00 0.00 1.94
97 98 2.884012 CGGTATGGATATGCTGGCAAAA 59.116 45.455 0.00 0.00 0.00 2.44
98 99 2.503331 CGGTATGGATATGCTGGCAAA 58.497 47.619 0.00 0.00 0.00 3.68
99 100 1.881925 GCGGTATGGATATGCTGGCAA 60.882 52.381 0.00 0.00 0.00 4.52
100 101 0.321564 GCGGTATGGATATGCTGGCA 60.322 55.000 0.00 0.00 0.00 4.92
101 102 1.026718 GGCGGTATGGATATGCTGGC 61.027 60.000 0.00 0.00 41.98 4.85
102 103 0.392998 GGGCGGTATGGATATGCTGG 60.393 60.000 0.00 0.00 0.00 4.85
103 104 0.740868 CGGGCGGTATGGATATGCTG 60.741 60.000 0.00 0.00 0.00 4.41
104 105 1.596934 CGGGCGGTATGGATATGCT 59.403 57.895 0.00 0.00 0.00 3.79
105 106 2.106683 GCGGGCGGTATGGATATGC 61.107 63.158 0.00 0.00 0.00 3.14
106 107 1.449601 GGCGGGCGGTATGGATATG 60.450 63.158 0.00 0.00 0.00 1.78
107 108 1.916273 TGGCGGGCGGTATGGATAT 60.916 57.895 0.00 0.00 0.00 1.63
108 109 2.524640 TGGCGGGCGGTATGGATA 60.525 61.111 0.00 0.00 0.00 2.59
109 110 4.250305 GTGGCGGGCGGTATGGAT 62.250 66.667 0.00 0.00 0.00 3.41
119 120 4.752879 CCCAGTACACGTGGCGGG 62.753 72.222 21.57 20.06 35.82 6.13
122 123 2.046314 ATGCCCAGTACACGTGGC 60.046 61.111 21.57 13.05 44.27 5.01
123 124 0.321210 TTGATGCCCAGTACACGTGG 60.321 55.000 21.57 1.07 34.52 4.94
124 125 0.796312 GTTGATGCCCAGTACACGTG 59.204 55.000 15.48 15.48 0.00 4.49
125 126 0.394938 TGTTGATGCCCAGTACACGT 59.605 50.000 0.00 0.00 0.00 4.49
126 127 1.078709 CTGTTGATGCCCAGTACACG 58.921 55.000 0.00 0.00 0.00 4.49
127 128 2.350522 CTCTGTTGATGCCCAGTACAC 58.649 52.381 0.00 0.00 0.00 2.90
128 129 1.339055 GCTCTGTTGATGCCCAGTACA 60.339 52.381 0.00 0.00 0.00 2.90
129 130 1.065854 AGCTCTGTTGATGCCCAGTAC 60.066 52.381 0.00 0.00 0.00 2.73
130 131 1.279496 AGCTCTGTTGATGCCCAGTA 58.721 50.000 0.00 0.00 0.00 2.74
131 132 1.209019 CTAGCTCTGTTGATGCCCAGT 59.791 52.381 0.00 0.00 0.00 4.00
132 133 1.474677 CCTAGCTCTGTTGATGCCCAG 60.475 57.143 0.00 0.00 0.00 4.45
133 134 0.543277 CCTAGCTCTGTTGATGCCCA 59.457 55.000 0.00 0.00 0.00 5.36
134 135 0.833287 TCCTAGCTCTGTTGATGCCC 59.167 55.000 0.00 0.00 0.00 5.36
135 136 1.484240 AGTCCTAGCTCTGTTGATGCC 59.516 52.381 0.00 0.00 0.00 4.40
136 137 2.548875 CAGTCCTAGCTCTGTTGATGC 58.451 52.381 0.00 0.00 0.00 3.91
137 138 2.093816 TGCAGTCCTAGCTCTGTTGATG 60.094 50.000 11.93 0.00 34.57 3.07
138 139 2.093764 GTGCAGTCCTAGCTCTGTTGAT 60.094 50.000 11.93 0.00 34.57 2.57
139 140 1.273606 GTGCAGTCCTAGCTCTGTTGA 59.726 52.381 11.93 0.00 34.57 3.18
140 141 1.274728 AGTGCAGTCCTAGCTCTGTTG 59.725 52.381 11.93 0.00 34.84 3.33
141 142 1.638529 AGTGCAGTCCTAGCTCTGTT 58.361 50.000 11.93 0.25 34.84 3.16
142 143 1.274728 CAAGTGCAGTCCTAGCTCTGT 59.725 52.381 0.00 0.00 36.13 3.41
145 146 2.028567 AGAACAAGTGCAGTCCTAGCTC 60.029 50.000 0.00 0.00 0.00 4.09
156 157 3.621268 TGCCACGAATATAGAACAAGTGC 59.379 43.478 0.00 0.00 0.00 4.40
171 172 4.209307 TGATACTAAAATGGTGCCACGA 57.791 40.909 0.00 0.00 0.00 4.35
174 175 6.604171 AGATGATGATACTAAAATGGTGCCA 58.396 36.000 0.00 0.00 0.00 4.92
210 211 4.772100 TGTTCATGACAGTGAGACCATCTA 59.228 41.667 0.00 0.00 33.40 1.98
211 212 3.580022 TGTTCATGACAGTGAGACCATCT 59.420 43.478 0.00 0.00 33.40 2.90
233 234 8.372031 GCAAATGCTCCACTGAAGTTAAAACTT 61.372 37.037 7.80 7.80 43.96 2.66
248 249 2.250031 ACTTCCATTGCAAATGCTCCA 58.750 42.857 1.71 0.00 42.66 3.86
257 258 7.818930 GGAAATAGAAAATGAACTTCCATTGCA 59.181 33.333 0.00 0.00 36.90 4.08
258 259 8.037166 AGGAAATAGAAAATGAACTTCCATTGC 58.963 33.333 0.00 0.00 36.90 3.56
259 260 9.362539 CAGGAAATAGAAAATGAACTTCCATTG 57.637 33.333 0.00 0.00 36.90 2.82
260 261 9.312904 TCAGGAAATAGAAAATGAACTTCCATT 57.687 29.630 0.00 0.00 38.30 3.16
289 290 4.069304 TGACAAGTATTTTTGGACGGAGG 58.931 43.478 0.00 0.00 32.32 4.30
290 291 5.411361 TGATGACAAGTATTTTTGGACGGAG 59.589 40.000 0.00 0.00 32.32 4.63
291 292 5.309638 TGATGACAAGTATTTTTGGACGGA 58.690 37.500 0.00 0.00 32.32 4.69
292 293 5.621197 TGATGACAAGTATTTTTGGACGG 57.379 39.130 0.00 0.00 32.32 4.79
293 294 7.922505 TTTTGATGACAAGTATTTTTGGACG 57.077 32.000 0.00 0.00 37.32 4.79
294 295 8.711457 CCATTTTGATGACAAGTATTTTTGGAC 58.289 33.333 0.00 0.00 37.32 4.02
295 296 8.646004 TCCATTTTGATGACAAGTATTTTTGGA 58.354 29.630 0.00 0.00 37.32 3.53
296 297 8.711457 GTCCATTTTGATGACAAGTATTTTTGG 58.289 33.333 0.00 0.00 37.32 3.28
297 298 9.258826 TGTCCATTTTGATGACAAGTATTTTTG 57.741 29.630 0.00 0.00 37.32 2.44
298 299 9.829507 TTGTCCATTTTGATGACAAGTATTTTT 57.170 25.926 0.00 0.00 37.32 1.94
299 300 9.829507 TTTGTCCATTTTGATGACAAGTATTTT 57.170 25.926 0.00 0.00 37.13 1.82
300 301 9.829507 TTTTGTCCATTTTGATGACAAGTATTT 57.170 25.926 0.00 0.00 37.13 1.40
301 302 9.829507 TTTTTGTCCATTTTGATGACAAGTATT 57.170 25.926 0.00 0.00 37.13 1.89
302 303 9.480053 CTTTTTGTCCATTTTGATGACAAGTAT 57.520 29.630 0.00 0.00 37.13 2.12
303 304 7.925483 CCTTTTTGTCCATTTTGATGACAAGTA 59.075 33.333 0.00 0.00 37.13 2.24
304 305 6.762661 CCTTTTTGTCCATTTTGATGACAAGT 59.237 34.615 0.00 0.00 37.13 3.16
305 306 6.203338 CCCTTTTTGTCCATTTTGATGACAAG 59.797 38.462 0.00 0.00 37.13 3.16
306 307 6.054295 CCCTTTTTGTCCATTTTGATGACAA 58.946 36.000 0.00 0.00 34.47 3.18
307 308 5.365025 TCCCTTTTTGTCCATTTTGATGACA 59.635 36.000 0.00 0.00 0.00 3.58
308 309 5.852827 TCCCTTTTTGTCCATTTTGATGAC 58.147 37.500 0.00 0.00 0.00 3.06
309 310 6.043012 ACATCCCTTTTTGTCCATTTTGATGA 59.957 34.615 0.00 0.00 32.39 2.92
310 311 6.232692 ACATCCCTTTTTGTCCATTTTGATG 58.767 36.000 0.00 0.00 33.80 3.07
311 312 6.438186 ACATCCCTTTTTGTCCATTTTGAT 57.562 33.333 0.00 0.00 0.00 2.57
312 313 5.885449 ACATCCCTTTTTGTCCATTTTGA 57.115 34.783 0.00 0.00 0.00 2.69
313 314 7.614494 AGATACATCCCTTTTTGTCCATTTTG 58.386 34.615 0.00 0.00 0.00 2.44
314 315 7.797121 AGATACATCCCTTTTTGTCCATTTT 57.203 32.000 0.00 0.00 0.00 1.82
315 316 8.336235 TCTAGATACATCCCTTTTTGTCCATTT 58.664 33.333 0.00 0.00 0.00 2.32
316 317 7.872138 TCTAGATACATCCCTTTTTGTCCATT 58.128 34.615 0.00 0.00 0.00 3.16
317 318 7.451731 TCTAGATACATCCCTTTTTGTCCAT 57.548 36.000 0.00 0.00 0.00 3.41
318 319 6.884472 TCTAGATACATCCCTTTTTGTCCA 57.116 37.500 0.00 0.00 0.00 4.02
319 320 7.281100 CAGTTCTAGATACATCCCTTTTTGTCC 59.719 40.741 0.00 0.00 0.00 4.02
320 321 8.041323 TCAGTTCTAGATACATCCCTTTTTGTC 58.959 37.037 0.00 0.00 0.00 3.18
321 322 7.918076 TCAGTTCTAGATACATCCCTTTTTGT 58.082 34.615 0.00 0.00 0.00 2.83
322 323 8.792830 TTCAGTTCTAGATACATCCCTTTTTG 57.207 34.615 0.00 0.00 0.00 2.44
323 324 9.981460 ATTTCAGTTCTAGATACATCCCTTTTT 57.019 29.630 0.00 0.00 0.00 1.94
326 327 9.213777 TGTATTTCAGTTCTAGATACATCCCTT 57.786 33.333 0.00 0.00 30.60 3.95
327 328 8.783660 TGTATTTCAGTTCTAGATACATCCCT 57.216 34.615 0.00 0.00 30.60 4.20
328 329 9.646427 GATGTATTTCAGTTCTAGATACATCCC 57.354 37.037 20.24 6.37 45.75 3.85
340 341 9.646427 GGGATGTATCTAGATGTATTTCAGTTC 57.354 37.037 15.79 0.00 0.00 3.01
341 342 8.598041 GGGGATGTATCTAGATGTATTTCAGTT 58.402 37.037 15.79 0.00 0.00 3.16
342 343 7.958583 AGGGGATGTATCTAGATGTATTTCAGT 59.041 37.037 15.79 0.00 0.00 3.41
343 344 8.372877 AGGGGATGTATCTAGATGTATTTCAG 57.627 38.462 15.79 0.00 0.00 3.02
344 345 8.742125 AAGGGGATGTATCTAGATGTATTTCA 57.258 34.615 15.79 5.50 0.00 2.69
350 351 9.170890 TGAATAAAAGGGGATGTATCTAGATGT 57.829 33.333 15.79 1.25 0.00 3.06
356 357 9.713684 TCAAAATGAATAAAAGGGGATGTATCT 57.286 29.630 0.00 0.00 0.00 1.98
359 360 9.486123 TCATCAAAATGAATAAAAGGGGATGTA 57.514 29.630 0.00 0.00 38.97 2.29
360 361 8.260114 GTCATCAAAATGAATAAAAGGGGATGT 58.740 33.333 0.00 0.00 43.42 3.06
361 362 8.259411 TGTCATCAAAATGAATAAAAGGGGATG 58.741 33.333 0.00 0.00 43.42 3.51
362 363 8.378115 TGTCATCAAAATGAATAAAAGGGGAT 57.622 30.769 0.00 0.00 43.42 3.85
363 364 7.789202 TGTCATCAAAATGAATAAAAGGGGA 57.211 32.000 0.00 0.00 43.42 4.81
364 365 8.096414 ACTTGTCATCAAAATGAATAAAAGGGG 58.904 33.333 0.00 0.00 43.42 4.79
372 373 7.975616 CCGGAAATACTTGTCATCAAAATGAAT 59.024 33.333 0.00 0.00 43.42 2.57
373 374 7.175816 TCCGGAAATACTTGTCATCAAAATGAA 59.824 33.333 0.00 0.00 43.42 2.57
374 375 6.657117 TCCGGAAATACTTGTCATCAAAATGA 59.343 34.615 0.00 0.00 39.63 2.57
375 376 6.747280 GTCCGGAAATACTTGTCATCAAAATG 59.253 38.462 5.23 0.00 32.87 2.32
376 377 6.403200 CGTCCGGAAATACTTGTCATCAAAAT 60.403 38.462 5.23 0.00 32.87 1.82
377 378 5.106869 CGTCCGGAAATACTTGTCATCAAAA 60.107 40.000 5.23 0.00 32.87 2.44
378 379 4.390603 CGTCCGGAAATACTTGTCATCAAA 59.609 41.667 5.23 0.00 32.87 2.69
379 380 3.930229 CGTCCGGAAATACTTGTCATCAA 59.070 43.478 5.23 0.00 0.00 2.57
380 381 3.517602 CGTCCGGAAATACTTGTCATCA 58.482 45.455 5.23 0.00 0.00 3.07
381 382 2.864343 CCGTCCGGAAATACTTGTCATC 59.136 50.000 5.23 0.00 37.50 2.92
382 383 2.498481 TCCGTCCGGAAATACTTGTCAT 59.502 45.455 5.23 0.00 42.05 3.06
383 384 1.894466 TCCGTCCGGAAATACTTGTCA 59.106 47.619 5.23 0.00 42.05 3.58
384 385 2.537401 CTCCGTCCGGAAATACTTGTC 58.463 52.381 5.23 0.00 44.66 3.18
385 386 1.206371 CCTCCGTCCGGAAATACTTGT 59.794 52.381 5.23 0.00 44.66 3.16
386 387 1.472728 CCCTCCGTCCGGAAATACTTG 60.473 57.143 5.23 0.00 44.66 3.16
387 388 0.828677 CCCTCCGTCCGGAAATACTT 59.171 55.000 5.23 0.00 44.66 2.24
388 389 0.032813 TCCCTCCGTCCGGAAATACT 60.033 55.000 5.23 0.00 44.66 2.12
389 390 0.388294 CTCCCTCCGTCCGGAAATAC 59.612 60.000 5.23 0.00 44.66 1.89
390 391 0.032813 ACTCCCTCCGTCCGGAAATA 60.033 55.000 5.23 0.00 44.66 1.40
391 392 0.032813 TACTCCCTCCGTCCGGAAAT 60.033 55.000 5.23 0.00 44.66 2.17
392 393 0.032813 ATACTCCCTCCGTCCGGAAA 60.033 55.000 5.23 0.00 44.66 3.13
393 394 0.846015 TATACTCCCTCCGTCCGGAA 59.154 55.000 5.23 0.00 44.66 4.30
394 395 0.846015 TTATACTCCCTCCGTCCGGA 59.154 55.000 0.00 0.00 42.90 5.14
395 396 0.957362 GTTATACTCCCTCCGTCCGG 59.043 60.000 0.00 0.00 0.00 5.14
396 397 1.878734 GAGTTATACTCCCTCCGTCCG 59.121 57.143 0.00 0.00 39.28 4.79
397 398 2.885894 CAGAGTTATACTCCCTCCGTCC 59.114 54.545 3.33 0.00 46.18 4.79
398 399 2.293955 GCAGAGTTATACTCCCTCCGTC 59.706 54.545 3.33 0.00 46.18 4.79
399 400 2.308690 GCAGAGTTATACTCCCTCCGT 58.691 52.381 3.33 0.00 46.18 4.69
400 401 1.614413 GGCAGAGTTATACTCCCTCCG 59.386 57.143 3.33 0.00 46.18 4.63
401 402 1.614413 CGGCAGAGTTATACTCCCTCC 59.386 57.143 3.33 2.40 46.18 4.30
402 403 2.554893 CTCGGCAGAGTTATACTCCCTC 59.445 54.545 5.61 0.00 46.18 4.30
403 404 2.175069 TCTCGGCAGAGTTATACTCCCT 59.825 50.000 13.75 0.00 46.18 4.20
404 405 2.584236 TCTCGGCAGAGTTATACTCCC 58.416 52.381 13.75 0.00 46.18 4.30
405 406 4.278669 TGATTCTCGGCAGAGTTATACTCC 59.721 45.833 13.75 0.00 46.18 3.85
406 407 5.440234 TGATTCTCGGCAGAGTTATACTC 57.560 43.478 13.75 0.00 45.38 2.59
407 408 5.854010 TTGATTCTCGGCAGAGTTATACT 57.146 39.130 13.75 0.00 44.65 2.12
408 409 7.307455 GGAATTTGATTCTCGGCAGAGTTATAC 60.307 40.741 13.75 3.69 44.65 1.47
409 410 6.706270 GGAATTTGATTCTCGGCAGAGTTATA 59.294 38.462 13.75 0.00 44.65 0.98
410 411 5.529060 GGAATTTGATTCTCGGCAGAGTTAT 59.471 40.000 13.75 8.57 44.65 1.89
427 428 4.763793 ACACTTGGACAGATGAGGAATTTG 59.236 41.667 0.00 0.00 0.00 2.32
494 495 4.895224 TGGACGACTCACACTATATCAC 57.105 45.455 0.00 0.00 0.00 3.06
495 496 4.261614 GCATGGACGACTCACACTATATCA 60.262 45.833 0.00 0.00 0.00 2.15
503 504 0.392706 ACTTGCATGGACGACTCACA 59.607 50.000 4.44 0.00 0.00 3.58
504 505 0.792640 CACTTGCATGGACGACTCAC 59.207 55.000 4.44 0.00 0.00 3.51
525 546 7.420330 GCAGTTCTAAACTTCTAATCCCCCTAT 60.420 40.741 0.00 0.00 40.46 2.57
526 547 6.126854 GCAGTTCTAAACTTCTAATCCCCCTA 60.127 42.308 0.00 0.00 40.46 3.53
534 555 7.088905 CGACTTAGGCAGTTCTAAACTTCTAA 58.911 38.462 9.85 9.85 40.46 2.10
535 556 6.208204 ACGACTTAGGCAGTTCTAAACTTCTA 59.792 38.462 0.00 0.00 40.46 2.10
536 557 5.010820 ACGACTTAGGCAGTTCTAAACTTCT 59.989 40.000 0.00 0.00 40.46 2.85
537 558 5.228665 ACGACTTAGGCAGTTCTAAACTTC 58.771 41.667 0.00 0.00 40.46 3.01
538 559 5.211174 ACGACTTAGGCAGTTCTAAACTT 57.789 39.130 0.00 0.00 40.46 2.66
539 560 4.868314 ACGACTTAGGCAGTTCTAAACT 57.132 40.909 0.00 0.00 44.06 2.66
540 561 4.986659 TGAACGACTTAGGCAGTTCTAAAC 59.013 41.667 18.16 0.38 42.29 2.01
541 562 5.010314 TCTGAACGACTTAGGCAGTTCTAAA 59.990 40.000 18.16 6.41 42.29 1.85
564 585 8.827677 ACACGGATATGCTAAAAATTTCTAGTC 58.172 33.333 0.70 0.00 0.00 2.59
565 586 8.732746 ACACGGATATGCTAAAAATTTCTAGT 57.267 30.769 0.70 0.00 0.00 2.57
566 587 9.438291 CAACACGGATATGCTAAAAATTTCTAG 57.562 33.333 0.00 0.00 0.00 2.43
567 588 7.913297 GCAACACGGATATGCTAAAAATTTCTA 59.087 33.333 0.00 0.00 37.12 2.10
568 589 6.751888 GCAACACGGATATGCTAAAAATTTCT 59.248 34.615 0.00 0.00 37.12 2.52
569 590 6.019881 GGCAACACGGATATGCTAAAAATTTC 60.020 38.462 0.00 0.00 39.94 2.17
571 594 5.348164 GGCAACACGGATATGCTAAAAATT 58.652 37.500 0.00 0.00 39.94 1.82
573 596 3.181505 CGGCAACACGGATATGCTAAAAA 60.182 43.478 0.00 0.00 39.94 1.94
577 600 0.878523 GCGGCAACACGGATATGCTA 60.879 55.000 0.00 0.00 39.94 3.49
580 603 1.523711 AGGCGGCAACACGGATATG 60.524 57.895 13.08 0.00 0.00 1.78
594 617 1.082117 GTGGATAACCGACACAGGCG 61.082 60.000 0.00 0.00 39.42 5.52
598 621 0.611200 CCCTGTGGATAACCGACACA 59.389 55.000 0.00 0.00 42.29 3.72
601 624 1.068741 CTAGCCCTGTGGATAACCGAC 59.931 57.143 0.00 0.00 39.42 4.79
603 626 1.410004 TCTAGCCCTGTGGATAACCG 58.590 55.000 0.00 0.00 39.42 4.44
610 633 2.125106 GCCGTTCTAGCCCTGTGG 60.125 66.667 0.00 0.00 0.00 4.17
611 634 1.448540 CTGCCGTTCTAGCCCTGTG 60.449 63.158 0.00 0.00 0.00 3.66
616 639 0.796927 GAACAACTGCCGTTCTAGCC 59.203 55.000 0.00 0.00 39.72 3.93
667 691 0.108615 CAGTGCCGCAAGCTACTACT 60.109 55.000 0.00 0.00 44.23 2.57
676 700 1.598882 TGACAATAACAGTGCCGCAA 58.401 45.000 0.00 0.00 0.00 4.85
680 704 8.839310 ATATAGAAGATGACAATAACAGTGCC 57.161 34.615 0.00 0.00 0.00 5.01
692 716 9.748708 GAGGCTCATCAATATATAGAAGATGAC 57.251 37.037 10.25 12.92 39.89 3.06
711 735 6.126796 TGGTTTCTACATGATAATGAGGCTCA 60.127 38.462 21.19 21.19 0.00 4.26
715 739 7.770433 TGAACTGGTTTCTACATGATAATGAGG 59.230 37.037 0.00 0.00 34.97 3.86
722 746 7.170965 ACAAGATGAACTGGTTTCTACATGAT 58.829 34.615 0.00 0.00 34.97 2.45
727 751 5.552178 AGGACAAGATGAACTGGTTTCTAC 58.448 41.667 0.00 0.00 32.12 2.59
734 758 7.225538 GTGTTATATGAGGACAAGATGAACTGG 59.774 40.741 0.00 0.00 0.00 4.00
759 783 5.885230 TTTGATTCGATTGATTCTGCAGT 57.115 34.783 14.67 0.00 0.00 4.40
812 837 9.337396 TGACTCACAAAGTAACATGTAAGAAAT 57.663 29.630 0.00 0.00 38.74 2.17
878 903 6.978674 AAATGTAGGTAGCATGCTAGTAGA 57.021 37.500 27.54 19.24 0.00 2.59
886 911 8.225603 ACTAAATGGAAAATGTAGGTAGCATG 57.774 34.615 0.00 0.00 0.00 4.06
913 938 4.196971 ACAGGCTAGAAACAAAACGAGTT 58.803 39.130 0.00 0.00 0.00 3.01
927 952 9.330063 TGAGTTGATAAATAAATGACAGGCTAG 57.670 33.333 0.00 0.00 0.00 3.42
979 1004 8.950210 CATCATGGTAAACTCTCTACAAAACAT 58.050 33.333 0.00 0.00 0.00 2.71
997 1022 1.001020 TCGGGCTTTGCATCATGGT 60.001 52.632 0.00 0.00 0.00 3.55
1108 1133 4.310740 ACATAGGATCCCAACAGAGGAAT 58.689 43.478 8.55 0.00 36.85 3.01
1125 1150 7.993821 AACAAACACAGATAGATCGACATAG 57.006 36.000 0.00 0.00 0.00 2.23
1159 1184 0.248458 AAAGCAACACGCCAAGAACG 60.248 50.000 0.00 0.00 44.04 3.95
1220 1245 1.761174 GGTTGGACAAGGAGAGGCA 59.239 57.895 0.00 0.00 0.00 4.75
1323 1348 2.223665 GCAGCAAAGGGATATGTTCTGC 60.224 50.000 0.00 0.00 38.81 4.26
1359 1384 5.650543 ACAAACCACATGTTCTCAAAAGTC 58.349 37.500 0.00 0.00 35.67 3.01
1434 1459 1.334059 GCACCAGTCAACACATCAACG 60.334 52.381 0.00 0.00 0.00 4.10
1446 1471 2.331809 GTGAAAATTCGGCACCAGTC 57.668 50.000 0.00 0.00 0.00 3.51
1479 1504 3.309954 AGAAGTCAAAGTCGCAACTCAAC 59.690 43.478 0.00 0.00 33.48 3.18
1526 1557 1.588082 CAGTTTGGTGATGCAGGGC 59.412 57.895 0.00 0.00 0.00 5.19
1567 1598 0.890683 GGCCAATCAAACAGGGAGTG 59.109 55.000 0.00 0.00 0.00 3.51
1568 1599 0.251787 GGGCCAATCAAACAGGGAGT 60.252 55.000 4.39 0.00 0.00 3.85
1741 1775 0.591170 ATGTCGTCCAAAAACCTGCG 59.409 50.000 0.00 0.00 0.00 5.18
1746 1780 0.671251 TGGCCATGTCGTCCAAAAAC 59.329 50.000 0.00 0.00 0.00 2.43
1749 1783 3.117657 TTTGGCCATGTCGTCCAAA 57.882 47.368 6.09 11.99 44.75 3.28
1751 1785 1.594194 GCATTTGGCCATGTCGTCCA 61.594 55.000 6.09 0.00 36.11 4.02
1778 1812 3.828921 TCACATACTACTAGCCATCGGT 58.171 45.455 0.00 0.00 0.00 4.69
1781 1818 6.332735 TGTCATCACATACTACTAGCCATC 57.667 41.667 0.00 0.00 0.00 3.51
1791 1828 5.349061 TGAGAAGCATGTCATCACATACT 57.651 39.130 0.00 0.00 41.69 2.12
1799 1836 4.645136 AGCAAATGATGAGAAGCATGTCAT 59.355 37.500 0.63 0.63 41.88 3.06
1815 1852 7.478322 ACAACAAGCTCTCATAATAGCAAATG 58.522 34.615 0.00 0.00 41.32 2.32
1816 1853 7.337689 TGACAACAAGCTCTCATAATAGCAAAT 59.662 33.333 0.00 0.00 41.32 2.32
1819 1856 5.733676 TGACAACAAGCTCTCATAATAGCA 58.266 37.500 0.00 0.00 41.32 3.49
1829 1866 4.453819 GTGCTTTAGATGACAACAAGCTCT 59.546 41.667 8.56 0.00 33.37 4.09
2019 4324 2.026636 AGGCTGAAAGTTATGGGCGTAA 60.027 45.455 0.00 0.00 35.30 3.18
2085 4390 0.698818 GATTGGGGTCAGTGGAAGGT 59.301 55.000 0.00 0.00 0.00 3.50
2257 4573 3.196254 ACCATGAAAATCAACCATCCAGC 59.804 43.478 0.00 0.00 0.00 4.85
2258 4574 4.382254 CCACCATGAAAATCAACCATCCAG 60.382 45.833 0.00 0.00 0.00 3.86
2338 4658 5.356751 TGCAAAAGCTTGAGTAAAAGTCTCA 59.643 36.000 0.00 0.00 39.71 3.27
2355 4675 4.448732 GGAATGGCAAACTAACTGCAAAAG 59.551 41.667 0.00 0.00 41.78 2.27
2360 4680 1.539827 ACGGAATGGCAAACTAACTGC 59.460 47.619 0.00 0.00 39.16 4.40
2370 4690 4.920640 TTAAACAGAAAACGGAATGGCA 57.079 36.364 0.00 0.00 0.00 4.92
2419 4739 8.635328 ACGTGGTACTTTTCTTAATGGAAAAAT 58.365 29.630 0.00 0.00 42.28 1.82
2420 4740 7.998580 ACGTGGTACTTTTCTTAATGGAAAAA 58.001 30.769 0.00 0.00 42.28 1.94
2425 4745 6.143278 GCAAAACGTGGTACTTTTCTTAATGG 59.857 38.462 0.00 0.00 0.00 3.16
2476 4796 3.726607 CATGCTGAACTAAGAGGCTAGG 58.273 50.000 0.00 0.00 0.00 3.02
2483 4803 1.275010 TCCGTGCATGCTGAACTAAGA 59.725 47.619 20.33 3.38 0.00 2.10
2520 4840 5.765182 ACTGATAAAAGGAACACACCTCTTG 59.235 40.000 0.00 0.00 39.62 3.02
2546 4868 2.100749 AGTTAAAAACAGCACACCTGCC 59.899 45.455 0.00 0.00 45.53 4.85
2547 4869 3.436700 AGTTAAAAACAGCACACCTGC 57.563 42.857 0.00 0.00 45.78 4.85
2562 4884 3.323691 TGTCAGCTCAGCCAAGTAGTTAA 59.676 43.478 0.00 0.00 0.00 2.01
2563 4885 2.897326 TGTCAGCTCAGCCAAGTAGTTA 59.103 45.455 0.00 0.00 0.00 2.24
2569 4891 1.602311 ACTTTGTCAGCTCAGCCAAG 58.398 50.000 0.00 0.00 0.00 3.61
2573 4895 3.065925 ACTTGAAACTTTGTCAGCTCAGC 59.934 43.478 0.00 0.00 0.00 4.26
2574 4896 4.497006 CCACTTGAAACTTTGTCAGCTCAG 60.497 45.833 0.00 0.00 0.00 3.35
2575 4897 3.378112 CCACTTGAAACTTTGTCAGCTCA 59.622 43.478 0.00 0.00 0.00 4.26
2578 4900 3.782889 ACCACTTGAAACTTTGTCAGC 57.217 42.857 0.00 0.00 0.00 4.26
2581 4903 4.598062 GCACTACCACTTGAAACTTTGTC 58.402 43.478 0.00 0.00 0.00 3.18
2586 4908 1.878953 CCGCACTACCACTTGAAACT 58.121 50.000 0.00 0.00 0.00 2.66
2587 4909 0.237498 GCCGCACTACCACTTGAAAC 59.763 55.000 0.00 0.00 0.00 2.78
2590 4912 1.764571 AAGGCCGCACTACCACTTGA 61.765 55.000 0.00 0.00 0.00 3.02
2591 4913 1.302511 AAGGCCGCACTACCACTTG 60.303 57.895 0.00 0.00 0.00 3.16
2592 4914 1.302511 CAAGGCCGCACTACCACTT 60.303 57.895 0.00 0.00 0.00 3.16
2593 4915 2.347490 CAAGGCCGCACTACCACT 59.653 61.111 0.00 0.00 0.00 4.00
2594 4916 2.032071 ACAAGGCCGCACTACCAC 59.968 61.111 0.00 0.00 0.00 4.16
2595 4917 2.031919 CACAAGGCCGCACTACCA 59.968 61.111 0.00 0.00 0.00 3.25
2596 4918 0.676782 ATTCACAAGGCCGCACTACC 60.677 55.000 0.00 0.00 0.00 3.18
2597 4919 1.165270 AATTCACAAGGCCGCACTAC 58.835 50.000 0.00 0.00 0.00 2.73
2598 4920 2.772077 TAATTCACAAGGCCGCACTA 57.228 45.000 0.00 0.00 0.00 2.74
2599 4921 1.904287 TTAATTCACAAGGCCGCACT 58.096 45.000 0.00 0.00 0.00 4.40
2600 4922 2.163412 TGATTAATTCACAAGGCCGCAC 59.837 45.455 0.00 0.00 0.00 5.34
2601 4923 2.441410 TGATTAATTCACAAGGCCGCA 58.559 42.857 0.00 0.00 0.00 5.69
2602 4924 3.438360 CTTGATTAATTCACAAGGCCGC 58.562 45.455 0.00 0.00 37.80 6.53
2659 4981 2.173519 ACCAAATCATGCACCTGAAGG 58.826 47.619 0.00 0.00 42.17 3.46
2673 4995 2.556189 TGCACGCAATCTGTAACCAAAT 59.444 40.909 0.00 0.00 0.00 2.32
2681 5003 3.247442 CATTTCAATGCACGCAATCTGT 58.753 40.909 0.00 0.00 0.00 3.41
2700 5022 1.618837 CTAGTACAGGTATGCGGCCAT 59.381 52.381 2.24 0.00 35.44 4.40
2701 5023 1.037493 CTAGTACAGGTATGCGGCCA 58.963 55.000 2.24 0.00 0.00 5.36
2702 5024 1.325355 TCTAGTACAGGTATGCGGCC 58.675 55.000 0.00 0.00 0.00 6.13
2703 5025 3.447918 TTTCTAGTACAGGTATGCGGC 57.552 47.619 0.00 0.00 0.00 6.53
2704 5026 5.277345 GCATTTTTCTAGTACAGGTATGCGG 60.277 44.000 0.00 0.00 0.00 5.69
2705 5027 5.293324 TGCATTTTTCTAGTACAGGTATGCG 59.707 40.000 0.00 0.00 33.37 4.73
2706 5028 6.316390 AGTGCATTTTTCTAGTACAGGTATGC 59.684 38.462 0.00 0.00 0.00 3.14
2707 5029 7.011482 GGAGTGCATTTTTCTAGTACAGGTATG 59.989 40.741 0.00 0.00 0.00 2.39
2708 5030 7.048512 GGAGTGCATTTTTCTAGTACAGGTAT 58.951 38.462 0.00 0.00 0.00 2.73
2709 5031 6.212791 AGGAGTGCATTTTTCTAGTACAGGTA 59.787 38.462 0.00 0.00 0.00 3.08
2710 5032 5.013183 AGGAGTGCATTTTTCTAGTACAGGT 59.987 40.000 0.00 0.00 0.00 4.00
2711 5033 5.352569 CAGGAGTGCATTTTTCTAGTACAGG 59.647 44.000 0.00 0.00 0.00 4.00
2712 5034 6.166279 TCAGGAGTGCATTTTTCTAGTACAG 58.834 40.000 0.00 0.00 0.00 2.74
2713 5035 6.014584 TCTCAGGAGTGCATTTTTCTAGTACA 60.015 38.462 0.00 0.00 0.00 2.90
2714 5036 6.398918 TCTCAGGAGTGCATTTTTCTAGTAC 58.601 40.000 0.00 0.00 0.00 2.73
2715 5037 6.605471 TCTCAGGAGTGCATTTTTCTAGTA 57.395 37.500 0.00 0.00 0.00 1.82
2716 5038 5.486526 CTCTCAGGAGTGCATTTTTCTAGT 58.513 41.667 0.00 0.00 35.03 2.57
2717 5039 4.332268 GCTCTCAGGAGTGCATTTTTCTAG 59.668 45.833 16.09 0.00 44.66 2.43
2718 5040 4.256920 GCTCTCAGGAGTGCATTTTTCTA 58.743 43.478 16.09 0.00 44.66 2.10
2719 5041 3.080319 GCTCTCAGGAGTGCATTTTTCT 58.920 45.455 16.09 0.00 44.66 2.52
2720 5042 3.484334 GCTCTCAGGAGTGCATTTTTC 57.516 47.619 16.09 0.00 44.66 2.29
2734 5056 7.402941 ACCCCATTGTATATATATGTGCTCTCA 59.597 37.037 5.44 0.00 0.00 3.27
2756 5078 1.296002 ATACTCCACCCAAGAACCCC 58.704 55.000 0.00 0.00 0.00 4.95
2809 5131 6.020360 GCGAACTTGAATTTGATCCATTTAGC 60.020 38.462 0.00 0.00 0.00 3.09
2856 5178 4.487714 TTACTGCTATTCACCTTCCTGG 57.512 45.455 0.00 0.00 42.93 4.45
3027 5349 2.041922 TCCCAGGATCACTCGGGG 60.042 66.667 7.81 4.21 37.82 5.73
3032 5354 1.866015 TTCATCGTCCCAGGATCACT 58.134 50.000 0.00 0.00 0.00 3.41
3079 5401 8.704668 TCATACTGCACCAGAATTATCTTTAGA 58.295 33.333 0.00 0.00 35.18 2.10


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.